HEADER TRANSFERASE 09-OCT-18 6HUW TITLE CRYSTAL STRUCTURE OF CDAA FROM BACILLUS SUBTILIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIADENYLATE CYCLASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: DAC,CYCLIC-DI-AMP SYNTHASE,C-DI-AMP SYNTHASE; COMPND 5 EC: 2.7.7.85; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 1423; SOURCE 4 GENE: DACA, AX282_00750, B4417_1452, BS21228_13325, C7T97_16060, SOURCE 5 DJ572_00670, DLD52_20680, SC09_CONTIG25ORF01072; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS C-DI-AMP, DI-ADENYLATE CYCLASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR T.TOSI,P.S.FREEMONT,A.GRUNDLING REVDAT 2 24-JAN-24 6HUW 1 REMARK REVDAT 1 30-OCT-19 6HUW 0 JRNL AUTH T.TOSI,F.HOSHIGA JRNL TITL CDAA/GLMM COMPLEX IN BACILLUS SUBTILIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1_2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 59.62 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 9901 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.257 REMARK 3 R VALUE (WORKING SET) : 0.255 REMARK 3 FREE R VALUE : 0.297 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.490 REMARK 3 FREE R VALUE TEST SET COUNT : 445 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 59.6299 - 4.0381 1.00 3293 157 0.2183 0.2551 REMARK 3 2 4.0381 - 3.2052 1.00 3112 139 0.2927 0.3330 REMARK 3 3 3.2052 - 2.8000 1.00 3051 149 0.3165 0.3935 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.490 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.550 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 65.08 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 69.24 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2230 REMARK 3 ANGLE : 1.192 3014 REMARK 3 CHIRALITY : 0.062 366 REMARK 3 PLANARITY : 0.007 389 REMARK 3 DIHEDRAL : 8.318 1384 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 107 THROUGH 126 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.9745 13.3091 24.4143 REMARK 3 T TENSOR REMARK 3 T11: 1.1860 T22: 0.5264 REMARK 3 T33: 0.5889 T12: -0.1433 REMARK 3 T13: -0.2190 T23: -0.0366 REMARK 3 L TENSOR REMARK 3 L11: 3.3986 L22: 5.2880 REMARK 3 L33: 3.5031 L12: 0.2174 REMARK 3 L13: 0.4576 L23: -2.8693 REMARK 3 S TENSOR REMARK 3 S11: 0.6336 S12: -0.2685 S13: -0.3706 REMARK 3 S21: 1.0812 S22: -0.4766 S23: -0.9257 REMARK 3 S31: 0.6584 S32: 0.2083 S33: -0.4133 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 127 THROUGH 155 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.6688 13.3358 15.7630 REMARK 3 T TENSOR REMARK 3 T11: 0.5878 T22: 0.3518 REMARK 3 T33: 0.4297 T12: -0.0600 REMARK 3 T13: -0.0381 T23: -0.1015 REMARK 3 L TENSOR REMARK 3 L11: 1.5073 L22: 2.8059 REMARK 3 L33: 2.9992 L12: 0.2732 REMARK 3 L13: -0.2538 L23: 0.5502 REMARK 