data_6HO5 # _entry.id 6HO5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.303 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6HO5 WWPDB D_1200011927 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6HO5 _pdbx_database_status.recvd_initial_deposition_date 2018-09-17 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Wintjens, R.' 1 0000-0002-0234-7847 'Wohlkonig, A.' 2 0000-0003-3103-5022 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Biochim Biophys Acta Proteins Proteom' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1878-1454 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 1867 _citation.language ? _citation.page_first 248 _citation.page_last 258 _citation.title 'A comprehensive analysis of the protein-ligand interactions in crystal structures of Mycobacterium tuberculosis EthR.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.bbapap.2018.12.003 _citation.pdbx_database_id_PubMed 30553830 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tanina, A.' 1 ? primary 'Wohlkonig, A.' 2 ? primary 'Soror, S.H.' 3 ? primary 'Flipo, M.' 4 ? primary 'Villemagne, B.' 5 ? primary 'Prevet, H.' 6 ? primary 'Deprez, B.' 7 ? primary 'Moune, M.' 8 ? primary 'Peree, H.' 9 ? primary 'Meyer, F.' 10 ? primary 'Baulard, A.R.' 11 ? primary 'Willand, N.' 12 ? primary 'Wintjens, R.' 13 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 6HO5 _cell.details ? _cell.formula_units_Z ? _cell.length_a 120.890 _cell.length_a_esd ? _cell.length_b 120.890 _cell.length_b_esd ? _cell.length_c 33.760 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6HO5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'HTH-type transcriptional regulator EthR' 24927.980 1 ? ? ? ? 2 non-polymer syn "4-(4-oxidanylidene-1'-propan-2-yl-spiro[3~{H}-chromene-2,4'-piperidine]-6-yl)-~{N}-(phenylmethyl)benzamide" 468.587 1 ? ? ? ? 3 water nat water 18.015 7 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MTTSAASQASLPMTTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSK EAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATSVEVAELWSTFMQKWIAY TAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR ; _entity_poly.pdbx_seq_one_letter_code_can ;MTTSAASQASLPMTTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSK EAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATSVEVAELWSTFMQKWIAY TAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 THR n 1 3 THR n 1 4 SER n 1 5 ALA n 1 6 ALA n 1 7 SER n 1 8 GLN n 1 9 ALA n 1 10 SER n 1 11 LEU n 1 12 PRO n 1 13 MET n 1 14 THR n 1 15 THR n 1 16 SER n 1 17 ALA n 1 18 ALA n 1 19 SER n 1 20 GLN n 1 21 ALA n 1 22 SER n 1 23 LEU n 1 24 PRO n 1 25 ARG n 1 26 GLY n 1 27 ARG n 1 28 ARG n 1 29 THR n 1 30 ALA n 1 31 ARG n 1 32 PRO n 1 33 SER n 1 34 GLY n 1 35 ASP n 1 36 ASP n 1 37 ARG n 1 38 GLU n 1 39 LEU n 1 40 ALA n 1 41 ILE n 1 42 LEU n 1 43 ALA n 1 44 THR n 1 45 ALA n 1 46 GLU n 1 47 ASN n 1 48 LEU n 1 49 LEU n 1 50 GLU n 1 51 ASP n 1 52 ARG n 1 53 PRO n 1 54 LEU n 1 55 ALA n 1 56 ASP n 1 57 ILE n 1 58 SER n 1 59 VAL n 1 60 ASP n 1 61 