HEADER TRANSFERASE 19-OCT-18 6HY2 TITLE STRUCTURE GUIDED DESIGN OF AN ANTIBACTERIAL PEPTIDE THAT TARGETS UDP- TITLE 2 N-ACETYLGLUCOSAMINE ACYLTRANSFERASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACYL-[ACYL-CARRIER-PROTEIN]--UDP-N-ACETYLGLUCOSAMINE O- COMPND 3 ACYLTRANSFERASE; COMPND 4 CHAIN: X; COMPND 5 SYNONYM: UDP-N-ACETYLGLUCOSAMINE ACYLTRANSFERASE; COMPND 6 EC: 2.3.1.129; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: TRP-MET-LEU-ASP-PRO-ILE-ALA-GLY-LYS-TRP-SER-ARG; COMPND 10 CHAIN: A; COMPND 11 ENGINEERED: YES; COMPND 12 OTHER_DETAILS: PEPTIDE CR20 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: LPXA, B0181, JW0176; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: PLYSE; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PTO1; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 12 ORGANISM_TAXID: 562 KEYWDS LPXA, ANTIBIOTICS, INHIBITOR, ACYLTRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.H.WILLIAMS,M.DANGKULWANICH REVDAT 4 01-MAY-24 6HY2 1 REMARK REVDAT 3 30-MAR-22 6HY2 1 REMARK REVDAT 2 20-MAR-19 6HY2 1 JRNL REVDAT 1 23-JAN-19 6HY2 0 JRNL AUTH M.DANGKULWANICH,C.R.H.RAETZ,A.H.WILLIAMS JRNL TITL STRUCTURE GUIDED DESIGN OF AN ANTIBACTERIAL PEPTIDE THAT JRNL TITL 2 TARGETS UDP-N-ACETYLGLUCOSAMINE ACYLTRANSFERASE. JRNL REF SCI REP V. 9 3947 2019 JRNL REFN ESSN 2045-2322 JRNL PMID 30850651 JRNL DOI 10.1038/S41598-019-40418-8 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 21.65 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 37837 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2011 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2633 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.86 REMARK 3 BIN R VALUE (WORKING SET) : 0.5830 REMARK 3 BIN FREE R VALUE SET COUNT : 133 REMARK 3 BIN FREE R VALUE : 0.6610 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2074 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 400 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.096 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.095 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.066 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.860 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.948 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2146 ; 0.007 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2915 ; 1.091 ; 1.938 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 284 ; 5.842 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 93 ;38.058 ;23.333 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 354 ;10.826 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;17.379 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 331 ; 0.072 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1634 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1142 ; 0.190 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1483 ; 0.302 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 353 ; 0.119 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 88 ; 0.162 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 50 ; 0.118 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1413 ; 0.471 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2203 ; 0.722 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 823 ; 1.266 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 706 ; 2.103 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6HY2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-OCT-18. REMARK 100 THE DEPOSITION ID IS D_1200012502. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUN-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU R-AXIS IV REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5415 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN A200 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34668 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 21.650 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.69 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: ILXA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.0 M NA/K PHOSPHATE, PH 6.3-6.9, PH REMARK 280 7.4, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 297.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 48.40450 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.40450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.40450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 48.40450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 48.40450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 48.40450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 48.40450 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 48.40450 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 48.40450 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 48.40450 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 48.40450 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 48.40450 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 48.40450 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 48.40450 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 48.40450 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 48.40450 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 48.40450 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 48.40450 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29130 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -69.