HEADER OXIDOREDUCTASE 25-SEP-18 6HQJ TITLE APO-FORM OF POLYPHENOL OXIDASE FROM SOLANUM LYCOPERSICUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLYPHENOL OXIDASE A, CHLOROPLASTIC; COMPND 3 CHAIN: A; COMPND 4 EC: 1.10.3.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SOLANUM LYCOPERSICUM; SOURCE 3 ORGANISM_COMMON: TOMATO; SOURCE 4 ORGANISM_TAXID: 4081; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS OXIDOREDUCTASE, POLYPHENOL OXIDASE, TYROSINASE EXPDTA X-RAY DIFFRACTION AUTHOR I.KAMPATSIKAS,A.BIJELIC,A.ROMPEL REVDAT 2 24-JAN-24 6HQJ 1 REMARK REVDAT 1 20-MAR-19 6HQJ 0 JRNL AUTH I.KAMPATSIKAS,A.BIJELIC,A.ROMPEL JRNL TITL BIOCHEMICAL AND STRUCTURAL CHARACTERIZATION OF TOMATO JRNL TITL 2 POLYPHENOL OXIDASES PROVIDE NOVEL INSIGHTS INTO THEIR JRNL TITL 3 SUBSTRATE SPECIFICITY. JRNL REF SCI REP V. 9 4022 2019 JRNL REFN ESSN 2045-2322 JRNL PMID 30858490 JRNL DOI 10.1038/S41598-019-39687-0 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.47 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 40853 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2043 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.4795 - 4.4434 0.98 2648 140 0.1496 0.1586 REMARK 3 2 4.4434 - 3.5274 0.99 2616 138 0.1320 0.1530 REMARK 3 3 3.5274 - 3.0817 0.99 2604 137 0.1512 0.2062 REMARK 3 4 3.0817 - 2.8000 0.99 2587 136 0.1642 0.2096 REMARK 3 5 2.8000 - 2.5993 0.99 2606 137 0.1577 0.2201 REMARK 3 6 2.5993 - 2.4461 1.00 2598 137 0.1625 0.2175 REMARK 3 7 2.4461 - 2.3236 1.00 2594 136 0.1546 0.2002 REMARK 3 8 2.3236 - 2.2225 1.00 2622 138 0.1615 0.2145 REMARK 3 9 2.2225 - 2.1369 0.98 2541 134 0.1711 0.1924 REMARK 3 10 2.1369 - 2.0632 0.99 2589 136 0.1803 0.2415 REMARK 3 11 2.0632 - 1.9987 0.99 2591 137 0.1874 0.2255 REMARK 3 12 1.9987 - 1.9415 0.99 2555 134 0.2012 0.2444 REMARK 3 13 1.9415 - 1.8904 0.99 2606 137 0.2232 0.2546 REMARK 3 14 1.8904 - 1.8443 0.99 2542 134 0.2421 0.2886 REMARK 3 15 1.8443 - 1.8024 0.97 2511 132 0.2887 0.2977 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.070 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3825 REMARK 3 ANGLE : 0.854 5197 REMARK 3 CHIRALITY : 0.053 546 REMARK 3 PLANARITY : 0.006 685 REMARK 3 DIHEDRAL : 14.106 2266 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 37 THROUGH 184 ) REMARK 3 ORIGIN FOR THE GROUP (A): 49.6554 28.0596 48.3486 REMARK 3 T TENSOR REMARK 3 T11: 0.1558 T22: 0.1627 REMARK 3 T33: 0.1862 T12: 0.0072 REMARK 3 T13: 0.0048 T23: 0.0129 REMARK 3 L TENSOR REMARK 3 L11: 0.7382 L22: 0.8112 REMARK 3 L33: 1.5499 L12: 0.3604 REMARK 3 L13: -0.1229 L23: 0.0248 REMARK 3 S TENSOR REMARK 3 S11: -0.0282 S12: 0.0918 S13: 0.0657 REMARK 3 S21: -0.0957 S22: 0.0285 S23: 0.0146 REMARK 3 S31: -0.1191 S32: 0.0362 S33: 0.0056 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 185 THROUGH 345 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.1985 21.9868 51.2911 REMARK 3 T TENSOR REMARK 3 T11: 0.1342 T22: 0.1528 REMARK 3 T33: 0.1883 T12: 0.0187 REMARK 3 T13: -0.0106 T23: 0.0005 REMARK 3 L TENSOR REMARK 3 L11: 1.1029 L22: 1.0536 REMARK 3 L33: 0.7631 L12: 0.5754 REMARK 3 L13: -0.2180 L23: -0.4345 REMARK 3 S TENSOR REMARK 3 S11: -0.0558 S12: 0.0388 S13: 0.0867 REMARK 3 S21: -0.0241 S22: 0.0593 S23: 0.0875 REMARK 3 S31: -0.0282 S32: -0.0811 S33: 0.0317 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 346 THROUGH 514 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.5443 13.2020 56.7972 REMARK 3 T TENSOR REMARK 3 T11: 0.1724 T22: 0.1860 REMARK 3 T33: 0.1983 T12: 0.0046 REMARK 3 T13: 0.0064 T23: -0.0005 REMARK 3 L TENSOR REMARK 3 L11: 2.8619 L22: 0.3935 REMARK 3 L33: 0.4244 L12: -0.0902 REMARK 3 L13: -0.0483 L23: -0.0957 REMARK 3 S TENSOR REMARK 3 S11: -0.0271 S12: -0.1149 S13: -0.0484 REMARK 3 S21: -0.0379 S22: 0.0412 S23: 0.0829 REMARK 3 S31: -0.0041 S32: -0.1621 S33: 0.0050 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6HQJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-SEP-18. REMARK 100 THE DEPOSITION ID IS D_1200012096. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-FEB-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID30B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9660 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40854 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 42.470 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 3.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.87 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6HQI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM SODIUM CITRATE PH 6.6, 13% PEG REMARK 280 8000, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 27.07000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 PRO A 2 REMARK 465 ILE A 3 REMARK 465 PRO A 4 REMARK 465 PRO A 5 REMARK 465 PRO A 6 REMARK 465 ASP A 7 REMARK 465 LEU A 8 REMARK 465 SER A 9 REMARK 465 SER A 10 REMARK 465 CYS A 11 REMARK 465 ASN A 12 REMARK 465 LYS A 13 REMARK 465 PRO A 14 REMARK 465 LYS A 15 REMARK 465 ILE A 16 REMARK 465 ASN A 17 REMARK 465 ALA A 18 REMARK 465 THR A 19 REMARK 465 THR A 20 REMARK 465 GLU A 21 REMARK 465 VAL A 22 REMARK 465 PRO A 23 REMARK 465 TYR A 24 REMARK 465 PHE A 25 REMARK 465 VAL A 450 REMARK 465 HIS A 451 REMARK 465 ARG A 452 REMARK 465 VAL A 453 REMARK 465 GLY A 454 REMARK 465 ASP A 455 REMARK 465 PRO A 456 REMARK 465 LYS A 457 REMARK 465 HIS A 458 REMARK 465 CYS A 506 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 CYS A 27 SG REMARK 470 THR A 225 OG1 CG2 REMARK 470 LEU A 226 CG CD1 CD2 REMARK 470 SER A 228 OG REMARK 470 THR A 229 OG1 CG2 REMARK 470 PRO A 257 CG CD REMARK 470 ASP A 258 CG OD1 OD2 REMARK 470 LYS A 260 CG CD CE NZ REMARK 470 ILE A 261 CG1 CG2 CD1 REMARK 470 HIS A 449 CG ND1 CD2 CE1 NE2 REMARK 470 ASP A 505 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 752 O HOH A 803 1.81 REMARK 500 O HOH A 886 O HOH A 976 1.82 REMARK 500 O HOH A 848 O HOH A 933 1.84 REMARK 500 O HOH A 746 O HOH A 891 1.88 REMARK 500 O HOH A 995 O HOH A 1010 1.89 REMARK 500 SG CYS A 97 CE1 HIS A 111 1.93 REMARK 500 OE1 GLN A 194 O HOH A 601 1.94 REMARK 500 O HOH A 663 O HOH A 801 1.95 REMARK 500 O HOH A 659 O HOH A 935 1.96 REMARK 500 NE2 GLN A 401 O HOH A 602 2.03 REMARK 500 ND1 HIS A 93 O HOH A 603 2.05 REMARK 500 O HOH A 1003 O HOH A 1004 2.18 REMARK 500 O HOH A 940 O HOH A 955 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 976 O HOH A 978 2657 2.08 REMARK 500 O HOH A 732 O HOH A 1007 2646 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 176 -152.94 -100.79 REMARK 500 VAL A 210 -75.12 -116.87 REMARK 500 THR A 225 -86.56 -86.16 REMARK 500 LEU A 226 -178.61 -65.15 REMARK 500 ASN A 414 0.20 -69.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1055 DISTANCE = 5.92 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6HQI RELATED DB: PDB REMARK 900 6HQI IS THE HOLO-FORM OF THIS PROTEIN DBREF 6HQJ A 1 506 PDB 6HQJ 6HQJ 1 506 SEQRES 1 A 506 ALA PRO ILE PRO PRO PRO ASP LEU SER SER CYS ASN LYS SEQRES 2 A 506 PRO LYS ILE ASN ALA THR THR GLU VAL PRO TYR PHE CYS SEQRES 3 A 506 CYS ALA PRO LYS PRO ASP ASP MET SER LYS VAL PRO TYR SEQRES 4 A 506 TYR LYS PHE PRO SER VAL THR LYS LEU ARG ILE ARG PRO SEQRES 5 A 506 PRO ALA HIS ALA LEU ASP GLU ALA TYR ILE ALA LYS TYR SEQRES 6 A 506 ASN LEU ALA ILE SER ARG MET LYS ASP LEU ASP LYS THR SEQRES 7 A 506 GLN PRO ASP ASN PRO ILE GLY PHE LYS GLN GLN ALA ASN SEQRES 8 A 506 ILE HIS CYS ALA TYR CYS ASN GLY GLY TYR SER ILE ASP SEQRES 9 A 506 GLY LYS VAL LEU GLN VAL HIS ASN SER TRP LEU PHE PHE SEQRES 10 A 506 PRO PHE HIS ARG TRP TYR LEU TYR PHE TYR GLU ARG ILE SEQRES 11 A 506 LEU GLY SER LEU ILE ASP ASP PRO THR PHE GLY LEU PRO SEQRES 12 A 506 PHE TRP ASN TRP ASP HIS PRO LYS GLY MET ARG PHE PRO SEQRES 13 A 506 PRO MET PHE ASP VAL PRO GLY THR ALA LEU TYR ASP GLU SEQRES 14 A 506 ARG ARG GLY ASP GLN ILE HIS ASN GLY ASN PHE ILE ASP SEQRES 15 A 506 LEU GLY SER PHE GLY ASP GLN VAL GLU THR THR GLN LEU SEQRES 16 A 506 GLN LEU MET THR ASN ASN LEU THR LEU MET TYR ARG GLN SEQRES 17 A 506 LEU VAL THR ASN SER PRO CYS PRO LEU MET PHE PHE GLY SEQRES 18 A 506 GLY PRO TYR THR LEU GLY SER THR VAL GLU ALA ALA GLY SEQRES 19 A 506 THR VAL GLU ASN ILE PRO HIS SER PRO VAL HIS ILE TRP SEQRES 20 A 506 VAL GLY THR ARG ARG GLY SER VAL LEU PRO ASP GLY LYS SEQRES 21 A 506 ILE SER ASN GLY GLU ASP MET GLY ASN PHE TYR SER ALA SEQRES 22 A 506 GLY LEU ASP PRO LEU PHE TYR CYS HIS HIS SER ASN VAL SEQRES 23 A 506 ASP ARG MET TRP ASN GLU TRP LYS ALA THR GLY GLY LYS SEQRES 24 A 506 ARG THR ASP LEU GLN ASN LYS ASP TRP LEU ASN SER GLU SEQRES 25 A 506 PHE PHE PHE TYR ASP GLU ASN GLY ASN PRO PHE LYS VAL SEQRES 26 A 506 ARG VAL ARG ASP CYS LEU ASP THR LYS LYS MET GLY TYR SEQRES 27 A 506 ASP TYR GLN PRO THR ALA THR PRO TRP ARG ASN PHE LYS SEQRES 28 A 506 PRO LYS THR LYS ALA SER ALA GLY LYS VAL ASN THR GLY SEQRES 29 A 506 SER ILE PRO PRO GLU SER GLN VAL PHE PRO LEU ALA LYS SEQRES 30 A 506 LEU ASP LYS ALA ILE SER PHE SER ILE ASN ARG PRO ALA SEQRES 31 A 506 SER SER ARG THR GLN GLN GLU LYS ASN ALA GLN GLU GLU SEQRES 32 A 506 VAL LEU THR PHE ASN ALA ILE LYS TYR ASP ASN ARG ASP SEQRES 33 A 506 TYR ILE ARG PHE ASP VAL PHE LEU ASN VAL ASP ASN ASN SEQRES 34 A 506 VAL ASN ALA ASN GLU LEU ASP LYS ALA GLU PHE ALA GLY SEQRES 35 A 506 SER TYR THR SER LEU PRO HIS VAL HIS ARG VAL GLY ASP SEQRES 36 A 506 PRO LYS HIS THR ALA THR ALA THR LEU ARG LEU ALA ILE SEQRES 37 A 506 THR GLU LEU LEU GLU ASP ILE GLY LEU GLU ASP GLU ASP SEQRES 38 A 506 THR ILE ALA VAL THR LEU VAL PRO LYS LYS GLY ASP ILE SEQRES 39 A 506 SER ILE GLY GLY VAL GLU ILE LYS LEU ALA ASP CYS FORMUL 2 HOH *455(H2 O) HELIX 1 AA1 ASP A 33 VAL A 37 5 5 HELIX 2 AA2 ASP A 58 GLN A 79 1 22 HELIX 3 AA3 GLY A 85 ASN A 98 1 14 HELIX 4 AA4 LEU A 115 ILE A 135 1 21 HELIX 5 AA5 HIS A 149 MET A 153 5 5 HELIX 6 AA6 PRO A 156 VAL A 161 5 6 HELIX 7 AA7 THR A 193 VAL A 210 1 18 HELIX 8 AA8 CYS A 215 GLY A 221 1 7 HELIX 9 AA9 GLY A 234 ILE A 239 1 6 HELIX 10 AB1 PRO A 240 GLY A 249 1 10 HELIX 11 AB2 SER A 272 ASP A 276 5 5 HELIX 12 AB3 PRO A 277 ALA A 295 1 19 HELIX 13 AB4 ASN A 305 ASN A 310 1 6 HELIX 14 AB5 ARG A 328 CYS A 330 5 3 HELIX 15 AB6 ASP A 332 GLY A 337 1 6 HELIX 16 AB7 THR A 345 PHE A 350 5 6 HELIX 17 AB8 ASN A 362 ILE A 366 5 5 HELIX 18 AB9 PRO A 368 PHE A 373 1 6 HELIX 19 AC1 THR A 394 GLN A 401 1 8 HELIX 20 AC2 ILE A 468 GLY A 476 1 9 SHEET 1 AA1 2 ARG A 49 ARG A 51 0 SHEET 2 AA1 2 TYR A 338 TYR A 340 1 O ASP A 339 N ARG A 51 SHEET 1 AA2 2 SER A 102 ILE A 103 0 SHEET 2 AA2 2 LYS A 106 VAL A 107 -1 O LYS A 106 N ILE A 103 SHEET 1 AA3 2 GLU A 312 TYR A 316 0 SHEET 2 AA3 2 PRO A 322 ARG A 326 -1 O PHE A 323 N PHE A 315 SHEET 1 AA4 4 ILE A 382 ASN A 387 0 SHEET 2 AA4 4 THR A 482 LYS A 491 -1 O VAL A 485 N PHE A 384 SHEET 3 AA4 4 ILE A 418 LEU A 424 -1 N PHE A 423 O THR A 486 SHEET 4 AA4 4 PHE A 440 SER A 446 -1 O ALA A 441 N VAL A 422 SHEET 1 AA5 3 ALA A 460 ALA A 467 0 SHEET 2 AA5 3 GLU A 402 TYR A 412 -1 N LEU A 405 O LEU A 466 SHEET 3 AA5 3 SER A 495 ALA A 504 -1 O GLU A 500 N THR A 406 SSBOND 1 CYS A 26 CYS A 94 1555 1555 2.16 CISPEP 1 GLY A 227 SER A 228 0 1.58 CISPEP 2 ILE A 239 PRO A 240 0 12.13 CISPEP 3 GLU A 265 ASP A 266 0 0.34 CISPEP 4 PHE A 373 PRO A 374 0 2.12 CRYST1 60.800 54.140 69.770 90.00 101.08 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016447 0.000000 0.003221 0.00000 SCALE2 0.000000 0.018471 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014605 0.00000