ASP n 1 62 LEU n 1 63 ALA n 1 64 LYS n 1 65 GLY n 1 66 ALA n 1 67 GLY n 1 68 ILE n 1 69 SER n 1 70 ARG n 1 71 PRO n 1 72 THR n 1 73 PHE n 1 74 TYR n 1 75 PHE n 1 76 TYR n 1 77 PHE n 1 78 PRO n 1 79 SER n 1 80 LYS n 1 81 GLU n 1 82 ALA n 1 83 VAL n 1 84 LEU n 1 85 LEU n 1 86 THR n 1 87 LEU n 1 88 LEU n 1 89 ASP n 1 90 ARG n 1 91 VAL n 1 92 VAL n 1 93 ASN n 1 94 GLN n 1 95 ALA n 1 96 ASP n 1 97 MET n 1 98 ALA n 1 99 LEU n 1 100 GLN n 1 101 THR n 1 102 LEU n 1 103 ALA n 1 104 GLU n 1 105 ASN n 1 106 PRO n 1 107 ALA n 1 108 ASP n 1 109 THR n 1 110 ASP n 1 111 ARG n 1 112 GLU n 1 113 ASN n 1 114 MET n 1 115 TRP n 1 116 ARG n 1 117 THR n 1 118 GLY n 1 119 ILE n 1 120 ASN n 1 121 VAL n 1 122 PHE n 1 123 PHE n 1 124 GLU n 1 125 THR n 1 126 PHE n 1 127 GLY n 1 128 SER n 1 129 HIS n 1 130 LYS n 1 131 ALA n 1 132 VAL n 1 133 THR n 1 134 ARG n 1 135 ALA n 1 136 GLY n 1 137 GLN n 1 138 ALA n 1 139 ALA n 1 140 ARG n 1 141 ALA n 1 142 THR n 1 143 SER n 1 144 VAL n 1 145 GLU n 1 146 VAL n 1 147 ALA n 1 148 GLU n 1 149 LEU n 1 150 TRP n 1 151 SER n 1 152 THR n 1 153 PHE n 1 154 MET n 1 155 GLN n 1 156 LYS n 1 157 TRP n 1 158 ILE n 1 159 ALA n 1 160 TYR n 1 161 THR n 1 162 ALA n 1 163 ALA n 1 164 VAL n 1 165 ILE n 1 166 ASP n 1 167 ALA n 1 168 GLU n 1 169 ARG n 1 170 ASP n 1 171 ARG n 1 172 GLY n 1 173 ALA n 1 174 ALA n 1 175 PRO n 1 176 ARG n 1 177 THR n 1 178 LEU n 1 179 PRO n 1 180 ALA n 1 181 HIS n 1 182 GLU n 1 183 LEU n 1 184 ALA n 1 185 THR n 1 186 ALA n 1 187 LEU n 1 188 ASN n 1 189 LEU n 1 190 MET n 1 191 ASN n 1 192 GLU n 1 193 ARG n 1 194 THR n 1 195 LEU n 1 196 PHE n 1 197 ALA n 1 198 SER n 1 199 PHE n 1 200 ALA n 1 201 GLY n 1 202 GLU n 1 203 GLN n 1 204 PRO n 1 205 SER n 1 206 VAL n 1 207 PRO n 1 208 GLU n 1 209 ALA n 1 210 ARG n 1 211 VAL n 1 212 LEU n 1 213 ASP n 1 214 THR n 1 215 LEU n 1 216 VAL n 1 217 HIS n 1 218 ILE n 1 219 TRP n 1 220 VAL n 1 221 THR n 1 222 SER n 1 223 ILE n 1 224 TYR n 1 225 GLY n 1 226 GLU n 1 227 ASN n 1 228 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 228 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'ethR, etaR, MT3970' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mycobacterium tuberculosis CDC1551' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83331 _entity_src_gen.pdbx_gene_src_variant 'CDC51 / Oshkosh' _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code ETHR_MYCTO _struct_ref.pdbx_db_accession P9WMC0 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MTTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRVV NQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRG AAPRTLPAHELATALNLMNERTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6HO5 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 13 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 228 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P9WMC0 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 216 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 216 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6HO5 MET A 1 ? UNP P9WMC0 ? ? 