HEADER NUCLEAR PROTEIN 10-SEP-18 6HL0 TITLE CRYSTAL STRUCTURE OF FARNESOID X RECEPTOR (FXR) WITH BOUND NCOA-2 TITLE 2 PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: BILE ACID RECEPTOR; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: FARNESOID X-ACTIVATED RECEPTOR,FARNESOL RECEPTOR HRR-1, COMPND 5 NUCLEAR RECEPTOR SUBFAMILY 1 GROUP H MEMBER 4,RETINOID X RECEPTOR- COMPND 6 INTERACTING PROTEIN 14,RXR-INTERACTING PROTEIN 14; COMPND 7 ENGINEERED: YES; COMPND 8 OTHER_DETAILS: PROTEIN DOMAIN; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: NCOA-2 PEPTIDE (NUCLEAR RECEPTOR COACTIVATOR 2), LYS-GLU- COMPND 11 ASN-ALA-LEU-LEU-ARG-TYR-LEU-LEU-ASP-LYS-ASP; COMPND 12 CHAIN: B; COMPND 13 ENGINEERED: YES; COMPND 14 OTHER_DETAILS: POLYPEPTIDE SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NR1H4, BAR, FXR, HRR1, RIP14; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606 KEYWDS ACTIVATOR, DNA-BINDING, RECEPTOR, REPRESSOR, COMPLEX, NUCLEAR PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR D.KUDLINZKI,D.MERK,V.L.LINHARD,K.SAXENA,M.SCHUBERT-ZSILAVECZ, AUTHOR 2 H.SCHWALBE REVDAT 3 24-JAN-24 6HL0 1 REMARK REVDAT 2 17-JUL-19 6HL0 1 JRNL REVDAT 1 29-MAY-19 6HL0 0 JRNL AUTH D.MERK,S.SREERAMULU,D.KUDLINZKI,K.SAXENA,V.LINHARD, JRNL AUTH 2 S.L.GANDE,F.HILLER,C.LAMERS,E.NILSSON,A.AAGAARD,L.WISSLER, JRNL AUTH 3 N.DEKKER,K.BAMBERG,M.SCHUBERT-ZSILAVECZ,H.SCHWALBE JRNL TITL MOLECULAR TUNING OF FARNESOID X RECEPTOR PARTIAL AGONISM. JRNL REF NAT COMMUN V. 10 2915 2019 JRNL REFN ESSN 2041-1723 JRNL PMID 31266946 JRNL DOI 10.1038/S41467-019-10853-2 REMARK 2 REMARK 2 RESOLUTION. 1.66 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.66 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.58 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.2 REMARK 3 NUMBER OF REFLECTIONS : 26860 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.216 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.830 REMARK 3 FREE R VALUE TEST SET COUNT : 760 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.5906 - 2.8384 1.00 5614 175 0.1752 0.2088 REMARK 3 2 2.8384 - 2.2530 1.00 5488 176 0.2128 0.2450 REMARK 3 3 2.2530 - 1.9682 1.00 5476 140 0.2380 0.2924 REMARK 3 4 1.9682 - 1.7882 0.99 5390 155 0.3126 0.3585 REMARK 3 5 1.7882 - 1.6601 0.76 4132 114 0.3527 0.3634 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.320 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2055 REMARK 3 ANGLE : 0.898 2774 REMARK 3 CHIRALITY : 0.054 311 REMARK 3 PLANARITY : 0.007 356 REMARK 3 DIHEDRAL : 19.207 1264 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 241 THROUGH 262 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.3820 -26.8942 113.5393 REMARK 3 T TENSOR REMARK 3 T11: 0.2645 T22: 0.1500 REMARK 3 T33: 0.1989 T12: -0.0085 REMARK 3 T13: 0.0285 T23: 0.0019 REMARK 3 L TENSOR REMARK 3 L11: 2.5128 L22: 3.6040 REMARK 3 L33: 6.7672 L12: 0.3439 REMARK 3 L13: -1.2579 L23: 0.2733 REMARK 3 S TENSOR REMARK 3 S11: 0.0131 S12: -0.0233 S13: -0.0343 REMARK 3 S21: 0.0860 S22: 0.0226 S23: -0.1146 REMARK 3 S31: 0.5748 S32: 0.4158 S33: -0.0109 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 263 THROUGH 279 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.0396 -23.9314 84.5477 REMARK 3 T TENSOR REMARK 3 T11: 0.3379 T22: 0.2893 REMARK 3 T33: 0.4767 T12: 0.0224 REMARK 3 T13: 0.0941 T23: 0.0179 REMARK 3 L TENSOR REMARK 3 L11: 8.1898 L22: 3.6738 REMARK 3 L33: 5.3273 L12: 2.1088 REMARK 3 L13: -4.7264 L23: -1.7603 REMARK 3 S TENSOR REMARK 3 S11: -0.1477 S12: 0.0106 S13: -1.1300 REMARK 3 S21: 0.3539 S22: -0.2890 S23: 0.2652 REMARK 3 S31: 0.0322 S32: -0.2077 S33: 0.3863 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 280 THROUGH 323 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.8146 -13.2243 95.6390 REMARK 3 T TENSOR REMARK 3 T11: 0.1868 T22: 0.1672 REMARK 3 T33: 0.1703 T12: 0.0072 REMARK 3 T13: -0.0399 T23: -0.0084 REMARK 3 L TENSOR REMARK 3 L11: 3.3222 L22: 1.5167 REMARK 3 L33: 4.4157 L12: -0.1304 REMARK 3 L13: -2.2036 L23: 0.2423 REMARK 3 S TENSOR REMARK 3 S11: -0.0711 S12: 0.1069 S13: -0.1017 REMARK 3 S21: -0.0679 S22: -0.1279 S23: 0.1378 REMARK 3 S31: -0.0428 S32: -0.3077 S33: 0.1621 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 324 THROUGH 338 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.4805 -16.8738 99.2411 REMARK 3 T TENSOR REMARK 3 T11: 0.2195 T22: 0.3091 REMARK 3 T33: 0.2453 T12: -0.0752 REMARK 3 T13: 0.0374 T23: 0.0139 REMARK 3 L TENSOR REMARK 3 L11: 4.2399 L22: 5.2765 REMARK 3 L33: 3.4809 L12: -1.8858 REMARK 3 L13: -0.7024 L23: 1.1163 REMARK 3 S TENSOR REMARK 3 S11: -0.0135 S12: 0.1358 S13: -0.3148 REMARK 3 S21: -0.4522 S22: -0.0419 S23: -0.3541 REMARK 3 S31: 0.0722 S32: 0.3200 S33: 0.0111 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 339 THROUGH 375 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.5935 -15.5942 94.7281 REMARK 3 T TENSOR REMARK 3 T11: 0.1649 T22: 0.3844 REMARK 3 T33: 0.3193 T12: 0.0177 REMARK 3 T13: -0.0027 T23: 0.0630 REMARK 3 L TENSOR REMARK 3 L11: 1.1136 L22: 1.2871 REMARK 3 L33: 3.4257 L12: 0.8692 REMARK 3 L13: -0.1504 L23: 0.3332 REMARK 3 S TENSOR REMARK 3 S11: -0.0948 S12: 0.1291 S13: -0.1664 REMARK 3 S21: 0.0915 S22: 0.0642 S23: -0.2510 REMARK 3 S31: -0.0411 S32: 0.1919 S33: 0.0509 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 376 THROUGH 400 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.6006 -13.2709 108.0456 REMARK 3 T TENSOR REMARK 3 T11: 0.2322 T22: 0.1507 REMARK 3 T33: 0.1278 T12: -0.0410 REMARK 3 T13: 0.0049 T23: -0.0242 REMARK 3 L TENSOR REMARK 3 L11: 4.8162 L22: 6.8332 REMARK 3 L33: 3.1335 L12: -3.3948 REMARK 3 L13: 1.4488 L23: -1.0767 REMARK 3 S TENSOR REMARK 3 S11: -0.2278 S12: 0.1627 S13: -0.0760 REMARK 3 S21: 0.3647 S22: 0.1596 S23: -0.1296 REMARK 3 S31: -0.1825 S32: -0.0082 S33: 0.0827 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 401 THROUGH 428 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.1687 -17.7450 117.6585 REMARK 3 T TENSOR REMARK 3 T11: 0.2235 T22: 0.1069 REMARK 3 T33: 0.1435 T12: -0.0018 REMARK 3 T13: -0.0090 T23: -0.0101 REMARK 3 L TENSOR REMARK 3 L11: 2.4124 L22: 2.0349 REMARK 3 L33: 2.9303 L12: -0.8556 REMARK 3 L13: 2.0717 L23: -1.4892 REMARK 3 S TENSOR REMARK 3 S11: -0.1814 S12: -0.1954 S13: 0.0025 REMARK 3 S21: 0.4349 S22: 0.1407 S23: -0.0847 REMARK 3 S31: -0.2174 S32: -0.1232 S33: -0.0084 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 429 THROUGH 452 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.5053 -7.4434 104.5181 REMARK 3 T TENSOR REMARK 3 T11: 0.2385 T22: 0.2496 REMARK 3 T33: 0.2704 T12: -0.0658 REMARK 3 T13: -0.0440 T23: 0.0065 REMARK 3 L TENSOR REMARK 3 L11: 0.1805 L22: 4.0062 REMARK 3 L33: 8.7675 L12: -0.7388 REMARK 3 L13: 0.8705 L23: -5.8579 REMARK 3 S TENSOR REMARK 3 S11: -0.1106 S12: 0.1846 S13: 0.1706 REMARK 3 S21: 0.2906 S22: -0.1141 S23: -0.2915 REMARK 3 S31: -0.6045 S32: 0.4759 S33: 0.2971 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 453 THROUGH 471 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.4820 -4.3605 85.2451 REMARK 3 T TENSOR REMARK 3 T11: 0.3250 T22: 0.3594 REMARK 3 T33: 0.2826 T12: 0.0450 REMARK 3 T13: 0.0300 T23: 0.0460 REMARK 3 L TENSOR REMARK 3 L11: 2.7186 L22: 3.6187 REMARK 3 L33: 2.7408 L12: 0.6125 REMARK 3 L13: 0.6728 L23: -0.1474 REMARK 3 S TENSOR REMARK 3 S11: 0.0949 S12: 0.7116 S13: 0.4577 REMARK 3 S21: -0.7141 S22: -0.0500 S23: -0.2739 REMARK 3 S31: 0.2769 S32: -0.0554 S33: -0.0152 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 740 THROUGH 752 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.6133 -10.1765 91.9101 REMARK 3 T TENSOR REMARK 3 T11: 0.2468 T22: 0.2685 REMARK 3 T33: 0.2303 T12: 0.0032 REMARK 3 T13: -0.0430 T23: -0.0039 REMARK 3 L TENSOR REMARK 3 L11: 7.4970 L22: 2.5570 REMARK 3 L33: 8.8616 L12: -0.0888 REMARK 3 L13: 0.3553 L23: -0.1330 REMARK 3 S TENSOR REMARK 3 S11: -0.0002 S12: -0.4622 S13: 0.0958 REMARK 3 S21: 0.9654 S22: 0.1130 S23: -0.0023 REMARK 3 S31: -0.1234 S32: -0.0432 S33: -0.0496 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6HL0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-SEP-18. REMARK 100 THE DEPOSITION ID IS D_1200011751. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-NOV-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91841 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26862 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.660 REMARK 200 RESOLUTION RANGE LOW (A) : 41.580 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.11900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.66 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.75 REMARK 200 COMPLETENESS FOR SHELL (%) : 74.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4QE6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM CA(CH3COO)2, 10 MM DTT, 25-30% REMARK 280 PEG 3350, 100 MM TRIS, PH 7.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 42.67950 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 17.27900 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 42.67950 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 17.27900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1080 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 472 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 264 -152.04 -134.73 REMARK 500 VAL A 456 124.69 -37.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 455 0.16 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 6HL0 A 244 472 UNP Q96RI1 NR1H4_HUMAN 248 476 DBREF 6HL0 B 740 752 PDB 6HL0 6HL0 740 752 SEQADV 6HL0 SER A 241 UNP Q96RI1 EXPRESSION TAG SEQADV 6HL0 HIS A 242 UNP Q96RI1 EXPRESSION TAG SEQADV 6HL0 MET A 243 UNP Q96RI1 EXPRESSION TAG SEQRES 1 A 232 SER HIS MET GLU LEU THR PRO ASP GLN GLN THR LEU LEU SEQRES 2 A 232 HIS PHE ILE MET ASP SER TYR ASN LYS GLN ARG MET PRO SEQRES 3 A 232 GLN GLU ILE THR ASN LYS ILE LEU LYS GLU GLU PHE SER SEQRES 4 A 232 ALA GLU GLU ASN PHE LEU ILE LEU THR GLU MET ALA THR SEQRES 5 A 232 ASN HIS VAL GLN VAL LEU VAL GLU PHE THR LYS LYS LEU SEQRES 6 A 232 PRO GLY PHE GLN THR LEU ASP HIS GLU ASP GLN ILE ALA SEQRES 7 A 232 LEU LEU LYS GLY SER ALA VAL GLU ALA MET PHE LEU ARG SEQRES 8 A 232 SER ALA GLU ILE PHE ASN LYS LYS LEU PRO SER GLY HIS SEQRES 9 A 232 SER ASP LEU LEU GLU GLU ARG ILE ARG ASN SER GLY ILE SEQRES 10 A 232 SER ASP GLU TYR ILE THR PRO MET PHE SER PHE TYR LYS SEQRES 11 A 232 SER ILE GLY GLU LEU LYS MET THR GLN GLU GLU TYR ALA SEQRES 12 A 232 LEU LEU THR ALA ILE VAL ILE LEU SER PRO ASP ARG GLN SEQRES 13 A 232 TYR ILE LYS ASP ARG GLU ALA VAL GLU LYS LEU GLN GLU SEQRES 14 A 232 PRO LEU LEU ASP VAL LEU GLN LYS LEU CYS LYS ILE HIS SEQRES 15 A 232 GLN PRO GLU ASN PRO GLN HIS PHE ALA CYS LEU LEU GLY SEQRES 16 A 232 ARG LEU THR GLU LEU ARG THR PHE ASN HIS HIS HIS ALA SEQRES 17 A 232 GLU MET LEU MET SER TRP ARG VAL ASN ASP HIS LYS PHE SEQRES 18 A 232 THR PRO LEU LEU CYS GLU ILE TRP ASP VAL GLN SEQRES 1 B 13 LYS GLU ASN ALA LEU LEU ARG TYR LEU LEU ASP LYS ASP FORMUL 3 HOH *140(H2 O) HELIX 1 AA1 THR A 246 GLN A 263 1 18 HELIX 2 AA2 PRO A 266 GLU A 276 1 11 HELIX 3 AA3 SER A 279 LYS A 304 1 26 HELIX 4 AA4 GLY A 307 LEU A 311 5 5 HELIX 5 AA5 ASP A 312 LYS A 339 1 28 HELIX 6 AA6 GLY A 343 ARG A 353 1 11 HELIX 7 AA7 SER A 358 LEU A 375 1 18 HELIX 8 AA8 THR A 378 LEU A 391 1 14 HELIX 9 AA9 ASP A 400 GLN A 423 1 24 HELIX 10 AB1 GLN A 428 THR A 442 1 15 HELIX 11 AB2 THR A 442 SER A 453 1 12 HELIX 12 AB3 ARG A 455 HIS A 459 5 5 HELIX 13 AB4 THR A 462 TRP A 469 1 8 HELIX 14 AB5 ASN B 742 ASP B 750 1 9 CRYST1 85.359 34.558 82.880 90.00 103.05 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011715 0.000000 0.002715 0.00000 SCALE2 0.000000 0.028937 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012386 0.00000