HEADER ISOMERASE 03-SEP-18 6HJF TITLE TRYPANOSOMA CRUZI PROLINE RACEMASE IN COMPLEX WITH INHIBITOR BROXOPA COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROLINE RACEMASE A; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: TCPA45-A,TCPRACA,RTCPA45; COMPND 5 EC: 5.1.1.4; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRYPANOSOMA CRUZI (STRAIN CL BRENER); SOURCE 3 ORGANISM_TAXID: 353153; SOURCE 4 STRAIN: CL BRENER; SOURCE 5 GENE: PA45-A, TC00.1047053506795.80; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28B KEYWDS PROLINE RACEMASE, DRUG DESIGN, MICHAEL REACTION, SUICIDE SUBSTRATE, KEYWDS 2 ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR F.SAUL,A.HAOUZ,P.URIAC,A.BLONDEL,P.MINOPRIO REVDAT 2 17-JAN-24 6HJF 1 LINK REVDAT 1 07-NOV-18 6HJF 0 JRNL AUTH P.A.AMARAL,D.AUTHEMAN,G.D.DE MELO,N.GOUAULT,J.F.CUPIF, JRNL AUTH 2 S.GOYARD,P.DUTRA,N.COATNOAN,A.COSSON,D.MONET,F.SAUL,A.HAOUZ, JRNL AUTH 3 P.URIAC,A.BLONDEL,P.MINOPRIO JRNL TITL DESIGNED MONO- AND DI-COVALENT INHIBITORS TRAP MODELED JRNL TITL 2 FUNCTIONAL MOTIONS FOR TRYPANOSOMA CRUZI PROLINE RACEMASE IN JRNL TITL 3 CRYSTALLOGRAPHY. JRNL REF PLOS NEGL TROP DIS V. 12 06853 2018 JRNL REFN ESSN 1935-2735 JRNL PMID 30372428 JRNL DOI 10.1371/JOURNAL.PNTD.0006853 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.39 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 84997 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1741 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 40 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.72 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3050 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.17 REMARK 3 BIN R VALUE (WORKING SET) : 0.3280 REMARK 3 BIN FREE R VALUE SET COUNT : 68 REMARK 3 BIN FREE R VALUE : 0.4250 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5388 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 16 REMARK 3 SOLVENT ATOMS : 528 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.69000 REMARK 3 B22 (A**2) : -2.06000 REMARK 3 B33 (A**2) : -0.78000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.36000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.092 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.093 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.075 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.377 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.971 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.957 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5546 ; 0.010 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 5301 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7538 ; 1.401 ; 1.968 REMARK 3 BOND ANGLES OTHERS (DEGREES): 12208 ; 0.753 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 719 ; 6.394 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 238 ;36.923 ;24.538 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 906 ;13.787 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 30 ;10.343 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 858 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6370 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1228 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6HJF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-SEP-18. REMARK 100 THE DEPOSITION ID IS D_1200011715. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JUL-10 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 86740 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 42.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.05200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.67500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1W61 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.76 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M POTASSIUM PHOSPHATE DIBASIC 21% REMARK 280 (W/V) PEG-3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 64.83300 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.42050 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 64.83300 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 45.42050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3820 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26490 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 GLN A 3 REMARK 465 GLU A 4 REMARK 465 LYS A 5 REMARK 465 LEU A 6 REMARK 465 LEU A 7 REMARK 465 PHE A 8 REMARK 465 ASP A 9 REMARK 465 GLN A 10 REMARK 465 LYS A 11 REMARK 465 TYR A 12 REMARK 465 LYS A 13 REMARK 465 ILE A 14 REMARK 465 ILE A 15 REMARK 465 LYS A 16 REMARK 465 GLY A 17 REMARK 465 GLU A 18 REMARK 465 LYS A 19 REMARK 465 LYS A 20 REMARK 465 GLU A 21 REMARK 465 LYS A 22 REMARK 465 LYS A 23 REMARK 465 LYS A 24 REMARK 465 ASN A 25 REMARK 465 GLN A 26 REMARK 465 ARG A 27 REMARK 465 ALA A 28 REMARK 465 ASN A 29 REMARK 465 ARG A 30 REMARK 465 ARG A 31 REMARK 465 GLU A 32 REMARK 465 HIS A 33 REMARK 465 GLN A 34 REMARK 465 GLN A 35 REMARK 465 LYS A 36 REMARK 465 ARG A 37 REMARK 465 GLU A 38 REMARK 465 ILE A 39 REMARK 465 ILE A 395 REMARK 465 TRP A 396 REMARK 465 SER A 397 REMARK 465 SER A 398 REMARK 465 SER A 399 REMARK 465 VAL A 400 REMARK 465 ASP A 401 REMARK 465 LYS A 402 REMARK 465 LEU A 403 REMARK 465 ALA A 404 REMARK 465 ALA A 405 REMARK 465 ALA A 406 REMARK 465 LEU A 407 REMARK 465 GLU A 408 REMARK 465 HIS A 409 REMARK 465 HIS A 410 REMARK 465 HIS A 411 REMARK 465 HIS A 412 REMARK 465 HIS A 413 REMARK 465 HIS A 414 REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 GLN B 3 REMARK 465 GLU B 4 REMARK 465 LYS B 5 REMARK 465 LEU B 6 REMARK 465 LEU B 7 REMARK 465 PHE B 8 REMARK 465 ASP B 9 REMARK 465 GLN B 10 REMARK 465 LYS B 11 REMARK 465 TYR B 12 REMARK 465 LYS B 13 REMARK 465 ILE B 14 REMARK 465 ILE B 15 REMARK 465 LYS B 16 REMARK 465 GLY B 17 REMARK 465 GLU B 18 REMARK 465 LYS B 19 REMARK 465 LYS B 20 REMARK 465 GLU B 21 REMARK 465 LYS B 22 REMARK 465 LYS B 23 REMARK 465 LYS B 24 REMARK 465 ASN B 25 REMARK 465 GLN B 26 REMARK 465 ARG B 27 REMARK 465 ALA B 28 REMARK 465 ASN B 29 REMARK 465 ARG B 30 REMARK 465 ARG B 31 REMARK 465 GLU B 32 REMARK 465 HIS B 33 REMARK 465 GLN B 34 REMARK 465 GLN B 35 REMARK 465 LYS B 36 REMARK 465 ARG B 37 REMARK 465 GLU B 38 REMARK 465 ILE B 39 REMARK 465 MET B 40 REMARK 465 ARG B 41 REMARK 465 PHE B 42 REMARK 465 LYS B 43 REMARK 465 LYS B 44 REMARK 465 SER B 399 REMARK 465 VAL B 400 REMARK 465 ASP B 401 REMARK 465 LYS B 402 REMARK 465 LEU B 403 REMARK 465 ALA B 404 REMARK 465 ALA B 405 REMARK 465 ALA B 406 REMARK 465 LEU B 407 REMARK 465 GLU B 408 REMARK 465 HIS B 409 REMARK 465 HIS