HEADER LYASE 17-OCT-18 6HXP
TITLE STRUCTURE OF CITRYL-COA LYASE FROM HYDROGENOBACTER THERMOPHILUS
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: CITRYL-COA LYASE;
COMPND 3 CHAIN: A;
COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HYDROGENOBACTER THERMOPHILUS;
SOURCE 3 ORGANISM_TAXID: 940;
SOURCE 4 GENE: CCL;
SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);
SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008;
SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET11A
KEYWDS ATP CITRATE LYASE, CENTRAL METABOLISM, ACETYL-COA, CITRATE SHUTTLE,
KEYWDS 2 RTCA CYCLE, CITRYL-COA, LIPOGENESIS, LYASE
EXPDTA X-RAY DIFFRACTION
AUTHOR K.VERSTRAETE,K.VERSCHUEREN
REVDAT 4 01-MAY-24 6HXP 1 REMARK
REVDAT 3 08-MAY-19 6HXP 1 JRNL
REVDAT 2 17-APR-19 6HXP 1 JRNL
REVDAT 1 10-APR-19 6HXP 0
JRNL AUTH K.H.G.VERSCHUEREN,C.BLANCHET,J.FELIX,A.DANSERCOER,D.DE VOS,
JRNL AUTH 2 Y.BLOCH,J.VAN BEEUMEN,D.SVERGUN,I.GUTSCHE,S.N.SAVVIDES,
JRNL AUTH 3 K.VERSTRAETE
JRNL TITL STRUCTURE OF ATP CITRATE LYASE AND THE ORIGIN OF CITRATE
JRNL TITL 2 SYNTHASE IN THE KREBS CYCLE.
JRNL REF NATURE V. 568 571 2019
JRNL REFN ESSN 1476-4687
JRNL PMID 30944476
JRNL DOI 10.1038/S41586-019-1095-5
REMARK 2
REMARK 2 RESOLUTION. 1.45 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : BUSTER 2.10.2
REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER,
REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN,
REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.45
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.94
REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000
REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9
REMARK 3 NUMBER OF REFLECTIONS : 63952
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.146
REMARK 3 R VALUE (WORKING SET) : 0.145
REMARK 3 FREE R VALUE : 0.162
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.910
REMARK 3 FREE R VALUE TEST SET COUNT : 3140
REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.000
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 20
REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.45
REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.49
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.62
REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 4589
REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2300
REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4341
REMARK 3 BIN R VALUE (WORKING SET) : 0.2290
REMARK 3 BIN FREE R VALUE : 0.2440
REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.40
REMARK 3 BIN FREE R VALUE TEST SET COUNT : 248
REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 2006
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 58
REMARK 3 SOLVENT ATOMS : 211
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 23.77
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.91
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : 3.98710
REMARK 3 B22 (A**2) : 3.98710
REMARK 3 B33 (A**2) : -7.97430
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.160
REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.046
REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.047
REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.048
REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.045
REMARK 3
REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797
REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.965
REMARK 3
REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15
REMARK 3 TERM COUNT WEIGHT FUNCTION.
REMARK 3 BOND LENGTHS : 4287 ; 2.000 ; HARMONIC
REMARK 3 BOND ANGLES : 7836 ; 2.000 ; HARMONIC
REMARK 3 TORSION ANGLES : 1011 ; 2.000 ; SINUSOIDAL
REMARK 3 TRIGONAL CARBON PLANES : 47 ; 2.000 ; HARMONIC
REMARK 3 GENERAL PLANES : 649 ; 5.000 ; HARMONIC
REMARK 3 ISOTROPIC THERMAL FACTORS : 4287 ; 20.000 ; HARMONIC
REMARK 3 BAD NON-BONDED CONTACTS : 0 ; 5.000 ; SEMIHARMONIC
REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL
REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL
REMARK 3 CHIRAL IMPROPER TORSION : 278 ; 5.000 ; SEMIHARMONIC
REMARK 3 SUM OF OCCUPANCIES : 12 ; 1.000 ; HARMONIC
REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL
REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL
REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL
REMARK 3 IDEAL-DIST CONTACT TERM : 4937 ; 4.000 ; SEMIHARMONIC
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES.
REMARK 3 BOND LENGTHS (A) : 0.010
REMARK 3 BOND ANGLES (DEGREES) : 1.03
REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.58
REMARK 3 OTHER TORSION ANGLES (DEGREES) : 13.70
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 9
REMARK 3
REMARK 3 TLS GROUP : 1
REMARK 3 SELECTION: { A|3 - A|47 }
REMARK 3 ORIGIN FOR THE GROUP (A): 4.8558 25.4554 -39.7952
REMARK 3 T TENSOR
REMARK 3 T11: -0.0223 T22: -0.0858
REMARK 3 T33: 0.0194 T12: 0.0056
REMARK 3 T13: 0.0219 T23: -0.0181
REMARK 3 L TENSOR
REMARK 3 L11: 1.6240 L22: 2.1017
REMARK 3 L33: 0.9347 L12: 0.1235
REMARK 3 L13: -0.3628 L23: -0.4816
REMARK 3 S TENSOR
REMARK 3 S11: -0.0084 S12: 0.0783 S13: 0.0984
REMARK 3 S21: 0.0837 S22: 0.0594 S23: 0.3214
REMARK 3 S31: -0.1528 S32: -0.0501 S33: -0.0509
REMARK 3
REMARK 3 TLS GROUP : 2
REMARK 3 SELECTION: { A|48 - A|61 }
REMARK 3 ORIGIN FOR THE GROUP (A): 20.7462 18.2502 -33.4161
REMARK 3 T TENSOR
REMARK 3 T11: 0.0145 T22: 0.0097
REMARK 3 T33: 0.0035 T12: -0.0184
REMARK 3 T13: -0.0107 T23: -0.0271
REMARK 3 L TENSOR
REMARK 3 L11: 1.6286 L22: 2.2338
REMARK 3 L33: 1.2300 L12: -1.2349
REMARK 3 L13: -0.8858 L23: 0.5315
REMARK 3 S TENSOR
REMARK 3 S11: 0.0116 S12: -0.1047 S13: 0.0445
REMARK 3 S21: 0.2935 S22: -0.0649 S23: -0.1269
REMARK 3 S31: -0.0795 S32: 0.0906 S33: 0.0533
REMARK 3
REMARK 3 TLS GROUP : 3
REMARK 3 SELECTION: { A|62 - A|100 }
REMARK 3 ORIGIN FOR THE GROUP (A): 10.4102 -1.4155 -42.5690
REMARK 3 T TENSOR
REMARK 3 T11: -0.0415 T22: -0.0254
REMARK 3 T33: 0.0172 T12: 0.0052
REMARK 3 T13: -0.0054 T23: -0.0134
REMARK 3 L TENSOR
REMARK 3 L11: 1.1662 L22: 1.1552
REMARK 3 L33: 0.8786 L12: 0.5431
REMARK 3 L13: -0.0259 L23: 0.0629
REMARK 3 S TENSOR
REMARK 3 S11: 0.0281 S12: 0.0122 S13: -0.1464
REMARK 3 S21: 0.0547 S22: 0.0180 S23: -0.1653
REMARK 3 S31: 0.0288 S32: 0.0659 S33: -0.0462
REMARK 3
REMARK 3 TLS GROUP : 4
REMARK 3 SELECTION: { A|101 - A|129 }
REMARK 3 ORIGIN FOR THE GROUP (A): 14.3304 8.4388 -12.6948
REMARK 3 T TENSOR
REMARK 3 T11: 0.1557 T22: 0.0143
REMARK 3 T33: -0.2015 T12: -0.0425
REMARK 3 T13: 0.0295 T23: -0.0033
REMARK 3 L TENSOR
REMARK 3 L11: 2.5041 L22: 1.2661
REMARK 3 L33: 3.0676 L12: -0.5486
REMARK 3 L13: 0.3297 L23: -0.6237
REMARK 3 S TENSOR
REMARK 3 S11: -0.0245 S12: -0.5436 S13: -0.0014
REMARK 3 S21: 0.5396 S22: 0.0095 S23: 0.3083
REMARK 3 S31: 0.0733 S32: -0.0528 S33: 0.0150
REMARK 3
REMARK 3 TLS GROUP : 5
REMARK 3 SELECTION: { A|130 - A|163 }
REMARK 3 ORIGIN FOR THE GROUP (A): 25.0475 7.6107 -23.1565
REMARK 3 T TENSOR
REMARK 3 T11: -0.0360 T22: -0.0701
REMARK 3 T33: -0.1216 T12: 0.0214
REMARK 3 T13: -0.0547 T23: 0.0352
REMARK 3 L TENSOR
REMARK 3 L11: 4.9854 L22: 2.4684
REMARK 3 L33: 3.6253 L12: 0.5583
REMARK 3 L13: -1.4960 L23: -0.4924
REMARK 3 S TENSOR
REMARK 3 S11: -0.1660 S12: -0.3949 S13: -0.4044
REMARK 3 S21: 0.3091 S22: -0.0110 S23: -0.3108
REMARK 3 S31: 0.4006 S32: 0.3168 S33: 0.1770
REMARK 3
REMARK 3 TLS GROUP : 6
REMARK 3 SELECTION: { A|164 - A|180 }
REMARK 3 ORIGIN FOR THE GROUP (A): 23.5820 7.9537 -12.5080
REMARK 3 T TENSOR
REMARK 3 T11: 0.1362 T22: 0.0583
REMARK 3 T33: -0.1701 T12: -0.0066
REMARK 3 T13: -0.0938 T23: 0.0165
REMARK 3 L TENSOR
REMARK 3 L11: 1.7224 L22: 0.1917
REMARK 3 L33: 2.3962 L12: -1.1639
REMARK 3 L13: 1.3309 L23: -2.5836
REMARK 3 S TENSOR
REMARK 3 S11: 0.0531 S12: -0.4980 S13: 0.0919
REMARK 3 S21: 0.2801 S22: -0.0804 S23: -0.0723
REMARK 3 S31: 0.0775 S32: 0.1915 S33: 0.0272
REMARK 3
REMARK 3 TLS GROUP : 7
REMARK 3 SELECTION: { A|181 - A|228 }
REMARK 3 ORIGIN FOR THE GROUP (A): 15.3434 7.2531 -32.5389
REMARK 3 T TENSOR
REMARK 3 T11: -0.0226 T22: -0.0510
REMARK 3 T33: -0.0190 T12: -0.0027
REMARK 3 T13: 0.0047 T23: -0.0099
REMARK 3 L TENSOR
REMARK 3 L11: 0.7889 L22: 1.3100
REMARK 3 L33: 0.6402 L12: 0.2304
REMARK 3 L13: 0.2209 L23: 0.3114
REMARK 3 S TENSOR
REMARK 3 S11: -0.0074 S12: -0.0392 S13: -0.0872
REMARK 3 S21: 0.2312 S22: -0.0264 S23: -0.0348
REMARK 3 S31: 0.0600 S32: 0.0681 S33: 0.0338
REMARK 3
REMARK 3 TLS GROUP : 8
REMARK 3 SELECTION: { A|229 - A|241 }
REMARK 3 ORIGIN FOR THE GROUP (A): 11.9667 -16.9633 -49.6563
REMARK 3 T TENSOR
REMARK 3 T11: -0.0893 T22: -0.0483
REMARK 3 T33: 0.1982 T12: 0.0289
REMARK 3 T13: 0.0374 T23: -0.1056
REMARK 3 L TENSOR
REMARK 3 L11: 0.7427 L22: 0.0791
REMARK 3 L33: 1.2145 L12: -0.8470
REMARK 3 L13: 0.8298 L23: -0.4622
REMARK 3 S TENSOR
REMARK 3 S11: -0.0291 S12: 0.1245 S13: -0.4832
REMARK 3 S21: -0.2448 S22: 0.1114 S23: -0.1902
REMARK 3 S31: 0.0076 S32: 0.2333 S33: -0.0823
REMARK 3
REMARK 3 TLS GROUP : 9
REMARK 3 SELECTION: { A|242 - A|259 }
REMARK 3 ORIGIN FOR THE GROUP (A): -5.9613 -32.9625 -39.0160
REMARK 3 T TENSOR
REMARK 3 T11: 0.0101 T22: -0.1189
REMARK 3 T33: 0.0453 T12: 0.0166
REMARK 3 T13: -0.0393 T23: 0.0197
REMARK 3 L TENSOR
REMARK 3 L11: 0.1454 L22: 3.7481
REMARK 3 L33: 0.3622 L12: 1.6491
REMARK 3 L13: -0.2234 L23: 0.2809
REMARK 3 S TENSOR
REMARK 3 S11: -0.0291 S12: -0.0306 S13: 0.0302
REMARK 3 S21: 0.1710 S22: 0.0770 S23: -0.5434
REMARK 3 S31: 0.1824 S32: 0.0950 S33: -0.0479
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 6HXP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-OCT-18.
REMARK 100 THE DEPOSITION ID IS D_1200012457.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 25-OCT-17
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 7.5
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : SLS
REMARK 200 BEAMLINE : X06DA
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 1.00003
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : PIXEL
REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 2M
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS
REMARK 200 DATA SCALING SOFTWARE : AIMLESS
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 63972
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.450
REMARK 200 RESOLUTION RANGE LOW (A) : 48.000
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9
REMARK 200 DATA REDUNDANCY : 6.700
REMARK 200 R MERGE (I) : NULL
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.2900
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.45
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.54
REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5
REMARK 200 DATA REDUNDANCY IN SHELL : 6.00
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : 0.880
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: ACL HOLOENZYME STRUCTURE FROM C. LIMICOLA
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 58.88
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.99
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 45% MPD 0.1 M HEPES PH 7.5 200 MM NH4
REMARK 280 ACETATE PROTEIN SAMPLE BUFFER 20 MM HEPES, 150 MM NACL, PH 7.4
REMARK 280 SUPPLEMENTED WITH 10 MM COASH, VAPOR DIFFUSION, SITTING DROP,
REMARK 280 TEMPERATURE 293K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 2 2
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2
REMARK 290 3555 -Y,X+1/2,Z+1/4
REMARK 290 4555 Y+1/2,-X,Z+3/4
REMARK 290 5555 -X+1/2,Y,-Z+3/4
REMARK 290 6555 X,-Y+1/2,-Z+1/4
REMARK 290 7555 Y+1/2,X+1/2,-Z+1/2
REMARK 290 8555 -Y,-X,-Z
REMARK 290 9555 X+1/2,Y+1/2,Z+1/2
REMARK 290 10555 -X,-Y,Z
REMARK 290 11555 -Y+1/2,X,Z+3/4
REMARK 290 12555 Y,-X+1/2,Z+1/4
REMARK 290 13555 -X,Y+1/2,-Z+1/4
REMARK 290 14555 X+1/2,-Y,-Z+3/4
REMARK 290 15555 Y,X,-Z
REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 65.29800
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 65.29800
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 41.97350
REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 65.29800
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 20.98675
REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 65.29800
REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 62.96025
REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 65.29800
REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 62.96025
REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 65.29800
REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 20.98675
REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 65.29800
REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 65.29800
REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 41.97350
REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 65.29800
REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 65.29800
REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 41.97350
REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 65.29800
REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 62.96025
REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 65.29800
REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 20.98675
REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 65.29800
REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 20.98675
REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 65.29800
REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 62.96025
REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 65.29800
REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 65.29800
REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 41.97350
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 31440 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 38400 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -310.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000
REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -83.94700
REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 3 0.000000 -1.000000 0.000000 0.00000
REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000
REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT2 4 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 -83.94700
REMARK 375
REMARK 375 SPECIAL POSITION
REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS
REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL
REMARK 375 POSITIONS.
REMARK 375
REMARK 375 ATOM RES CSSEQI
REMARK 375 HOH A 448 LIES ON A SPECIAL POSITION.
REMARK 375 HOH A 530 LIES ON A SPECIAL POSITION.
REMARK 375 HOH A 595 LIES ON A SPECIAL POSITION.
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 MET A 1
REMARK 465 GLU A 2
REMARK 465 ILE A 259
REMARK 465 GLY A 260
REMARK 465 GLY A 261
REMARK 465 SER A 262
REMARK 465 HIS A 263
REMARK 465 HIS A 264
REMARK 465 HIS A 265
REMARK 465 HIS A 266
REMARK 465 HIS A 267
REMARK 465 HIS A 268
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 HIS A 15 -5.50 69.42
REMARK 500 HIS A 99 53.41 -147.67
REMARK 500
REMARK 500 REMARK: NULL
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue COA A 300
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 301
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 302
DBREF 6HXP A 1 259 UNP Q75VX1 Q75VX1_HYDTH 1 259
SEQADV 6HXP GLY A 260 UNP Q75VX1 EXPRESSION TAG
SEQADV 6HXP GLY A 261 UNP Q75VX1 EXPRESSION TAG
SEQADV 6HXP SER A 262 UNP Q75VX1 EXPRESSION TAG
SEQADV 6HXP HIS A 263 UNP Q75VX1 EXPRESSION TAG
SEQADV 6HXP HIS A 264 UNP Q75VX1 EXPRESSION TAG
SEQADV 6HXP HIS A 265 UNP Q75VX1 EXPRESSION TAG
SEQADV 6HXP HIS A 266 UNP Q75VX1 EXPRESSION TAG
SEQADV 6HXP HIS A 267 UNP Q75VX1 EXPRESSION TAG
SEQADV 6HXP HIS A 268 UNP Q75VX1 EXPRESSION TAG
SEQRES 1 A 268 MET GLU ARG ILE TRP LYS THR GLY ILE THR GLN HIS ILE
SEQRES 2 A 268 GLY HIS GLU THR TYR ILE ARG GLY TYR ARG LEU LEU ASP
SEQRES 3 A 268 LEU VAL GLY ASN LEU SER PHE ALA GLN ALA ILE TYR LEU
SEQRES 4 A 268 ILE LEU LYS GLY GLU LEU PRO THR GLU ARG GLU SER ARG
SEQRES 5 A 268 MET MET GLU ALA MET LEU VAL SER VAL ILE ASP HIS GLY
SEQRES 6 A 268 ILE ALA PRO PRO SER ALA ILE ALA ALA ARG SER VAL ALA
SEQRES 7 A 268 SER GLY GLY ASN SER LEU ASN VAL GLY VAL ALA ALA GLY
SEQRES 8 A 268 VAL LEU ALA PHE GLY SER ALA HIS GLY GLY ALA LEU GLU
SEQRES 9 A 268 ASP ALA MET ARG PHE ILE GLN GLU GLY VAL SER SER LYS
SEQRES 10 A 268 ARG SER VAL GLU ASP ILE VAL LYS GLU TYR LEU GLU THR
SEQRES 11 A 268 LYS LYS PRO ILE PRO GLY TYR GLY HIS ARG TYR TYR LYS
SEQRES 12 A 268 ASP PHE ASP PRO ARG THR LYS ARG LEU MET ASP ILE ALA
SEQRES 13 A 268 ARG VAL LEU GLU PHE TYR GLY GLU HIS CYS LYS PHE ALA
SEQRES 14 A 268 GLU ASP VAL ALA GLU GLU ILE GLY ARG GLN LYS GLY LYS
SEQRES 15 A 268 LYS LEU VAL LEU ASN VAL ASP GLY ALA ILE ALA ALA ILE
SEQRES 16 A 268 ALA SER GLU MET GLY PHE ASP TRP ARG LEU GLY LYS GLY
SEQRES 17 A 268 PHE PHE ILE ILE GLY ARG VAL PRO GLY LEU VAL ALA HIS
SEQRES 18 A 268 VAL TYR GLU GLU LEU THR THR GLU LYS PRO PHE SER LYS
SEQRES 19 A 268 ARG LEU ASP GLU GLU ARG ASP VAL GLU TYR THR GLY SER
SEQRES 20 A 268 PRO PRO ARG GLU LEU PRO GLN GLU LEU LYS LYS ILE GLY
SEQRES 21 A 268 GLY SER HIS HIS HIS HIS HIS HIS
HET COA A 300 157
HET SO4 A 301 5
HET SO4 A 302 5
HETNAM COA COENZYME A
HETNAM SO4 SULFATE ION
FORMUL 2 COA C21 H36 N7 O16 P3 S
FORMUL 3 SO4 2(O4 S 2-)
FORMUL 5 HOH *211(H2 O)
HELIX 1 AA1 LEU A 24 VAL A 28 1 5
HELIX 2 AA2 SER A 32 GLY A 43 1 12
HELIX 3 AA3 THR A 47 VAL A 61 1 15
HELIX 4 AA4 PRO A 68 GLY A 80 1 13
HELIX 5 AA5 SER A 83 ALA A 94 1 12
HELIX 6 AA6 GLY A 100 LYS A 117 1 18
HELIX 7 AA7 SER A 119 THR A 130 1 12
HELIX 8 AA8 ASP A 146 LEU A 159 1 14
HELIX 9 AA9 GLY A 163 GLY A 181 1 19
HELIX 10 AB1 ASN A 187 MET A 199 1 13
HELIX 11 AB2 ASP A 202 ARG A 204 5 3
HELIX 12 AB3 LEU A 205 GLU A 229 1 25
HELIX 13 AB4 ASP A 237 VAL A 242 1 6
HELIX 14 AB5 PRO A 253 LYS A 257 5 5
SHEET 1 AA1 3 THR A 10 ILE A 13 0
SHEET 2 AA1 3 GLU A 16 ILE A 19 -1 O TYR A 18 N GLN A 11
SHEET 3 AA1 3 TYR A 22 ARG A 23 -1 O TYR A 22 N ILE A 19
SITE 1 AC1 18 ALA A 102 ASP A 105 LYS A 132 PRO A 133
SITE 2 AC1 18 ILE A 134 PRO A 135 GLY A 136 TYR A 137
SITE 3 AC1 18 GLY A 138 ARG A 140 LYS A 143 LYS A 180
SITE 4 AC1 18 LYS A 182 LEU A 184 HOH A 433 HOH A 454
SITE 5 AC1 18 HOH A 495 HOH A 584
SITE 1 AC2 6 GLN A 35 PRO A 46 THR A 47 GLU A 48
SITE 2 AC2 6 SER A 51 HOH A 401
SITE 1 AC3 5 GLY A 29 LEU A 31 HOH A 428 HOH A 476
SITE 2 AC3 5 HOH A 517
CRYST1 130.596 130.596 83.947 90.00 90.00 90.00 I 41 2 2 16
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.007657 0.000000 0.000000 0.00000
SCALE2 0.000000 0.007657 0.000000 0.00000
SCALE3 0.000000 0.000000 0.011912 0.00000