HEADER TRANSFERASE 23-OCT-18 6HZK TITLE CRYSTAL STRUCTURE OF REDOX-INHIBITED PHOSPHORIBULOKINASE FROM TITLE 2 SYNECHOCOCCUS SP. (STRAIN PCC 6301) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHORIBULOKINASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.7.1.19; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNECHOCOCCUS SP. (STRAIN ATCC 27144 / PCC 6301 SOURCE 3 / SAUG 1402/1); SOURCE 4 ORGANISM_COMMON: ANACYSTIS NIDULANS; SOURCE 5 ORGANISM_TAXID: 269084; SOURCE 6 GENE: PRK, SYC0567_D; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PHUE-PRK4 KEYWDS PHOSPHORIBULOKINASE, CALVIN CYCLE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR R.H.WILSON,A.BRACHER,F.U.HARTL,M.HAYER-HARTL REVDAT 4 24-JAN-24 6HZK 1 REMARK REVDAT 3 17-APR-19 6HZK 1 JRNL REVDAT 2 10-APR-19 6HZK 1 JRNL REVDAT 1 27-MAR-19 6HZK 0 JRNL AUTH R.H.WILSON,M.HAYER-HARTL,A.BRACHER JRNL TITL CRYSTAL STRUCTURE OF PHOSPHORIBULOKINASE FROM SYNECHOCOCCUS JRNL TITL 2 SP. STRAIN PCC 6301. JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 75 278 2019 JRNL REFN ESSN 2053-230X JRNL PMID 30950829 JRNL DOI 10.1107/S2053230X19002693 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 29347 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.224 REMARK 3 R VALUE (WORKING SET) : 0.223 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1503 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2134 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.91 REMARK 3 BIN R VALUE (WORKING SET) : 0.3370 REMARK 3 BIN FREE R VALUE SET COUNT : 108 REMARK 3 BIN FREE R VALUE : 0.3820 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4954 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 21 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 62.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 99.67 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.38000 REMARK 3 B22 (A**2) : 0.38000 REMARK 3 B33 (A**2) : -1.23000 REMARK 3 B12 (A**2) : 0.19000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.394 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.258 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.252 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 25.046 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.938 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5061 ; 0.008 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4800 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6861 ; 1.218 ; 1.973 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11038 ; 0.789 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 620 ; 5.586 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 247 ;34.504 ;23.806 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 860 ;15.283 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 41 ;20.551 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 757 ; 0.066 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5717 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1146 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 4 332 B 4 332 18139 0.050 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 332 REMARK 3 ORIGIN FOR THE GROUP (A): -22.5790 -15.1012 -17.1247 REMARK 3 T TENSOR REMARK 3 T11: 0.2849 T22: 0.2713 REMARK 3 T33: 0.0389 T12: -0.0374 REMARK 3 T13: -0.0194 T23: -0.0192 REMARK 3 L TENSOR REMARK 3 L11: 3.1146 L22: 1.1105 REMARK 3 L33: 0.8495 L12: -0.7821 REMARK 3 L13: 0.4810 L23: 0.3033 REMARK 3 S TENSOR REMARK 3 S11: -0.0447 S12: -0.0800 S13: -0.2030 REMARK 3 S21: -0.0204 S22: -0.0335 S23: 0.1551 REMARK 3 S31: 0.1680 S32: -0.1138 S33: 0.0783 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 4 B 332 REMARK 3 ORIGIN FOR THE GROUP (A): -68.5803 11.4104 -15.1008 REMARK 3 T TENSOR REMARK 3 T11: 0.6313 T22: 1.2102 REMARK 3 T33: 0.7554 T12: 0.2391 REMARK 3 T13: -0.1599 T23: -0.0482 REMARK 3 L TENSOR REMARK 3 L11: 3.2565 L22: 2.5741 REMARK 3 L33: 1.6545 L12: -1.0388 REMARK 3 L13: -0.5346 L23: -0.5340 REMARK 3 S TENSOR REMARK 3 S11: 0.0599 S12: -0.0676 S13: 0.4281 REMARK 3 S21: -0.0017 S22: 0.2058 S23: 1.0464 REMARK 3 S31: -0.4773 S32: -0.9879 S33: -0.2657 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 6HZK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-OCT-18. REMARK 100 THE DEPOSITION ID IS D_1200012451. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-FEB-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.03320 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS VERSION NOV 1, 2016 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 1.9.16 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30873 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 49.120 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.600 REMARK 200 R MERGE (I) : 0.07300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.80 REMARK 200 R MERGE FOR SHELL (I) : 1.41800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP 11.2.08 REMARK 200 STARTING MODEL: PRELIMINARY VERSION OF 6HZL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.67 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20 % PEG-3350, 200 MM AMMONIUM REMARK 280 FLUORIDE, PH 8.0, VAPOR DIFFUSION, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 70.41250 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 40.65268 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 68.56933 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 70.41250 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 40.65268 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 68.56933 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 70.41250 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 40.65268 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 68.56933 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 70.41250 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 40.65268 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 68.56933 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 70.41250 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 40.65268 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 68.56933 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 70.41250 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 40.65268 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 68.56933 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 81.30535 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 137.13867 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 81.30535 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 137.13867 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 81.30535 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 137.13867 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 81.30535 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 137.13867 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 81.30535 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 137.13867 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 81.30535 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 137.13867 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28630 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 1.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 LYS A 3 REMARK 465 VAL A 333 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 LYS B 3 REMARK 465 ASP B 15 REMARK 465 SER B 16 REMARK 465 GLY B 17 REMARK 465 CYS B 18 REMARK 465 GLY B 19 REMARK 465 LYS B 20 REMARK 465 ASP B 133 REMARK 465 ASP B 134 REMARK 465 GLU B 135 REMARK 465 VAL B 136 REMARK 465 LYS B 137 REMARK 465 ILE B 138 REMARK 465 ALA B 139 REMARK 465 TRP B 140 REMARK 465 LYS B 141 REMARK 465 ILE B 142 REMARK 465 GLN B 143 REMARK 465 ARG B 144 REMARK 465 ASP B 145 REMARK 465 MET B 146 REMARK 465 ALA B 147 REMARK 465 GLU B 148 REMARK 465 ARG B 149 REMARK 465 GLY B 150 REMARK 465 HIS B 151 REMARK 465 SER B 152 REMARK 465 TYR B 153 REMARK 465 GLU B 154 REMARK 465 ASP B 155 REMARK 465 VAL B 156 REMARK 465 LEU B 157 REMARK 465 ALA B 158 REMARK 465 SER B 159 REMARK 465 ILE B 160 REMARK 465 VAL B 333 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 20 CG CD CE NZ REMARK 470 GLU A 34 CG CD OE1 OE2 REMARK 470 ARG A 149 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 264 CG CD OE1 OE2 REMARK 470 GLU B 34 CG CD OE1 OE2 REMARK 470 GLU B 264 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 135 CG GLU A 135 CD 0.143 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 5 98.20 -60.99 REMARK 500 PHE A 218 -73.34 71.01 REMARK 500 SER A 236 -174.36 -66.14 REMARK 500 ASP B 5 97.13 -62.20 REMARK 500 PRO B 98 157.03 -49.46 REMARK 500 ASP B 193 96.90 -58.05 REMARK 500 PHE B 218 -73.05 69.99 REMARK 500 REMARK 500 REMARK: NULL DBREF1 6HZK A 1 333 UNP A0A0H3K6J7_SYNP6 DBREF2 6HZK A A0A0H3K6J7 1 333 DBREF1 6HZK B 1 333 UNP A0A0H3K6J7_SYNP6 DBREF2 6HZK B A0A0H3K6J7 1 333 SEQRES 1 A 333 MET SER LYS PRO ASP ARG VAL VAL LEU ILE GLY VAL ALA SEQRES 2 A 333 GLY ASP SER GLY CYS GLY LYS SER THR PHE LEU ASN ARG SEQRES 3 A 333 LEU ALA ASP LEU PHE GLY THR GLU LEU MET THR VAL ILE SEQRES 4 A 333 CYS LEU ASP ASP TYR HIS SER LEU ASP ARG LYS GLY ARG SEQRES 5 A 333 LYS GLU ALA GLY VAL THR ALA LEU ASP PRO ARG ALA ASN SEQRES 6 A 333 ASN PHE ASP LEU MET TYR GLU GLN VAL LYS ALA LEU LYS SEQRES 7 A 333 ASN GLY GLU THR ILE MET LYS PRO ILE TYR ASN HIS GLU SEQRES 8 A 333 THR GLY LEU ILE ASP PRO PRO GLU LYS ILE GLU PRO ASN SEQRES 9 A 333 ARG ILE ILE VAL ILE GLU GLY LEU HIS PRO LEU TYR ASP SEQRES 10 A 333 GLU ARG VAL ARG GLU LEU LEU ASP PHE SER VAL TYR LEU SEQRES 11 A 333 ASP ILE ASP ASP GLU VAL LYS ILE ALA TRP LYS ILE GLN SEQRES 12 A 333 ARG ASP MET ALA GLU ARG GLY HIS SER TYR GLU ASP VAL SEQRES 13 A 333 LEU ALA SER ILE GLU ALA ARG ARG PRO ASP PHE LYS ALA SEQRES 14 A 333 TYR ILE GLU PRO GLN ARG GLY HIS ALA ASP ILE VAL ILE SEQRES 15 A 333 ARG VAL MET PRO THR GLN LEU ILE PRO ASN ASP THR GLU SEQRES 16 A 333 ARG LYS VAL LEU ARG VAL GLN LEU ILE GLN ARG GLU GLY SEQRES 17 A 333 ARG ASP GLY PHE GLU PRO ALA TYR LEU PHE ASP GLU GLY SEQRES 18 A 333 SER THR ILE GLN TRP THR PRO CYS GLY ARG LYS LEU THR SEQRES 19 A 333 CYS SER TYR PRO GLY ILE ARG LEU ALA TYR GLY PRO ASP SEQRES 20 A 333 THR TYR TYR GLY HIS GLU VAL SER VAL LEU GLU VAL ASP SEQRES 21 A 333 GLY GLN PHE GLU ASN LEU GLU GLU MET ILE TYR VAL GLU SEQRES 22 A 333 GLY HIS LEU SER LYS THR ASP THR GLN TYR TYR GLY GLU SEQRES 23 A 333 LEU THR HIS LEU LEU LEU GLN HIS LYS ASP TYR PRO GLY SEQRES 24 A 333 SER ASN ASN GLY THR GLY LEU PHE GLN VAL LEU THR GLY SEQRES 25 A 333 LEU LYS MET ARG ALA ALA TYR GLU ARG LEU THR SER GLN SEQRES 26 A 333 ALA ALA PRO VAL ALA ALA SER VAL SEQRES 1 B 333 MET SER LYS PRO ASP ARG VAL VAL LEU ILE GLY VAL ALA SEQRES 2 B 333 GLY ASP SER GLY CYS GLY LYS SER THR PHE LEU ASN ARG SEQRES 3 B 333 LEU ALA ASP LEU PHE GLY THR GLU LEU MET THR VAL ILE SEQRES 4 B 333 CYS LEU ASP ASP TYR HIS SER LEU ASP ARG LYS GLY ARG SEQRES 5 B 333 LYS GLU ALA GLY VAL THR ALA LEU ASP PRO ARG ALA ASN SEQRES 6 B 333 ASN PHE ASP LEU MET TYR GLU GLN VAL LYS ALA LEU LYS SEQRES 7 B 333 ASN GLY GLU THR ILE MET LYS PRO ILE TYR ASN HIS GLU SEQRES 8 B 333 THR GLY LEU ILE ASP PRO PRO GLU LYS ILE GLU PRO ASN SEQRES 9 B 333 ARG ILE ILE VAL ILE GLU GLY LEU HIS PRO LEU TYR ASP SEQRES 10 B 333 GLU ARG VAL ARG GLU LEU LEU ASP PHE SER VAL TYR LEU SEQRES 11 B 333 ASP ILE ASP ASP GLU VAL LYS ILE ALA TRP LYS ILE GLN SEQRES 12 B 333 ARG ASP MET ALA GLU ARG GLY HIS SER TYR GLU ASP VAL SEQRES 13 B 333 LEU ALA SER ILE GLU ALA ARG ARG PRO ASP PHE LYS ALA SEQRES 14 B 333 TYR ILE GLU PRO GLN ARG GLY HIS ALA ASP ILE VAL ILE SEQRES 15 B 333 ARG VAL MET PRO THR GLN LEU ILE PRO ASN ASP THR GLU SEQRES 16 B 333 ARG LYS VAL LEU ARG VAL GLN LEU ILE GLN ARG GLU GLY SEQRES 17 B 333 ARG ASP GLY PHE GLU PRO ALA TYR LEU PHE ASP GLU GLY SEQRES 18 B 333 SER THR ILE GLN TRP THR PRO CYS GLY ARG LYS LEU THR SEQRES 19 B 333 CYS SER TYR PRO GLY ILE ARG LEU ALA TYR GLY PRO ASP SEQRES 20 B 333 THR TYR TYR GLY HIS GLU VAL SER VAL LEU GLU VAL ASP SEQRES 21 B 333 GLY GLN PHE GLU ASN LEU GLU GLU MET ILE TYR VAL GLU SEQRES 22 B 333 GLY HIS LEU SER LYS THR ASP THR GLN TYR TYR GLY GLU SEQRES 23 B 333 LEU THR HIS LEU LEU LEU GLN HIS LYS ASP TYR PRO GLY SEQRES 24 B 333 SER ASN ASN GLY THR GLY LEU PHE GLN VAL LEU THR GLY SEQRES 25 B 333 LEU LYS MET ARG ALA ALA TYR GLU ARG LEU THR SER GLN SEQRES 26 B 333 ALA ALA PRO VAL ALA ALA SER VAL FORMUL 3 HOH *21(H2 O) HELIX 1 AA1 SER A 21 GLY A 32 1 12 HELIX 2 AA2 ASP A 42 HIS A 45 5 4 HELIX 3 AA3 ASP A 48 GLY A 56 1 9 HELIX 4 AA4 ASP A 61 ASN A 65 5 5 HELIX 5 AA5 ASN A 66 ASN A 79 1 14 HELIX 6 AA6 ASP A 117 LEU A 124 1 8 HELIX 7 AA7 ASP A 133 ARG A 149 1 17 HELIX 8 AA8 TYR A 153 ILE A 171 1 19 HELIX 9 AA9 GLU A 172 ALA A 178 5 7 HELIX 10 AB1 ASN A 265 HIS A 275 1 11 HELIX 11 AB2 GLY A 285 LEU A 292 1 8 HELIX 12 AB3 ASN A 302 SER A 324 1 23 HELIX 13 AB4 THR B 22 GLY B 32 1 11 HELIX 14 AB5 ASP B 42 HIS B 45 5 4 HELIX 15 AB6 ASP B 48 GLY B 56 1 9 HELIX 16 AB7 ASP B 61 ASN B 65 5 5 HELIX 17 AB8 ASN B 66 ASN B 79 1 14 HELIX 18 AB9 ASP B 117 LEU B 124 1 8 HELIX 19 AC1 ARG B 163 ILE B 171 1 9 HELIX 20 AC2 GLU B 172 ALA B 178 5 7 HELIX 21 AC3 ASN B 265 HIS B 275 1 11 HELIX 22 AC4 GLY B 285 LEU B 292 1 8 HELIX 23 AC5 ASN B 302 SER B 324 1 23 SHEET 1 AA118 MET A 36 CYS A 40 0 SHEET 2 AA118 ILE A 106 GLY A 111 1 O VAL A 108 N ILE A 39 SHEET 3 AA118 VAL A 8 ALA A 13 1 N ILE A 10 O ILE A 109 SHEET 4 AA118 PHE A 126 ILE A 132 1 O VAL A 128 N ALA A 13 SHEET 5 AA118 ILE A 180 PRO A 186 1 O ILE A 182 N ASP A 131 SHEET 6 AA118 LEU A 199 ARG A 206 -1 O ARG A 200 N MET A 185 SHEET 7 AA118 HIS A 252 GLY A 261 -1 O LEU A 257 N LEU A 203 SHEET 8 AA118 ILE A 240 TYR A 249 -1 N GLY A 245 O VAL A 256 SHEET 9 AA118 SER A 222 GLY A 230 -1 N TRP A 226 O LEU A 242 SHEET 10 AA118 SER B 222 GLY B 230 -1 O THR B 223 N THR A 227 SHEET 11 AA118 ILE B 240 TYR B 249 -1 O LEU B 242 N TRP B 226 SHEET 12 AA118 HIS B 252 GLY B 261 -1 O VAL B 254 N ASP B 247 SHEET 13 AA118 LEU B 199 ARG B 206 -1 N LEU B 203 O LEU B 257 SHEET 14 AA118 ILE B 180 PRO B 186 -1 N MET B 185 O ARG B 200 SHEET 15 AA118 PHE B 126 ASP B 131 1 N ASP B 131 O ILE B 182 SHEET 16 AA118 VAL B 8 ALA B 13 1 N ALA B 13 O VAL B 128 SHEET 17 AA118 ILE B 106 GLY B 111 1 O ILE B 109 N ILE B 10 SHEET 18 AA118 MET B 36 CYS B 40 1 N ILE B 39 O VAL B 108 SHEET 1 AA2 2 ILE A 83 ASN A 89 0 SHEET 2 AA2 2 LEU A 94 ILE A 101 -1 O ASP A 96 N ILE A 87 SHEET 1 AA3 2 TYR A 216 LEU A 217 0 SHEET 2 AA3 2 LEU A 276 SER A 277 -1 O SER A 277 N TYR A 216 SHEET 1 AA4 2 ILE B 83 ASN B 89 0 SHEET 2 AA4 2 LEU B 94 ILE B 101 -1 O ASP B 96 N ILE B 87 SHEET 1 AA5 2 TYR B 216 LEU B 217 0 SHEET 2 AA5 2 LEU B 276 SER B 277 -1 O SER B 277 N TYR B 216 SSBOND 1 CYS A 18 CYS A 40 1555 1555 2.04 SSBOND 2 CYS A 229 CYS A 235 1555 1555 2.06 SSBOND 3 CYS B 229 CYS B 235 1555 1555 2.06 CISPEP 1 TYR A 237 PRO A 238 0 2.23 CISPEP 2 TYR B 237 PRO B 238 0 2.62 CRYST1 140.825 140.825 205.708 90.00 90.00 120.00 H 3 2 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007101 0.004100 0.000000 0.00000 SCALE2 0.000000 0.008200 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004861 0.00000