data_6I3C # _entry.id 6I3C # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.314 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6I3C WWPDB D_1200012734 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6I3C _pdbx_database_status.recvd_initial_deposition_date 2018-11-05 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _audit_author.name 'Levy, C.W.' _audit_author.pdbx_ordinal 1 _audit_author.identifier_ORCID 0000-0002-9724-310X # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Acs Catalysis' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2155-5435 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 9 _citation.language ? _citation.page_first 4394 _citation.page_last 4401 _citation.title 'Equatorial Active Site Compaction and Electrostatic Reorganization in Catechol-O-methyltransferase.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acscatal.9b00174 _citation.pdbx_database_id_PubMed 31080692 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Czarnota, S.' 1 ? primary 'Johannissen, L.O.' 2 ? primary 'Baxter, N.J.' 3 ? primary 'Rummel, F.' 4 ? primary 'Wilson, A.L.' 5 ? primary 'Cliff, M.J.' 6 ? primary 'Levy, C.W.' 7 ? primary 'Scrutton, N.S.' 8 ? primary 'Waltho, J.P.' 9 ? primary 'Hay, S.' 10 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 116.42 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 6I3C _cell.details ? _cell.formula_units_Z ? _cell.length_a 43.694 _cell.length_a_esd ? _cell.length_b 61.749 _cell.length_b_esd ? _cell.length_c 46.071 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6I3C _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Catechol O-methyltransferase' 25970.619 1 2.1.1.6 ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 non-polymer syn S-ADENOSYLMETHIONINE 398.437 1 ? ? ? ? 4 non-polymer syn 3,5-DINITROCATECHOL 200.106 1 ? ? ? ? 5 water nat water 18.015 208 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;HHHHHHENLYFQGDTKEQRILNHVLQHAEPGNAQSVLEAIDTYCEQKEWAMNVGDKKGKIVDAVIQEHQPSVLLELGAYC GYSAVRMARLLSPGARLITIEINPDCAAITQRMVDFAGVKDKVTLVVGASQDIIPQLKKKYDVDTLDMVFLDHWKDRYLP DTLLLEECGLLRKGTVLLADNVICPGAPDFLAHVRGSSCFECTHYQSFLEYREVVDGLEKAIYKGPGSEAGP ; _entity_poly.pdbx_seq_one_letter_code_can ;HHHHHHENLYFQGDTKEQRILNHVLQHAEPGNAQSVLEAIDTYCEQKEWAMNVGDKKGKIVDAVIQEHQPSVLLELGAYC GYSAVRMARLLSPGARLITIEINPDCAAITQRMVDFAGVKDKVTLVVGASQDIIPQLKKKYDVDTLDMVFLDHWKDRYLP DTLLLEECGLLRKGTVLLADNVICPGAPDFLAHVRGSSCFECTHYQSFLEYREVVDGLEKAIYKGPGSEAGP ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 HIS n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 GLU n 1 8 ASN n 1 9 LEU n 1 10 TYR n 1 11 PHE n 1 12 GLN n 1 13 GLY n 1 14 ASP n 1 15 THR n 1 16 LYS n 1 17 GLU n 1 18 GLN n 1 19 ARG n 1 20 ILE n 1 21 LEU n 1 22 ASN n 1 23 HIS n 1 24 VAL n 1 25 LEU n 1 26 GLN n 1 27 HIS n 1 28 ALA n 1 29 GLU n 1 30 PRO n 1 31 GLY n 1 32 ASN n 1 33 ALA n 1 34 GLN n 1 35 SER n 1 36 VAL n 1 37 LEU n 1 38 GLU n 1 39 ALA n 1 40 ILE n 1 41 ASP n 1 42 THR n 1 43 TYR n 1 44 CYS n 1 45 GLU n 1 46 GLN n 1 47 LYS n 1 48 GLU n 1 49 TRP n 1 50 ALA n 1 51 MET n 1 52 ASN n 1 53 VAL n 1 54 GLY n 1 55 ASP n 1 56 LYS n 1 57 LYS n 1 58 GLY n 1 59 LYS n 1 60 ILE n 1 61 VAL n 1 62 ASP n 1 63 ALA n 1 64 VAL n 1 65 ILE n 1 66 GLN n 1 67 GLU n 1 68 HIS n 1 69 GLN n 1 70 PRO n 1 71 SER n 1 72 VAL n 1 73 LEU n 1 74 LEU n 1 75 GLU n 1 76 LEU n 1 77 GLY n 1 78 ALA n 1 79 TYR n 1 80 CYS n 1 81 GLY n 1 82 TYR n 1 83 SER n 1 84 ALA n 1 85 VAL n 1 86 ARG n 1 87 MET n 1 88 ALA n 1 89 ARG n 1 90 LEU n 1 91 LEU n 1 92 SER n 1 93 PRO n 1 94 GLY n 1 95 ALA n 1 96 ARG n 1 97 LEU n 1 98 ILE n 1 99 THR n 1 100 ILE n 1 101 GLU n 1 102 ILE n 1 103 ASN n 1 104 PRO n 1 105 ASP n 1 106 CYS n 1 107 ALA n 1 108 ALA n 1 109 ILE n 1 110 THR n 1 111 GLN n 1 112 ARG n 1 113 MET n 1 114 VAL n 1 115 ASP n 1 116 PHE n 1 117 ALA n 1 118 GLY n 1 119 VAL n 1 120 LYS n 1 121 ASP n 1 122 LYS n 1 123 VAL n 1 124 THR n 1 125 LEU n 1 126 VAL n 1 127 VAL n 1 128 GLY n 1 129 ALA n 1 130 SER n 1 131 GLN n 1 132 ASP n 1 133 ILE n 1 134 ILE n 1 135 PRO n 1 136 GLN n 1 137 LEU n 1 138 LYS n 1 139 LYS n 1 140 LYS n 1 141 TYR n 1 142 ASP n 1 143 VAL n 1 144 ASP n 1 145 THR n 1 146 LEU n 1 147 ASP n 1 148 MET n 1 149 VAL n 1 150 PHE n 1 151 LEU n 1 152 ASP n 1 153 HIS n 1 154 TRP n 1 155 LYS n 1 156 ASP n 1 157 ARG n 1 158 TYR n 1 159 LEU n 1 160 PRO n 1 161 ASP n 1 162 THR n 1 163 LEU n 1 164 LEU n 1 165 LEU n 1 166 GLU n 1 167 GLU n 1 168 CYS n 1 169 GLY n 1 170 LEU n 1 171 LEU n 1 172 ARG n 1 173 LYS n 1 174 GLY n 1 175 THR n 1 176 VAL n 1 177 LEU n 1 178 LEU n 1 