'initiating methionine' -11 1 1 6HO5 THR A 2 ? UNP P9WMC0 ? ? 'expression tag' -10 2 1 6HO5 THR A 3 ? UNP P9WMC0 ? ? 'expression tag' -9 3 1 6HO5 SER A 4 ? UNP P9WMC0 ? ? 'expression tag' -8 4 1 6HO5 ALA A 5 ? UNP P9WMC0 ? ? 'expression tag' -7 5 1 6HO5 ALA A 6 ? UNP P9WMC0 ? ? 'expression tag' -6 6 1 6HO5 SER A 7 ? UNP P9WMC0 ? ? 'expression tag' -5 7 1 6HO5 GLN A 8 ? UNP P9WMC0 ? ? 'expression tag' -4 8 1 6HO5 ALA A 9 ? UNP P9WMC0 ? ? 'expression tag' -3 9 1 6HO5 SER A 10 ? UNP P9WMC0 ? ? 'expression tag' -2 10 1 6HO5 LEU A 11 ? UNP P9WMC0 ? ? 'expression tag' -1 11 1 6HO5 PRO A 12 ? UNP P9WMC0 ? ? 'expression tag' 0 12 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GH8 non-polymer . "4-(4-oxidanylidene-1'-propan-2-yl-spiro[3~{H}-chromene-2,4'-piperidine]-6-yl)-~{N}-(phenylmethyl)benzamide" ? 'C30 H32 N2 O3' 468.587 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6HO5 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.39 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 48.49 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.7 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '1.4-1.6 ammonium sulfate, 15% glycerol, 100 mM MES' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2010-12-06 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SLS BEAMLINE X06SA' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.00 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline X06SA _diffrn_source.pdbx_synchrotron_site SLS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6HO5 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.30 _reflns.d_resolution_low 42.74 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 11677 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 12.4 _reflns.pdbx_Rmerge_I_obs 0.266 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 14.7 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.30 _reflns_shell.d_res_low 2.44 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.8 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1827 _reflns_shell.percent_possible_all 99.7 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 1.166 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 13.1 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -0.03 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][2] -0.03 _refine.aniso_B[2][3] 0.00 _refine.aniso_B[3][3] 0.06 _refine.B_iso_max ? _refine.B_iso_mean 37.190 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.944 _refine.correlation_coeff_Fo_to_Fc_free 0.920 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6HO5 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.30 _refine.ls_d_res_low 42.74 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 11093 _refine.ls_number_reflns_R_free 584 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.87 _refine.ls_percent_reflns_R_free 5.0 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.20956 _refine.ls_R_factor_R_free 0.25126 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.20733 