B 410 REMARK 465 HIS B 411 REMARK 465 HIS B 412 REMARK 465 HIS B 413 REMARK 465 HIS B 414 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 152 CG CD CE NZ REMARK 470 GLU A 178 CG CD OE1 OE2 REMARK 470 LYS B 152 CG CD CE NZ REMARK 470 GLU B 178 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 179 25.72 -152.19 REMARK 500 ASN A 266 29.04 -150.44 REMARK 500 ARG A 293 49.92 33.55 REMARK 500 CYS A 300 107.02 73.33 REMARK 500 SER B 179 25.99 -147.56 REMARK 500 ARG B 293 45.81 36.58 REMARK 500 CYS B 300 108.75 77.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SHF A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide SHF B 500 and CYS B REMARK 800 300 DBREF 6HJF A 2 393 UNP Q4DA80 PRCMA_TRYCC 32 423 DBREF 6HJF B 2 393 UNP Q4DA80 PRCMA_TRYCC 32 423 SEQADV 6HJF MET A 1 UNP Q4DA80 INITIATING METHIONINE SEQADV 6HJF ILE A 118 UNP Q4DA80 MET 148 CONFLICT SEQADV 6HJF TYR A 394 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF ILE A 395 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF TRP A 396 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF SER A 397 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF SER A 398 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF SER A 399 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF VAL A 400 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF ASP A 401 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF LYS A 402 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF LEU A 403 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF ALA A 404 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF ALA A 405 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF ALA A 406 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF LEU A 407 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF GLU A 408 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF HIS A 409 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF HIS A 410 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF HIS A 411 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF HIS A 412 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF HIS A 413 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF HIS A 414 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF MET B 1 UNP Q4DA80 INITIATING METHIONINE SEQADV 6HJF ILE B 118 UNP Q4DA80 MET 148 CONFLICT SEQADV 6HJF TYR B 394 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF ILE B 395 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF TRP B 396 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF SER B 397 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF SER B 398 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF SER B 399 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF VAL B 400 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF ASP B 401 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF LYS B 402 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF LEU B 403 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF ALA B 404 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF ALA B 405 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF ALA B 406 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF LEU B 407 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF GLU B 408 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF HIS B 409 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF HIS B 410 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF HIS B 411 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF HIS B 412 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF HIS B 413 UNP Q4DA80 EXPRESSION TAG SEQADV 6HJF HIS B 414 UNP Q4DA80 EXPRESSION TAG SEQRES 1 A 414 MET GLY GLN GLU LYS LEU LEU PHE ASP GLN LYS TYR LYS SEQRES 2 A 414 ILE ILE LYS GLY GLU LYS LYS GLU LYS LYS LYS ASN GLN SEQRES 3 A 414 ARG ALA ASN ARG ARG GLU HIS GLN GLN LYS ARG GLU ILE SEQRES 4 A 414 MET ARG PHE LYS LYS SER PHE THR CYS ILE ASP MET HIS SEQRES 5 A 414 THR GLU GLY GLU ALA ALA ARG ILE VAL THR SER GLY LEU SEQRES 6 A 414 PRO HIS ILE PRO GLY SER ASN MET ALA GLU LYS LYS ALA SEQRES 7 A 414 TYR LEU GLN GLU ASN MET ASP TYR LEU ARG ARG GLY ILE SEQRES 8 A 414 MET LEU GLU PRO ARG GLY HIS ASP ASP MET PHE GLY ALA SEQRES 9 A 414 PHE LEU PHE ASP PRO ILE GLU GLU GLY ALA ASP LEU GLY SEQRES 10 A 414 ILE VAL PHE MET ASP THR GLY GLY TYR LEU ASN MET CYS SEQRES 11 A 414 GLY HIS ASN SER ILE ALA ALA VAL THR ALA ALA VAL GLU SEQRES 12 A 414 THR GLY ILE VAL SER VAL PRO ALA LYS ALA THR ASN VAL SEQRES 13 A 414 PRO VAL VAL LEU ASP THR PRO ALA GLY LEU VAL ARG GLY SEQRES 14 A 414 THR ALA HIS LEU GLN SER GLY THR GLU SER GLU VAL SER SEQRES 15 A 414 ASN ALA SER ILE ILE ASN VAL PRO SER PHE LEU TYR GLN SEQRES 16 A 414 GLN ASP VAL VAL VAL VAL LEU PRO LYS PRO TYR GLY GLU SEQRES 17 A 414 VAL ARG VAL ASP ILE ALA PHE GLY GLY ASN PHE PHE ALA SEQRES 18 A 414 ILE VAL PRO ALA GLU GLN LEU GLY ILE ASP ILE SER VAL SEQRES 19 A 414 GLN ASN LEU SER ARG LEU GLN GLU ALA GLY GLU LEU LEU SEQRES 20 A 414 ARG THR GLU ILE ASN ARG SER VAL LYS VAL GLN HIS PRO SEQRES 21 A 414 GLN LEU PRO HIS ILE ASN THR VAL ASP CYS VAL GLU ILE SEQRES 22 A 414 TYR GLY PRO PRO THR ASN PRO GLU ALA ASN TYR LYS ASN SEQRES 23 A 414 VAL VAL ILE PHE GLY ASN ARG GLN ALA ASP ARG SER PRO SEQRES 24 A 414 CYS GLY THR GLY THR SER ALA LYS MET ALA THR LEU TYR SEQRES 25 A 414 ALA LYS GLY GLN LEU ARG ILE GLY GLU THR PHE VAL TYR SEQRES 26 A 414 GLU SER ILE LEU GLY SER LEU PHE GLN GLY ARG VAL LEU SEQRES 27 A 414 GLY GLU GLU ARG ILE PRO GLY VAL LYS VAL PRO VAL THR SEQRES 28 A 414 LYS ASP ALA GLU GLU GLY MET LEU VAL VAL THR ALA GLU SEQRES 29 A 414 ILE THR GLY LYS ALA PHE ILE MET GLY PHE ASN THR MET SEQRES 30 A 414 LEU PHE ASP PRO THR ASP PRO PHE LYS ASN GLY PHE THR SEQRES 31 A 414 LEU LYS GLN TYR ILE TRP SER SER SER VAL ASP LYS LEU SEQRES 32 A 414 ALA ALA ALA LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 414 MET GLY GLN GLU LYS LEU LEU PHE ASP GLN LYS TYR LYS SEQRES 2 B 414 ILE ILE LYS GLY GLU LYS LYS GLU LYS LYS LYS ASN GLN SEQRES 3 B 414 ARG ALA ASN ARG ARG GLU HIS GLN GLN LYS ARG GLU ILE SEQRES 4 B 414 MET ARG PHE LYS LYS SER PHE THR CYS ILE ASP MET HIS SEQRES 5 B 414 THR GLU GLY GLU ALA ALA ARG ILE VAL THR SER GLY LEU SEQRES 6 B 414 PRO HIS ILE PRO GLY SER ASN MET ALA GLU LYS LYS ALA SEQRES 7 B 414 TYR LEU GLN GLU ASN MET ASP TYR LEU ARG ARG GLY ILE SEQRES 8 B 414 MET LEU GLU PRO ARG GLY HIS ASP ASP MET PHE GLY ALA SEQRES 9 B 414 PHE LEU PHE ASP PRO ILE GLU GLU GLY ALA ASP LEU GLY SEQRES 10 B 414 ILE VAL PHE MET ASP THR GLY GLY TYR LEU ASN MET