179 ALA n 1 180 ASP n 1 181 ASN n 1 182 VAL n 1 183 ILE n 1 184 CYS n 1 185 PRO n 1 186 GLY n 1 187 ALA n 1 188 PRO n 1 189 ASP n 1 190 PHE n 1 191 LEU n 1 192 ALA n 1 193 HIS n 1 194 VAL n 1 195 ARG n 1 196 GLY n 1 197 SER n 1 198 SER n 1 199 CYS n 1 200 PHE n 1 201 GLU n 1 202 CYS n 1 203 THR n 1 204 HIS n 1 205 TYR n 1 206 GLN n 1 207 SER n 1 208 PHE n 1 209 LEU n 1 210 GLU n 1 211 TYR n 1 212 ARG n 1 213 GLU n 1 214 VAL n 1 215 VAL n 1 216 ASP n 1 217 GLY n 1 218 LEU n 1 219 GLU n 1 220 LYS n 1 221 ALA n 1 222 ILE n 1 223 TYR n 1 224 LYS n 1 225 GLY n 1 226 PRO n 1 227 GLY n 1 228 SER n 1 229 GLU n 1 230 ALA n 1 231 GLY n 1 232 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 232 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene COMT _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pET21a ' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code COMT_HUMAN _struct_ref.pdbx_db_accession P21964 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GDTKEQRILNHVLQHAEPGNAQSVLEAIDTYCEQKEWAMNVGDKKGKIVDAVIQEHQPSVLLELGAYCGYSAVRMARLLS PGARLITIEINPDCAAITQRMVDFAGVKDKVTLVVGASQDIIPQLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEECGLLR KGTVLLADNVICPGAPDFLAHVRGSSCFECTHYQSFLEYREVVDGLEKAIYKGPGSEAGP ; _struct_ref.pdbx_align_begin 52 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6I3C _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 13 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 232 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P21964 _struct_ref_seq.db_align_beg 52 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 271 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 221 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6I3C HIS A 1 ? UNP P21964 ? ? 'expression tag' -10 1 1 6I3C HIS A 2 ? UNP P21964 ? ? 'expression tag' -9 2 1 6I3C HIS A 3 ? UNP P21964 ? ? 'expression tag' -8 3 1 6I3C HIS A 4 ? UNP P21964 ? ? 'expression tag' -7 4 1 6I3C HIS A 5 ? UNP P21964 ? ? 'expression tag' -6 5 1 6I3C HIS A 6 ? UNP P21964 ? ? 'expression tag' -5 6 1 6I3C GLU A 7 ? UNP P21964 ? ? 'expression tag' -4 7 1 6I3C ASN A 8 ? UNP P21964 ? ? 'expression tag' -3 8 1 6I3C LEU A 9 ? UNP P21964 ? ? 'expression tag' -2 9 1 6I3C TYR A 10 ? UNP P21964 ? ? 'expression tag' -1 10 1 6I3C PHE A 11 ? UNP P21964 ? ? 'expression tag' 0 11 1 6I3C GLN A 12 ? UNP P21964 ? ? 'expression tag' 1 12 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DNC non-polymer . 3,5-DINITROCATECHOL ? 'C6 H4 N2 O6' 200.106 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SAM non-polymer . S-ADENOSYLMETHIONINE ? 'C15 H22 N6 O5 S' 398.437 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6I3C _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.14 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 42.61 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.4 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;0.2M 1,6-Hexanediol; 0.2M 1-Butanol; 0.2M 1,2-Propanediol; 0.2M 2-Propanol; 0.2M 1,4-Butanediol; 0.2M 1,3-Propanediol), 0.1M Imidazole; MES monohydrate (acid) pH 6.5, 50% v/v pre-cipitant mix (25% v/v MPD; 25% PEG 1000; 25% PEG 3350) Morpheus condition D4 ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 S 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-09-10 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9282 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I04-1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9282 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I04-1 _diffrn_source.pdbx_synchrotron_site Diamond # _reflns.B_iso_Wilson_estimate 10.33 _reflns.entry_id 6I3C _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.336 _reflns.d_resolution_low 39.13 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 49463 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.5 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.2 _reflns.pdbx_Rmerge_I_obs 0.081 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 8.25 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.097 _reflns.pdbx_Rpim_I_all 0.053 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.994 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.336 _reflns_shell.d_res_low 1.384 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.06 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 4891 _reflns_shell.percent_possible_all 99.15 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.36 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 2.5 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 0.45 _reflns_shell.pdbx_Rpim_I_all 