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.268 _refine.pdbx_overall_ESU_R_Free 0.218 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 7.688 _refine.overall_SU_ML 0.179 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 1482 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 35 _refine_hist.number_atoms_solvent 7 _refine_hist.number_atoms_total 1524 _refine_hist.d_res_high 2.30 _refine_hist.d_res_low 42.74 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.008 0.013 1552 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.001 0.017 1436 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.453 1.678 2119 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.349 1.598 3302 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 5.389 5.000 189 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 34.804 21.294 85 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 15.343 15.000 239 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 15.140 15.000 13 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.067 0.200 209 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.007 0.020 1749 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 350 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 2.591 3.772 759 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 2.590 3.770 758 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 3.829 5.649 947 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 3.827 5.652 948 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 3.361 4.165 793 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 3.359 4.164 794 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 5.203 6.073 1173 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 6.539 44.105 1748 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 6.538 44.096 1748 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.299 _refine_ls_shell.d_res_low 2.358 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 41 _refine_ls_shell.number_reflns_R_work 791 _refine_ls_shell.percent_reflns_obs 99.05 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.297 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.284 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6HO5 _struct.title 'TRANSCRIPTIONAL REPRESSOR ETHR FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH BDM44719' _struct.pdbx_descriptor 'HTH-type transcriptional regulator EthR' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6HO5 _struct_keywords.text 'HELIX-TURN-HELIX, DNA BINDING PROTEIN, TETR-FAMILY, COMPLEX, INHIBITOR, DRUG DESIGN, TUBERCULOSIS, ETHIONAMIDE' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ARG A 37 ? ARG A 52 ? ARG A 25 ARG A 40 1 ? 16 HELX_P HELX_P2 AA2 PRO A 53 ? ILE A 57 ? PRO A 41 ILE A 45 5 ? 5 HELX_P HELX_P3 AA3 SER A 58 ? GLY A 67 ? SER A 46 GLY A 55 1 ? 10 HELX_P HELX_P4 AA4 SER A 69 ? PHE A 77 ? SER A 57 PHE A 65 1 ? 9 HELX_P HELX_P5 AA5 SER A 79 ? ASN A 105 ? SER A 67 ASN A 93 1 ? 27 HELX_P HELX_P6 AA6 ASP A 110 ? SER A 128 ? ASP A 98 SER A 116 1 ? 