HEADER PLANT PROTEIN 20-SEP-18 6HPG TITLE ARABIDOPSIS OM64 TPR DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: OUTER ENVELOPE PROTEIN 64, MITOCHONDRIAL; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 SYNONYM: MITOCHONDRIAL OUTER MEMBRANE PROTEIN 64,MTOM64,TRANSLOCON AT COMPND 5 THE OUTER MEMBRANE OF CHLOROPLASTS 64-V,ATTOC64-V; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: HEAT SHOCK PROTEIN 90-4; COMPND 9 CHAIN: a, b, c, d, e, f; COMPND 10 SYNONYM: ATHSP90-4,HEAT SHOCK PROTEIN 81-4,HSP81-4; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: MOUSE-EAR CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: OM64, TOC64-V, AT5G09420, T5E8.220; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 10 ORGANISM_COMMON: MOUSE-EAR CRESS; SOURCE 11 ORGANISM_TAXID: 3702; SOURCE 12 GENE: HSP90-4, HSP81-4, AT5G56000, MDA7.4; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TETRATRICO-PEPTIDE-REPEAT, MITOCHONDRIA, PROTEIN IMPORT, ARABODOPSIS KEYWDS 2 THALIANA, PLANT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.SCHWENKERT REVDAT 3 24-JAN-24 6HPG 1 REMARK REVDAT 2 09-JAN-19 6HPG 1 JRNL REVDAT 1 03-OCT-18 6HPG 0 JRNL AUTH C.NICKEL,R.HORNEFF,R.HEERMANN,B.NEUMANN,K.JUNG,J.SOLL, JRNL AUTH 2 S.SCHWENKERT JRNL TITL PHOSPHORYLATION OF THE OUTER MEMBRANE MITOCHONDRIAL PROTEIN JRNL TITL 2 OM64 INFLUENCES PROTEIN IMPORT INTO MITOCHONDRIA. JRNL REF MITOCHONDRION V. 44 93 2019 JRNL REFN ISSN 1872-8278 JRNL PMID 29374544 JRNL DOI 10.1016/J.MITO.2018.01.005 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.91 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.7 REMARK 3 NUMBER OF REFLECTIONS : 43064 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.265 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.300 REMARK 3 FREE R VALUE TEST SET COUNT : 2395 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3026 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 88.63 REMARK 3 BIN R VALUE (WORKING SET) : 0.3330 REMARK 3 BIN FREE R VALUE SET COUNT : 187 REMARK 3 BIN FREE R VALUE : 0.3190 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5988 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 609 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.09 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.64000 REMARK 3 B22 (A**2) : -2.64000 REMARK 3 B33 (A**2) : -0.54000 REMARK 3 B12 (A**2) : 0.69000 REMARK 3 B13 (A**2) : 0.01000 REMARK 3 B23 (A**2) : -0.90000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.241 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.217 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.182 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.886 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.898 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6078 ; 0.013 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 5963 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8122 ; 1.484 ; 1.954 REMARK 3 BOND ANGLES OTHERS (DEGREES): 13687 ; 0.963 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 746 ; 5.513 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 300 ;40.161 ;24.600 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1184 ;17.572 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 44 ;18.012 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 865 ; 0.083 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6923 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1417 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6HPG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-SEP-18. REMARK 100 THE DEPOSITION ID IS D_1200012004. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-NOV-15 REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : MASSIF-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.966000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : ADDREF REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.17 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45460 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 29.910 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.7 REMARK 200 DATA REDUNDANCY : 1.700 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.3 REMARK 200 DATA REDUNDANCY IN SHELL : 1.70 REMARK 200 R MERGE FOR SHELL (I) : 0.45400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: ACORN REMARK 200 STARTING MODEL: 2VYI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.11 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M CITRIC ACID, PH 3.5, 25 % (W/V) REMARK 280 PEG 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, a REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 990 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6950 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, b REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6940 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -3.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, c REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1010 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, d REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6940 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, e REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6800 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -3.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: F, f REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG B 600 REMARK 465 LYS B 601 REMARK 465 HIS B 602 REMARK 465 ILE B 603 REMARK 465 ARG C 600 REMARK 465 LYS C 601 REMARK 465 HIS C 602 REMARK 465 ILE C 603 REMARK 465 ARG E 600 REMARK 465 LYS E 601 REMARK 465 HIS E 602 REMARK 465 ILE E 603 REMARK 465 ARG F 600 REMARK 465 LYS F 601 REMARK 465 HIS F 602 REMARK 465 ILE F 603 REMARK 465 GLY c 0 REMARK 465 GLY e 0 REMARK 465 GLY f 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 701 O HOH A 783 1.99 REMARK 500 O HOH E 708 O HOH E 765 2.07 REMARK 500 O HOH C 764 O HOH C 773 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 702 O HOH F 724 1645 1.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 571 73.11 -101.20 REMARK 500 LYS B 502 33.09 72.30 REMARK 500 CYS B 536 32.99 74.65 REMARK 500 ASN B 589 106.11 -53.65 REMARK 500 GLN C 503 78.09 -100.15 REMARK 500 VAL C 570 28.56 43.81 REMARK 500 ARG D 571 73.27 -100.80 REMARK 500 ARG E 571 75.61 -114.97 REMARK 500 ARG F 571 75.38 -101.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH C 800 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH E 778 DISTANCE = 6.25 ANGSTROMS DBREF 6HPG A 483 603 UNP F4KCL7 OE64M_ARATH 483 603 DBREF 6HPG B 483 603 UNP F4KCL7 OE64M_ARATH 483 603 DBREF 6HPG C 483 603 UNP F4KCL7 OE64M_ARATH 483 603 DBREF 6HPG D 483 603 UNP F4KCL7 OE64M_ARATH 483 603 DBREF 6HPG E 483 603 UNP F4KCL7 OE64M_ARATH 483 603 DBREF 6HPG F 483 603 UNP F4KCL7 OE64M_ARATH 483 603 DBREF 6HPG a 0 7 UNP O03986 HS904_ARATH 692 699 DBREF 6HPG b 0 7 UNP O03986 HS904_ARATH 692 699 DBREF 6HPG c 0 7 UNP O03986 HS904_ARATH 692 699 DBREF 6HPG d 0 7 UNP O03986 HS904_ARATH 692 699 DBREF 6HPG e 0 7 UNP O03986 HS904_ARATH 692 699 DBREF 6HPG f 0 7 UNP O03986 HS904_ARATH 692 699 SEQRES 1 A 121 GLY ASN MET GLU ALA SER GLU VAL MET LYS GLU LYS GLY SEQRES 2 A 121 ASN ALA ALA TYR LYS GLY LYS GLN TRP ASN LYS ALA VAL SEQRES 3 A 121 ASN PHE TYR THR GLU ALA ILE LYS LEU ASN GLY ALA ASN SEQRES 4 A 121 ALA THR TYR TYR CYS ASN ARG ALA ALA ALA PHE LEU GLU SEQRES 5 A 121 LEU CYS CYS PHE GLN GLN ALA GLU GLN ASP CYS THR LYS SEQRES 6 A 121 ALA MET LEU ILE ASP LYS LYS ASN VAL LYS ALA TYR LEU SEQRES 7 A 121 ARG ARG GLY THR ALA ARG GLU SER LEU VAL ARG TYR LYS SEQRES 8 A 121 GLU ALA ALA ALA ASP PHE ARG HIS ALA LEU VAL LEU GLU SEQRES 9 A 121 PRO GLN ASN LYS THR ALA LYS VAL ALA GLU LYS ARG LEU SEQRES 10 A 121 ARG LYS HIS ILE SEQRES 1 B 121 GLY ASN MET GLU ALA SER GLU VAL MET LYS GLU LYS GLY SEQRES 2 B 121 ASN ALA ALA TYR LYS GLY LYS GLN TRP ASN LYS ALA VAL SEQRES 3 B 121 ASN PHE TYR THR GLU ALA ILE LYS LEU ASN GLY ALA ASN SEQRES 4 B 121 ALA THR TYR TYR CYS ASN ARG ALA ALA ALA PHE LEU GLU SEQRES 5 B 121 LEU CYS CYS PHE GLN GLN ALA GLU GLN ASP CYS THR LYS SEQRES 6 B 121 ALA MET LEU ILE ASP LYS LYS ASN VAL LYS ALA TYR LEU SEQRES 7 B 121 ARG ARG GLY THR ALA ARG GLU SER LEU VAL ARG TYR LYS SEQRES 8 B 121 GLU ALA ALA ALA ASP PHE ARG HIS ALA LEU VAL LEU GLU SEQRES 9 B 121 PRO GLN ASN LYS THR ALA LYS VAL ALA GLU LYS ARG LEU SEQRES 10 B 121 ARG LYS HIS ILE SEQRES 1 C 121 GLY ASN MET GLU ALA SER GLU VAL MET LYS GLU LYS GLY SEQRES 2 C 121 ASN ALA ALA TYR LYS GLY LYS GLN TRP ASN LYS ALA VAL SEQRES 3 C 121 ASN PHE TYR THR GLU ALA ILE LYS LEU ASN GLY ALA ASN SEQRES 4 C 121 ALA THR TYR TYR CYS ASN ARG ALA ALA ALA PHE LEU GLU SEQRES 5 C 121 LEU CYS CYS PHE GLN GLN ALA GLU GLN ASP CYS THR LYS SEQRES 6 C 121 ALA MET LEU ILE ASP LYS LYS ASN VAL LYS ALA TYR LEU SEQRES 7 C 121 ARG ARG GLY THR ALA ARG GLU SER LEU VAL ARG TYR LYS SEQRES 8 C 121 GLU ALA ALA ALA ASP PHE ARG HIS ALA LEU VAL LEU GLU SEQRES 9 C 121 PRO GLN ASN LYS THR ALA LYS VAL ALA GLU LYS ARG LEU SEQRES 10 C 121 ARG LYS HIS ILE SEQRES 1 D 121 GLY ASN MET GLU ALA SER GLU VAL MET LYS GLU LYS GLY SEQRES 2 D 121 ASN ALA ALA TYR LYS GLY LYS GLN TRP ASN LYS ALA VAL SEQRES 3 D 121 ASN PHE TYR THR GLU ALA ILE LYS LEU ASN GLY ALA ASN SEQRES 4 D 121 ALA THR TYR TYR CYS ASN ARG ALA ALA ALA PHE LEU GLU SEQRES 5 D 121 LEU CYS CYS PHE GLN GLN ALA GLU GLN ASP CYS THR LYS SEQRES 6 D 121 ALA MET LEU ILE ASP LYS LYS ASN VAL LYS ALA TYR LEU SEQRES 7 D 121 ARG ARG GLY THR ALA ARG GLU SER LEU VAL ARG TYR LYS SEQRES 8 D 121 GLU ALA ALA ALA ASP PHE ARG HIS ALA LEU VAL LEU GLU SEQRES 9 D 121 PRO GLN ASN LYS THR ALA LYS VAL ALA GLU LYS ARG LEU SEQRES 10 D 121 ARG LYS HIS ILE SEQRES 1 E 121 GLY ASN MET GLU ALA SER GLU VAL MET LYS GLU LYS GLY SEQRES 2 E 121 ASN ALA ALA TYR LYS GLY LYS GLN TRP ASN LYS ALA VAL SEQRES 3 E 121 ASN PHE TYR THR GLU ALA ILE LYS LEU ASN GLY ALA ASN SEQRES 4 E 121 ALA THR TYR TYR CYS ASN ARG ALA ALA ALA PHE LEU GLU SEQRES 5 E 121 LEU CYS CYS PHE GLN GLN ALA GLU GLN ASP CYS THR LYS SEQRES 6 E 121 ALA MET LEU ILE ASP LYS LYS ASN VAL LYS ALA TYR LEU SEQRES 7 E 121 ARG ARG GLY THR ALA ARG GLU SER LEU VAL ARG TYR LYS SEQRES 8 E 121 GLU ALA ALA ALA ASP PHE ARG HIS ALA LEU VAL LEU GLU SEQRES 9 E 121 PRO GLN ASN LYS THR ALA LYS VAL ALA GLU LYS ARG LEU SEQRES 10 E 121 ARG LYS HIS ILE SEQRES 1 F 121 GLY ASN MET GLU ALA SER GLU VAL MET LYS GLU LYS GLY SEQRES 2 F 121 ASN ALA ALA TYR LYS GLY LYS GLN TRP ASN LYS ALA VAL SEQRES 3 F 121 ASN PHE TYR THR GLU ALA ILE LYS LEU ASN GLY ALA ASN SEQRES 4 F 121 ALA THR TYR TYR CYS ASN ARG ALA ALA ALA PHE LEU GLU SEQRES 5 F 121 LEU CYS CYS PHE GLN GLN ALA GLU GLN ASP CYS THR LYS SEQRES 6 F 121 ALA MET LEU ILE ASP LYS LYS ASN VAL LYS ALA TYR LEU SEQRES 7 F 121 ARG ARG GLY THR ALA ARG GLU SER LEU VAL ARG TYR LYS SEQRES 8 F 121 GLU ALA ALA ALA ASP PHE ARG HIS ALA LEU VAL LEU GLU SEQRES 9 F 121 PRO GLN ASN LYS THR ALA LYS VAL ALA GLU LYS ARG LEU SEQRES 10 F 121 ARG LYS HIS ILE SEQRES 1 a 8 GLY SER LYS MET GLU GLU VAL ASP SEQRES 1 b 8 GLY SER LYS MET GLU GLU VAL ASP SEQRES 1 c 8 GLY SER LYS MET GLU GLU VAL ASP SEQRES 1 d 8 GLY SER LYS MET GLU GLU VAL ASP SEQRES 1 e 8 GLY SER LYS MET GLU GLU VAL ASP SEQRES 1 f 8 GLY SER LYS MET GLU GLU VAL ASP FORMUL 13 HOH *609(H2 O) HELIX 1 AA1 GLY A 483 GLY A 501 1 19 HELIX 2 AA2 GLN A 503 ASN A 518 1 16 HELIX 3 AA3 ASN A 521 LEU A 535 1 15 HELIX 4 AA4 CYS A 537 ASP A 552 1 16 HELIX 5 AA5 ASN A 555 LEU A 569 1 15 HELIX 6 AA6 ARG A 571 GLU A 586 1 16 HELIX 7 AA7 ASN A 589 LYS A 601 1 13 HELIX 8 AA8 ASN B 484 GLY B 501 1 18 HELIX 9 AA9 GLN B 503 ASN B 518 1 16 HELIX 10 AB1 ASN B 521 CYS B 536 1 16 HELIX 11 AB2 CYS B 537 ASP B 552 1 16 HELIX 12 AB3 ASN B 555 LEU B 569 1 15 HELIX 13 AB4 ARG B 571 GLU B 586 1 16 HELIX 14 AB5 ASN B 589 LEU B 599 1 11 HELIX 15 AB6 ASN C 484 GLY C 501 1 18 HELIX 16 AB7 GLN C 503 ASN C 518 1 16 HELIX 17 AB8 ASN C 521 LEU C 535 1 15 HELIX 18 AB9 CYS C 537 ASP C 552 1 16 HELIX 19 AC1 ASN C 555 LEU C 569 1 15 HELIX 20 AC2 ARG C 571 GLU C 586 1 16 HELIX 21 AC3 ASN C 589 LEU C 599 1 11 HELIX 22 AC4 ASN D 484 GLY D 501 1 18 HELIX 23 AC5 GLN D 503 ASN D 518 1 16 HELIX 24 AC6 ASN D 521 LEU D 535 1 15 HELIX 25 AC7 CYS D 537 ASP D 552 1 16 HELIX 26 AC8 ASN D 555 LEU D 569 1 15 HELIX 27 AC9 ARG D 571 GLU D 586 1 16 HELIX 28 AD1 ASN D 589 ARG D 600 1 12 HELIX 29 AD2 ASN E 484 GLY E 501 1 18 HELIX 30 AD3 GLN E 503 ASN E 518 1 16 HELIX 31 AD4 ASN E 521 LEU E 535 1 15 HELIX 32 AD5 CYS E 537 ASP E 552 1 16 HELIX 33 AD6 ASN E 555 LEU E 569 1 15 HELIX 34 AD7 ARG E 571 GLU E 586 1 16 HELIX 35 AD8 ASN E 589 LEU E 599 1 11 HELIX 36 AD9 ASN F 484 GLY F 501 1 18 HELIX 37 AE1 GLN F 503 ASN F 518 1 16 HELIX 38 AE2 ASN F 521 LEU F 535 1 15 HELIX 39 AE3 CYS F 537 ASP F 552 1 16 HELIX 40 AE4 ASN F 555 LEU F 569 1 15 HELIX 41 AE5 ARG F 571 GLU F 586 1 16 HELIX 42 AE6 ASN F 589 LEU F 599 1 11 CRYST1 29.388 61.135 106.563 87.57 87.99 78.26 P 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.034027 -0.007072 -0.000938 0.00000 SCALE2 0.000000 0.016707 -0.000604 0.00000 SCALE3 0.000000 0.000000 0.009396 0.00000