0.27 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.824 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6I3C _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.336 _refine.ls_d_res_low 39.13 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 49426 _refine.ls_number_reflns_R_free 2468 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.50 _refine.ls_percent_reflns_R_free 4.99 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1355 _refine.ls_R_factor_R_free 0.1702 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1337 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.37 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model inhouse _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 16.73 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.11 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1670 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 42 _refine_hist.number_atoms_solvent 208 _refine_hist.number_atoms_total 1920 _refine_hist.d_res_high 1.336 _refine_hist.d_res_low 39.13 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.018 ? 1816 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.270 ? 2475 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 6.219 ? 1056 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.108 ? 278 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.008 ? 323 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.3362 1.3619 . . 122 2617 99.00 . . . 0.2503 . 0.1878 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.3619 1.3897 . . 113 2615 99.00 . . . 0.2377 . 0.1770 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.3897 1.4199 . . 137 2579 99.00 . . . 0.2075 . 0.1628 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.4199 1.4530 . . 125 2616 99.00 . . . 0.2147 . 0.1480 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.4530 1.4893 . . 122 2598 99.00 . . . 0.2070 . 0.1385 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.4893 1.5296 . . 145 2599 99.00 . . . 0.1824 . 0.1266 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.5296 1.5746 . . 134 2596 99.00 . . . 0.1515 . 0.1137 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.5746 1.6254 . . 127 2612 99.00 . . . 0.1597 . 0.1110 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.6254 1.6835 . . 133 2604 100.00 . . . 0.1389 . 0.1115 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.6835 1.7509 . . 141 2604 100.00 . . . 0.1437 . 0.1143 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.7509 1.8306 . . 163 2572 100.00 . . . 0.1603 . 0.1226 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.8306 1.9271 . . 146 2609 100.00 . . . 0.1759 . 0.1156 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.9271 2.0478 . . 119 2634 100.00 . . . 0.1841 . 0.1191 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.0478 2.2059 . . 159 2585 100.00 . . . 0.1670 . 0.1235 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.2059 2.4279 . . 136 2636 100.00 . . . 0.1717 . 0.1310 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.4279 2.7792 . . 155 2598 100.00 . . . 0.1652 . 0.1367 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.7792 3.5012 . . 176 2583 99.00 . . . 0.1755 . 0.1456 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.5012 41.2799 . . 115 2701 99.00 . . . 0.1512 . 0.1425 . . . . . . . . . . # _struct.entry_id 6I3C _struct.title 'Crystal structure of Human soluble catechol O-methyltransferase in complex with 3,5-dinitrocatechol and S-adensoyl-L-methionine' _struct.pdbx_descriptor 'Catechol O-methyltransferase (E.C.2.1.1.6)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6I3C _struct_keywords.text 'Enzyme, S-adenosyl-L-methionine, Catechol O-methyltransferase, transferase' _struct_keywords.pdbx_keywords TRANSFERASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 15 ? ALA A 28 ? THR A 4 ALA A 17 1 ? 14 HELX_P HELX_P2 AA2 ASN A 32 ? LYS A 47 ? ASN A 21 LYS A 36 1 ? 16 HELX_P HELX_P3 AA3 VAL A 53 ? GLN A 69 ? VAL A 42 GLN A 58 1 ? 17 HELX_P HELX_P4 AA4 GLY A 81 ? ARG A 89 ? GLY A 70 ARG A 78 1 ? 9 HELX_P HELX_P5 AA5 ASN A 103 ? GLY A 118 ? ASN A 92 GLY A 107 1 ? 16 HELX_P HELX_P6 AA6 VAL A 119 ? ASP A 121 ? VAL A 108 ASP A 110 5 ? 3 HELX_P HELX_P7 AA7 ALA A 129 ? ILE A 134 ? ALA A 118 ILE A 123 1 ? 6 HELX_P HELX_P8 AA8 GLN A 136 ? ASP A 142 ? GLN A 125 ASP A 131 1 ? 7 HELX_P HELX_P9 AA9 TRP A 154 ? ASP A 156 ? TRP A 143 ASP A 145 5 ? 3 HELX_P HELX_P10 AB1 ARG A 157 ? CYS A 168 ? ARG A 146 CYS A 157 1 ? 