19 HELX_P HELX_P7 AA7 HIS A 129 ? ALA A 139 ? HIS A 117 ALA A 127 1 ? 11 HELX_P HELX_P8 AA8 SER A 143 ? ARG A 171 ? SER A 131 ARG A 159 1 ? 29 HELX_P HELX_P9 AA9 PRO A 179 ? ALA A 200 ? PRO A 167 ALA A 188 1 ? 22 HELX_P HELX_P10 AB1 PRO A 207 ? GLY A 225 ? PRO A 195 GLY A 213 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLN _struct_mon_prot_cis.label_seq_id 203 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLN _struct_mon_prot_cis.auth_seq_id 191 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 204 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 192 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 2.33 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id GH8 _struct_site.pdbx_auth_seq_id 301 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 18 _struct_site.details 'binding site for residue GH8 A 301' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 18 LEU A 99 ? LEU A 87 . ? 1_555 ? 2 AC1 18 LEU A 102 ? LEU A 90 . ? 1_555 ? 3 AC1 18 MET A 114 ? MET A 102 . ? 1_555 ? 4 AC1 18 TRP A 115 ? TRP A 103 . ? 1_555 ? 5 AC1 18 GLY A 118 ? GLY A 106 . ? 1_555 ? 6 AC1 18 PHE A 122 ? PHE A 110 . ? 1_555 ? 7 AC1 18 PHE A 126 ? PHE A 114 . ? 1_555 ? 8 AC1 18 TRP A 150 ? TRP A 138 . ? 1_555 ? 9 AC1 18 TRP A 157 ? TRP A 145 . ? 1_555 ? 10 AC1 18 TYR A 160 ? TYR A 148 . ? 1_555 ? 11 AC1 18 THR A 161 ? THR A 149 . ? 1_555 ? 12 AC1 18 VAL A 164 ? VAL A 152 . ? 1_555 ? 13 AC1 18 GLU A 168 ? GLU A 156 . ? 1_555 ? 14 AC1 18 ASN A 188 ? ASN A 176 . ? 1_555 ? 15 AC1 18 ASN A 191 ? ASN A 179 . ? 1_555 ? 16 AC1 18 GLU A 192 ? GLU A 180 . ? 1_555 ? 17 AC1 18 PHE A 196 ? PHE A 184 . ? 1_555 ? 18 AC1 18 TRP A 219 ? TRP A 207 . ? 1_555 ? # _atom_sites.entry_id 6HO5 _atom_sites.fract_transf_matrix[1][1] 0.008272 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008272 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.029621 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -11 ? ? ? A . n A 1 2 THR 2 -10 ? ? ? A . n A 1 3 THR 3 -9 ? ? ? A . n A 1 4 SER 4 -8 ? ? ? A . n A 1 5 ALA 5 -7 ? ? ? A . n A 1 6 ALA 6 -6 ? ? ? A . n A 1 7 SER 7 -5 ? ? ? A . n A 1 8 GLN 8 -4 ? ? ? A . n A 1 9 ALA 9 -3 ? ? ? A . n A 1 10 SER 10 -2 ? ? ? A . n A 1 11 LEU 11 -1 ? ? ? A . n A 1 12 PRO 12 0 ? ? ? A . n A 1 13 MET 13 1 ? ? ? A . n A 1 14 THR 14 2 ? ? ? A . n A 1 15 THR 15 3 ? ? ? A . n A 1 16 SER 16 4 ? ? ? A . n A 1 17 ALA 17 5 ? ? ? A . n A 1 18 ALA 18 6 ? ? ? A . n A 1 19 SER 19 7 ? ? ? A . n A 1 20 GLN 20 8 ? ? ? A . n A 1 21 ALA 21 9 ? ? ? A . n A 1 22 SER 22 10 ? ? ? A . n A 1 23 LEU 23 11 ? ? ? A . n A 1 24 PRO 24 12 ? ? ? A . n A 1 25 ARG 25 13 ? ? ? A . n A 1 26 GLY 26 14 ? ? ? A . n A 1 27 ARG 27 15 ? ? ? A . n A 1 28 ARG 28 16 ? ? ? A . n A 1 29 THR 29 17 ? ? ? A . n A 1 30 ALA 30 18 ? ? ? A . n A 1 31 ARG 31 19 ? ? ? A . n A 1 32 PRO 32 20 ? ? ? A . n A 1 33 SER 33 21 ? ? ? A . n A 1 34 GLY 34 22 ? ? ? A . n A 1 35 ASP 35 23 ? ? ? A . n A 1 36 ASP 36 24 ? ? ? A . n A 1 37 ARG 37 25 25 ARG ARG A . n A 1 38 GLU 38 26 26 GLU GLU A . n A 1 39 LEU 39 27 27 LEU LEU A . n A 1 40 ALA 40 28 28 ALA ALA A . n A 1 41 ILE 41 29 29 ILE ILE A . n A 1 42 LEU 42 30 30 LEU LEU A . n A 1 43 ALA 43 31 31 ALA ALA A . n A 1 44 THR 44 32 32 THR THR A . n A 1 45 ALA 45 33 33 ALA ALA A . n A 1 46 GLU 46 34 34 GLU GLU A . n A 1 47 ASN 47 35 35 ASN ASN A . n A 1 48 LEU 48 36 36 LEU LEU A . n A 1 49 LEU 49 37 37 LEU LEU A . n A 1 50 GLU 50 38 38 GLU GLU A . n A 1 51 ASP 51 39 39 ASP ASP A . n A 1 52 ARG 52 40 40 ARG ARG A . n A 1 53 PRO 53 41 41 PRO PRO A . n A 1 54 LEU 54 42 42 LEU LEU A . n A 1 55 ALA 55 43 43 ALA ALA A . n A 1 56 ASP 56 44 44 ASP ASP A . n A 1 57 ILE 57 45 45 ILE ILE A . n A 1 58 SER 58 46 46 SER SER A . n A 1 59 VAL 59 47 47 VAL VAL A . n A 1 60 ASP 60 48 48 ASP ASP A . n A 1 61 ASP 61 49 49 ASP ASP A . n A 1 62 LEU 62 50 50 LEU LEU A . n A 1 63 ALA 63 51 51 ALA ALA A . n A 1 64 LYS 64 52 52 LYS LYS A . n A 1 65 GLY 65 53 53 GLY GLY A . n A 1 66 ALA 66 54 54 ALA ALA A . n A 1 67 GLY 67 55 55 GLY GLY A . n A 1 68 ILE 68 56 56 ILE ILE A . n A 1 69 SER 69 57 57 SER SER A . n A 1 70 ARG 70 58 58 ARG ARG A . n A 1 71 PRO 71 59 59 PRO PRO A . n A 1 72 THR 72 60 60 THR THR A . n A 1 73 PHE 73 61 61 PHE PHE A . n A 1 74 TYR 74 62 62 TYR TYR A . n A 1 75 PHE 75 63 63 PHE PHE A . n A 1 76 TYR 76 64 64 TYR TYR A . n A 1 77 PHE 77 65 65 PHE PHE A . n A 1 78 PRO 78 66 66 PRO PRO A . n A 1 79 SER 79 67 67 SER SER A . n A 1 80 LYS 80 68 68 LYS LYS A . n A 1 81 GLU 81 69 69 GLU GLU A . n A 1 82 ALA 82 70 70 ALA ALA A . n A 1 83 VAL 83 71 71 VAL VAL A . n A 1 84 LEU 84 72 72 LEU LEU A . n A 1 85 LEU 85 73 73 LEU LEU A . n A 1 86 THR 86 74 74 THR THR A . n A 1 87 LEU 87 75 75 LEU LEU A . n A 1 88 LEU 88 76 76 LEU LEU A . n A 1 89 ASP 89 77 77 ASP ASP A . n A 1 90 ARG 90 78 78 ARG ARG A . n A 1 91 VAL 91 79 79 VAL VAL A . n A 1 92 VAL 92 80 80 VAL VAL A . n A 1 93 ASN 93 81 81 ASN ASN A . n A 1 94 GLN 94 82 82 GLN GLN A . n A 1 95 ALA 95 83 83 ALA ALA A . n A 1 96 ASP 96 84 84 ASP ASP A . n A 1 97 MET 97 85 85 MET MET A . n A 1 98 ALA 98 86 86 ALA ALA A . n A 1 99 LEU 99 87 87 LEU LEU A . n A 1 100 GLN 100 88 88 GLN GLN A . n A 1 101 THR 101 89 89 THR THR A . n A 1 102 LEU 102 90 90 LEU LEU A . n A 1 103 ALA 103 91 91 ALA ALA A . n A 1 104 GLU 104 92 92 GLU GLU A . n A 1 105 ASN 105 93 93 ASN ASN A . n A 1 106 PRO 106 94 94 PRO PRO A . n A 1 107 ALA 107 95 95 ALA ALA A . n A 1 108 ASP 108 96 96 ASP ASP A . n A 1 109 THR 109 97 97 THR THR A . n A 1 110 ASP 110 98 98 ASP ASP A . n A 1 111 ARG 111 99 99 ARG ARG A . n A 1 112 GLU 112 100 100 GLU GLU A . n A 1 113 ASN 113 101 101 ASN ASN A . n A 1 114 MET 114 102 102 MET MET A . n A 1 115 TRP 115 103 103 TRP TRP A . n A 1 116 ARG 116 104 104 ARG ARG A . n A 1 117 THR 117 105 105 THR THR A . n A 1 118 GLY 118 106 106 GLY GLY A . n A 1 119 ILE 119 107 107 ILE ILE A . n A 1 120 ASN 120 108 108 ASN ASN A . n A 1 121 VAL 121 109 109 VAL VAL A . n A 1 122 PHE 122 110 110 PHE PHE A . n A 1 123 PHE 123 111 111 PHE PHE A . n A 1 124 GLU 124 112 112 GLU GLU A . n A 1 125 THR 125 113 113 THR THR A . n A 1 126 PHE 126 114 114 