CYS SEQRES 11 B 414 GLY HIS ASN SER ILE ALA ALA VAL THR ALA ALA VAL GLU SEQRES 12 B 414 THR GLY ILE VAL SER VAL PRO ALA LYS ALA THR ASN VAL SEQRES 13 B 414 PRO VAL VAL LEU ASP THR PRO ALA GLY LEU VAL ARG GLY SEQRES 14 B 414 THR ALA HIS LEU GLN SER GLY THR GLU SER GLU VAL SER SEQRES 15 B 414 ASN ALA SER ILE ILE ASN VAL PRO SER PHE LEU TYR GLN SEQRES 16 B 414 GLN ASP VAL VAL VAL VAL LEU PRO LYS PRO TYR GLY GLU SEQRES 17 B 414 VAL ARG VAL ASP ILE ALA PHE GLY GLY ASN PHE PHE ALA SEQRES 18 B 414 ILE VAL PRO ALA GLU GLN LEU GLY ILE ASP ILE SER VAL SEQRES 19 B 414 GLN ASN LEU SER ARG LEU GLN GLU ALA GLY GLU LEU LEU SEQRES 20 B 414 ARG THR GLU ILE ASN ARG SER VAL LYS VAL GLN HIS PRO SEQRES 21 B 414 GLN LEU PRO HIS ILE ASN THR VAL ASP CYS VAL GLU ILE SEQRES 22 B 414 TYR GLY PRO PRO THR ASN PRO GLU ALA ASN TYR LYS ASN SEQRES 23 B 414 VAL VAL ILE PHE GLY ASN ARG GLN ALA ASP ARG SER PRO SEQRES 24 B 414 CYS GLY THR GLY THR SER ALA LYS MET ALA THR LEU TYR SEQRES 25 B 414 ALA LYS GLY GLN LEU ARG ILE GLY GLU THR PHE VAL TYR SEQRES 26 B 414 GLU SER ILE LEU GLY SER LEU PHE GLN GLY ARG VAL LEU SEQRES 27 B 414 GLY GLU GLU ARG ILE PRO GLY VAL LYS VAL PRO VAL THR SEQRES 28 B 414 LYS ASP ALA GLU GLU GLY MET LEU VAL VAL THR ALA GLU SEQRES 29 B 414 ILE THR GLY LYS ALA PHE ILE MET GLY PHE ASN THR MET SEQRES 30 B 414 LEU PHE ASP PRO THR ASP PRO PHE LYS ASN GLY PHE THR SEQRES 31 B 414 LEU LYS GLN TYR ILE TRP SER SER SER VAL ASP LYS LEU SEQRES 32 B 414 ALA ALA ALA LEU GLU HIS HIS HIS HIS HIS HIS HET SHF A 500 8 HET SHF B 500 8 HETNAM SHF LAEVULINIC ACID HETSYN SHF LEVULINIC ACID FORMUL 3 SHF 2(C5 H8 O3) FORMUL 5 HOH *528(H2 O) HELIX 1 AA1 ASN A 72 MET A 84 1 13 HELIX 2 AA2 MET A 84 LEU A 93 1 10 HELIX 3 AA3 CYS A 130 THR A 144 1 15 HELIX 4 AA4 GLU A 226 GLY A 229 5 4 HELIX 5 AA5 SER A 233 GLN A 235 5 3 HELIX 6 AA6 ASN A 236 VAL A 255 1 20 HELIX 7 AA7 CYS A 300 LYS A 314 1 15 HELIX 8 AA8 ASN B 72 MET B 84 1 13 HELIX 9 AA9 MET B 84 LEU B 93 1 10 HELIX 10 AB1 CYS B 130 THR B 144 1 15 HELIX 11 AB2 GLU B 226 GLY B 229 5 4 HELIX 12 AB3 SER B 233 GLN B 235 5 3 HELIX 13 AB4 ASN B 236 VAL B 255 1 20 HELIX 14 AB5 CYS B 300 LYS B 314 1 15 SHEET 1 AA132 PHE A 192 VAL A 201 0 SHEET 2 AA132 GLU A 208 PHE A 215 -1 O VAL A 211 N VAL A 198 SHEET 3 AA132 PHE A 219 PRO A 224 -1 O ILE A 222 N ASP A 212 SHEET 4 AA132 VAL A 268 GLY A 275 1 O GLU A 272 N VAL A 223 SHEET 5 AA132 TYR A 284 PHE A 290 -1 O VAL A 287 N ILE A 273 SHEET 6 AA132 THR A 322 SER A 327 1 O GLU A 326 N ASN A 286 SHEET 7 AA132 LEU A 332 ILE A 343 -1 O GLY A 335 N PHE A 323 SHEET 8 AA132 MET A 358 GLY A 367 -1 O GLU A 364 N ARG A 336 SHEET 9 AA132 VAL A 181 ILE A 187 -1 N ILE A 186 O ILE A 365 SHEET 10 AA132 GLY A 165 LEU A 173 -1 N HIS A 172 O SER A 182 SHEET 11 AA132 ASN A 155 THR A 162 -1 N LEU A 160 O VAL A 167 SHEET 12 AA132 LEU A 116 ASP A 122 1 N LEU A 116 O ASP A 161 SHEET 13 AA132 PHE A 102 PHE A 107 -1 N PHE A 107 O GLY A 117 SHEET 14 AA132 GLU A 56 SER A 63 1 N VAL A 61 O ALA A 104 SHEET 15 AA132 PHE A 46 THR A 53 -1 N MET A 51 O ALA A 58 SHEET 16 AA132 ALA A 369 MET A 377 -1 O MET A 372 N ASP A 50 SHEET 17 AA132 ALA B 369 MET B 377 -1 O PHE B 374 N THR A 376 SHEET 18 AA132 PHE B 46 THR B 53 -1 N ASP B 50 O MET B 372 SHEET 19 AA132 GLU B 56 SER B 63 -1 O GLU B 56 N THR B 53 SHEET 20 AA132 PHE B 102 PHE B 107 1 O ALA B 104 N VAL B 61 SHEET 21 AA132 LEU B 116 ASP B 122 -1 O GLY B 117 N PHE B 107 SHEET 22 AA132 ASN B 155 THR B 162 1 O ASP B 161 N LEU B 116 SHEET 23 AA132 GLY B 165 LEU B 173 -1 O VAL B 167 N LEU B 160 SHEET 24 AA132 VAL B 181 ILE B 187 -1 O SER B 182 N HIS B 172 SHEET 25 AA132 GLY B 357 GLY B 367 -1 O GLY B 367 N ALA B 184 SHEET 26 AA132 LEU B 332 PRO B 344 -1 N LEU B 338 O THR B 362 SHEET 27 AA132 PHE B 323 GLU B 326 -1 N PHE B 323 O GLY B 335 SHEET 28 AA132 TYR B 284 PHE B 290 1 N TYR B 284 O GLU B 326 SHEET 29 AA132 VAL B 268 GLY B 275 -1 N VAL B 271 O ILE B 289 SHEET 30 AA132 PHE B 219 PRO B 224 1 N VAL B 223 O GLU B 272 SHEET 31 AA132 GLU B 208 PHE B 215 -1 N ASP B 212 O ILE B 222 SHEET 32 AA132 PHE B 192 VAL B 201 -1 N GLN B 195 O ILE B 213 SHEET 1 AA226 GLN A 294 ALA A 295 0 SHEET 2 AA226 TYR A 284 PHE A 290 -1 N PHE A 290 O GLN A 294 SHEET 3 AA226 THR A 322 SER A 327 1 O GLU A 326 N ASN A 286 SHEET 4 AA226 LEU A 332 ILE A 343 -1 O GLY A 335 N PHE A 323 SHEET 5 AA226 MET A 358 GLY A 367 -1 O GLU A 364 N ARG A 336 SHEET 6 AA226 VAL A 181 ILE A 187 -1 N ILE A 186 O ILE A 365 SHEET 7 AA226 GLY A 165 LEU A 173 -1 N HIS A 172 O SER A 182 SHEET 8 AA226 ASN A 155 THR A 162 -1 N LEU A 160 O VAL A 167 SHEET 9 AA226 LEU A 116 ASP A 122 1 N LEU A 116 O ASP A 161 SHEET 10 AA226 PHE A 102 PHE A 107 -1 N PHE A 107 O GLY A 117 SHEET 11 AA226 GLU A 56 SER A 63 1 N VAL A 61 O ALA A 104 SHEET 12 AA226 PHE A 46 THR A 53 -1 N MET A 51 O ALA A 58 SHEET 13 AA226 ALA A 369 MET A 377 -1 O MET A 372 N ASP A 50 SHEET 14 AA226 ALA B 369 MET B 377 -1 O PHE B 374 N THR A 376 SHEET 15 AA226 PHE B 46 THR B 53 -1 N ASP B 50 O MET B 372 SHEET 16 AA226 GLU B 56 SER B 63 -1 O GLU B 56 N THR B 53 SHEET 17 AA226 PHE B 102 PHE B 107 1 O ALA B 104 N VAL B 61 SHEET 18 AA226 LEU B 116 ASP B 122 -1 O GLY B 117 N PHE B 107 SHEET 19 AA226 ASN B 155 THR B 162 1 O ASP B 161 N LEU B 116 SHEET 20 AA226 GLY B 165 LEU B 173 -1 O VAL B 167 N LEU B 160 SHEET 21 AA226 VAL B 181 ILE B 187 -1 O SER B 182 N HIS B 172 SHEET 22 AA226 GLY B 357 GLY B 367 -1 O GLY B 367 N ALA B 184 SHEET 23 AA226 LEU B 332 PRO B 344 -1 N LEU B 338 O THR B 362 SHEET 24 AA226 PHE B 323 GLU B 326 -1 N PHE B 323 O GLY B 335 SHEET 25 AA226 TYR B 284 PHE B 290 1 N TYR B 284 O GLU B 326 SHEET 26 AA226 GLN B 294 ALA B 295 -1 O GLN B 294 N PHE B 290 LINK SG CYS A 130 C5 SHF A 500 1555 1555 1.99 LINK SG CYS A 300 C2 SHF A 500 1555 1555 2.02 LINK SG CYS B 130 C5 SHF B 500 1555 1555 2.27 LINK SG CYS B 300 C2 SHF B 500 1555 1555 1.98 CISPEP 1 GLU A 94 PRO A 95 0 3.65 CISPEP 2 LYS A 204 PRO A 205 0 2.18 CISPEP 3 GLU B 94 PRO B 95 0 4.16 CISPEP 4 LYS B 204 PRO B 205 0 4.58 SITE 1 AC1 10 PHE A 102 LEU A 127 CYS A 130 GLY A 131 SITE 2 AC1 10 HIS A 132 PHE A 290 ASP A 296 CYS A 300 SITE 3 AC1 10 GLY A 301 THR A 302 SITE 1 AC2 15 PHE B 102 LEU B 127 CYS B 130 GLY B 131 SITE 2 AC2 15 HIS B 132 VAL B 288 PHE B 290 ASP B 296 SITE 3 AC2 15 SER B 298 PRO B 299 GLY B 301 THR B 302 SITE 4 AC2 15 GLY B 303 THR B 304 PHE B 333 CRYST1 129.666 90.841 85.919 90.00 126.29 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007712 0.000000 0.005662 0.00000 SCALE2 0.000000 0.011008 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014439 0.00000