12 HELX_P HELX_P11 AB2 ALA A 187 ? SER A 197 ? ALA A 176 SER A 186 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? A ASP 152 OD1 ? ? ? 1_555 B MG . MG ? ? A ASP 141 A MG 301 1_555 ? ? ? ? ? ? ? 2.118 ? metalc2 metalc ? ? A ASP 180 OD2 ? ? ? 1_555 B MG . MG ? ? A ASP 169 A MG 301 1_555 ? ? ? ? ? ? ? 2.081 ? metalc3 metalc ? ? A ASN 181 OD1 ? ? ? 1_555 B MG . MG ? ? A ASN 170 A MG 301 1_555 ? ? ? ? ? ? ? 2.154 ? metalc4 metalc ? ? B MG . MG ? ? ? 1_555 D DNC . O1 ? ? A MG 301 A DNC 303 1_555 ? ? ? ? ? ? ? 2.112 ? metalc5 metalc ? ? B MG . MG ? ? ? 1_555 D DNC . O2 ? ? A MG 301 A DNC 303 1_555 ? ? ? ? ? ? ? 2.146 ? metalc6 metalc ? ? B MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 301 A HOH 423 1_555 ? ? ? ? ? ? ? 2.068 ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id CYS _struct_mon_prot_cis.label_seq_id 184 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id CYS _struct_mon_prot_cis.auth_seq_id 173 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 185 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 174 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 1.38 # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 7 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 123 ? VAL A 127 ? VAL A 112 VAL A 116 AA1 2 ARG A 96 ? GLU A 101 ? ARG A 85 GLU A 90 AA1 3 VAL A 72 ? LEU A 76 ? VAL A 61 LEU A 65 AA1 4 MET A 148 ? LEU A 151 ? MET A 137 LEU A 140 AA1 5 VAL A 176 ? ALA A 179 ? VAL A 165 ALA A 168 AA1 6 VAL A 215 ? TYR A 223 ? VAL A 204 TYR A 212 AA1 7 PHE A 200 ? PHE A 208 ? PHE A 189 PHE A 197 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O VAL A 126 ? O VAL A 115 N THR A 99 ? N THR A 88 AA1 2 3 O ILE A 98 ? O ILE A 87 N GLU A 75 ? N GLU A 64 AA1 3 4 N LEU A 74 ? N LEU A 63 O PHE A 150 ? O PHE A 139 AA1 4 5 N VAL A 149 ? N VAL A 138 O LEU A 178 ? O LEU A 167 AA1 5 6 N LEU A 177 ? N LEU A 166 O ALA A 221 ? O ALA A 210 AA1 6 7 O ASP A 216 ? O ASP A 205 N SER A 207 ? N SER A 196 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 301 ? 5 'binding site for residue MG A 301' AC2 Software A SAM 302 ? 17 'binding site for residue SAM A 302' AC3 Software A DNC 303 ? 14 'binding site for residue DNC A 303' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ASP A 152 ? ASP A 141 . ? 1_555 ? 2 AC1 5 ASP A 180 ? ASP A 169 . ? 1_555 ? 3 AC1 5 ASN A 181 ? ASN A 170 . ? 1_555 ? 4 AC1 5 DNC D . ? DNC A 303 . ? 1_555 ? 5 AC1 5 HOH E . ? HOH A 423 . ? 1_555 ? 6 AC2 17 MET A 51 ? MET A 40 . ? 1_555 ? 7 AC2 17 VAL A 53 ? VAL A 42 . ? 1_555 ? 8 AC2 17 GLY A 77 ? GLY A 66 . ? 1_555 ? 9 AC2 17 ALA A 78 ? ALA A 67 . ? 1_555 ? 10 AC2 17 TYR A 79 ? TYR A 68 . ? 1_555 ? 11 AC2 17 TYR A 82 ? TYR A 71 . ? 1_555 ? 12 AC2 17 SER A 83 ? SER A 72 . ? 1_555 ? 13 AC2 17 GLU A 101 ? GLU A 90 . ? 1_555 ? 14 AC2 17 ILE A 102 ? ILE A 91 . ? 1_555 ? 15 AC2 17 SER A 130 ? SER A 119 . ? 1_555 ? 16 AC2 17 GLN A 131 ? GLN A 120 . ? 1_555 ? 17 AC2 17 ASP A 152 ? ASP A 141 . ? 1_555 ? 18 AC2 17 HIS A 153 ? HIS A 142 . ? 1_555 ? 19 AC2 17 TRP A 154 ? TRP A 143 . ? 1_555 ? 20 AC2 17 DNC D . ? DNC A 303 . ? 1_555 ? 21 AC2 17 HOH E . ? HOH A 436 . ? 1_555 ? 22 AC2 17 HOH E . ? HOH A 510 . ? 1_555 ? 23 AC3 14 TRP A 49 ? TRP A 38 . ? 1_555 ? 24 AC3 14 ASP A 152 ? ASP A 141 . ? 1_555 ? 25 AC3 14 HIS A 153 ? HIS A 142 . ? 1_555 ? 26 AC3 14 TRP A 154 ? TRP A 143 . ? 1_555 ? 27 AC3 14 LYS A 155 ? LYS A 144 . ? 1_555 ? 28 AC3 14 ASP A 180 ? ASP A 169 . ? 1_555 ? 29 AC3 14 ASN A 181 ? ASN A 170 . ? 1_555 ? 30 AC3 14 PRO A 185 ? PRO A 174 . ? 1_555 ? 31 AC3 14 LEU A 209 ? LEU A 198 . ? 1_555 ? 32 AC3 14 GLU A 210 ? GLU A 199 . ? 1_555 ? 33 AC3 14 MG B . ? MG A 301 . ? 1_555 ? 34 AC3 14 SAM C . ? SAM A 302 . ? 1_555 ? 35 AC3 14 HOH E . ? HOH A 423 . ? 1_555 ? 36 AC3 14 HOH E . ? HOH A 550 . ? 1_555 ? # _atom_sites.entry_id 6I3C _atom_sites.fract_transf_matrix[1][1] 0.022886 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.011369 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016195 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.024236 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 HIS 1 -10 ? ? ? A . n A 1 2 HIS 2 -9 ? ? ? A . n A 1 3 HIS 3 -8 ? ? ? A . n A 1 4 HIS 4 -7 ? ? ? A . n A 1 5 HIS 5 -6 ? ? ? A . n A 1 6 HIS 6 -5 ? ? ? A . n A 1 7 GLU 7 -4 ? ? ? A . n A 1 8 ASN 8 -3 ? ? ? A . n A 1 9 LEU 9 -2 ? ? ? A . n A 1 10 TYR 10 -1 ? ? ? A . n A 1 11 PHE 11 0 ? ? ? A . n A 1 12 GLN 12 1 ? ? ? A . n A 1 13 GLY 13 2 2 GLY GLY A . n A 1 14 ASP 14 3 3 ASP ASP A . n A 1 15 THR 15 4 4 THR THR A . n A 1 16 LYS 16 5 5 LYS LYS A . n A 1 17 GLU 17 6 6 GLU GLU A . n A 1 18 GLN 18 7 7 GLN GLN