PHE PHE A . n A 1 127 GLY 127 115 115 GLY GLY A . n A 1 128 SER 128 116 116 SER SER A . n A 1 129 HIS 129 117 117 HIS HIS A . n A 1 130 LYS 130 118 118 LYS LYS A . n A 1 131 ALA 131 119 119 ALA ALA A . n A 1 132 VAL 132 120 120 VAL VAL A . n A 1 133 THR 133 121 121 THR THR A . n A 1 134 ARG 134 122 122 ARG ARG A . n A 1 135 ALA 135 123 123 ALA ALA A . n A 1 136 GLY 136 124 124 GLY GLY A . n A 1 137 GLN 137 125 125 GLN GLN A . n A 1 138 ALA 138 126 126 ALA ALA A . n A 1 139 ALA 139 127 127 ALA ALA A . n A 1 140 ARG 140 128 128 ARG ARG A . n A 1 141 ALA 141 129 129 ALA ALA A . n A 1 142 THR 142 130 130 THR THR A . n A 1 143 SER 143 131 131 SER SER A . n A 1 144 VAL 144 132 132 VAL VAL A . n A 1 145 GLU 145 133 133 GLU GLU A . n A 1 146 VAL 146 134 134 VAL VAL A . n A 1 147 ALA 147 135 135 ALA ALA A . n A 1 148 GLU 148 136 136 GLU GLU A . n A 1 149 LEU 149 137 137 LEU LEU A . n A 1 150 TRP 150 138 138 TRP TRP A . n A 1 151 SER 151 139 139 SER SER A . n A 1 152 THR 152 140 140 THR THR A . n A 1 153 PHE 153 141 141 PHE PHE A . n A 1 154 MET 154 142 142 MET MET A . n A 1 155 GLN 155 143 143 GLN GLN A . n A 1 156 LYS 156 144 144 LYS LYS A . n A 1 157 TRP 157 145 145 TRP TRP A . n A 1 158 ILE 158 146 146 ILE ILE A . n A 1 159 ALA 159 147 147 ALA ALA A . n A 1 160 TYR 160 148 148 TYR TYR A . n A 1 161 THR 161 149 149 THR THR A . n A 1 162 ALA 162 150 150 ALA ALA A . n A 1 163 ALA 163 151 151 ALA ALA A . n A 1 164 VAL 164 152 152 VAL VAL A . n A 1 165 ILE 165 153 153 ILE ILE A . n A 1 166 ASP 166 154 154 ASP ASP A . n A 1 167 ALA 167 155 155 ALA ALA A . n A 1 168 GLU 168 156 156 GLU GLU A . n A 1 169 ARG 169 157 157 ARG ARG A . n A 1 170 ASP 170 158 158 ASP ASP A . n A 1 171 ARG 171 159 159 ARG ARG A . n A 1 172 GLY 172 160 160 GLY GLY A . n A 1 173 ALA 173 161 161 ALA ALA A . n A 1 174 ALA 174 162 162 ALA ALA A . n A 1 175 PRO 175 163 163 PRO PRO A . n A 1 176 ARG 176 164 164 ARG ARG A . n A 1 177 THR 177 165 165 THR THR A . n A 1 178 LEU 178 166 166 LEU LEU A . n A 1 179 PRO 179 167 167 PRO PRO A . n A 1 180 ALA 180 168 168 ALA ALA A . n A 1 181 HIS 181 169 169 HIS HIS A . n A 1 182 GLU 182 170 170 GLU GLU A . n A 1 183 LEU 183 171 171 LEU LEU A . n A 1 184 ALA 184 172 172 ALA ALA A . n A 1 185 THR 185 173 173 THR THR A . n A 1 186 ALA 186 174 174 ALA ALA A . n A 1 187 LEU 187 175 175 LEU LEU A . n A 1 188 ASN 188 176 176 ASN ASN A . n A 1 189 LEU 189 177 177 LEU LEU A . n A 1 190 MET 190 178 178 MET MET A . n A 1 191 ASN 191 179 179 ASN ASN A . n A 1 192 GLU 192 180 180 GLU GLU A . n A 1 193 ARG 193 181 181 ARG ARG A . n A 1 194 THR 194 182 182 THR THR A . n A 1 195 LEU 195 183 183 LEU LEU A . n A 1 196 PHE 196 184 184 PHE PHE A . n A 1 197 ALA 197 185 185 ALA ALA A . n A 1 198 SER 198 186 186 SER SER A . n A 1 199 PHE 199 187 187 PHE PHE A . n A 1 200 ALA 200 188 188 ALA ALA A . n A 1 201 GLY 201 189 189 GLY GLY A . n A 1 202 GLU 202 190 190 GLU GLU A . n A 1 203 GLN 203 191 191 GLN GLN A . n A 1 204 PRO 204 192 192 PRO PRO A . n A 1 205 SER 205 193 193 SER SER A . n A 1 206 