3 S TENSOR REMARK 3 S11: -0.0709 S12: -0.1419 S13: 0.3078 REMARK 3 S21: -0.1907 S22: -0.1040 S23: 0.1178 REMARK 3 S31: 0.3699 S32: -0.4163 S33: 0.2756 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 156 THROUGH 183 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.7236 9.0359 14.4923 REMARK 3 T TENSOR REMARK 3 T11: 0.6626 T22: 0.2780 REMARK 3 T33: 0.4240 T12: -0.0400 REMARK 3 T13: 0.0181 T23: -0.0643 REMARK 3 L TENSOR REMARK 3 L11: 6.4617 L22: 5.2482 REMARK 3 L33: 3.1995 L12: -1.4677 REMARK 3 L13: 1.8889 L23: -1.5256 REMARK 3 S TENSOR REMARK 3 S11: 0.2660 S12: 0.1336 S13: -0.1430 REMARK 3 S21: 0.3345 S22: -0.5211 S23: -0.4766 REMARK 3 S31: 0.5486 S32: 0.3745 S33: 0.4679 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 184 THROUGH 202 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.5536 25.8979 5.8970 REMARK 3 T TENSOR REMARK 3 T11: 1.1939 T22: 0.1383 REMARK 3 T33: 0.9514 T12: -0.2217 REMARK 3 T13: -0.2860 T23: -0.0466 REMARK 3 L TENSOR REMARK 3 L11: 0.1016 L22: 0.2567 REMARK 3 L33: 0.3277 L12: -0.1453 REMARK 3 L13: -0.1487 L23: 0.1365 REMARK 3 S TENSOR REMARK 3 S11: -0.5134 S12: 0.5334 S13: 0.5177 REMARK 3 S21: -2.0472 S22: 0.2444 S23: -0.3221 REMARK 3 S31: -0.1839 S32: 0.0974 S33: 0.1416 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 203 THROUGH 241 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.2380 25.2595 14.1944 REMARK 3 T TENSOR REMARK 3 T11: 0.9123 T22: 0.2569 REMARK 3 T33: 0.5765 T12: -0.0105 REMARK 3 T13: -0.1396 T23: -0.0753 REMARK 3 L TENSOR REMARK 3 L11: 3.3232 L22: 2.8632 REMARK 3 L33: 1.7114 L12: 0.4414 REMARK 3 L13: -0.0455 L23: -0.1808 REMARK 3 S TENSOR REMARK 3 S11: 0.0385 S12: 0.3593 S13: 0.2295 REMARK 3 S21: -0.5488 S22: -0.1167 S23: 0.1639 REMARK 3 S31: -0.2499 S32: -0.1906 S33: 0.1362 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 242 THROUGH 252 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.4813 23.1811 27.8704 REMARK 3 T TENSOR REMARK 3 T11: 1.2607 T22: 0.8065 REMARK 3 T33: 0.5192 T12: 0.0709 REMARK 3 T13: -0.4013 T23: -0.3156 REMARK 3 L TENSOR REMARK 3 L11: 3.7692 L22: 5.3641 REMARK 3 L33: 5.0956 L12: 1.7653 REMARK 3 L13: -3.5704 L23: -4.4597 REMARK 3 S TENSOR REMARK 3 S11: -0.3225 S12: -1.1694 S13: 0.6766 REMARK 3 S21: 0.0345 S22: -0.7786 S23: 0.1555 REMARK 3 S31: -0.9778 S32: 0.5317 S33: -1.0235 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 107 THROUGH 145 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.3442 -10.5795 11.6409 REMARK 3 T TENSOR REMARK 3 T11: 0.8335 T22: 0.2213 REMARK 3 T33: 0.4537 T12: -0.0910 REMARK 3 T13: 0.0319 T23: 0.0117 REMARK 3 L TENSOR REMARK 3 L11: 4.9272 L22: 2.4202 REMARK 3 L33: 2.1923 L12: -1.9306 REMARK 3 L13: 0.8482 L23: -0.1644 REMARK 3 S TENSOR REMARK 3 S11: 0.3024 S12: 0.4498 S13: -0.3913 REMARK 3 S21: 0.3995 S22: -0.0635 S23: 0.0203 REMARK 3 S31: 0.1122 S32: -0.1885 S33: -0.0334 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 146 THROUGH 162 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.3051 -1.5864 15.3515 REMARK 3 T TENSOR REMARK 3 T11: 0.8020 T22: 0.1805 REMARK 3 T33: 0.4528 T12: -0.1248 REMARK 3 T13: -0.0643 T23: -0.0463 REMARK 3 L TENSOR REMARK 3 L11: 7.4418 L22: 3.5341 REMARK 3 L33: 0.9589 L12: -0.9663 REMARK 3 L13: -0.6948 L23: 1.8426 REMARK 3 S TENSOR REMARK 3 S11: 0.2199 S12: 0.1446 S13: 0.4371 REMARK 3 S21: 0.6984 S22: -0.2074 S23: 0.0576 REMARK 3 S31: 0.0520 S32: -0.3430 S33: 0.3778 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 163 THROUGH 183 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.1170 -4.6679 16.2664 REMARK 3 T TENSOR REMARK 3 T11: 0.8748 T22: 0.3507 REMARK 3 T33: 0.4963 T12: -0.0216 REMARK 3 T13: -0.1436 T23: 0.0717 REMARK 3 L TENSOR REMARK 3 L11: 0.4843 L22: 2.8296 REMARK 3 L33: 6.3181 L12: -0.8057 REMARK 3 L13: -0.2035 L23: -0.9308 REMARK 3 S TENSOR REMARK 3 S11: 0.6522 S12: -0.8010 S13: 0.1806 REMARK 3 S21: 0.7170 S22: -0.5608 S23: 0.0485 REMARK 3 S31: -0.2387 S32: 0.9135 S33: 0.0484 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 184 THROUGH 201 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.6819 -17.7517 18.0075 REMARK 3 T TENSOR REMARK 3 T11: 0.7156 T22: 1.0150 REMARK 3 T33: 0.9039 T12: -0.0347 REMARK 3 T13: -0.3156 T23: -0.1349 REMARK 3 L TENSOR REMARK 3 L11: 3.4718 L22: 7.7876 REMARK 3 L33: 0.3485 L12: -1.7037 REMARK 3 L13: -0.6506 L23: -0.9469 REMARK 3 S TENSOR REMARK 3 S11: -0.5896 S12: 0.9418 S13: -0.2665 REMARK 3 S21: 1.5293 S22: 0.5742 S23: -1.7533 REMARK 3 S31: -0.7385 S32: 1.3512 S33: -0.1275 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 202 THROUGH 237 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.4088 -18.5356 12.5988 REMARK 3 T TENSOR REMARK 3 T11: 0.9193 T22: 0.4108 REMARK 3 T33: 0.7941 T12: 0.0516 REMARK 3 T13: -0.1956 T23: 0.0095 REMARK 3 L TENSOR REMARK 3 L11: 4.7204 L22: 2.6768 REMARK 3 L33: 3.6048 L12: 0.3418 REMARK 3 L13: 0.5497 L23: -0.5444 REMARK 3 S TENSOR REMARK 3 S11: 0.1839 S12: -0.4728 S13: -1.5244 REMARK 3 S21: 0.8972 S22: -0.3720 S23: -1.8103 REMARK 3 S31: 0.2977 S32: 0.1403 S33: -0.2029 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 238 THROUGH 252 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.2167 -18.9061 3.5638 REMARK 3 T TENSOR REMARK 3 T11: 0.9111 T22: 0.4517 REMARK 3 T33: 0.4475 T12: -0.0206 REMARK 3 T13: 0.1151 T23: 0.0401 REMARK 3 L TENSOR REMARK 3 L11: 6.0277 L22: 3.8904 REMARK 3 L33: 4.4878 L12: -4.2380 REMARK 3 L13: -0.3264 L23: -0.6958 REMARK 3 S TENSOR REMARK 3 S11: -0.7432 S12: 0.5175 S13: -1.5772 REMARK 3 S21: -0.4075 S22: 0.2110 S23: 0.6595 REMARK 3 S31: 0.4804 S32: 0.6250 S33: -0.4310 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6HUW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 09-OCT-18. REMARK 100 THE DEPOSITION ID IS D_1200012358. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-SEP-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9974 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 93.660 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 23.20 REMARK 200 R MERGE (I) : 0.18600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 18.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 24.10 REMARK 200 R MERGE FOR SHELL (I) : 1.82500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 5.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4RV7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM CACODYLATE PH 6.5, 0.1M REMARK 280 AMMONIUM SULFATE, 0.3M SODIUM FORMATE, 6% PEG8000, 3% PGA, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 93.66200 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 31.44300 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 31.44300 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 140.49300 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 31.44300 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 31.44300 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 46.83100 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 31.44300 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 31.44300 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 140.49300 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 31.44300 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 31.44300 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 46.83100 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 93.66200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14160 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 91 REMARK 465 SER A 92 REMARK 465 HIS A 93 REMARK 465 MET A 94 REMARK 465 ALA A 95 REMARK 465 SER A 96 REMARK 465 PHE A 97 REMARK 465 PHE A 98 REMARK 465 SER A 99 REMARK 465 ARG A 100 REMARK 465 SER A 101 REMARK 465 GLY A 102 REMARK 465 THR A 103 REMARK 465 PRO A 104 REMARK 465 VAL A 105 REMARK 465 GLU A 106 REMARK 465 PHE A 253 REMARK 465 LYS A 254 REMARK 465 LYS A 255 REMARK 465 ASN A 256 REMARK 465 THR A 257 REMARK 465 ARG A 258 REMARK 465 ASP A 259 REMARK 465 THR A 260 REMARK 465 SER A 261 REMARK 465 SER A 262 REMARK 465 ASN A 263 REMARK 465 ARG A 264 REMARK 465 TRP A 265 REMARK 465 TYR A 266 REMARK 465 TRP A 267 REMARK 465 ARG A 268 REMARK 465 GLY A 269 REMARK 465 LYS A 270 REMARK 465 LYS A 271 REMARK 465 ASN A 272 REMARK 465 GLY A 273 REMARK 465 GLY B 91 REMARK 465 SER B 92 REMARK 465 HIS B 93 REMARK 465 MET B 94 REMARK 465 ALA B 95 REMARK 465 SER B 96 REMARK 465 PHE B 97 REMARK 465 PHE B 98 REMARK 465 SER B 99 REMARK 465 ARG B 100 REMARK 465 SER B 101 REMARK 465 GLY B 102 REMARK 465 THR B 103 REMARK 465 PRO B 104 REMARK 465 VAL B 105 REMARK 465 GLU B 106 REMARK 465 PHE B 195 REMARK 465 ILE B 196 REMARK 465 SER B 197 REMARK 465 LYS B 254 REMARK 465 LYS B 255 REMARK 465 ASN B 256 REMARK 465 THR B 257 REMARK 465 ARG B 258 REMARK 465 ASP B 259 REMARK 465 THR B 260 REMARK 465 SER B 261 REMARK 465 SER B 262 REMARK 465 ASN B 263 REMARK 465 ARG B 264 REMARK 465 TRP B 265 REMARK 465 TYR B 266 REMARK 465 TRP B 267 REMARK 465 ARG B 268 REMARK 465 GLY B 269 REMARK 465 LYS B 270 REMARK 465 LYS B 271 REMARK 465 ASN B 272 REMARK 465 GLY B 273 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 107 CG CD OE1 OE2 REMARK 480 GLN A 109 CG CD OE1 NE2 REMARK 480 GLN A 110 CG CD OE1 NE2 REMARK 480 LYS A 111 CB CG CD CE NZ REMARK 480 GLU A 114 CG CD OE1 OE2 REMARK 480 LYS A 118 CD CE NZ REMARK 480 TYR A 122 CB CG CD1 CD2 CE1 CE2 CZ REMARK 480 TYR A 122 OH REMARK 480 ARG A 127 CB CG CD NE CZ NH1 NH2 REMARK 480 ARG A 136 CG CD NE CZ NH1 NH2 REMARK 480 ASP A 142 CG OD1 OD2 REMARK 480 GLU A 145 CB CG CD OE1 OE2 REMARK 480 LYS A 153 CD CE NZ REMARK 480 LYS A 177 CG CD CE NZ REMARK 480 ASN A 179 CB CG OD1 ND2 REMARK 480 GLU A 192 CB CG CD OE1 OE2 REMARK 480 LYS A 198 CB CG CD CE NZ REMARK 480 GLU A 199 CG CD OE1 OE2 REMARK 480 ARG A 205 CD NE CZ NH1 NH2 REMARK 480 ASP A 215 CB CG OD1 OD2 REMARK 480 GLU A 223 CB CG CD OE1 OE2 REMARK 480 GLU A 224 CG CD OE1 OE2 REMARK 480 LYS A 232 CG CD CE NZ REMARK 480 ASP A 235 CB CG OD1 OD2 REMARK 480 ARG A 238 CB CG CD NE CZ NH1 NH2 REMARK 480 GLU A 239 CB CG CD OE1 OE2 REMARK 480 GLU A 242 CB CG CD OE1 OE2 REMARK 480 GLU A 243 CB CG CD OE1 OE2 REMARK 480 GLU A 250 CB CG CD OE1 OE2 REMARK 480 GLU A 252 CB CG CD OE1 OE2 REMARK 480 GLN B 109 CB CG CD OE1 NE2 REMARK 480 GLN B 110 CG CD OE1 NE2 REMARK 480 LYS B 111 CB CG CD CE NZ REMARK 480 GLU B 114 CB CG CD OE1 OE2 REMARK 480 ASN B 121 CG OD1 ND2 REMARK 480 ARG B 127 CG CD NE CZ NH1 NH2 REMARK 480 GLU B 135 CG CD OE1 OE2 REMARK 480 GLU B 145 CG CD OE1 OE2 REMARK 480 ASN B 166 CB CG OD1 ND2 REMARK 480 LYS B 177 CB CG CD CE NZ REMARK 480 ASN B 178 CB CG OD1 ND2 REMARK 480 TYR B 187 CB CG CD1 CD2 CE1 CE2 CZ REMARK 480 TYR B 187 OH REMARK 480 GLU B 192 CB CG CD OE1 OE2 REMARK 480 LYS B 198 CB CG CD CE NZ REMARK 480 GLU B 199 CB CG CD OE1 OE2 REMARK 480 LEU B 200 CB CG CD1 CD2 REMARK 480 ARG B 205 CD NE CZ NH1 NH2 REMARK 480 GLU B 223 CB CG CD OE1 OE2 REMARK 480 GLU B 224 CG CD OE1 OE2 REMARK 480 GLU B 239 CB CG CD OE1 OE2 REMARK 480 GLU B 242 CG CD OE1 OE2 REMARK 480 GLU B 243 CG CD OE1 OE2 REMARK 480 GLU B 247 CB CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASN A 161 OG1 THR B 167 1.50 REMARK 500 OG SER A 191 OE2 GLU A 212 1.79 REMARK 500 O TYR B 143 CG2 THR B 146 1.90 REMARK 500 OG1 THR A 167 OD1 ASN B 161 2.00 REMARK 500 CG ARG A 127 O GLU A 223 2.06 REMARK 500 NH1 ARG A 203 OE2 GLU A 223 2.08 REMARK 500 O LYS A 118 CD2 TYR A 122 2.12 REMARK 500 ND2 ASN A 161 O ASN B 161 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PRO A 165 CD PRO A 165 N -0.243 REMARK 500 CYS A 186 CA CYS A 186 CB -0.090 REMARK 500 CYS A 186 CB CYS A 186 SG -0.115 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ILE A 113 N - CA - C ANGL. DEV. = -19.8 DEGREES REMARK 500 ARG A 126 NE - CZ - NH1 ANGL. DEV. = -4.8 DEGREES REMARK 500 ARG A 126 NE - CZ - NH2 ANGL. DEV. = 4.3 DEGREES REMARK 500 LEU A 200 CA - CB - CG ANGL. DEV. = 16.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 112 -4.02 83.10 REMARK 500 ARG A 136 -110.39 -131.40 REMARK 500 ASN A 151 51.35 34.29 REMARK 500 ASN A 178 -128.89 55.48 REMARK 500 ALA A 185 38.76 74.61 REMARK 500 GLU A 192 57.07 -93.93 REMARK 500 LYS A 198 -163.01 -77.69 REMARK 500 THR A 202 -93.24 72.45 REMARK 500 SER A 216 172.11 -57.03 REMARK 500 GLU A 239 73.91 53.87 REMARK 500 THR B 112 -46.51 137.42 REMARK 500 ASP B 137 -34.10 -130.64 REMARK 500 ASN B 151 49.28 38.30 REMARK 500 ILE B 181 93.93 -68.08 REMARK 500 REMARK 500 REMARK: NULL DBREF1 6HUW A 97 273 UNP A0A063XB03_BACIU DBREF2 6HUW A A0A063XB03 97 273 DBREF1 6HUW B 97 273 UNP A0A063XB03_BACIU DBREF2 6HUW B A0A063XB03 97 273 SEQADV 6HUW GLY A 91 UNP A0A063XB0 EXPRESSION TAG SEQADV 6HUW SER A 92 UNP A0A063XB0 EXPRESSION TAG SEQADV 6HUW HIS A 93 UNP A0A063XB0 EXPRESSION TAG SEQADV 6HUW MET A 94 UNP A0A063XB0 EXPRESSION TAG SEQADV 6HUW ALA A 95 UNP A0A063XB0 EXPRESSION TAG SEQADV 6HUW SER A 96 UNP A0A063XB0 EXPRESSION TAG SEQADV 6HUW GLY B 91 UNP A0A063XB0 EXPRESSION TAG SEQADV 6HUW SER B 92 UNP A0A063XB0 EXPRESSION TAG SEQADV 6HUW HIS B 93 UNP A0A063XB0 EXPRESSION TAG SEQADV 6HUW MET B 94 UNP A0A063XB0 EXPRESSION TAG SEQADV 6HUW ALA B 95 UNP A0A063XB0 EXPRESSION TAG SEQADV 6HUW SER B 96 UNP A0A063XB0 EXPRESSION TAG SEQRES 1 A 183 GLY SER HIS MET ALA SER PHE PHE SER ARG SER GLY THR SEQRES 2 A 183 PRO VAL GLU GLU ALA GLN GLN LYS THR ILE GLU ALA ILE SEQRES 3 A 183 THR LYS ALA ILE ASN TYR MET ALA LYS ARG ARG ILE GLY SEQRES 4 A 183 ALA LEU LEU THR ILE GLU ARG ASP THR GLY MET GLY ASP SEQRES 5 A 183 TYR ILE GLU THR GLY ILE PRO LEU ASN ALA LYS VAL SER SEQRES 6 A 183 SER GLU LEU LEU ILE ASN ILE PHE ILE PRO ASN THR PRO SEQRES 7 A 183 LEU HIS ASP GLY ALA VAL ILE MET LYS ASN ASN GLU ILE SEQRES 8 A 183 ALA ALA ALA ALA CYS TYR LEU PRO LEU SER GLU SER PRO SEQRES 9 A 183 PHE ILE SER LYS GLU LEU GLY THR ARG HIS ARG ALA ALA SEQRES 10 A 183 VAL GLY ILE SER GLU VAL THR ASP SER LEU THR ILE ILE SEQRES 11 A 183 VAL SER GLU GLU THR GLY GLY VAL SER VAL ALA LYS ASN SEQRES 12 A 183 GLY ASP LEU HIS ARG GLU LEU THR GLU GLU ALA LEU LYS SEQRES 13 A 183 GLU MET LEU GLU ALA GLU PHE LYS LYS ASN THR ARG ASP SEQRES 14 A 183 THR SER SER ASN ARG TRP TYR TRP ARG GLY LYS LYS ASN SEQRES 15 A 183 GLY SEQRES 1 B 183 GLY SER HIS MET ALA SER PHE PHE SER ARG SER GLY THR SEQRES 2 B 183 PRO VAL GLU GLU ALA GLN GLN LYS THR ILE GLU ALA ILE SEQRES 3 B 183 THR LYS ALA ILE ASN TYR MET ALA LYS ARG ARG ILE GLY SEQRES 4 B 183 ALA LEU LEU THR ILE GLU ARG ASP THR GLY MET GLY ASP SEQRES 5 B 183 TYR ILE GLU THR GLY ILE PRO LEU ASN ALA LYS VAL SER SEQRES 6 B 183 SER GLU LEU LEU ILE ASN ILE PHE ILE PRO ASN THR PRO SEQRES 7 B 183 LEU HIS ASP GLY ALA VAL ILE MET LYS ASN ASN GLU ILE SEQRES 8 B 183 ALA ALA ALA ALA CYS TYR LEU PRO LEU SER GLU SER PRO SEQRES 9 B 183 PHE ILE SER LYS GLU LEU GLY THR ARG HIS ARG ALA ALA SEQRES 10 B 183 VAL GLY ILE SER GLU VAL THR ASP SER LEU THR ILE ILE SEQRES 11 B 183 VAL SER GLU GLU THR GLY GLY VAL SER VAL ALA LYS ASN SEQRES 12 B 183 GLY ASP LEU HIS ARG GLU LEU THR GLU GLU ALA LEU LYS SEQRES 13 B 183 GLU MET LEU GLU ALA GLU PHE LYS LYS ASN THR ARG ASP SEQRES 14 B 183 THR SER SER ASN ARG TRP TYR TRP ARG GLY LYS LYS ASN SEQRES 15 B 183 GLY HELIX 1 AA1 ILE A 113 ARG A 127 1 15 HELIX 2 AA2 MET A 140 GLU A 145 1 6 HELIX 3 AA3 SER A 155 PHE A 163 1 9 HELIX 4 AA4 THR A 202 THR A 214 1 13 HELIX 5 AA5 THR A 241 GLU A 252 1 12 HELIX 6 AA6 GLN B 109 ARG B 126 1 18 HELIX 7 AA7 MET B 140 GLU B 145 1 6 HELIX 8 AA8 SER B 155 PHE B 163 1 9 HELIX 9 AA9 GLY B 201 THR B 214 1 14 HELIX 10 AB1 THR B 241 GLU B 250 1 10 SHEET 1 AA1 7 ILE A 148 LYS A 153 0 SHEET 2 AA1 7 GLU A 180 CYS A 186 -1 O ALA A 184 N ILE A 148 SHEET 3 AA1 7 ALA A 173 LYS A 177 -1 N LYS A 177 O GLU A 180 SHEET 4 AA1 7 ALA A 130 ILE A 134 1 N THR A 133 O MET A 176 SHEET 5 AA1 7 LEU A 217 VAL A 221 -1 O LEU A 217 N ILE A 134 SHEET 6 AA1 7 VAL A 228 LYS A 232 -1 O SER A 229 N ILE A 220 SHEET 7 AA1 7 ASP A 235 HIS A 237 -1 O ASP A 235 N LYS A 232 SHEET 1 AA2 7 ILE B 148 LYS B 153 0 SHEET 2 AA2 7 GLU B 180 CYS B 186 -1 O ALA B 184 N ILE B 148 SHEET 3 AA2 7 ALA B 173 MET B 176 -1 N ALA B 173 O CYS B 186 SHEET 4 AA2 7 ALA B 130 ILE B 134 1 N LEU B 131 O VAL B 174 SHEET 5 AA2 7 LEU B 217 VAL B 221 -1 O ILE B 219 N LEU B 132 SHEET 6 AA2 7 VAL B 228 LYS B 232 -1 O ALA B 231 N THR B 218 SHEET 7 AA2 7 ASP B 235 LEU B 240 -1 O ASP B 235 N LYS B 232 CRYST1 62.886 62.886 187.324 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015902 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015902 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005338 0.00000