A . n A 1 19 ARG 19 8 8 ARG ARG A . n A 1 20 ILE 20 9 9 ILE ILE A . n A 1 21 LEU 21 10 10 LEU LEU A . n A 1 22 ASN 22 11 11 ASN ASN A . n A 1 23 HIS 23 12 12 HIS HIS A . n A 1 24 VAL 24 13 13 VAL VAL A . n A 1 25 LEU 25 14 14 LEU LEU A . n A 1 26 GLN 26 15 15 GLN GLN A . n A 1 27 HIS 27 16 16 HIS HIS A . n A 1 28 ALA 28 17 17 ALA ALA A . n A 1 29 GLU 29 18 18 GLU GLU A . n A 1 30 PRO 30 19 19 PRO PRO A . n A 1 31 GLY 31 20 20 GLY GLY A . n A 1 32 ASN 32 21 21 ASN ASN A . n A 1 33 ALA 33 22 22 ALA ALA A . n A 1 34 GLN 34 23 23 GLN GLN A . n A 1 35 SER 35 24 24 SER SER A . n A 1 36 VAL 36 25 25 VAL VAL A . n A 1 37 LEU 37 26 26 LEU LEU A . n A 1 38 GLU 38 27 27 GLU GLU A . n A 1 39 ALA 39 28 28 ALA ALA A . n A 1 40 ILE 40 29 29 ILE ILE A . n A 1 41 ASP 41 30 30 ASP ASP A . n A 1 42 THR 42 31 31 THR THR A . n A 1 43 TYR 43 32 32 TYR TYR A . n A 1 44 CYS 44 33 33 CYS CYS A . n A 1 45 GLU 45 34 34 GLU GLU A . n A 1 46 GLN 46 35 35 GLN GLN A . n A 1 47 LYS 47 36 36 LYS LYS A . n A 1 48 GLU 48 37 37 GLU GLU A . n A 1 49 TRP 49 38 38 TRP TRP A . n A 1 50 ALA 50 39 39 ALA ALA A . n A 1 51 MET 51 40 40 MET MET A . n A 1 52 ASN 52 41 41 ASN ASN A . n A 1 53 VAL 53 42 42 VAL VAL A . n A 1 54 GLY 54 43 43 GLY GLY A . n A 1 55 ASP 55 44 44 ASP ASP A . n A 1 56 LYS 56 45 45 LYS LYS A . n A 1 57 LYS 57 46 46 LYS LYS A . n A 1 58 GLY 58 47 47 GLY GLY A . n A 1 59 LYS 59 48 48 LYS LYS A . n A 1 60 ILE 60 49 49 ILE ILE A . n A 1 61 VAL 61 50 50 VAL VAL A . n A 1 62 ASP 62 51 51 ASP ASP A . n A 1 63 ALA 63 52 52 ALA ALA A . n A 1 64 VAL 64 53 53 VAL VAL A . n A 1 65 ILE 65 54 54 ILE ILE A . n A 1 66 GLN 66 55 55 GLN GLN A . n A 1 67 GLU 67 56 56 GLU GLU A . n A 1 68 HIS 68 57 57 HIS HIS A . n A 1 69 GLN 69 58 58 GLN GLN A . n A 1 70 PRO 70 59 59 PRO PRO A . n A 1 71 SER 71 60 60 SER SER A . n A 1 72 VAL 72 61 61 VAL VAL A . n A 1 73 LEU 73 62 62 LEU LEU A . n A 1 74 LEU 74 63 63 LEU LEU A . n A 1 75 GLU 75 64 64 GLU GLU A . n A 1 76 LEU 76 65 65 LEU LEU A . n A 1 77 GLY 77 66 66 GLY GLY A . n A 1 78 ALA 78 67 67 ALA ALA A . n A 1 79 TYR 79 68 68 TYR TYR A . n A 1 80 CYS 80 69 69 CYS CYS A . n A 1 81 GLY 81 70 70 GLY GLY A . n A 1 82 TYR 82 71 71 TYR TYR A . n A 1 83 SER 83 72 72 SER SER A . n A 1 84 ALA 84 73 73 ALA ALA A . n A 1 85 VAL 85 74 74 VAL VAL A . n A 1 86 ARG 86 75 75 ARG ARG A . n A 1 87 MET 87 76 76 MET MET A . n A 1 88 ALA 88 77 77 ALA ALA A . n A 1 89 ARG 89 78 78 ARG ARG A . n A 1 90 LEU 90 79 79 LEU LEU A . n A 1 91 LEU 91 80 80 LEU LEU A . n A 1 92 SER 92 81 81 SER SER A . n A 1 93 PRO 93 82 82 PRO PRO A . n A 1 94 GLY 94 83 83 GLY GLY A . n A 1 95 ALA 95 84 84 ALA ALA A . n A 1 96 ARG 96 85 85 ARG ARG A . n A 1 97 LEU 97 86 86 LEU LEU A . n A 1 98 ILE 98 87 87 ILE ILE A . n A 1 99 THR 99 88 88 THR THR A . n A 1 100 ILE 100 89 89 ILE ILE A . n A 1 101 GLU 101 90 90 GLU GLU A . n A 1 102 ILE 102 91 91 ILE ILE A . n A 1 103 ASN 103 92 92 ASN ASN A . n A 1 104 PRO 104 93 93 PRO PRO A . n A 1 105 ASP 105 94 94 ASP ASP A . n A 1 106 CYS 106 95 95 CYS CYS A . n A 1 107 ALA 107 96 96 ALA ALA A . n A 1 108 ALA 108 97 97 ALA ALA A . n A 1 109 ILE 109 98 98 ILE ILE A . n A 1 110 THR 110 99 99 THR THR A . n A 1 111 GLN 111 100 100 GLN GLN A . n A 1 112 ARG 112 101 101 ARG ARG A . n A 1 113 MET 113 102 102 MET MET A . n A 1 114 VAL 114 103 103 VAL VAL A . n A 1 115 ASP 115 104 104 ASP ASP A . n A 1 116 PHE 116 105 105 PHE PHE A . n A 1 117 ALA 117 106 106 ALA ALA A . n A 1 118 GLY 118 107 107 GLY GLY A . n A 1 119 VAL 119 108 108 VAL VAL A . n A 1 120 LYS 120 109 109 LYS LYS A . n A 1 121 ASP 121 110 110 ASP ASP A . n A 1 122 LYS 122 111 111 LYS LYS A . n A 1 123 VAL 123 112 112 VAL VAL A . n A 1 124 THR 124 113 113 THR THR A . n A 1 125 LEU 125 114 114 LEU LEU A . n A 1 126 VAL 126 115 115 VAL VAL A . n A 1 127 VAL 127 116 116 VAL VAL A . n A 1 128 GLY 128 117 117 GLY GLY A . n A 1 129 ALA 129 118 118 ALA ALA A . n A 1 130 SER 130 119 119 SER SER A . n A 1 131 GLN 131 120 120 GLN GLN A . n A 1 132 ASP 132 121 121 ASP ASP A . n A 1 133 ILE 133 122 122 ILE ILE A . n A 1 134 ILE 134 123 123 ILE ILE A . n A 1 135 PRO 135 124 124 PRO PRO A . n A 1 136 GLN 136 125 125 GLN GLN A . n A 1 137 LEU 137 126 126 LEU LEU A . n A 1 138 LYS 138 127 127 LYS LYS A . n A 1 139 LYS 139 128 128 LYS LYS A . n A 1 140 LYS 140 129 129 LYS LYS A . n A 1 141 TYR 141 130 130 TYR TYR A . n A 1 142 ASP 142 131 131 ASP ASP A . n A 1 143 VAL 143 132 132 VAL VAL A . n A 1 144 ASP 144 133 133 ASP ASP A . n A 1 145 THR 145 134 134 THR THR A . n A 1 146 LEU 146 135 135 LEU LEU A . n