HEADER TRANSFERASE 01-NOV-18 6I2A TITLE CRYSTAL STRUCTURE OF THE PROTEIN-KINASE A CATALYTIC SUBUNIT FROM TITLE 2 CRICETULUS GRISEUS IN COMPLEX WITH COMPOUNDS RKP153 AND FASUDIL COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAMP-DEPENDENT PROTEIN KINASE CATALYTIC SUBUNIT ALPHA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PKA C-ALPHA; COMPND 5 EC: 2.7.11.11; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: UPF0418 PROTEIN FAM164A; COMPND 9 CHAIN: D; COMPND 10 ENGINEERED: YES; COMPND 11 OTHER_DETAILS: PKI 5-22 WITH T16RBT MUTATION. A RIBOSE IS COVALENTLY COMPND 12 ATTACHED TO THE THREONINE IN THIS POSITION SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CRICETULUS GRISEUS; SOURCE 3 ORGANISM_COMMON: CHINESE HAMSTER; SOURCE 4 ORGANISM_TAXID: 10029; SOURCE 5 ORGAN: OVARY; SOURCE 6 TISSUE: OVARY; SOURCE 7 GENE: PRKACA; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: CRICETULUS GRISEUS; SOURCE 13 ORGANISM_COMMON: CHINESE HAMSTER; SOURCE 14 ORGANISM_TAXID: 10029 KEYWDS COMPLEX, PEPTIDIC LIGAND, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.M.MUELLER,A.HEINE,G.KLEBE REVDAT 2 29-JUL-20 6I2A 1 COMPND REMARK HETNAM HETSYN REVDAT 2 2 1 SITE REVDAT 1 15-MAY-19 6I2A 0 SPRSDE 15-MAY-19 6I2A 6EMB JRNL AUTH J.M.MUELLER,R.KIRSCHNER,A.GEYER,G.KLEBE JRNL TITL CONCEPTIONAL DESIGN OF SELF-ASSEMBLING BISUBSTRATE-LIKE JRNL TITL 2 INHIBITORS OF PROTEIN KINASE A RESULTING IN A BORONIC ACID JRNL TITL 3 GLUTAMATE LINKAGE JRNL REF ACS OMEGA 2019 JRNL REFN ESSN 2470-1343 JRNL DOI 10.1021/ACSOMEGA.8B02364 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.09 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 48320 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2417 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.1008 - 4.4921 0.99 2872 152 0.1611 0.1927 REMARK 3 2 4.4921 - 3.5659 0.99 2772 146 0.1507 0.1609 REMARK 3 3 3.5659 - 3.1153 0.99 2721 143 0.1756 0.2103 REMARK 3 4 3.1153 - 2.8305 1.00 2726 143 0.1839 0.2410 REMARK 3 5 2.8305 - 2.6276 1.00 2700 142 0.1792 0.2327 REMARK 3 6 2.6276 - 2.4727 1.00 2711 143 0.1720 0.1989 REMARK 3 7 2.4727 - 2.3489 1.00 2705 143 0.1658 0.2025 REMARK 3 8 2.3489 - 2.2466 1.00 2699 142 0.1708 0.1996 REMARK 3 9 2.2466 - 2.1602 1.00 2705 142 0.1731 0.2244 REMARK 3 10 2.1602 - 2.0856 1.00 2697 142 0.1852 0.2088 REMARK 3 11 2.0856 - 2.0204 1.00 2670 141 0.1942 0.2343 REMARK 3 12 2.0204 - 1.9626 1.00 2678 140 0.1897 0.2226 REMARK 3 13 1.9626 - 1.9110 1.00 2717 144 0.2083 0.2364 REMARK 3 14 1.9110 - 1.8644 1.00 2658 139 0.2038 0.2509 REMARK 3 15 1.8644 - 1.8220 1.00 2676 141 0.2101 0.2610 REMARK 3 16 1.8220 - 1.7832 1.00 2675 141 0.2201 0.2360 REMARK 3 17 1.7832 - 1.7475 0.95 2521 133 0.2289 0.2515 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.510 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 3050 REMARK 3 ANGLE : 0.994 4145 REMARK 3 CHIRALITY : 0.058 440 REMARK 3 PLANARITY : 0.007 547 REMARK 3 DIHEDRAL : 15.378 1791 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 11 THROUGH 31 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.0872 -6.0830 7.2763 REMARK 3 T TENSOR REMARK 3 T11: 0.2725 T22: 0.2188 REMARK 3 T33: 0.3329 T12: 0.0619 REMARK 3 T13: 0.0204 T23: -0.0139 REMARK 3 L TENSOR REMARK 3 L11: 0.1319 L22: 0.2677 REMARK 3 L33: 0.2549 L12: 0.1371 REMARK 3 L13: 0.0255 L23: 0.1939 REMARK 3 S TENSOR REMARK 3 S11: 0.0955 S12: -0.0238 S13: 0.1646 REMARK 3 S21: -0.3252 S22: 0.1384 S23: 0.2626 REMARK 3 S31: -0.2226 S32: 0.2121 S33: 0.0059 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 32 THROUGH 54 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.1315 -20.7775 30.4776 REMARK 3 T TENSOR REMARK 3 T11: 0.2271 T22: 0.5168 REMARK 3 T33: 0.5584 T12: -0.0861 REMARK 3 T13: -0.0021 T23: 0.0913 REMARK 3 L TENSOR REMARK 3 L11: 0.0168 L22: 0.5762 REMARK 3 L33: 0.4363 L12: 0.1032 REMARK 3 L13: 0.0892 L23: 0.5016 REMARK 3 S TENSOR REMARK 3 S11: 0.1619 S12: -0.6449 S13: 0.2911 REMARK 3 S21: 0.3545 S22: -0.0762 S23: 0.2040 REMARK 3 S31: 0.0306 S32: -0.3058 S33: 0.0040 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 55 THROUGH 81 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.4821 -22.1425 31.5020 REMARK 3 T TENSOR REMARK 3 T11: 0.3112 T22: 0.5215 REMARK 3 T33: 0.2745 T12: -0.0863 REMARK 3 T13: 0.0409 T23: 0.0779 REMARK 3 L TENSOR REMARK 3 L11: 1.1644 L22: 0.6221 REMARK 3 L33: 0.4717 L12: -0.8116 REMARK 3 L13: 0.5865 L23: -0.3197 REMARK 3 S TENSOR REMARK 3 S11: 0.3211 S12: -0.2679 S13: -0.2344 REMARK 3 S21: 0.3204 S22: -0.0310 S23: 0.3953 REMARK 3 S31: -0.1049 S32: -0.3034 S33: 0.1099 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 82 THROUGH 160 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.2193 -19.7441 20.6457 REMARK 3 T TENSOR REMARK 3 T11: 0.2121 T22: 0.2474 REMARK 3 T33: 0.2228 T12: -0.0236 REMARK 3 T13: 0.0165 T23: 0.0070 REMARK 3 L TENSOR REMARK 3 L11: 0.4792 L22: 0.7296 REMARK 3 L33: 0.3408 L12: 0.2055 REMARK 3 L13: 0.2837 L23: -0.2040 REMARK 3 S TENSOR REMARK 3 S11: 0.1131 S12: -0.1546 S13: -0.1266 REMARK 3 S21: -0.0267 S22: -0.0787 S23: 0.2198 REMARK 3 S31: 0.0997 S32: -0.2131 S33: 0.0069 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 161 THROUGH 252 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.1482 -16.5296 22.2568 REMARK 3 T TENSOR REMARK 3 T11: 0.1769 T22: 0.1699 REMARK 3 T33: 0.1998 T12: -0.0120 REMARK 3 T13: -0.0050 T23: -0.0037 REMARK 3 L TENSOR REMARK 3 L11: 0.4873 L22: 1.0380 REMARK 3 L33: 1.0118 L12: -0.5671 REMARK 3 L13: -0.0173 L23: -0.4121 REMARK 3 S TENSOR REMARK 3 S11: 0.0075 S12: -0.1615 S13: 0.0483 REMARK 3 S21: 0.0007 S22: -0.0412 S23: -0.0855 REMARK 3 S31: -0.0380 S32: 0.0071 S33: 0.0000 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 253 THROUGH 297 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.8819 -17.5071 9.0449 REMARK 3 T TENSOR REMARK 3 T11: 0.2519 T22: 0.2049 REMARK 3 T33: 0.2459 T12: 0.0291 REMARK 3 T13: 0.0643 T23: 0.0444 REMARK 3 L TENSOR REMARK 3 L11: 0.2566 L22: 0.1444 REMARK 3 L33: 0.3147 L12: -0.0123 REMARK 3 L13: -0.1244 L23: -0.0791 REMARK 3 S TENSOR REMARK 3 S11: 0.0559 S12: 0.1661 S13: 0.1246 REMARK 3 S21: -0.2083 S22: -0.1305 S23: -0.2343 REMARK 3 S31: 0.0135 S32: 0.2792 S33: -0.0018 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 298 THROUGH 350 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.4474 -24.2421 22.5160 REMARK 3 T TENSOR REMARK 3 T11: 0.2301 T22: 0.2753 REMARK 3 T33: 0.2805 T12: -0.0098 REMARK 3 T13: -0.0169 T23: 0.0292 REMARK 3 L TENSOR REMARK 3 L11: 0.8907 L22: 0.8607 REMARK 3 L33: 0.1235 L12: 0.4300 REMARK 3 L13: 0.0404 L23: -0.2627 REMARK 3 S TENSOR REMARK 3 S11: 0.1880 S12: -0.1280 S13: -0.1717 REMARK 3 S21: -0.0270 S22: -0.1021 S23: 0.2715 REMARK 3 S31: 0.0709 S32: -0.1336 S33: 0.2478 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6I2A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-NOV-18. REMARK 100 THE DEPOSITION ID IS D_1200012677. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-APR-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48328 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 46.085 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 4.320 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04300 REMARK 200 FOR THE DATA SET : 19.0500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.17 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.47900 REMARK 200 FOR SHELL : 2.690 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM MES-BIS-TRIS, 75 MM LITHIUM REMARK 280 CHLORIDE, 1 MM DTT, 0.1 MM SODIUM EDTA, 0.25 MM MEGA 8, 0.7 MM REMARK 280 PEPTIDIC LIGAND, 5 MM FASUDIL, 23% V/V METHANOL/WATER IN REMARK 280 RESERVOIR, PH 6.9, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.47950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.10200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.94300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 54.10200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.47950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.94300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2440 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17010 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 1.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 8 CD CE NZ REMARK 470 LYS A 21 CG CD CE NZ REMARK 470 GLU A 24 CG CD OE1 OE2 REMARK 470 GLU A 25 CD OE1 OE2 REMARK 470 LYS A 28 CD CE NZ REMARK 470 LYS A 29 NZ REMARK 470 SER A 32 OG REMARK 470 ASN A 36 CG OD1 ND2 REMARK 470 ARG A 45 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 46 CD1 REMARK 470 THR A 51 CG2 REMARK 470 SER A 53 OG REMARK 470 LYS A 61 CE NZ REMARK 470 THR A 65 CG2 REMARK 470 LYS A 76 NZ REMARK 470 LYS A 78 CD CE NZ REMARK 470 VAL A 80 CG1 REMARK 470 LYS A 81 CG CD CE NZ REMARK 470 LEU A 82 CD1 CD2 REMARK 470 LYS A 83 CG CD CE NZ REMARK 470 ILE A 135 CG1 CD1 REMARK 470 LYS A 213 CE NZ REMARK 470 ILE A 244 CG1 CG2 CD1 REMARK 470 LYS A 254 CD CE NZ REMARK 470 ARG A 256 CD NE CZ NH1 NH2 REMARK 470 LYS A 285 CG CD CE NZ REMARK 470 LYS A 295 CD CE NZ REMARK 470 ILE A 303 CD1 REMARK 470 LYS A 317 CG CD CE NZ REMARK 470 PHE A 318 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 319 CG CD CE NZ REMARK 470 GLU A 331 CG CD OE1 OE2 REMARK 470 GLU A 332 CG CD OE1 OE2 REMARK 470 GLU A 333 CG CD OE1 OE2 REMARK 470 GLU A 334 CG CD OE1 OE2 REMARK 470 ILE A 335 CD1 REMARK 470 ARG A 336 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 339 CG1 CG2 CD1 REMARK 470 ASN A 340 CG OD1 ND2 REMARK 470 LYS A 342 CG CD CE NZ REMARK 470 LYS A 345 CG CD CE NZ REMARK 470 THR A 348 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 144 NE - CZ - NH2 ANGL. DEV. = 3.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 165 -0.61 69.95 REMARK 500 LEU A 273 47.45 -85.89 REMARK 500 LYS A 319 36.57 -88.85 REMARK 500 ARG D 15 49.24 -90.76 REMARK 500 REMARK 500 REMARK: NULL DBREF 6I2A A 0 350 UNP P25321 KAPCA_CRIGR 1 351 DBREF 6I2A D 5 22 UNP G3HK48 G3HK48_CRIGR 6 23 SEQADV 6I2A GLY A -2 UNP P25321 EXPRESSION TAG SEQADV 6I2A HIS A -1 UNP P25321 EXPRESSION TAG SEQADV 6I2A ASP D 20 UNP G3HK48 ASN 21 CONFLICT SEQRES 1 A 353 GLY HIS MET GLY ASN ALA ALA ALA ALA LYS LYS GLY SEP SEQRES 2 A 353 GLU GLN GLU SER VAL LYS GLU PHE LEU ALA LYS ALA LYS SEQRES 3 A 353 GLU GLU PHE LEU LYS LYS TRP GLU SER PRO SER GLN ASN SEQRES 4 A 353 THR ALA GLN LEU ASP HIS PHE ASP ARG ILE LYS THR LEU SEQRES 5 A 353 GLY THR GLY SER PHE GLY ARG VAL MET LEU VAL LYS HIS SEQRES 6 A 353 LYS GLU THR GLY ASN HIS TYR ALA MET LYS ILE LEU ASP SEQRES 7 A 353 LYS GLN LYS VAL VAL LYS LEU LYS GLN ILE GLU HIS THR SEQRES 8 A 353 LEU ASN GLU LYS ARG ILE LEU GLN ALA VAL ASN PHE PRO SEQRES 9 A 353 PHE LEU VAL LYS LEU GLU PHE SER PHE LYS ASP ASN SER SEQRES 10 A 353 ASN LEU TYR MET VAL MET GLU TYR VAL PRO GLY GLY GLU SEQRES 11 A 353 MET PHE SER HIS LEU ARG ARG ILE GLY ARG PHE SEP GLU SEQRES 12 A 353 PRO HIS ALA ARG PHE TYR ALA ALA GLN ILE VAL LEU THR SEQRES 13 A 353 PHE GLU TYR LEU HIS SER LEU ASP LEU ILE TYR ARG ASP SEQRES 14 A 353 LEU LYS PRO GLU ASN LEU LEU ILE ASP GLN GLN GLY TYR SEQRES 15 A 353 ILE GLN VAL THR ASP PHE GLY PHE ALA LYS ARG VAL LYS SEQRES 16 A 353 GLY ARG THR TRP TPO LEU CYS GLY THR PRO GLU TYR LEU SEQRES 17 A 353 ALA PRO GLU ILE ILE LEU SER LYS GLY TYR ASN LYS ALA SEQRES 18 A 353 VAL ASP TRP TRP ALA LEU GLY VAL LEU ILE TYR GLU MET SEQRES 19 A 353 ALA ALA GLY TYR PRO PRO PHE PHE ALA ASP GLN PRO ILE SEQRES 20 A 353 GLN ILE TYR GLU LYS ILE VAL SER GLY LYS VAL ARG PHE SEQRES 21 A 353 PRO SER HIS PHE SER SER ASP LEU LYS ASP LEU LEU ARG SEQRES 22 A 353 ASN LEU LEU GLN VAL ASP LEU THR LYS ARG PHE GLY ASN SEQRES 23 A 353 LEU LYS ASN GLY VAL ASN ASP ILE LYS ASN HIS LYS TRP SEQRES 24 A 353 PHE ALA THR THR ASP TRP ILE ALA ILE TYR GLN ARG LYS SEQRES 25 A 353 VAL GLU ALA PRO PHE ILE PRO LYS PHE LYS GLY PRO GLY SEQRES 26 A 353 ASP THR SER ASN PHE ASP ASP TYR GLU GLU GLU GLU ILE SEQRES 27 A 353 ARG VAL SEP ILE ASN GLU LYS CYS GLY LYS GLU PHE THR SEQRES 28 A 353 GLU PHE SEQRES 1 D 18 THR THR TYR ALA ASP PHE ILE ALA SER GLY ARG THR GLY SEQRES 2 D 18 ARG ARG ASP ALA ILE MODRES 6I2A SEP A 10 SER MODIFIED RESIDUE MODRES 6I2A SEP A 139 SER MODIFIED RESIDUE MODRES 6I2A TPO A 197 THR MODIFIED RESIDUE MODRES 6I2A SEP A 338 SER MODIFIED RESIDUE HET SEP A 10 14 HET SEP A 139 14 HET TPO A 197 17 HET SEP A 338 13 HET M77 A 401 37 HET RIP D 101 18 HETNAM SEP PHOSPHOSERINE HETNAM TPO PHOSPHOTHREONINE HETNAM M77 5-(1,4-DIAZEPAN-1-SULFONYL)ISOQUINOLINE HETNAM RIP BETA-D-RIBOPYRANOSE HETSYN SEP PHOSPHONOSERINE HETSYN TPO PHOSPHONOTHREONINE HETSYN M77 FASUDIL; (5-ISOQUINOLINESULFONYL)HOMOPIPERAZINE FORMUL 1 SEP 3(C3 H8 N O6 P) FORMUL 1 TPO C4 H10 N O6 P FORMUL 3 M77 C14 H17 N3 O2 S FORMUL 4 RIP C5 H10 O5 FORMUL 5 HOH *184(H2 O) HELIX 1 AA1 GLY A 1 SER A 32 1 32 HELIX 2 AA2 GLN A 39 ASP A 41 5 3 HELIX 3 AA3 LYS A 76 LEU A 82 1 7 HELIX 4 AA4 GLN A 84 VAL A 98 1 15 HELIX 5 AA5 GLU A 127 GLY A 136 1 10 HELIX 6 AA6 SEP A 139 LEU A 160 1 22 HELIX 7 AA7 LYS A 168 GLU A 170 5 3 HELIX 8 AA8 THR A 201 LEU A 205 5 5 HELIX 9 AA9 ALA A 206 LEU A 211 1 6 HELIX 10 AB1 LYS A 217 GLY A 234 1 18 HELIX 11 AB2 GLN A 242 SER A 252 1 11 HELIX 12 AB3 SER A 262 LEU A 273 1 12 HELIX 13 AB4 VAL A 288 ASN A 293 1 6 HELIX 14 AB5 HIS A 294 ALA A 298 5 5 HELIX 15 AB6 ASP A 301 GLN A 307 1 7 HELIX 16 AB7 THR D 6 GLY D 14 1 9 SHEET 1 AA1 5 PHE A 43 GLY A 52 0 SHEET 2 AA1 5 GLY A 55 HIS A 62 -1 O LEU A 59 N LYS A 47 SHEET 3 AA1 5 HIS A 68 ASP A 75 -1 O MET A 71 N MET A 58 SHEET 4 AA1 5 ASN A 115 GLU A 121 -1 O MET A 120 N ALA A 70 SHEET 5 AA1 5 LEU A 106 LYS A 111 -1 N PHE A 108 O VAL A 119 SHEET 1 AA2 2 LEU A 162 ILE A 163 0 SHEET 2 AA2 2 LYS A 189 ARG A 190 -1 O LYS A 189 N ILE A 163 SHEET 1 AA3 2 LEU A 172 ILE A 174 0 SHEET 2 AA3 2 ILE A 180 VAL A 182 -1 O GLN A 181 N LEU A 173 LINK C GLY A 9 N SEP A 10 1555 1555 1.32 LINK C SEP A 10 N GLU A 11 1555 1555 1.34 LINK C PHE A 138 N SEP A 139 1555 1555 1.33 LINK C SEP A 139 N GLU A 140 1555 1555 1.34 LINK C TRP A 196 N TPO A 197 1555 1555 1.34 LINK C TPO A 197 N LEU A 198 1555 1555 1.33 LINK C VAL A 337 N SEP A 338 1555 1555 1.33 LINK C SEP A 338 N ILE A 339 1555 1555 1.34 LINK OG1 THR D 16 C1 RIP D 101 1555 1555 1.38 CRYST1 58.959 73.886 108.204 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016961 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013534 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009242 0.00000