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: X, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 48.40450 REMARK 350 BIOMT3 2 0.000000 -1.000000 0.000000 48.40450 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 -48.40450 REMARK 350 BIOMT2 3 0.000000 0.000000 -1.000000 48.40450 REMARK 350 BIOMT3 3 -1.000000 0.000000 0.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH X 575 LIES ON A SPECIAL POSITION. REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET X 1 CG SD CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN X 23 17.72 57.89 REMARK 500 PHE X 150 -2.09 69.46 REMARK 500 PHE X 162 -7.10 77.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH X 680 DISTANCE = 5.96 ANGSTROMS DBREF 6HY2 X 1 262 UNP P0A722 LPXA_ECOLI 1 262 DBREF 6HY2 A 1 12 PDB 6HY2 6HY2 1 12 SEQRES 1 X 262 MET ILE ASP LYS SER ALA PHE VAL HIS PRO THR ALA ILE SEQRES 2 X 262 VAL GLU GLU GLY ALA SER ILE GLY ALA ASN ALA HIS ILE SEQRES 3 X 262 GLY PRO PHE CYS ILE VAL GLY PRO HIS VAL GLU ILE GLY SEQRES 4 X 262 GLU GLY THR VAL LEU LYS SER HIS VAL VAL VAL ASN GLY SEQRES 5 X 262 HIS THR LYS ILE GLY ARG ASP ASN GLU ILE TYR GLN PHE SEQRES 6 X 262 ALA SER ILE GLY GLU VAL ASN GLN ASP LEU LYS TYR ALA SEQRES 7 X 262 GLY GLU PRO THR ARG VAL GLU ILE GLY ASP ARG ASN ARG SEQRES 8 X 262 ILE ARG GLU SER VAL THR ILE HIS ARG GLY THR VAL GLN SEQRES 9 X 262 GLY GLY GLY LEU THR LYS VAL GLY SER ASP ASN LEU LEU SEQRES 10 X 262 MET ILE ASN ALA HIS ILE ALA HIS ASP CYS THR VAL GLY SEQRES 11 X 262 ASN ARG CYS ILE LEU ALA ASN ASN ALA THR LEU ALA GLY SEQRES 12 X 262 HIS VAL SER VAL ASP ASP PHE ALA ILE ILE GLY GLY MET SEQRES 13 X 262 THR ALA VAL HIS GLN PHE CYS ILE ILE GLY ALA HIS VAL SEQRES 14 X 262 MET VAL GLY GLY CYS SER GLY VAL ALA GLN ASP VAL PRO SEQRES 15 X 262 PRO TYR VAL ILE ALA GLN GLY ASN HIS ALA THR PRO PHE SEQRES 16 X 262 GLY VAL ASN ILE GLU GLY LEU LYS ARG ARG GLY PHE SER SEQRES 17 X 262 ARG GLU ALA ILE THR ALA ILE ARG ASN ALA TYR LYS LEU SEQRES 18 X 262 ILE TYR ARG SER GLY LYS THR LEU ASP GLU VAL LYS PRO SEQRES 19 X 262 GLU ILE ALA GLU LEU ALA GLU THR TYR PRO GLU VAL LYS SEQRES 20 X 262 ALA PHE THR ASP PHE PHE ALA ARG SER THR ARG GLY LEU SEQRES 21 X 262 ILE ARG SEQRES 1 A 12 TRP MET LEU ASP PRO ILE ALA GLY LYS TRP SER ARG FORMUL 3 HOH *400(H2 O) HELIX 1 AA1 ASN X 198 ARG X 205 1 8 HELIX 2 AA2 SER X 208 ARG X 224 1 17 HELIX 3 AA3 THR X 228 GLU X 241 1 14 HELIX 4 AA4 THR X 242 GLU X 245 5 4 HELIX 5 AA5 VAL X 246 SER X 256 1 11 SHEET 1 AA111 PHE X 7 VAL X 8 0 SHEET 2 AA111 HIS X 25 ILE X 26 1 O ILE X 26 N PHE X 7 SHEET 3 AA111 VAL X 43 LEU X 44 1 O LEU X 44 N HIS X 25 SHEET 4 AA111 GLU X 61 ILE X 62 1 O ILE X 62 N VAL X 43 SHEET 5 AA111 ARG X 91 ILE X 92 1 O ILE X 92 N GLU X 61 SHEET 6 AA111 LEU X 116 LEU X 117 1 O LEU X 117 N ARG X 91 SHEET 7 AA111 ILE X 134 LEU X 135 1 O LEU X 135 N LEU X 116 SHEET 8 AA111 ILE X 152 ILE X 153 1 O ILE X 153 N ILE X 134 SHEET 9 AA111 MET X 170 VAL X 171 1 O VAL X 171 N ILE X 152 SHEET 10 AA111 VAL X 185 GLN X 188 1 O ALA X 187 N MET X 170 SHEET 11 AA111 THR X 193 VAL X 197 -1 O PHE X 195 N ILE X 186 SHEET 1 AA2 9 ILE X 13 VAL X 14 0 SHEET 2 AA2 9 ILE X 31 VAL X 32 1 O VAL X 32 N ILE X 13 SHEET 3 AA2 9 VAL X 49 VAL X 50 1 O VAL X 50 N ILE X 31 SHEET 4 AA2 9 SER X 67 GLU X 70 1 O ILE X 68 N VAL X 49 SHEET 5 AA2 9 THR X 97 HIS X 99 1 O ILE X 98 N GLY X 69 SHEET 6 AA2 9 HIS X 122 ILE X 123 1 O ILE X 123 N THR X 97 SHEET 7 AA2 9 THR X 140 LEU X 141 1 O LEU X 141 N HIS X 122 SHEET 8 AA2 9 ALA X 158 VAL X 159 1 O VAL X 159 N THR X 140 SHEET 9 AA2 9 GLY X 176 VAL X 177 1 O VAL X 177 N ALA X 158 SHEET 1 AA3 8 SER X 19 ILE X 20 0 SHEET 2 AA3 8 VAL X 36 ILE X 38 1 O ILE X 38 N SER X 19 SHEET 3 AA3 8 HIS X 53 ILE X 56 1 O ILE X 56 N GLU X 37 SHEET 4 AA3 8 ARG X 83 ILE X 86 1 O ILE X 86 N LYS X 55 SHEET 5 AA3 8 LEU X 108 VAL X 111 1 O VAL X 111 N GLU X 85 SHEET 6 AA3 8 THR X 128 VAL X 129 1 O VAL X 129 N LYS X 110 SHEET 7 AA3 8 SER X 146 VAL X 147 1 O VAL X 147 N THR X 128 SHEET 8 AA3 8 ILE X 164 ILE X 165 1 O ILE X 165 N SER X 146 SHEET 1 AA4 2 LEU A 3 ASP A 4 0 SHEET 2 AA4 2 LYS A 9 TRP A 10 -1 O LYS A 9 N ASP A 4 CISPEP 1 ASN X 190 HIS X 191 0 -0.06 CRYST1 96.809 96.809 96.809 90.00 90.00 90.00 P 21 3 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010330 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010330 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010330 0.00000