HEADER HYDROLASE 26-SEP-18 6HRG TITLE STRUCTURE OF IGNI18, A NOVEL METALLO HYDROLASE FROM THE TITLE 2 HYPERTHERMOPHILIC ARCHAEON IGNICOCCUS HOSPITALIS KIN4/I COMPND MOL_ID: 1; COMPND 2 MOLECULE: UPF0173 METAL-DEPENDENT HYDROLASE IGNI_1254; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: IGNICOCCUS HOSPITALIS; SOURCE 3 ORGANISM_TAXID: 160233; SOURCE 4 GENE: IGNI_1254; SOURCE 5 EXPRESSION_SYSTEM: KOMAGATAELLA PASTORIS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 4922 KEYWDS IGNOCOCCUS HOSPITALIS, HYDROLASE, METALLO-B-LACTAMASE EXPDTA X-RAY DIFFRACTION AUTHOR S.H.SMITS,W.R.STREIT,K.E.JAEGER,A.HOEPPNER REVDAT 2 17-MAR-21 6HRG 1 JRNL LINK REVDAT 1 09-OCT-19 6HRG 0 JRNL AUTH P.PEREZ-GARCIA,S.KOBUS,C.G.W.GERTZEN,A.HOEPPNER, JRNL AUTH 2 N.HOLZSCHECK,C.H.STRUNK,H.HUBER,K.E.JAEGER,H.GOHLKE, JRNL AUTH 3 F.KOVACIC,S.H.J.SMITS,W.R.STREIT,J.CHOW JRNL TITL A PROMISCUOUS ANCESTRAL ENZYME ́S STRUCTURE UNVEILS PROTEIN JRNL TITL 2 VARIABLE REGIONS OF THE HIGHLY DIVERSE JRNL TITL 3 METALLO-BETA-LACTAMASE FAMILY. JRNL REF COMMUN BIOL V. 4 132 2021 JRNL REFN ESSN 2399-3642 JRNL PMID 33514861 JRNL DOI 10.1038/S42003-021-01671-8 REMARK 2 REMARK 2 RESOLUTION. 2.12 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0218 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.12 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 84.59 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 12063 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.600 REMARK 3 FREE R VALUE TEST SET COUNT : 989 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.12 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.17 REMARK 3 REFLECTION IN BIN (WORKING SET) : 887 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2360 REMARK 3 BIN FREE R VALUE SET COUNT : 68 REMARK 3 BIN FREE R VALUE : 0.3070 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1793 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 97 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.01000 REMARK 3 B22 (A**2) : 0.01000 REMARK 3 B33 (A**2) : -0.03000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.263 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.215 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.176 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.093 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.922 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1855 ; 0.012 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1743 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2525 ; 1.561 ; 1.966 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4049 ; 0.807 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 236 ; 6.918 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 75 ;33.009 ;24.400 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 302 ;16.957 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 5 ; 9.940 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 287 ; 0.089 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2054 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 363 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6HRG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-SEP-18. REMARK 100 THE DEPOSITION ID IS D_1200012076. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID30B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9677 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 4M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12063 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.120 REMARK 200 RESOLUTION RANGE LOW (A) : 84.590 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS PH 8 AND 22 % (W/V) PEG REMARK 280 8000, VAPOR DIFFUSION, TEMPERATURE 273K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 33.71000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 19.46248 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 84.59000 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 33.71000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 19.46248 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 84.59000 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 33.71000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 19.46248 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 84.59000 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 33.71000 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 19.46248 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 84.59000 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 33.71000 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 19.46248 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 84.59000 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 33.71000 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 19.46248 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 84.59000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 38.92496 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 169.18000 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 38.92496 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 169.18000 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 38.92496 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 169.18000 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 38.92496 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 169.18000 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 38.92496 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 169.18000 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 38.92496 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 169.18000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 470 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9910 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -80.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 O4 PO4 A 303 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 469 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 488 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 493 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 494 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 235 REMARK 465 ARG A 236 REMARK 465 GLN A 237 REMARK 465 LEU A 238 REMARK 465 GLY A 239 REMARK 465 PRO A 240 REMARK 465 GLU A 241 REMARK 465 GLN A 242 REMARK 465 LYS A 243 REMARK 465 LEU A 244 REMARK 465 ILE A 245 REMARK 465 SER A 246 REMARK 465 GLU A 247 REMARK 465 GLU A 248 REMARK 465 ASP A 249 REMARK 465 LEU A 250 REMARK 465 ASN A 251 REMARK 465 SER A 252 REMARK 465 ALA A 253 REMARK 465 VAL A 254 REMARK 465 ASP A 255 REMARK 465 HIS A 256 REMARK 465 HIS A 257 REMARK 465 HIS A 258 REMARK 465 HIS A 259 REMARK 465 HIS A 260 REMARK 465 HIS A 261 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 219 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 11 -112.12 51.06 REMARK 500 ASP A 26 61.38 38.38 REMARK 500 HIS A 118 -162.49 -168.08 REMARK 500 SER A 120 52.37 -160.20 REMARK 500 TYR A 121 -127.67 43.14 REMARK 500 LYS A 123 53.07 -106.61 REMARK 500 ALA A 159 64.81 29.36 REMARK 500 HIS A 170 -61.15 76.47 REMARK 500 ASN A 196 -10.67 64.42 REMARK 500 ALA A 218 169.75 171.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 54 NE2 REMARK 620 2 HIS A 56 ND1 98.7 REMARK 620 3 HIS A 118 NE2 106.0 100.4 REMARK 620 4 ASP A 144 OD2 93.0 166.4 82.8 REMARK 620 5 HOH A 405 O 116.4 101.7 127.9 66.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 58 OD2 REMARK 620 2 ASP A 144 OD2 163.6 REMARK 620 3 HIS A 194 NE2 98.0 96.9 REMARK 620 4 HOH A 405 O 86.7 77.4 140.5 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 303 DBREF 6HRG A 1 233 UNP A8ABX8 Y1254_IGNH4 1 233 SEQADV 6HRG LYS A 234 UNP A8ABX8 EXPRESSION TAG SEQADV 6HRG GLY A 235 UNP A8ABX8 EXPRESSION TAG SEQADV 6HRG ARG A 236 UNP A8ABX8 EXPRESSION TAG SEQADV 6HRG GLN A 237 UNP A8ABX8 EXPRESSION TAG SEQADV 6HRG LEU A 238 UNP A8ABX8 EXPRESSION TAG SEQADV 6HRG GLY A 239 UNP A8ABX8 EXPRESSION TAG SEQADV 6HRG PRO A 240 UNP A8ABX8 EXPRESSION TAG SEQADV 6HRG GLU A 241 UNP A8ABX8 EXPRESSION TAG SEQADV 6HRG GLN A 242 UNP A8ABX8 EXPRESSION TAG SEQADV 6HRG LYS A 243 UNP A8ABX8 EXPRESSION TAG SEQADV 6HRG LEU A 244 UNP A8ABX8 EXPRESSION TAG SEQADV 6HRG ILE A 245 UNP A8ABX8 EXPRESSION TAG SEQADV 6HRG SER A 246 UNP A8ABX8 EXPRESSION TAG SEQADV 6HRG GLU A 247 UNP A8ABX8 EXPRESSION TAG SEQADV 6HRG GLU A 248 UNP A8ABX8 EXPRESSION TAG SEQADV 6HRG ASP A 249 UNP A8ABX8 EXPRESSION TAG SEQADV 6HRG LEU A 250 UNP A8ABX8 EXPRESSION TAG SEQADV 6HRG ASN A 251 UNP A8ABX8 EXPRESSION TAG SEQADV 6HRG SER A 252 UNP A8ABX8 EXPRESSION TAG SEQADV 6HRG ALA A 253 UNP A8ABX8 EXPRESSION TAG SEQADV 6HRG VAL A 254 UNP A8ABX8 EXPRESSION TAG SEQADV 6HRG ASP A 255 UNP A8ABX8 EXPRESSION TAG SEQADV 6HRG HIS A 256 UNP A8ABX8 EXPRESSION TAG SEQADV 6HRG HIS A 257 UNP A8ABX8 EXPRESSION TAG SEQADV 6HRG HIS A 258 UNP A8ABX8 EXPRESSION TAG SEQADV 6HRG HIS A 259 UNP A8ABX8 EXPRESSION TAG SEQADV 6HRG HIS A 260 UNP A8ABX8 EXPRESSION TAG SEQADV 6HRG HIS A 261 UNP A8ABX8 EXPRESSION TAG SEQRES 1 A 261 MET THR THR VAL LYS LEU THR TYR PHE GLY HIS SER ALA SEQRES 2 A 261 PHE HIS VAL GLU VAL ASP GLY VAL GLY ILE ALA ILE ASP SEQRES 3 A 261 PRO TRP ILE THR ASN PRO LEU SER LYS THR THR LEU GLU SEQRES 4 A 261 ASP TYR LEU LYS ASN PHE LYS THR ASP LEU VAL VAL ILE SEQRES 5 A 261 THR HIS ALA HIS GLU ASP HIS ILE GLY ASP ALA LEU GLU SEQRES 6 A 261 ILE MET ARG ARG THR GLY ALA LYS PHE PHE SER ILE HIS SEQRES 7 A 261 GLU ILE TYR VAL ASP LEU THR GLN LYS GLY PHE GLN GLY SEQRES 8 A 261 ILE GLY ALA ASN ILE GLY GLY PRO ALA LYS LEU ASP ASP SEQRES 9 A 261 VAL ALA PRO GLY LEU GLY ILE ALA LEU THR PRO ALA THR SEQRES 10 A 261 HIS SER SER TYR ASP LYS GLY VAL PRO THR GLY ALA ILE SEQRES 11 A 261 ILE PHE LYS ASP GLY LYS ALA LEU VAL TYR HIS ALA GLY SEQRES 12 A 261 ASP THR GLY LEU PHE ALA GLU MET GLN PHE ILE GLY GLU SEQRES 13 A 261 LEU TYR ALA PRO LYS VAL ALA LEU LEU PRO ILE GLY GLY SEQRES 14 A 261 HIS TYR THR MET ASP ILE GLU GLN ALA LEU LEU ALA THR SEQRES 15 A 261 LYS LEU LEU ARG PRO GLU VAL VAL VAL PRO MET HIS TYR SEQRES 16 A 261 ASN THR PHE PRO PRO ILE ARG ALA ASP PRO ASN GLU PHE SEQRES 17 A 261 LYS GLN LYS VAL GLU SER ALA GLY LEU ALA LYS VAL ARG SEQRES 18 A 261 VAL MET GLU PRO GLY GLU THR VAL THR PHE GLU PHE LYS SEQRES 19 A 261 GLY ARG GLN LEU GLY PRO GLU GLN LYS LEU ILE SER GLU SEQRES 20 A 261 GLU ASP LEU ASN SER ALA VAL ASP HIS HIS HIS HIS HIS SEQRES 21 A 261 HIS HET ZN A 301 1 HET ZN A 302 1 HET PO4 A 303 5 HET K A 304 1 HETNAM ZN ZINC ION HETNAM PO4 PHOSPHATE ION HETNAM K POTASSIUM ION FORMUL 2 ZN 2(ZN 2+) FORMUL 4 PO4 O4 P 3- FORMUL 5 K K 1+ FORMUL 6 HOH *97(H2 O) HELIX 1 AA1 THR A 37 PHE A 45 1 9 HELIX 2 AA2 HIS A 56 GLY A 61 1 6 HELIX 3 AA3 ASP A 62 GLY A 71 1 10 HELIX 4 AA4 HIS A 78 LYS A 87 1 10 HELIX 5 AA5 GLU A 150 ALA A 159 1 10 HELIX 6 AA6 ASP A 174 ARG A 186 1 13 HELIX 7 AA7 PHE A 198 ARG A 202 5 5 HELIX 8 AA8 ASP A 204 ALA A 215 1 12 SHEET 1 AA1 7 GLY A 91 ALA A 94 0 SHEET 2 AA1 7 LYS A 73 ILE A 77 1 N PHE A 74 O ILE A 92 SHEET 3 AA1 7 LEU A 49 VAL A 51 1 N VAL A 50 O PHE A 75 SHEET 4 AA1 7 GLY A 22 ILE A 25 1 N ALA A 24 O VAL A 51 SHEET 5 AA1 7 PHE A 14 VAL A 18 -1 N VAL A 16 O ILE A 23 SHEET 6 AA1 7 THR A 3 TYR A 8 -1 N THR A 7 O HIS A 15 SHEET 7 AA1 7 THR A 228 GLU A 232 -1 O VAL A 229 N LEU A 6 SHEET 1 AA2 7 ALA A 100 LYS A 101 0 SHEET 2 AA2 7 LEU A 109 THR A 114 -1 O ILE A 111 N ALA A 100 SHEET 3 AA2 7 GLY A 128 LYS A 133 -1 O PHE A 132 N GLY A 110 SHEET 4 AA2 7 LYS A 136 HIS A 141 -1 O HIS A 141 N ALA A 129 SHEET 5 AA2 7 VAL A 162 PRO A 166 1 O LEU A 164 N TYR A 140 SHEET 6 AA2 7 VAL A 189 MET A 193 1 O VAL A 189 N ALA A 163 SHEET 7 AA2 7 LYS A 219 VAL A 220 1 O LYS A 219 N VAL A 190 LINK NE2 HIS A 54 ZN ZN A 302 1555 1555 2.22 LINK ND1 HIS A 56 ZN ZN A 302 1555 1555 2.12 LINK OD2 ASP A 58 ZN ZN A 301 1555 1555 2.22 LINK NE2 HIS A 118 ZN ZN A 302 1555 1555 2.21 LINK OD2 ASP A 144 ZN ZN A 301 1555 1555 2.06 LINK OD2 ASP A 144 ZN ZN A 302 1555 1555 2.48 LINK NE2 HIS A 194 ZN ZN A 301 1555 1555 2.15 LINK ZN ZN A 301 O HOH A 405 1555 1555 1.93 LINK ZN ZN A 302 O HOH A 405 1555 1555 2.00 LINK K K A 304 O HOH A 496 1555 1555 3.19 SITE 1 AC1 6 ASP A 58 HIS A 59 ASP A 144 HIS A 194 SITE 2 AC1 6 ZN A 302 HOH A 405 SITE 1 AC2 6 HIS A 54 HIS A 56 HIS A 118 ASP A 144 SITE 2 AC2 6 ZN A 301 HOH A 405 SITE 1 AC3 2 GLU A 150 HOH A 458 CRYST1 67.420 67.420 253.770 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014832 0.008563 0.000000 0.00000 SCALE2 0.000000 0.017127 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003941 0.00000