HEADER TRANSCRIPTION 30-AUG-18 6HIL TITLE X-RAY STRUCTURE OF TEAD1(Y421H MUTANT) COMPLEXED WITH YAP(WILDTYPE): TITLE 2 MOLECULAR AND STRUCTURAL CHARACTERIZATION OF A TEAD MUTATION AT THE TITLE 3 ORIGIN OF SVEINSSON'S CHORIORETINAL ATROPHY COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTIONAL ENHANCER FACTOR TEF-1; COMPND 3 CHAIN: A, D, B, C; COMPND 4 FRAGMENT: C-TERMINAL DOMAIN, YAP BINDING DOMAIN; COMPND 5 SYNONYM: NTEF-1,PROTEIN GT-IIC,TEA DOMAIN FAMILY MEMBER 1,TEAD-1, COMPND 6 TRANSCRIPTION FACTOR 13,TCF-13; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: TRANSCRIPTIONAL COACTIVATOR YAP1; COMPND 10 CHAIN: L, O, M, N; COMPND 11 SYNONYM: YES-ASSOCIATED PROTEIN 1,PROTEIN YORKIE HOMOLOG,YES- COMPND 12 ASSOCIATED PROTEIN YAP65 HOMOLOG SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TEAD1, TCF13, TEF1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28-DERIVED VECTOR; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606 KEYWDS OTHER, TRANSCRIPTION FACTOR, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR J.KALLEN REVDAT 4 17-JAN-24 6HIL 1 REMARK REVDAT 3 04-MAR-20 6HIL 1 REMARK REVDAT 2 26-JUN-19 6HIL 1 JRNL REVDAT 1 03-APR-19 6HIL 0 JRNL AUTH F.BOKHOVCHUK,Y.MESROUZE,A.IZAAC,M.MEYERHOFER,C.ZIMMERMANN, JRNL AUTH 2 P.FONTANA,T.SCHMELZLE,D.ERDMANN,P.FURET,J.KALLEN,P.CHENE JRNL TITL MOLECULAR AND STRUCTURAL CHARACTERIZATION OF A TEAD MUTATION JRNL TITL 2 AT THE ORIGIN OF SVEINSSON'S CHORIORETINAL ATROPHY. JRNL REF FEBS J. V. 286 2381 2019 JRNL REFN ISSN 1742-464X JRNL PMID 30903741 JRNL DOI 10.1111/FEBS.14817 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.90 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 3 NUMBER OF REFLECTIONS : 39530 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.244 REMARK 3 R VALUE (WORKING SET) : 0.243 REMARK 3 FREE R VALUE : 0.267 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2081 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7720 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 64 REMARK 3 SOLVENT ATOMS : 140 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 51.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.85 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.57000 REMARK 3 B22 (A**2) : 2.06000 REMARK 3 B33 (A**2) : -3.09000 REMARK 3 B12 (A**2) : -2.60000 REMARK 3 B13 (A**2) : -0.05000 REMARK 3 B23 (A**2) : 0.30000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.594 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.286 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.250 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.755 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : NULL ; NULL REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6HIL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-AUG-18. REMARK 100 THE DEPOSITION ID IS D_1200011725. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-APR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41611 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 19.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 200 DATA REDUNDANCY : 1.800 REMARK 200 R MERGE (I) : 0.04600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.36 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.4 REMARK 200 DATA REDUNDANCY IN SHELL : 1.80 REMARK 200 R MERGE FOR SHELL (I) : 0.56800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3KYS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22% (W/V) PEG3350, 0.2M NA MALONATE, REMARK 280 PH 5.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2880 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12580 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, O REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12630 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, M REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, N REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 193 REMARK 465 ARG A 194 REMARK 465 SER A 195 REMARK 465 HIS A 229 REMARK 465 ALA A 230 REMARK 465 ASN A 231 REMARK 465 HIS A 232 REMARK 465 SER A 233 REMARK 465 TYR A 234 REMARK 465 SER A 235 REMARK 465 ASP A 236 REMARK 465 PRO A 237 REMARK 465 LEU A 238 REMARK 465 GLN A 284 REMARK 465 ASP A 285 REMARK 465 ASP A 286 REMARK 465 ASP L 60 REMARK 465 SER L 61 REMARK 465 GLU L 62 REMARK 465 THR L 63 REMARK 465 PRO L 99 REMARK 465 GLU L 100 REMARK 465 GLY D 193 REMARK 465 ARG D 194 REMARK 465 SER D 195 REMARK 465 HIS D 229 REMARK 465 ALA D 230 REMARK 465 ASN D 231 REMARK 465 HIS D 232 REMARK 465 SER D 233 REMARK 465 TYR D 234 REMARK 465 SER D 235 REMARK 465 ASP D 236 REMARK 465 PRO D 237 REMARK 465 GLN D 284 REMARK 465 ASP D 285 REMARK 465 ASP D 286 REMARK 465 ASP O 60 REMARK 465 SER O 61 REMARK 465 GLU O 62 REMARK 465 THR O 63 REMARK 465 PRO O 99 REMARK 465 GLU O 100 REMARK 465 GLY B 193 REMARK 465 ARG B 194 REMARK 465 SER B 195 REMARK 465 HIS B 229 REMARK 465 ALA B 230 REMARK 465 ASN B 231 REMARK 465 HIS B 232 REMARK 465 SER B 233 REMARK 465 TYR B 234 REMARK 465 SER B 235 REMARK 465 ASP B 236 REMARK 465 PRO B 237 REMARK 465 GLN B 284 REMARK 465 ASP B 285 REMARK 465 ASP B 286 REMARK 465 ASP M 60 REMARK 465 SER M 61 REMARK 465 GLU M 62 REMARK 465 THR M 63 REMARK 465 PRO M 99 REMARK 465 GLU M 100 REMARK 465 GLY C 193 REMARK 465 ARG C 194 REMARK 465 SER C 195 REMARK 465 HIS C 229 REMARK 465 ALA C 230 REMARK 465 ASN C 231 REMARK 465 HIS C 232 REMARK 465 SER C 233 REMARK 465 TYR C 234 REMARK 465 SER C 235 REMARK 465 ASP C 236 REMARK 465 PRO C 237 REMARK 465 GLN C 284 REMARK 465 ASP C 285 REMARK 465 ASP C 286 REMARK 465 ASP N 60 REMARK 465 SER N 61 REMARK 465 GLU N 62 REMARK 465 THR N 63 REMARK 465 PRO N 99 REMARK 465 GLU N 100 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 198 -157.73 -94.91 REMARK 500 ARG A 214 -81.89 -67.43 REMARK 500 PRO A 216 -6.42 -57.83 REMARK 500 GLN A 246 -9.30 -59.96 REMARK 500 LYS A 254 -164.46 -68.17 REMARK 500 LYS A 255 107.75 -59.12 REMARK 500 ASN A 282 -78.31 -70.03 REMARK 500 LYS A 360 36.40 -89.55 REMARK 500 GLN A 382 21.30 81.76 REMARK 500 PRO L 92 151.42 -49.92 REMARK 500 ARG D 214 -70.22 -77.12 REMARK 500 LEU D 239 -167.48 -106.81 REMARK 500 LYS D 254 -143.47 -90.98 REMARK 500 PRO O 92 153.93 -46.04 REMARK 500 THR B 198 -133.42 -80.01 REMARK 500 LYS B 254 -153.13 -74.49 REMARK 500 GLN B 382 6.27 88.33 REMARK 500 PRO M 75 4.26 -69.31 REMARK 500 THR C 198 -150.72 -98.67 REMARK 500 LEU C 239 -164.76 -102.20 REMARK 500 LYS C 254 -139.68 -76.47 REMARK 500 ASN C 378 99.15 -63.13 REMARK 500 ARG C 379 -9.06 -56.98 REMARK 500 ASN N 79 74.44 -119.06 REMARK 500 PRO N 92 148.81 -38.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MYR A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MYR D 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MYR B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MYR C 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6HIK RELATED DB: PDB DBREF 6HIL A 193 410 UNP P28347 TEAD1_HUMAN 208 425 DBREF 6HIL L 60 100 UNP P46937 YAP1_HUMAN 60 100 DBREF 6HIL D 193 410 UNP P28347 TEAD1_HUMAN 208 425 DBREF 6HIL O 60 100 UNP P46937 YAP1_HUMAN 60 100 DBREF 6HIL B 193 410 UNP P28347 TEAD1_HUMAN 208 425 DBREF 6HIL M 60 100 UNP P46937 YAP1_HUMAN 60 100 DBREF 6HIL C 193 410 UNP P28347 TEAD1_HUMAN 208 425 DBREF 6HIL N 60 100 UNP P46937 YAP1_HUMAN 60 100 SEQADV 6HIL HIS A 406 UNP P28347 TYR 421 ENGINEERED MUTATION SEQADV 6HIL HIS D 406 UNP P28347 TYR 421 ENGINEERED MUTATION SEQADV 6HIL HIS B 406 UNP P28347 TYR 421 ENGINEERED MUTATION SEQADV 6HIL HIS C 406 UNP P28347 TYR 421 ENGINEERED MUTATION SEQRES 1 A 218 GLY ARG SER ILE GLY THR THR LYS LEU ARG LEU VAL GLU SEQRES 2 A 218 PHE SER ALA PHE LEU GLU GLN GLN ARG ASP PRO ASP SER SEQRES 3 A 218 TYR ASN LYS HIS LEU PHE VAL HIS ILE GLY HIS ALA ASN SEQRES 4 A 218 HIS SER TYR SER ASP PRO LEU LEU GLU SER VAL ASP ILE SEQRES 5 A 218 ARG GLN ILE TYR ASP LYS PHE PRO GLU LYS LYS GLY GLY SEQRES 6 A 218 LEU LYS GLU LEU PHE GLY LYS GLY PRO GLN ASN ALA PHE SEQRES 7 A 218 PHE LEU VAL LYS PHE TRP ALA ASP LEU ASN CYS ASN ILE SEQRES 8 A 218 GLN ASP ASP ALA GLY ALA PHE TYR GLY VAL THR SER GLN SEQRES 9 A 218 TYR GLU SER SER GLU ASN MET THR VAL THR CYS SER THR SEQRES 10 A 218 LYS VAL CYS SER PHE GLY LYS GLN VAL VAL GLU LYS VAL SEQRES 11 A 218 GLU THR GLU TYR ALA ARG PHE GLU ASN GLY ARG PHE VAL SEQRES 12 A 218 TYR ARG ILE ASN ARG SER PRO MET CYS GLU TYR MET ILE SEQRES 13 A 218 ASN PHE ILE HIS LYS LEU LYS HIS LEU PRO GLU LYS TYR SEQRES 14 A 218 MET MET ASN SER VAL LEU GLU ASN PHE THR ILE LEU LEU SEQRES 15 A 218 VAL VAL THR ASN ARG ASP THR GLN GLU THR LEU LEU CYS SEQRES 16 A 218 MET ALA CYS VAL PHE GLU VAL SER ASN SER GLU HIS GLY SEQRES 17 A 218 ALA GLN HIS HIS ILE HIS ARG LEU VAL LYS SEQRES 1 L 41 ASP SER GLU THR ASP LEU GLU ALA LEU PHE ASN ALA VAL SEQRES 2 L 41 MET ASN PRO LYS THR ALA ASN VAL PRO GLN THR VAL PRO SEQRES 3 L 41 MET ARG LEU ARG LYS LEU PRO ASP SER PHE PHE LYS PRO SEQRES 4 L 41 PRO GLU SEQRES 1 D 218 GLY ARG SER ILE GLY THR THR LYS LEU ARG LEU VAL GLU SEQRES 2 D 218 PHE SER ALA PHE LEU GLU GLN GLN ARG ASP PRO ASP SER SEQRES 3 D 218 TYR ASN LYS HIS LEU PHE VAL HIS ILE GLY HIS ALA ASN SEQRES 4 D 218 HIS SER TYR SER ASP PRO LEU LEU GLU SER VAL ASP ILE SEQRES 5 D 218 ARG GLN ILE TYR ASP LYS PHE PRO GLU LYS LYS GLY GLY SEQRES 6 D 218 LEU LYS GLU LEU PHE GLY LYS GLY PRO GLN ASN ALA PHE SEQRES 7 D 218 PHE LEU VAL LYS PHE TRP ALA ASP LEU ASN CYS ASN ILE SEQRES 8 D 218 GLN ASP ASP ALA GLY ALA PHE TYR GLY VAL THR SER GLN SEQRES 9 D 218 TYR GLU SER SER GLU ASN MET THR VAL THR CYS SER THR SEQRES 10 D 218 LYS VAL CYS SER PHE GLY LYS GLN VAL VAL GLU LYS VAL SEQRES 11 D 218 GLU THR GLU TYR ALA ARG PHE GLU ASN GLY ARG PHE VAL SEQRES 12 D 218 TYR ARG ILE ASN ARG SER PRO MET CYS GLU TYR MET ILE SEQRES 13 D 218 ASN PHE ILE HIS LYS LEU LYS HIS LEU PRO GLU LYS TYR SEQRES 14 D 218 MET MET ASN SER VAL LEU GLU ASN PHE THR ILE LEU LEU SEQRES 15 D 218 VAL VAL THR ASN ARG ASP THR GLN GLU THR LEU LEU CYS SEQRES 16 D 218 MET ALA CYS VAL PHE GLU VAL SER ASN SER GLU HIS GLY SEQRES 17 D 218 ALA GLN HIS HIS ILE HIS ARG LEU VAL LYS SEQRES 1 O 41 ASP SER GLU THR ASP LEU GLU ALA LEU PHE ASN ALA VAL SEQRES 2 O 41 MET ASN PRO LYS THR ALA ASN VAL PRO GLN THR VAL PRO SEQRES 3 O 41 MET ARG LEU ARG LYS LEU PRO ASP SER PHE PHE LYS PRO SEQRES 4 O 41 PRO GLU SEQRES 1 B 218 GLY ARG SER ILE GLY THR THR LYS LEU ARG LEU VAL GLU SEQRES 2 B 218 PHE SER ALA PHE LEU GLU GLN GLN ARG ASP PRO ASP SER SEQRES 3 B 218 TYR ASN LYS HIS LEU PHE VAL HIS ILE GLY HIS ALA ASN SEQRES 4 B 218 HIS SER TYR SER ASP PRO LEU LEU GLU SER VAL ASP ILE SEQRES 5 B 218 ARG GLN ILE TYR ASP LYS PHE PRO GLU LYS LYS GLY GLY SEQRES 6 B 218 LEU LYS GLU LEU PHE GLY LYS GLY PRO GLN ASN ALA PHE SEQRES 7 B 218 PHE LEU VAL LYS PHE TRP ALA ASP LEU ASN CYS ASN ILE SEQRES 8 B 218 GLN ASP ASP ALA GLY ALA PHE TYR GLY VAL THR SER GLN SEQRES 9 B 218 TYR GLU SER SER GLU ASN MET THR VAL THR CYS SER THR SEQRES 10 B 218 LYS VAL CYS SER PHE GLY LYS GLN VAL VAL GLU LYS VAL SEQRES 11 B 218 GLU THR GLU TYR ALA ARG PHE GLU ASN GLY ARG PHE VAL SEQRES 12 B 218 TYR ARG ILE ASN ARG SER PRO MET CYS GLU TYR MET ILE SEQRES 13 B 218 ASN PHE ILE HIS LYS LEU LYS HIS LEU PRO GLU LYS TYR SEQRES 14 B 218 MET MET ASN SER VAL LEU GLU ASN PHE THR ILE LEU LEU SEQRES 15 B 218 VAL VAL THR ASN ARG ASP THR GLN GLU THR LEU LEU CYS SEQRES 16 B 218 MET ALA CYS VAL PHE GLU VAL SER ASN SER GLU HIS GLY SEQRES 17 B 218 ALA GLN HIS HIS ILE HIS ARG LEU VAL LYS SEQRES 1 M 41 ASP SER GLU THR ASP LEU GLU ALA LEU PHE ASN ALA VAL SEQRES 2 M 41 MET ASN PRO LYS THR ALA ASN VAL PRO GLN THR VAL PRO SEQRES 3 M 41 MET ARG LEU ARG LYS LEU PRO ASP SER PHE PHE LYS PRO SEQRES 4 M 41 PRO GLU SEQRES 1 C 218 GLY ARG SER ILE GLY THR THR LYS LEU ARG LEU VAL GLU SEQRES 2 C 218 PHE SER ALA PHE LEU GLU GLN GLN ARG ASP PRO ASP SER SEQRES 3 C 218 TYR ASN LYS HIS LEU PHE VAL HIS ILE GLY HIS ALA ASN SEQRES 4 C 218 HIS SER TYR SER ASP PRO LEU LEU GLU SER VAL ASP ILE SEQRES 5 C 218 ARG GLN ILE TYR ASP LYS PHE PRO GLU LYS LYS GLY GLY SEQRES 6 C 218 LEU LYS GLU LEU PHE GLY LYS GLY PRO GLN ASN ALA PHE SEQRES 7 C 218 PHE LEU VAL LYS PHE TRP ALA ASP LEU ASN CYS ASN ILE SEQRES 8 C 218 GLN ASP ASP ALA GLY ALA PHE TYR GLY VAL THR SER GLN SEQRES 9 C 218 TYR GLU SER SER GLU ASN MET THR VAL THR CYS SER THR SEQRES 10 C 218 LYS VAL CYS SER PHE GLY LYS GLN VAL VAL GLU LYS VAL SEQRES 11 C 218 GLU THR GLU TYR ALA ARG PHE GLU ASN GLY ARG PHE VAL SEQRES 12 C 218 TYR ARG ILE ASN ARG SER PRO MET CYS GLU TYR MET ILE SEQRES 13 C 218 ASN PHE ILE HIS LYS LEU LYS HIS LEU PRO GLU LYS TYR SEQRES 14 C 218 MET MET ASN SER VAL LEU GLU ASN PHE THR ILE LEU LEU SEQRES 15 C 218 VAL VAL THR ASN ARG ASP THR GLN GLU THR LEU LEU CYS SEQRES 16 C 218 MET ALA CYS VAL PHE GLU VAL SER ASN SER GLU HIS GLY SEQRES 17 C 218 ALA GLN HIS HIS ILE HIS ARG LEU VAL LYS SEQRES 1 N 41 ASP SER GLU THR ASP LEU GLU ALA LEU PHE ASN ALA VAL SEQRES 2 N 41 MET ASN PRO LYS THR ALA ASN VAL PRO GLN THR VAL PRO SEQRES 3 N 41 MET ARG LEU ARG LYS LEU PRO ASP SER PHE PHE LYS PRO SEQRES 4 N 41 PRO GLU HET MYR A 501 16 HET MYR D 501 16 HET MYR B 501 16 HET MYR C 501 16 HETNAM MYR MYRISTIC ACID FORMUL 9 MYR 4(C14 H28 O2) FORMUL 13 HOH *140(H2 O) HELIX 1 AA1 ARG A 245 PHE A 251 5 7 HELIX 2 AA2 GLY A 257 GLY A 265 1 9 HELIX 3 AA3 PRO A 266 ASN A 268 5 3 HELIX 4 AA4 CYS A 344 LEU A 357 1 14 HELIX 5 AA5 TYR A 361 GLU A 368 1 8 HELIX 6 AA6 LEU L 65 ASN L 74 1 10 HELIX 7 AA7 PRO L 85 ARG L 89 5 5 HELIX 8 AA8 PRO L 92 PHE L 96 5 5 HELIX 9 AA9 ARG D 245 PHE D 251 5 7 HELIX 10 AB1 GLY D 257 GLY D 265 1 9 HELIX 11 AB2 PRO D 266 ASN D 268 5 3 HELIX 12 AB3 CYS D 344 LEU D 357 1 14 HELIX 13 AB4 GLU D 359 GLU D 368 1 10 HELIX 14 AB5 LEU O 65 ASN O 74 1 10 HELIX 15 AB6 PRO O 75 ALA O 78 5 4 HELIX 16 AB7 PRO O 85 ARG O 89 5 5 HELIX 17 AB8 PRO O 92 LYS O 97 5 6 HELIX 18 AB9 ARG B 245 PHE B 251 5 7 HELIX 19 AC1 GLY B 257 GLY B 265 1 9 HELIX 20 AC2 PRO B 266 ASN B 268 5 3 HELIX 21 AC3 CYS B 344 HIS B 356 1 13 HELIX 22 AC4 GLU B 359 GLU B 368 1 10 HELIX 23 AC5 LEU M 65 ASN M 74 1 10 HELIX 24 AC6 PRO M 85 ARG M 89 5 5 HELIX 25 AC7 PRO M 92 PHE M 96 5 5 HELIX 26 AC8 ARG C 245 PHE C 251 5 7 HELIX 27 AC9 GLY C 257 GLY C 265 1 9 HELIX 28 AD1 PRO C 266 ASN C 268 5 3 HELIX 29 AD2 CYS C 344 HIS C 356 1 13 HELIX 30 AD3 TYR C 361 GLU C 368 1 8 HELIX 31 AD4 LEU N 65 ASN N 74 1 10 HELIX 32 AD5 PRO N 85 ARG N 89 5 5 HELIX 33 AD6 PRO N 92 LYS N 97 5 6 SHEET 1 AA1 5 TYR A 219 ILE A 227 0 SHEET 2 AA1 5 ARG A 202 GLN A 213 -1 N PHE A 206 O ILE A 227 SHEET 3 AA1 5 ALA A 289 SER A 299 -1 O GLN A 296 N VAL A 204 SHEET 4 AA1 5 ARG A 333 PRO A 342 -1 O PHE A 334 N SER A 299 SHEET 5 AA1 5 ARG A 328 GLU A 330 -1 N GLU A 330 O ARG A 333 SHEET 1 AA2 7 VAL A 242 ASP A 243 0 SHEET 2 AA2 7 GLN A 402 VAL A 409 1 O ARG A 407 N VAL A 242 SHEET 3 AA2 7 PHE A 270 ALA A 277 -1 N LEU A 272 O HIS A 406 SHEET 4 AA2 7 GLU A 383 VAL A 394 1 O GLU A 393 N ALA A 277 SHEET 5 AA2 7 PHE A 370 ASN A 378 -1 N LEU A 374 O MET A 388 SHEET 6 AA2 7 THR A 304 SER A 313 -1 N THR A 306 O THR A 377 SHEET 7 AA2 7 LYS A 316 TYR A 326 -1 O VAL A 318 N VAL A 311 SHEET 1 AA310 ARG D 328 GLU D 330 0 SHEET 2 AA310 ARG D 333 PRO D 342 -1 O ARG D 333 N GLU D 330 SHEET 3 AA310 GLY D 288 SER D 299 -1 N SER D 299 O PHE D 334 SHEET 4 AA310 ARG D 202 GLN D 213 -1 N VAL D 204 O GLN D 296 SHEET 5 AA310 SER D 218 ILE D 227 -1 O ASN D 220 N GLN D 212 SHEET 6 AA310 SER B 218 ILE B 227 -1 O LYS B 221 N TYR D 219 SHEET 7 AA310 ARG B 202 ASP B 215 -1 N GLN B 212 O ASN B 220 SHEET 8 AA310 ALA B 289 SER B 299 -1 O GLY B 292 N PHE B 209 SHEET 9 AA310 ARG B 333 PRO B 342 -1 O TYR B 336 N TYR B 297 SHEET 10 AA310 ARG B 328 GLU B 330 -1 N ARG B 328 O VAL B 335 SHEET 1 AA4 7 LEU D 239 ASP D 243 0 SHEET 2 AA4 7 GLN D 402 VAL D 409 1 O ARG D 407 N VAL D 242 SHEET 3 AA4 7 PHE D 270 ALA D 277 -1 N LEU D 272 O HIS D 406 SHEET 4 AA4 7 THR D 384 VAL D 394 1 O GLU D 393 N ALA D 277 SHEET 5 AA4 7 PHE D 370 ASN D 378 -1 N VAL D 376 O LEU D 385 SHEET 6 AA4 7 THR D 304 SER D 313 -1 N THR D 306 O THR D 377 SHEET 7 AA4 7 LYS D 316 TYR D 326 -1 O VAL D 318 N VAL D 311 SHEET 1 AA5 7 LEU B 239 ASP B 243 0 SHEET 2 AA5 7 GLN B 402 VAL B 409 1 O ILE B 405 N LEU B 239 SHEET 3 AA5 7 PHE B 270 ALA B 277 -1 N LEU B 272 O HIS B 406 SHEET 4 AA5 7 THR B 384 VAL B 394 1 O ALA B 389 N PHE B 271 SHEET 5 AA5 7 PHE B 370 ASN B 378 -1 N VAL B 376 O LEU B 386 SHEET 6 AA5 7 VAL B 305 SER B 313 -1 N THR B 306 O THR B 377 SHEET 7 AA5 7 LYS B 316 GLU B 325 -1 O VAL B 318 N VAL B 311 SHEET 1 AA6 5 SER C 218 ILE C 227 0 SHEET 2 AA6 5 ARG C 202 ASP C 215 -1 N PHE C 206 O ILE C 227 SHEET 3 AA6 5 GLY C 288 SER C 299 -1 O GLN C 296 N VAL C 204 SHEET 4 AA6 5 PHE C 334 PRO C 342 -1 O TYR C 336 N TYR C 297 SHEET 5 AA6 5 ARG C 328 PHE C 329 -1 N ARG C 328 O VAL C 335 SHEET 1 AA7 7 LEU C 239 ASP C 243 0 SHEET 2 AA7 7 GLN C 402 VAL C 409 1 O ILE C 405 N LEU C 239 SHEET 3 AA7 7 PHE C 270 ALA C 277 -1 N TRP C 276 O GLN C 402 SHEET 4 AA7 7 THR C 384 VAL C 394 1 O ALA C 389 N PHE C 271 SHEET 5 AA7 7 PHE C 370 ASN C 378 -1 N ILE C 372 O CYS C 390 SHEET 6 AA7 7 VAL C 305 SER C 313 -1 N THR C 306 O THR C 377 SHEET 7 AA7 7 LYS C 316 GLU C 325 -1 O VAL C 318 N VAL C 311 CISPEP 1 GLY A 265 PRO A 266 0 -8.51 CISPEP 2 GLY D 265 PRO D 266 0 -2.74 CISPEP 3 GLY B 265 PRO B 266 0 -3.18 CISPEP 4 GLY C 265 PRO C 266 0 -3.22 SITE 1 AC1 6 ALA A 208 VAL A 293 LYS A 321 MET A 343 SITE 2 AC1 6 CYS A 344 MET A 347 SITE 1 AC2 9 PHE D 224 VAL D 293 THR D 309 LYS D 321 SITE 2 AC2 9 MET D 343 CYS D 344 LEU D 367 PHE D 370 SITE 3 AC2 9 ILE D 372 SITE 1 AC3 8 ALA B 208 VAL B 293 LYS B 321 MET B 343 SITE 2 AC3 8 CYS B 344 MET B 347 LEU B 367 PHE B 392 SITE 1 AC4 9 ALA C 208 VAL C 293 LYS C 321 MET C 343 SITE 2 AC4 9 CYS C 344 MET C 347 LEU C 367 ILE C 372 SITE 3 AC4 9 PHE C 392 CRYST1 40.125 46.544 144.337 98.61 90.85 108.14 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024922 0.008166 0.001717 0.00000 SCALE2 0.000000 0.022609 0.003721 0.00000 SCALE3 0.000000 0.000000 0.007022 0.00000