A 1 147 ASP 147 136 136 ASP ASP A . n A 1 148 MET 148 137 137 MET MET A . n A 1 149 VAL 149 138 138 VAL VAL A . n A 1 150 PHE 150 139 139 PHE PHE A . n A 1 151 LEU 151 140 140 LEU LEU A . n A 1 152 ASP 152 141 141 ASP ASP A . n A 1 153 HIS 153 142 142 HIS HIS A . n A 1 154 TRP 154 143 143 TRP TRP A . n A 1 155 LYS 155 144 144 LYS LYS A . n A 1 156 ASP 156 145 145 ASP ASP A . n A 1 157 ARG 157 146 146 ARG ARG A . n A 1 158 TYR 158 147 147 TYR TYR A . n A 1 159 LEU 159 148 148 LEU LEU A . n A 1 160 PRO 160 149 149 PRO PRO A . n A 1 161 ASP 161 150 150 ASP ASP A . n A 1 162 THR 162 151 151 THR THR A . n A 1 163 LEU 163 152 152 LEU LEU A . n A 1 164 LEU 164 153 153 LEU LEU A . n A 1 165 LEU 165 154 154 LEU LEU A . n A 1 166 GLU 166 155 155 GLU GLU A . n A 1 167 GLU 167 156 156 GLU GLU A . n A 1 168 CYS 168 157 157 CYS CYS A . n A 1 169 GLY 169 158 158 GLY GLY A . n A 1 170 LEU 170 159 159 LEU LEU A . n A 1 171 LEU 171 160 160 LEU LEU A . n A 1 172 ARG 172 161 161 ARG ARG A . n A 1 173 LYS 173 162 162 LYS LYS A . n A 1 174 GLY 174 163 163 GLY GLY A . n A 1 175 THR 175 164 164 THR THR A . n A 1 176 VAL 176 165 165 VAL VAL A . n A 1 177 LEU 177 166 166 LEU LEU A . n A 1 178 LEU 178 167 167 LEU LEU A . n A 1 179 ALA 179 168 168 ALA ALA A . n A 1 180 ASP 180 169 169 ASP ASP A . n A 1 181 ASN 181 170 170 ASN ASN A . n A 1 182 VAL 182 171 171 VAL VAL A . n A 1 183 ILE 183 172 172 ILE ILE A . n A 1 184 CYS 184 173 173 CYS CYS A . n A 1 185 PRO 185 174 174 PRO PRO A . n A 1 186 GLY 186 175 175 GLY GLY A . n A 1 187 ALA 187 176 176 ALA ALA A . n A 1 188 PRO 188 177 177 PRO PRO A . n A 1 189 ASP 189 178 178 ASP ASP A . n A 1 190 PHE 190 179 179 PHE PHE A . n A 1 191 LEU 191 180 180 LEU LEU A . n A 1 192 ALA 192 181 181 ALA ALA A . n A 1 193 HIS 193 182 182 HIS HIS A . n A 1 194 VAL 194 183 183 VAL VAL A . n A 1 195 ARG 195 184 184 ARG ARG A . n A 1 196 GLY 196 185 185 GLY GLY A . n A 1 197 SER 197 186 186 SER SER A . n A 1 198 SER 198 187 187 SER SER A . n A 1 199 CYS 199 188 188 CYS CYS A . n A 1 200 PHE 200 189 189 PHE PHE A . n A 1 201 GLU 201 190 190 GLU GLU A . n A 1 202 CYS 202 191 191 CYS CYS A . n A 1 203 THR 203 192 192 THR THR A . n A 1 204 HIS 204 193 193 HIS HIS A . n A 1 205 TYR 205 194 194 TYR TYR A . n A 1 206 GLN 206 195 195 GLN GLN A . n A 1 207 SER 207 196 196 SER SER A . n A 1 208 PHE 208 197 197 PHE PHE A . n A 1 209 LEU 209 198 198 LEU LEU A . n A 1 210 GLU 210 199 199 GLU GLU A . n A 1 211 TYR 211 200 200 TYR TYR A . n A 1 212 ARG 212 201 201 ARG ARG A . n A 1 213 GLU 213 202 202 GLU GLU A . n A 1 214 VAL 214 203 203 VAL VAL A . n A 1 215 VAL 215 204 204 VAL VAL A . n A 1 216 ASP 216 205 205 ASP ASP A . n A 1 217 GLY 217 206 206 GLY GLY A . n A 1 218 LEU 218 207 207 LEU LEU A . n A 1 219 GLU 219 208 208 GLU GLU A . n A 1 220 LYS 220 209 209 LYS LYS A . n A 1 221 ALA 221 210 210 ALA ALA A . n A 1 222 ILE 222 211 211 ILE ILE A . n A 1 223 TYR 223 212 212 TYR TYR A . n A 1 224 LYS 224 213 213 LYS LYS A . n A 1 225 GLY 225 214 214 GLY GLY A . n A 1 226 PRO 226 215 215 PRO PRO A . n A 1 227 GLY 227 216 ? ? ? A . n A 1 228 SER 228 217 ? ? ? A . n A 1 229 GLU 229 218 ? ? ? A . n A 1 230 ALA 230 219 ? ? ? A . n A 1 231 GLY 231 220 ? ? ? A . n A 1 232 PRO 232 221 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 301 216 MG MG A . C 3 SAM 1 302 217 SAM SAM A . D 4 DNC 1 303 218 DNC DNC A . E 5 HOH 1 401 249 HOH HOH A . E 5 HOH 2 402 421 HOH HOH A . E 5 HOH 3 403 377 HOH HOH A . E 5 HOH 4 404 333 HOH HOH A . E 5 HOH 5 405 420 HOH HOH A . E 5 HOH 6 406 408 HOH HOH A . E 5 HOH 7 407 416 HOH HOH A . E 5 HOH 8 408 289 HOH HOH A . E 5 HOH 9 409 398 HOH HOH A . E 5 HOH 10 410 350 HOH HOH A . E 5 HOH 11 411 330 HOH HOH A . E 5 HOH 12 412 367 HOH HOH A . E 5 HOH 13 413 388 HOH HOH A . E 5 HOH 14 414 235 HOH HOH A . E 5 HOH 15 415 374 HOH HOH A . E 5 HOH 16 416 300 HOH HOH A . E 5 HOH 17 417 426 HOH HOH A . E 5 HOH 18 418 417 HOH HOH A . E 5 HOH 19 419 346 HOH HOH A . E 5 HOH 20 420 401 HOH HOH A . E 5 HOH 21 421 303 HOH HOH A . E 5 HOH 22 422 253 HOH HOH A . E 5 HOH 23 423 219 HOH HOH A . E 5 HOH 24 424 314 HOH HOH A . E 5 HOH 25 425 392 HOH HOH A . E 5 HOH 26 426 306 HOH HOH A . E 5 HOH 27 427 278 HOH HOH A . E 5 HOH 28 428 403 HOH HOH A . E 5 HOH 29 429 424 HOH HOH A . E 5 HOH 30 430 378 HOH HOH A . E 5 HOH 31 431 310 HOH HOH A . E 5 HOH 32 432 325 HOH HOH A . E 5 HOH 33 433 344 HOH HOH A . E 5 HOH 34 434 415 HOH HOH A . E 5 HOH 35 435 368 HOH HOH A . E 5 HOH 36 436 220 HOH HOH A . E 5 HOH 37 437 307 HOH HOH A . E 5 HOH 38 438 304 HOH HOH A . E 5 HOH 39 439 227 HOH HOH A . E 5 HOH 40 440 277 HOH HOH A . E 5 HOH 41 441 302 HOH HOH A . E 5 HOH 42 442 371 HOH HOH A . E 5 HOH 43 443 283 HOH HOH A . E 5 HOH 44 444 311 HOH HOH A . E 5 HOH 45 445 328 HOH HOH A . E 5 HOH 46 446 357 HOH HOH A . E 5 HOH 47 447 299 HOH HOH A . E 5 HOH 48 448 243 HOH HOH A . E 5 HOH 49 449 354 HOH HOH A . E 5 HOH 50 450 257 HOH HOH A . E 5 HOH 51 451 265 HOH HOH A . E 5 HOH 52 452 406 HOH HOH A . E 5 HOH 53 453 237 HOH HOH A . E 5 HOH 54 454 343 HOH HOH A . E 5 HOH 55 455 268 HOH HOH A . E 5 HOH 56 456 242 HOH HOH A . E 5 HOH 57 457 290 HOH HOH A . E 5 HOH 58 458 318 HOH HOH A . E 5 HOH 59 459 263 HOH HOH A . E 5 HOH 60 460 281 HOH HOH A . E 5 HOH 61 461 251 HOH HOH A . E 5 HOH 62 462 397 HOH HOH A . E 5 HOH 63 463 222 HOH HOH A . E 5 HOH 64 464 261 HOH HOH A . E 5 HOH 65 465 223 HOH HOH A . E 5 HOH 66 466 246 HOH HOH A . E 5 HOH 67 467 274 HOH HOH A . E 5 HOH 68 468 254 HOH HOH A . E 5 HOH 69 469 264 HOH HOH A . E 5 HOH 70 470 339 HOH HOH A . E 5 HOH 71 471 390 HOH HOH A . E 5 HOH 72 472 272 HOH HOH A . E 5 HOH 73 473 228 HOH HOH A . E 5 HOH 74 474 232 HOH HOH A . E 5 HOH 75 475 221 HOH HOH A . E 5 HOH 76 476 312 HOH HOH A . E 5 HOH 77 477 323 HOH HOH A . E 5 HOH 78 478 285 HOH HOH A . E 5 HOH 79 479 372 HOH HOH A . E 5 HOH 80 480 229 HOH HOH A . E 5 HOH 81 481 241 HOH HOH A . E 5 HOH 82 482 315 HOH HOH A . E 5 HOH 83 483 248 HOH HOH A . E 5 HOH 84 484 238 HOH HOH A . E 5 HOH 85 485 224 HOH HOH A . E 5 HOH 86 486 252 HOH HOH A . E 5 HOH 87 487 386 HOH HOH A . E 5 HOH 88 488 309 HOH HOH A . E 5 HOH 89 489 313 HOH HOH A . E 5 HOH 90 490 255 HOH HOH A . E 5 HOH 91 491 288 HOH HOH A . E 5 HOH 92 492 256 HOH HOH A . E 5 HOH 93 493 287 HOH HOH A . E 5 HOH 94 494 280 HOH HOH A . E 5 HOH 95 495 395 HOH HOH A . E 5 HOH 96 496 294 HOH HOH A . E 5 HOH 97 497 394 HOH HOH A . E 5 HOH 98 498 273 HOH HOH A . E 5 HOH 99 499 364 HOH HOH A . E 5 HOH 100 500 411 HOH HOH A . E 5 HOH 101 501 324 HOH HOH A . E 5 HOH 102 502 270 HOH HOH A . E 5 HOH 103 503 321 HOH HOH A . E 5 HOH 104 504 352 HOH HOH A . E 5 HOH 105 505 267 HOH HOH A . E 5 HOH 106 506 297 HOH HOH A . E 5 HOH 107 507 383 HOH HOH A . E 5 HOH 108 508 271 HOH HOH A . E 5 HOH 109 509 291 HOH HOH A . E 5 HOH 110 510 226 HOH HOH A . E 5 HOH 111 511 305 HOH HOH A . E 5 HOH 112 512 320 HOH HOH A . E 5 HOH 113 513 393 HOH HOH A . E 5 HOH 114 514 245 HOH HOH A . E 5 HOH 115 515 250 HOH HOH A . E 5 HOH 116 516 231 HOH HOH A . E 5 HOH 117 517 275 HOH HOH A . E 5 HOH 118 518 349 HOH HOH A . E 5 HOH 119 519 247 HOH HOH A . E 5 HOH 120 520 262 HOH HOH A . E 5 HOH 121 521 348 HOH HOH A . E 5 HOH 122 522 319 HOH HOH A . E 5 HOH 123 523 230 HOH HOH A . E 5 HOH 124 524 240 HOH HOH A . E 5 HOH 125 525 347 HOH HOH A . E 5 HOH 126 526 381 HOH HOH A . E 5 HOH 127 527 375 HOH HOH A . E 5 HOH 128 528 351 HOH HOH A . E 5 HOH 129 529 225 HOH HOH A . E 5 HOH 130 530 337 HOH HOH A . E 5 HOH 131 531 236 HOH HOH A . E 5 HOH 132 532 301 HOH HOH A . E 5 HOH 133 533 370 HOH HOH A . E 5 HOH 134 534 234 HOH HOH A . E 5 HOH 135 535 362 HOH HOH A . E 5 HOH 136 536 338 HOH HOH A . E 5 HOH 137 537 341 HOH HOH A . E 5 HOH 138 538 292 HOH HOH A . E 5 HOH 139 539 258 HOH HOH A . E 5 HOH 140 540 239 HOH HOH A . E 5 HOH 141 541 389 HOH HOH A . E 5 HOH 142 542 387 HOH HOH A . E 5 HOH 143 543 276 HOH HOH A . E 5 HOH 144 544 266 HOH HOH A . E 5 HOH 145 545 282 HOH HOH A . E 5 HOH 146 546 345 HOH HOH A . E 5 HOH 147 547 295 HOH HOH A . E 5 HOH 148 548 244 HOH HOH A . E 5 HOH 149 549 284 HOH HOH A . E 5 HOH 150 550 259 HOH HOH A . E 5 HOH 151 551 332 HOH HOH A . E 5 HOH 152 552 260 HOH HOH A . E 5 HOH 153 553 336 HOH HOH A . E 5 HOH 154 554 334 HOH HOH A . E 5 HOH 155 555 379 HOH HOH A . E 5 HOH 156 556 399 HOH HOH A . E 5 HOH 157 557 317 HOH HOH A . E 5 HOH 158 558 340 HOH HOH A . E 5 HOH 159 559 409 HOH HOH A . E 5 HOH 160 560 400 HOH HOH A . E 5 HOH 161 561 373 HOH HOH A . E 5 HOH 162 562 404 HOH HOH A . E 5 HOH 163 563 335 HOH HOH A . E 5 HOH 164 564 407 HOH HOH A . E 5 HOH 165 565 385 HOH HOH A . E 5 HOH 166 566 410 HOH HOH A . E 5 HOH 167 567 360 HOH HOH A . E 5 HOH 168 568 402 HOH HOH A . E 5 HOH 169 569 293 HOH HOH A . E 5 HOH 170 570 331 HOH HOH A . E 5 HOH 171 571 355 HOH HOH A . E 5 HOH 172 572 412 HOH HOH A . E 5 HOH 173 573 356 HOH HOH A . E 5 HOH 174 574 423 HOH HOH A . E 5 HOH 175 575 296 HOH HOH A . E 5 HOH 176 576 279 HOH HOH A . E 5 HOH 177 577 425 HOH HOH A . E 5 HOH 178 578 382 HOH HOH A . E 5 HOH 179 579 327 HOH HOH A . E 5 HOH 180 580 418 HOH HOH A . E 5 HOH 181 581 342 HOH HOH A . E 5 HOH 182 582 353 HOH HOH A . E 5 HOH 183 583 384 HOH HOH A . E 5 HOH 184 584 413 HOH HOH A . E 5 HOH 185 585 269 HOH HOH A . E 5 HOH 186 586 391 HOH HOH A . E 5 HOH 187 587 396 HOH HOH A . E 5 HOH 188 588 326 HOH HOH A . E 5 HOH 189 589 422 HOH HOH A . E 5 HOH 190 590 316 HOH HOH A . E 5 HOH 191 591 365 HOH HOH A . E 5 HOH 192 592 369 HOH HOH A . E 5 HOH 193 593 419 HOH HOH A . E 5 HOH 194 594 376 HOH HOH A . E 5 HOH 195 595 298 HOH HOH A . E 5 HOH 196 596 380 HOH HOH A . E 5 HOH 197 597 359 HOH HOH A . E 5 HOH 198 598 363 HOH HOH A . E 5 HOH 199 599 329 HOH HOH A . E 5 HOH 200 600 366 HOH HOH A . E 5 HOH 201 601 358 HOH HOH A . E 5 HOH 202 602 286 HOH HOH A . E 5 HOH 203 603 233 HOH HOH A . E 5 HOH 204 604 361 HOH HOH A . E 5 HOH 205 605 308 HOH HOH A . E 5 HOH 206 606 414 HOH HOH A . E 5 HOH 207 607 405 HOH HOH A . E 5 HOH 208 608 322 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 520 ? 1 MORE -9 ? 1 'SSA (A^2)' 9390 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 152 ? A ASP 141 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 OD2 ? A ASP 180 ? A ASP 169 ? 1_555 94.3 ? 2 OD1 ? A ASP 152 ? A ASP 141 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 OD1 ? A ASN 181 ? A ASN 170 ? 1_555 92.2 ? 3 OD2 ? A ASP 180 ? A ASP 169 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 OD1 ? A ASN 181 ? A ASN 170 ? 1_555 83.6 ? 4 OD1 ? A ASP 152 ? A ASP 141 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O1 ? D DNC . ? A DNC 303 ? 1_555 163.0 ? 5 OD2 ? A ASP 180 ? A ASP 169 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O1 ? D DNC . ? A DNC 303 ? 1_555 102.7 ? 6 OD1 ? A ASN 181 ? A ASN 170 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O1 ? D DNC . ? A DNC 303 ? 1_555 89.6 ? 7 OD1 ? A ASP 152 ? A ASP 141 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O2 ? D DNC . ? A DNC 303 ? 1_555 87.0 ? 8 OD2 ? A ASP 180 ? A ASP 169 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O2 ? D DNC . ? A DNC 303 ? 1_555 164.3 ? 9 OD1 ? A ASN 181 ? A ASN 170 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O2 ? D DNC . ? A DNC 303 ? 1_555 80.6 ? 10 O1 ? D DNC . ? A DNC 303 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O2 ? D DNC . ? A DNC 303 ? 1_555 76.6 ? 11 OD1 ? A ASP 152 ? A ASP 141 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? E HOH . ? A HOH 423 ? 1_555 93.2 ? 12 OD2 ? A ASP 180 ? A ASP 169 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? E HOH . ? A HOH 423 ? 1_555 89.2 ? 13 OD1 ? A ASN 181 ? A ASN 170 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? E HOH . ? A HOH 423 ? 1_555 171.3 ? 14 O1 ? D DNC . ? A DNC 303 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? E HOH . ? A HOH 423 ? 1_555 87.1 ? 15 O2 ? D DNC . ? A DNC 303 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? E HOH . ? A HOH 423 ? 1_555 106.4 ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2019-09-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(dev_3304: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? xia2 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? xia2 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OD1 A ASP 178 ? B O A HOH 401 ? ? 1.90 2 1 O A HOH 493 ? ? O A HOH 599 ? ? 1.97 3 1 O A HOH 407 ? ? O A HOH 565 ? ? 2.02 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 MET A 40 ? ? -81.07 42.83 2 1 TYR A 68 ? ? 59.80 -108.36 3 1 ASP A 133 ? A -92.43 -84.57 4 1 ASP A 133 ? B -93.39 -81.66 5 1 ASP A 141 ? ? -157.86 36.55 6 1 HIS A 142 ? ? -99.93 -158.66 7 1 SER A 196 ? ? -153.16 -137.49 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 608 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.19 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A HIS -10 ? A HIS 1 2 1 Y 1 A HIS -9 ? A HIS 2 3 1 Y 1 A HIS -8 ? A HIS 3 4 1 Y 1 A HIS -7 ? A HIS 4 5 1 Y 1 A HIS -6 ? A HIS 5 6 1 Y 1 A HIS -5 ? A HIS 6 7 1 Y 1 A GLU -4 ? A GLU 7 8 1 Y 1 A ASN -3 ? A ASN 8 9 1 Y 1 A LEU -2 ? A LEU 9 10 1 Y 1 A TYR -1 ? A TYR 10 11 1 Y 1 A PHE 0 ? A PHE 11 12 1 Y 1 A GLN 1 ? A GLN 12 13 1 Y 1 A GLY 216 ? A GLY 227 14 1 Y 1 A SER 217 ? A SER 228 15 1 Y 1 A GLU 218 ? A GLU 229 16 1 Y 1 A ALA 219 ? A ALA 230 17 1 Y 1 A GLY 220 ? A GLY 231 18 1 Y 1 A PRO 221 ? A PRO 232 # _pdbx_audit_support.funding_organization 'European Commission' _pdbx_audit_support.country 'United Kingdom' _pdbx_audit_support.grant_number 'PITN-GA-2013-ITN 606831' _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 S-ADENOSYLMETHIONINE SAM 4 3,5-DINITROCATECHOL DNC 5 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #