HEADER GENE REGULATION 10-SEP-18 6HL6 TITLE FACTOR INHIBITING HIF (FIH) IN COMPLEX WITH ZINC, NOG AND IASPP(670- TITLE 2 693) COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOXIA-INDUCIBLE FACTOR 1-ALPHA INHIBITOR; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: FACTOR INHIBITING HIF-1,FIH-1,HYPOXIA-INDUCIBLE FACTOR COMPND 5 ASPARAGINE HYDROXYLASE; COMPND 6 EC: 1.14.11.30,1.14.11.-; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: RELA-ASSOCIATED INHIBITOR; COMPND 10 CHAIN: S; COMPND 11 SYNONYM: INHIBITOR OF ASPP PROTEIN,PROTEIN IASPP,NFKB-INTERACTING COMPND 12 PROTEIN 1,PPP1R13B-LIKE PROTEIN; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HIF1AN, FIH1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28A; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606 KEYWDS NON-HEME, DIOXYGENASE, OXYGENASE, METAL-BINDING, TRANSCRIPTION, KEYWDS 2 DOUBLE STRANDED BETA-HELIX, DSBH, FACIAL TRIAD, ASPARAGINYL/ASPARTYL KEYWDS 3 HYDROXYLASE, EPIGENETIC REGULATION, SIGNALING, ARD, BETA- KEYWDS 4 HYDROXYLATION, ACTIVATOR-INHIBITOR, OXIDOREDUCTASE-PEPTIDE COMPLEX, KEYWDS 5 OXIDOREDUCTASE, ANKYRIN REPEAT DOMAIN, APOPTOSIS, P53 BINDING KEYWDS 6 PROTEIN, ANK REPEAT, SH3 DOMAIN, ANKYRIN REPEATS, GENE REGULATION EXPDTA X-RAY DIFFRACTION AUTHOR T.M.LEISSING,R.CHOWDHURY,I.J.CLIFTON,X.LU,C.J.SCHOFIELD REVDAT 2 24-JAN-24 6HL6 1 REMARK REVDAT 1 09-OCT-19 6HL6 0 JRNL AUTH T.M.LEISSING,R.CHOWDHURY,I.J.CLIFTON,X.LU,C.J.SCHOFIELD JRNL TITL FACTOR INHIBITING HIF (FIH) IN COMPLEX WITH ZINC, NOG AND JRNL TITL 2 IASPP(670-693) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.97 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.97 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 74.51 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 40055 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.206 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.960 REMARK 3 FREE R VALUE TEST SET COUNT : 1986 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 74.5603 - 4.7471 1.00 2957 164 0.1883 0.2307 REMARK 3 2 4.7471 - 3.7680 1.00 2797 158 0.1254 0.1471 REMARK 3 3 3.7680 - 3.2917 1.00 2755 158 0.1470 0.1859 REMARK 3 4 3.2917 - 2.9907 1.00 2756 133 0.1636 0.2006 REMARK 3 5 2.9907 - 2.7763 1.00 2701 143 0.1624 0.1881 REMARK 3 6 2.7763 - 2.6126 1.00 2734 132 0.1635 0.1958 REMARK 3 7 2.6126 - 2.4818 1.00 2713 131 0.1639 0.1892 REMARK 3 8 2.4818 - 2.3738 1.00 2691 146 0.1622 0.2205 REMARK 3 9 2.3738 - 2.2824 0.99 2687 150 0.1824 0.2070 REMARK 3 10 2.2824 - 2.2036 0.99 2683 118 0.1984 0.2447 REMARK 3 11 2.2036 - 2.1347 0.99 2679 120 0.2249 0.3303 REMARK 3 12 2.1347 - 2.0737 0.99 2672 138 0.2537 0.3154 REMARK 3 13 2.0737 - 2.0191 0.99 2657 130 0.2889 0.3381 REMARK 3 14 2.0191 - 1.9698 0.97 2587 165 0.3116 0.3084 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.320 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 2958 REMARK 3 ANGLE : 0.956 4026 REMARK 3 CHIRALITY : 0.060 412 REMARK 3 PLANARITY : 0.008 531 REMARK 3 DIHEDRAL : 12.885 1729 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 15 THROUGH 49 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.1427 31.9862 -22.9711 REMARK 3 T TENSOR REMARK 3 T11: 0.3818 T22: 0.6705 REMARK 3 T33: 0.6386 T12: 0.0118 REMARK 3 T13: -0.0213 T23: 0.2882 REMARK 3 L TENSOR REMARK 3 L11: 1.2646 L22: 1.4998 REMARK 3 L33: 3.2090 L12: 0.3096 REMARK 3 L13: 1.4450 L23: 1.0264 REMARK 3 S TENSOR REMARK 3 S11: -0.3014 S12: 0.7637 S13: 0.9958 REMARK 3 S21: -0.4148 S22: -0.1621 S23: 0.0979 REMARK 3 S31: -0.6104 S32: 0.0647 S33: 0.4306 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 50 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.5503 24.5129 -12.4534 REMARK 3 T TENSOR REMARK 3 T11: 0.2049 T22: 0.4686 REMARK 3 T33: 0.3542 T12: 0.0786 REMARK 3 T13: 0.0533 T23: 0.0955 REMARK 3 L TENSOR REMARK 3 L11: 3.2433 L22: 1.6173 REMARK 3 L33: 2.4681 L12: -0.2165 REMARK 3 L13: 1.8407 L23: -0.9955 REMARK 3 S TENSOR REMARK 3 S11: -0.1401 S12: -0.2702 S13: 0.3373 REMARK 3 S21: 0.1707 S22: 0.0636 S23: 0.2238 REMARK 3 S31: -0.2349 S32: -0.4045 S33: 0.1199 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 105 THROUGH 124 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.8833 22.9487 8.7136 REMARK 3 T TENSOR REMARK 3 T11: 0.7220 T22: 0.8829 REMARK 3 T33: 0.3948 T12: 0.1690 REMARK 3 T13: -0.0026 T23: 0.0259 REMARK 3 L TENSOR REMARK 3 L11: 6.6736 L22: 6.4428 REMARK 3 L33: 0.0424 L12: -4.4047 REMARK 3 L13: -0.5088 L23: 0.3042 REMARK 3 S TENSOR REMARK 3 S11: -0.9081 S12: -1.3757 S13: 0.0413 REMARK 3 S21: 1.5983 S22: 0.5483 S23: -0.2656 REMARK 3 S31: -0.4040 S32: -0.6167 S33: 0.2645 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 125 THROUGH 149 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.7946 36.4118 0.8886 REMARK 3 T TENSOR REMARK 3 T11: 0.5375 T22: 0.6785 REMARK 3 T33: 0.4910 T12: 0.2507 REMARK 3 T13: 0.0279 T23: -0.0543 REMARK 3 L TENSOR REMARK 3 L11: 7.6917 L22: 3.4801 REMARK 3 L33: 3.0135 L12: 2.5675 REMARK 3 L13: -0.5275 L23: -0.4356 REMARK 3 S TENSOR REMARK 3 S11: 0.0003 S12: -0.8552 S13: 0.9793 REMARK 3 S21: 0.5670 S22: -0.0348 S23: 0.0938 REMARK 3 S31: -0.7898 S32: -0.5583 S33: 0.0758 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 150 THROUGH 190 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.4094 16.5721 -13.6395 REMARK 3 T TENSOR REMARK 3 T11: 0.2172 T22: 0.5797 REMARK 3 T33: 0.3467 T12: 0.0041 REMARK 3 T13: 0.0452 T23: 0.1553 REMARK 3 L TENSOR REMARK 3 L11: 3.7128 L22: 1.7044 REMARK 3 L33: 1.2307 L12: -0.6490 REMARK 3 L13: 1.4553 L23: 0.2118 REMARK 3 S TENSOR REMARK 3 S11: 0.1263 S12: -0.4741 S13: -0.1455 REMARK 3 S21: 0.2149 S22: 0.0613 S23: 0.2701 REMARK 3 S31: 0.1084 S32: -0.7114 S33: -0.0670 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 191 THROUGH 247 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.6025 22.1895 -7.9935 REMARK 3 T TENSOR REMARK 3 T11: 0.2016 T22: 0.3696 REMARK 3 T33: 0.3009 T12: 0.0220 REMARK 3 T13: 0.0219 T23: 0.0982 REMARK 3 L TENSOR REMARK 3 L11: 2.9835 L22: 1.1715 REMARK 3 L33: 2.8303 L12: -0.5710 REMARK 3 L13: 1.5276 L23: -0.6122 REMARK 3 S TENSOR REMARK 3 S11: -0.0835 S12: 0.0159 S13: 0.2906 REMARK 3 S21: 0.1405 S22: 0.0417 S23: -0.0357 REMARK 3 S31: -0.1316 S32: -0.0220 S33: 0.0428 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 248 THROUGH 297 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.9061 24.1620 -12.8527 REMARK 3 T TENSOR REMARK 3 T11: 0.2004 T22: 0.3979 REMARK 3 T33: 0.3325 T12: 0.0159 REMARK 3 T13: 0.0179 T23: 0.1230 REMARK 3 L TENSOR REMARK 3 L11: 4.4036 L22: 0.4875 REMARK 3 L33: 1.9327 L12: -0.6329 REMARK 3 L13: 1.4225 L23: -0.1165 REMARK 3 S TENSOR REMARK 3 S11: -0.0010 S12: 0.1505 S13: 0.3416 REMARK 3 S21: 0.0789 S22: -0.0193 S23: -0.0067 REMARK 3 S31: -0.1315 S32: 0.0217 S33: 0.0237 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 298 THROUGH 329 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.6002 2.5111 -7.9868 REMARK 3 T TENSOR REMARK 3 T11: 0.3177 T22: 0.3172 REMARK 3 T33: 0.3358 T12: 0.0389 REMARK 3 T13: -0.0774 T23: 0.0674 REMARK 3 L TENSOR REMARK 3 L11: 5.3035 L22: 3.4782 REMARK 3 L33: 4.8670 L12: -0.2091 REMARK 3 L13: 2.5545 L23: -0.1411 REMARK 3 S TENSOR REMARK 3 S11: 0.2453 S12: 0.1176 S13: -0.5999 REMARK 3 S21: -0.2848 S22: 0.0281 S23: 0.2008 REMARK 3 S31: 0.5093 S32: -0.0117 S33: -0.2892 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 330 THROUGH 349 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.9608 5.1389 5.0613 REMARK 3 T TENSOR REMARK 3 T11: 0.4802 T22: 0.3404 REMARK 3 T33: 0.3026 T12: 0.0764 REMARK 3 T13: -0.0941 T23: 0.0211 REMARK 3 L TENSOR REMARK 3 L11: 4.5309 L22: 2.7685 REMARK 3 L33: 4.3446 L12: -1.5327 REMARK 3 L13: -3.4062 L23: 1.7211 REMARK 3 S TENSOR REMARK 3 S11: -0.0415 S12: 0.0940 S13: 0.0944 REMARK 3 S21: 0.3078 S22: 0.0112 S23: -0.1315 REMARK 3 S31: -0.2598 S32: -0.4739 S33: -0.0525 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'S' AND (RESID 674 THROUGH 679 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.9668 -4.9090 -6.3822 REMARK 3 T TENSOR REMARK 3 T11: 0.9685 T22: 0.8630 REMARK 3 T33: 1.0256 T12: -0.1171 REMARK 3 T13: -0.0594 T23: -0.1294 REMARK 3 L TENSOR REMARK 3 L11: 4.1748 L22: 3.0644 REMARK 3 L33: 3.0418 L12: -3.5200 REMARK 3 L13: -3.5011 L23: 2.8759 REMARK 3 S TENSOR REMARK 3 S11: 0.3004 S12: 0.7990 S13: -2.8140 REMARK 3 S21: -0.0628 S22: -0.4336 S23: 0.2837 REMARK 3 S31: 2.0819 S32: -0.8704 S33: 0.0846 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'S' AND (RESID 680 THROUGH 690 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.4519 11.2148 -3.7562 REMARK 3 T TENSOR REMARK 3 T11: 0.4169 T22: 0.8156 REMARK 3 T33: 0.6563 T12: 0.0132 REMARK 3 T13: 0.0708 T23: 0.2190 REMARK 3 L TENSOR REMARK 3 L11: 4.5261 L22: 2.0129 REMARK 3 L33: 5.0063 L12: -1.7140 REMARK 3 L13: 4.5221 L23: -1.0723 REMARK 3 S TENSOR REMARK 3 S11: -0.4966 S12: -0.8722 S13: -0.4835 REMARK 3 S21: 0.5165 S22: 0.7477 S23: 0.2103 REMARK 3 S31: 0.4514 S32: -0.2077 S33: -0.2624 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6HL6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-SEP-18. REMARK 100 THE DEPOSITION ID IS D_1200011875. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-SEP-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9159 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40372 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.970 REMARK 200 RESOLUTION RANGE LOW (A) : 74.510 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 8.480 REMARK 200 R MERGE (I) : 0.07430 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14081.00 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.97 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 8.70 REMARK 200 R MERGE FOR SHELL (I) : 1.97990 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1H2K REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.76 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES PH = 7.5, 1.6 M AMMONIUM REMARK 280 SULFATE, 3.5% PEG400, PH 7.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 273K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 74.37600 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 43.04200 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 43.04200 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 37.18800 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 43.04200 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 43.04200 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 111.56400 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 43.04200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.04200 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 37.18800 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 43.04200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.04200 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 111.56400 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 74.37600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11410 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29560 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -206.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, S REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ALA A 3 REMARK 465 THR A 4 REMARK 465 ALA A 5 REMARK 465 ALA A 6 REMARK 465 GLU A 7 REMARK 465 ALA A 8 REMARK 465 VAL A 9 REMARK 465 ALA A 10 REMARK 465 SER A 11 REMARK 465 GLY A 12 REMARK 465 SER A 13 REMARK 465 GLY A 14 REMARK 465 GLY S 670 REMARK 465 ALA S 671 REMARK 465 ASN S 672 REMARK 465 TYR S 673 REMARK 465 SER S 691 REMARK 465 HIS S 692 REMARK 465 GLY S 693 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 15 CG CD OE1 OE2 REMARK 470 ARG A 17 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 18 CG CD OE1 OE2 REMARK 470 GLU A 19 CG CD OE1 OE2 REMARK 470 GLU A 29 CD OE1 OE2 REMARK 470 LYS A 106 CE NZ REMARK 470 GLN A 112 CG CD OE1 NE2 REMARK 470 ASN A 113 CG OD1 ND2 REMARK 470 LYS A 115 CG CD CE NZ REMARK 470 ARG A 117 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 133 CG CD OE1 NE2 REMARK 470 GLN A 136 CG CD OE1 NE2 REMARK 470 GLN A 137 CG CD OE1 NE2 REMARK 470 ARG A 156 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 157 CE NZ REMARK 470 LYS A 172 CE NZ REMARK 470 GLU A 250 CD OE1 OE2 REMARK 470 LYS A 304 CG CD CE NZ REMARK 470 ARG A 305 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 307 CG CD OE1 OE2 REMARK 470 LYS A 311 CE NZ REMARK 470 GLN A 334 CD OE1 NE2 REMARK 470 ILE A 344 CD1 REMARK 470 LYS A 345 CE NZ REMARK 470 ILE S 675 CG1 CG2 CD1 REMARK 470 ASP S 677 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 100 74.22 -102.68 REMARK 500 GLU A 202 30.69 -88.14 REMARK 500 ARG A 238 -6.87 82.42 REMARK 500 ASN A 246 75.21 -151.47 REMARK 500 TYR A 276 -9.10 77.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 409 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 199 NE2 REMARK 620 2 ASP A 201 OD2 104.3 REMARK 620 3 HIS A 279 NE2 92.7 86.3 REMARK 620 4 OGA A 410 O2 159.2 88.1 104.9 REMARK 620 5 OGA A 410 O2' 86.3 165.1 104.0 78.9 REMARK 620 6 HOH A 524 O 83.7 90.2 174.2 79.6 80.3 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OGA A 410 DBREF 6HL6 A 1 349 UNP Q9NWT6 HIF1N_HUMAN 1 349 DBREF 6HL6 S 670 693 UNP Q8WUF5 IASPP_HUMAN 670 693 SEQADV 6HL6 SER A 0 UNP Q9NWT6 EXPRESSION TAG SEQRES 1 A 350 SER MET ALA ALA THR ALA ALA GLU ALA VAL ALA SER GLY SEQRES 2 A 350 SER GLY GLU PRO ARG GLU GLU ALA GLY ALA LEU GLY PRO SEQRES 3 A 350 ALA TRP ASP GLU SER GLN LEU ARG SER TYR SER PHE PRO SEQRES 4 A 350 THR ARG PRO ILE PRO ARG LEU SER GLN SER ASP PRO ARG SEQRES 5 A 350 ALA GLU GLU LEU ILE GLU ASN GLU GLU PRO VAL VAL LEU SEQRES 6 A 350 THR ASP THR ASN LEU VAL TYR PRO ALA LEU LYS TRP ASP SEQRES 7 A 350 LEU GLU TYR LEU GLN GLU ASN ILE GLY ASN GLY ASP PHE SEQRES 8 A 350 SER VAL TYR SER ALA SER THR HIS LYS PHE LEU TYR TYR SEQRES 9 A 350 ASP GLU LYS LYS MET ALA ASN PHE GLN ASN PHE LYS PRO SEQRES 10 A 350 ARG SER ASN ARG GLU GLU MET LYS PHE HIS GLU PHE VAL SEQRES 11 A 350 GLU LYS LEU GLN ASP ILE GLN GLN ARG GLY GLY GLU GLU SEQRES 12 A 350 ARG LEU TYR LEU GLN GLN THR LEU ASN ASP THR VAL GLY SEQRES 13 A 350 ARG LYS ILE VAL MET ASP PHE LEU GLY PHE ASN TRP ASN SEQRES 14 A 350 TRP ILE ASN LYS GLN GLN GLY LYS ARG GLY TRP GLY GLN SEQRES 15 A 350 LEU THR SER ASN LEU LEU LEU ILE GLY MET GLU GLY ASN SEQRES 16 A 350 VAL THR PRO ALA HIS TYR ASP GLU GLN GLN ASN PHE PHE SEQRES 17 A 350 ALA GLN ILE LYS GLY TYR LYS ARG CYS ILE LEU PHE PRO SEQRES 18 A 350 PRO ASP GLN PHE GLU CYS LEU TYR PRO TYR PRO VAL HIS SEQRES 19 A 350 HIS PRO CYS ASP ARG GLN SER GLN VAL ASP PHE ASP ASN SEQRES 20 A 350 PRO ASP TYR GLU ARG PHE PRO ASN PHE GLN ASN VAL VAL SEQRES 21 A 350 GLY TYR GLU THR VAL VAL GLY PRO GLY ASP VAL LEU TYR SEQRES 22 A 350 ILE PRO MET TYR TRP TRP HIS HIS ILE GLU SER LEU LEU SEQRES 23 A 350 ASN GLY GLY ILE THR ILE THR VAL ASN PHE TRP TYR LYS SEQRES 24 A 350 GLY ALA PRO THR PRO LYS ARG ILE GLU TYR PRO LEU LYS SEQRES 25 A 350 ALA HIS GLN LYS VAL ALA ILE MET ARG ASN ILE GLU LYS SEQRES 26 A 350 MET LEU GLY GLU ALA LEU GLY ASN PRO GLN GLU VAL GLY SEQRES 27 A 350 PRO LEU LEU ASN THR MET ILE LYS GLY ARG TYR ASN SEQRES 1 S 24 GLY ALA ASN TYR SER ILE VAL ASP PHE LEU ILE THR ALA SEQRES 2 S 24 GLY ALA ASN VAL ASN SER PRO ASP SER HIS GLY HET GOL A 401 6 HET GOL A 402 6 HET GOL A 403 6 HET GOL A 404 6 HET GOL A 405 6 HET SO4 A 406 5 HET SO4 A 407 5 HET SO4 A 408 5 HET ZN A 409 1 HET OGA A 410 10 HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETNAM ZN ZINC ION HETNAM OGA N-OXALYLGLYCINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL 5(C3 H8 O3) FORMUL 8 SO4 3(O4 S 2-) FORMUL 11 ZN ZN 2+ FORMUL 12 OGA C4 H5 N O5 FORMUL 13 HOH *234(H2 O) HELIX 1 AA1 ASP A 28 LEU A 32 5 5 HELIX 2 AA2 ASP A 49 ASN A 58 1 10 HELIX 3 AA3 VAL A 70 TRP A 76 5 7 HELIX 4 AA4 ASP A 77 ILE A 85 1 9 HELIX 5 AA5 ASP A 104 PHE A 111 5 8 HELIX 6 AA6 PHE A 125 GLY A 139 1 15 HELIX 7 AA7 GLY A 155 GLY A 164 1 10 HELIX 8 AA8 ASN A 166 GLY A 178 1 13 HELIX 9 AA9 PRO A 220 ASP A 222 5 3 HELIX 10 AB1 GLN A 223 TYR A 228 1 6 HELIX 11 AB2 PHE A 252 VAL A 258 5 7 HELIX 12 AB3 LYS A 311 LEU A 330 1 20 HELIX 13 AB4 ASN A 332 GLN A 334 5 3 HELIX 14 AB5 GLU A 335 LYS A 345 1 11 HELIX 15 AB6 ILE S 675 ILE S 680 1 6 SHEET 1 AA1 2 GLU A 18 GLU A 19 0 SHEET 2 AA1 2 GLY A 24 PRO A 25 -1 O GLY A 24 N GLU A 19 SHEET 1 AA2 5 THR A 39 PRO A 41 0 SHEET 2 AA2 5 GLY A 260 VAL A 265 1 O GLU A 262 N ARG A 40 SHEET 3 AA2 5 LYS A 214 PHE A 219 -1 N LEU A 218 O TYR A 261 SHEET 4 AA2 5 TRP A 278 SER A 283 -1 O HIS A 280 N ILE A 217 SHEET 5 AA2 5 VAL A 195 HIS A 199 -1 N THR A 196 O ILE A 281 SHEET 1 AA3 9 ARG A 44 LEU A 45 0 SHEET 2 AA3 9 VAL A 62 LEU A 64 1 O VAL A 63 N LEU A 45 SHEET 3 AA3 9 VAL A 270 ILE A 273 -1 O VAL A 270 N LEU A 64 SHEET 4 AA3 9 GLN A 204 LYS A 211 -1 N ASN A 205 O ILE A 273 SHEET 5 AA3 9 THR A 290 TYR A 297 -1 O TYR A 297 N GLN A 204 SHEET 6 AA3 9 LEU A 186 GLY A 190 -1 N LEU A 188 O THR A 292 SHEET 7 AA3 9 ARG A 143 THR A 149 -1 N GLN A 148 O LEU A 187 SHEET 8 AA3 9 ASP A 89 ALA A 95 -1 N ALA A 95 O ARG A 143 SHEET 9 AA3 9 SER A 118 LYS A 124 -1 O MET A 123 N PHE A 90 SHEET 1 AA4 6 ARG A 44 LEU A 45 0 SHEET 2 AA4 6 VAL A 62 LEU A 64 1 O VAL A 63 N LEU A 45 SHEET 3 AA4 6 VAL A 270 ILE A 273 -1 O VAL A 270 N LEU A 64 SHEET 4 AA4 6 GLN A 204 LYS A 211 -1 N ASN A 205 O ILE A 273 SHEET 5 AA4 6 THR A 290 TYR A 297 -1 O TYR A 297 N GLN A 204 SHEET 6 AA4 6 LEU A 182 SER A 184 -1 N THR A 183 O TRP A 296 LINK NE2 HIS A 199 ZN ZN A 409 1555 1555 2.11 LINK OD2 ASP A 201 ZN ZN A 409 1555 1555 1.90 LINK NE2 HIS A 279 ZN ZN A 409 1555 1555 2.08 LINK ZN ZN A 409 O2 OGA A 410 1555 1555 2.15 LINK ZN ZN A 409 O2' OGA A 410 1555 1555 2.07 LINK ZN ZN A 409 O HOH A 524 1555 1555 1.95 CISPEP 1 TYR A 308 PRO A 309 0 -2.57 SITE 1 AC1 3 LEU A 150 ASN A 151 PHE A 162 SITE 1 AC2 1 ARG A 120 SITE 1 AC3 4 ARG A 33 HIS A 98 ARG A 143 HOH A 513 SITE 1 AC4 4 TYR A 230 SER A 240 GLN A 241 HOH A 512 SITE 1 AC5 2 ARG A 156 HOH A 595 SITE 1 AC6 4 ARG A 138 GLY A 140 GLU A 141 GLU A 142 SITE 1 AC7 5 ARG A 143 GLU A 192 GLY A 193 LEU A 285 SITE 2 AC7 5 ASN A 286 SITE 1 AC8 3 LYS A 311 ALA A 312 HOH A 506 SITE 1 AC9 5 HIS A 199 ASP A 201 HIS A 279 OGA A 410 SITE 2 AC9 5 HOH A 524 SITE 1 AD1 13 TYR A 145 THR A 196 HIS A 199 ASP A 201 SITE 2 AD1 13 ASN A 205 PHE A 207 LYS A 214 HIS A 279 SITE 3 AD1 13 ILE A 281 ASN A 294 TRP A 296 ZN A 409 SITE 4 AD1 13 HOH A 524 CRYST1 86.084 86.084 148.752 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011617 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011617 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006723 0.00000