VAL 206 194 194 VAL VAL A . n A 1 207 PRO 207 195 195 PRO PRO A . n A 1 208 GLU 208 196 196 GLU GLU A . n A 1 209 ALA 209 197 197 ALA ALA A . n A 1 210 ARG 210 198 198 ARG ARG A . n A 1 211 VAL 211 199 199 VAL VAL A . n A 1 212 LEU 212 200 200 LEU LEU A . n A 1 213 ASP 213 201 201 ASP ASP A . n A 1 214 THR 214 202 202 THR THR A . n A 1 215 LEU 215 203 203 LEU LEU A . n A 1 216 VAL 216 204 204 VAL VAL A . n A 1 217 HIS 217 205 205 HIS HIS A . n A 1 218 ILE 218 206 206 ILE ILE A . n A 1 219 TRP 219 207 207 TRP TRP A . n A 1 220 VAL 220 208 208 VAL VAL A . n A 1 221 THR 221 209 209 THR THR A . n A 1 222 SER 222 210 210 SER SER A . n A 1 223 ILE 223 211 211 ILE ILE A . n A 1 224 TYR 224 212 212 TYR TYR A . n A 1 225 GLY 225 213 213 GLY GLY A . n A 1 226 GLU 226 214 214 GLU GLU A . n A 1 227 ASN 227 215 ? ? ? A . n A 1 228 ARG 228 216 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GH8 1 301 1 GH8 LIG A . C 3 HOH 1 401 2 HOH HOH A . C 3 HOH 2 402 5 HOH HOH A . C 3 HOH 3 403 7 HOH HOH A . C 3 HOH 4 404 4 HOH HOH A . C 3 HOH 5 405 3 HOH HOH A . C 3 HOH 6 406 1 HOH HOH A . C 3 HOH 7 407 6 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2770 ? 1 MORE -21 ? 1 'SSA (A^2)' 17190 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_555 y,x,-z 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-12-26 2 'Structure model' 1 1 2019-01-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0232 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? iMOSFLM ? ? ? . 2 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 3 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 93 ? ? -118.54 71.70 2 1 HIS A 117 ? ? -141.13 51.98 3 1 THR A 165 ? ? -107.29 -106.92 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -11 ? A MET 1 2 1 Y 1 A THR -10 ? A THR 2 3 1 Y 1 A THR -9 ? A THR 3 4 1 Y 1 A SER -8 ? A SER 4 5 1 Y 1 A ALA -7 ? A ALA 5 6 1 Y 1 A ALA -6 ? A ALA 6 7 1 Y 1 A SER -5 ? A SER 7 8 1 Y 1 A GLN -4 ? A GLN 8 9 1 Y 1 A ALA -3 ? A ALA 9 10 1 Y 1 A SER -2 ? A SER 10 11 1 Y 1 A LEU -1 ? A LEU 11 12 1 Y 1 A PRO 0 ? A PRO 12 13 1 Y 1 A MET 1 ? A MET 13 14 1 Y 1 A THR 2 ? A THR 14 15 1 Y 1 A THR 3 ? A THR 15 16 1 Y 1 A SER 4 ? A SER 16 17 1 Y 1 A ALA 5 ? A ALA 17 18 1 Y 1 A ALA 6 ? A ALA 18 19 1 Y 1 A SER 7 ? A SER 19 20 1 Y 1 A GLN 8 ? A GLN 20 21 1 Y 1 A ALA 9 ? A ALA 21 22 1 Y 1 A SER 10 ? A SER 22 23 1 Y 1 A LEU 11 ? A LEU 23 24 1 Y 1 A PRO 12 ? A PRO 24 25 1 Y 1 A ARG 13 ? A ARG 25 26 1 Y 1 A GLY 14 ? A GLY 26 27 1 Y 1 A ARG 15 ? A ARG 27 28 1 Y 1 A ARG 16 ? A ARG 28 29 1 Y 1 A THR 17 ? A THR 29 30 1 Y 1 A ALA 18 ? A ALA 30 31 1 Y 1 A ARG 19 ? A ARG 31 32 1 Y 1 A PRO 20 ? A PRO 32 33 1 Y 1 A SER 21 ? A SER 33 34 1 Y 1 A GLY 22 ? A GLY 34 35 1 Y 1 A ASP 23 ? A ASP 35 36 1 Y 1 A ASP 24 ? A ASP 36 37 1 Y 1 A ASN 215 ? A ASN 227 38 1 Y 1 A ARG 216 ? A ARG 228 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "4-(4-oxidanylidene-1'-propan-2-yl-spiro[3~{H}-chromene-2,4'-piperidine]-6-yl)-~{N}-(phenylmethyl)benzamide" GH8 3 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #