HEADER CONTRACTILE PROTEIN 09-NOV-18 6I4F TITLE CRYSTAL STRUCTURE OF PLASMODIUM FALCIPARUM ACTIN I (A272W MUTANT) IN TITLE 2 THE MG-K-ATP/ADP STATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACTIN-1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ACTIN I; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: GELSOLIN; COMPND 9 CHAIN: G; COMPND 10 SYNONYM: ACTIN-DEPOLYMERIZING FACTOR,ADF,BREVIN; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM; SOURCE 3 ORGANISM_COMMON: ISOLATE 3D7; SOURCE 4 ORGANISM_TAXID: 36329; SOURCE 5 GENE: PFL2215W; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 10 ORGANISM_COMMON: MOUSE; SOURCE 11 ORGANISM_TAXID: 10090; SOURCE 12 GENE: GSN, GSB; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HYDROLASE, FILAMENTOUS, GLIDEOSOME, CYTOSKELETON, CONTRACTILE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR E.-P.KUMPULA,A.J.LOPEZ,L.TAJEDIN,H.HAN,I.KURSULA REVDAT 2 24-JAN-24 6I4F 1 LINK REVDAT 1 26-JUN-19 6I4F 0 JRNL AUTH E.P.KUMPULA,A.J.LOPEZ,L.TAJEDIN,H.HAN,I.KURSULA JRNL TITL ATOMIC VIEW INTO PLASMODIUM ACTIN POLYMERIZATION, ATP JRNL TITL 2 HYDROLYSIS, AND FRAGMENTATION. JRNL REF PLOS BIOL. V. 17 00315 2019 JRNL REFN ESSN 1545-7885 JRNL PMID 31199804 JRNL DOI 10.1371/JOURNAL.PBIO.3000315 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.18 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.930 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 167756 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.156 REMARK 3 R VALUE (WORKING SET) : 0.156 REMARK 3 FREE R VALUE : 0.192 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.300 REMARK 3 FREE R VALUE TEST SET COUNT : 2175 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.2000 - 3.7800 1.00 10345 129 0.1354 0.1545 REMARK 3 2 3.7800 - 3.0000 1.00 10363 143 0.1399 0.1886 REMARK 3 3 3.0000 - 2.6200 1.00 10338 134 0.1404 0.1776 REMARK 3 4 2.6200 - 2.3800 1.00 10324 138 0.1342 0.1775 REMARK 3 5 2.3800 - 2.2100 1.00 10355 134 0.1355 0.1840 REMARK 3 6 2.2100 - 2.0800 1.00 10378 137 0.1418 0.1740 REMARK 3 7 2.0800 - 1.9800 1.00 10347 140 0.1492 0.2020 REMARK 3 8 1.9800 - 1.8900 1.00 10348 141 0.1711 0.1981 REMARK 3 9 1.8900 - 1.8200 1.00 10366 133 0.1780 0.2420 REMARK 3 10 1.8200 - 1.7500 1.00 10349 140 0.1963 0.2193 REMARK 3 11 1.7500 - 1.7000 1.00 10315 141 0.2231 0.2388 REMARK 3 12 1.7000 - 1.6500 1.00 10368 124 0.2437 0.2692 REMARK 3 13 1.6500 - 1.6100 1.00 10346 142 0.2768 0.3082 REMARK 3 14 1.6100 - 1.5700 1.00 10312 136 0.2795 0.3135 REMARK 3 15 1.5700 - 1.5300 1.00 10345 141 0.2811 0.2765 REMARK 3 16 1.5300 - 1.5000 1.00 10382 122 0.3048 0.3369 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.198 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.006 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.74 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.99 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 4214 REMARK 3 ANGLE : 1.029 5765 REMARK 3 CHIRALITY : 0.058 617 REMARK 3 PLANARITY : 0.007 741 REMARK 3 DIHEDRAL : 11.705 2563 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND RESID 34 THROUGH 74 REMARK 3 ORIGIN FOR THE GROUP (A): 10.3515 22.3691 256.0173 REMARK 3 T TENSOR REMARK 3 T11: 0.5964 T22: 0.3275 REMARK 3 T33: 0.4425 T12: -0.0084 REMARK 3 T13: 0.0281 T23: -0.0822 REMARK 3 L TENSOR REMARK 3 L11: 0.2136 L22: 0.3842 REMARK 3 L33: 0.4509 L12: 0.0283 REMARK 3 L13: 0.0081 L23: -0.4136 REMARK 3 S TENSOR REMARK 3 S11: 0.0939 S12: -0.2206 S13: 0.7521 REMARK 3 S21: 0.5611 S22: -0.0237 S23: 0.2251 REMARK 3 S31: -0.8064 S32: -0.0976 S33: 0.0093 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND RESID 138 THROUGH 337 REMARK 3 ORIGIN FOR THE GROUP (A): 16.3370 15.4820 231.3675 REMARK 3 T TENSOR REMARK 3 T11: 0.1679 T22: 0.1658 REMARK 3 T33: 0.1558 T12: -0.0083 REMARK 3 T13: -0.0203 T23: 0.0002 REMARK 3 L TENSOR REMARK 3 L11: 0.6899 L22: 2.0879 REMARK 3 L33: 0.4482 L12: -0.6324 REMARK 3 L13: -0.0103 L23: -0.4920 REMARK 3 S TENSOR REMARK 3 S11: -0.0178 S12: 0.0273 S13: 0.0843 REMARK 3 S21: -0.0238 S22: 0.0425 S23: 0.0108 REMARK 3 S31: -0.0837 S32: 0.0057 S33: 0.0002 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 5 THROUGH 33 OR RESID 75 REMARK 3 THROUGH 137 OR RESID 339 THROUGH 370) REMARK 3 ORIGIN FOR THE GROUP (A): 13.8227 1.6588 256.9679 REMARK 3 T TENSOR REMARK 3 T11: 0.1621 T22: 0.2609 REMARK 3 T33: 0.1822 T12: 0.0024 REMARK 3 T13: -0.0008 T23: 0.0149 REMARK 3 L TENSOR REMARK 3 L11: 0.9414 L22: 0.6731 REMARK 3 L33: 1.5997 L12: 0.2512 REMARK 3 L13: -0.2669 L23: -0.0499 REMARK 3 S TENSOR REMARK 3 S11: -0.0214 S12: -0.1663 S13: -0.0522 REMARK 3 S21: 0.0426 S22: -0.0044 S23: -0.0464 REMARK 3 S31: 0.0151 S32: 0.2329 S33: 0.0001 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'G' AND RESID 26 THROUGH 149 REMARK 3 ORIGIN FOR THE GROUP (A): 11.0388 -19.0396 233.3058 REMARK 3 T TENSOR REMARK 3 T11: 0.1644 T22: 0.1437 REMARK 3 T33: 0.1864 T12: 0.0078 REMARK 3 T13: -0.0086 T23: 0.0159 REMARK 3 L TENSOR REMARK 3 L11: 1.3983 L22: 1.5066 REMARK 3 L33: 1.4525 L12: 0.3771 REMARK 3 L13: 0.4167 L23: 0.2423 REMARK 3 S TENSOR REMARK 3 S11: 0.0639 S12: -0.0531 S13: -0.2105 REMARK 3 S21: -0.0025 S22: -0.0140 S23: -0.1725 REMARK 3 S31: 0.1528 S32: 0.0423 S33: 0.0196 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6I4F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 09-NOV-18. REMARK 100 THE DEPOSITION ID IS D_1200012789. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-OCT-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.916 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 167763 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 45.180 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.09478 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.7100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : 2.12300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4CBU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.51 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 11% PEG3350, 0.1 M BIS-TRIS PH 5.8, REMARK 280 0.2M K-SCN; STREAK SEEDED; 20% PEG400 USED FOR CRYOPROTECTION, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,-Y,-Z+1/2 REMARK 290 4555 -X+1/2,-Y,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 34.38000 REMARK 290 SMTRY2 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 55.02000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 34.38000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 55.02000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5150 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20160 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -70.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 755 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 GLU A 3 REMARK 465 GLU A 4 REMARK 465 ASP A 5 REMARK 465 ASN A 41 REMARK 465 PRO A 42 REMARK 465 GLY A 43 REMARK 465 ILE A 44 REMARK 465 MET A 45 REMARK 465 VAL A 46 REMARK 465 GLY A 47 REMARK 465 MET A 48 REMARK 465 GLU A 49 REMARK 465 GLU A 50 REMARK 465 LYS A 51 REMARK 465 GLY A 367 REMARK 465 PRO A 368 REMARK 465 SER A 369 REMARK 465 ILE A 370 REMARK 465 VAL A 371 REMARK 465 HIS A 372 REMARK 465 ARG A 373 REMARK 465 LYS A 374 REMARK 465 CYS A 375 REMARK 465 PHE A 376 REMARK 465 GLY G -1 REMARK 465 PRO G 0 REMARK 465 MET G 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HD22 ASN G 33 O HOH G 302 1.48 REMARK 500 O HOH A 533 O HOH A 672 1.53 REMARK 500 HE22 GLN A 122 O HOH A 504 1.56 REMARK 500 HH TYR A 92 O HOH A 508 1.58 REMARK 500 HH22 ARG A 197 O HOH A 514 1.59 REMARK 500 O HOH A 511 O HOH A 782 1.65 REMARK 500 O HOH G 407 O HOH G 413 1.66 REMARK 500 O HOH A 655 O HOH A 750 1.85 REMARK 500 O HOH A 847 O HOH A 862 1.89 REMARK 500 O HOH G 411 O HOH G 431 1.89 REMARK 500 O HOH G 408 O HOH G 413 1.92 REMARK 500 O HOH G 334 O HOH G 387 1.92 REMARK 500 O HOH G 307 O HOH G 335 1.94 REMARK 500 O HOH A 670 O HOH A 765 1.96 REMARK 500 O HOH G 325 O HOH G 345 1.96 REMARK 500 OD2 ASP A 185 O HOH A 501 2.01 REMARK 500 O HOH A 502 O HOH A 718 2.03 REMARK 500 OE2 GLU A 335 O HOH A 502 2.10 REMARK 500 O GLU A 335 O HOH A 503 2.13 REMARK 500 O HOH A 584 O HOH A 806 2.13 REMARK 500 O HOH A 507 O HOH A 851 2.13 REMARK 500 O HOH G 403 O HOH G 415 2.14 REMARK 500 O HOH A 609 O HOH A 787 2.16 REMARK 500 O HOH G 383 O HOH G 407 2.16 REMARK 500 NE2 GLN A 122 O HOH A 504 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH G 404 O HOH G 413 2559 1.72 REMARK 500 OE2 GLU A 101 OG SER A 324 4555 2.11 REMARK 500 O HOH A 787 O HOH A 824 4554 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 182 -154.17 -155.61 REMARK 500 SER A 202 -31.62 -149.14 REMARK 500 ASN A 297 58.40 -146.71 REMARK 500 VAL G 3 -28.82 -141.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 404 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 155 OD1 REMARK 620 2 VAL A 160 O 124.6 REMARK 620 3 ATP A 401 O1G 131.2 61.5 REMARK 620 4 ATP A 401 O2G 97.4 108.2 47.6 REMARK 620 5 HOH A 537 O 101.1 113.5 52.0 11.4 REMARK 620 6 HOH A 600 O 99.3 114.0 123.2 112.2 101.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA G 202 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 168 OE1 REMARK 620 2 ASP G 85 OD1 135.6 REMARK 620 3 ASP G 85 OD2 89.6 46.7 REMARK 620 4 GLY G 90 O 149.0 73.0 114.9 REMARK 620 5 ALA G 92 O 99.4 74.5 86.3 100.8 REMARK 620 6 HOH G 354 O 86.5 81.7 65.7 86.9 151.4 REMARK 620 7 HOH G 377 O 79.3 145.0 163.4 72.3 107.5 101.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 407 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LYS A 292 O REMARK 620 2 LYS A 327 O 120.8 REMARK 620 3 HOH A 838 O 94.2 110.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 403 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ATP A 401 O2G REMARK 620 2 ATP A 401 O1B 68.9 REMARK 620 3 ADP A 402 O2B 76.8 11.1 REMARK 620 4 HOH A 535 O 100.0 167.0 176.6 REMARK 620 5 HOH A 537 O 16.4 83.8 90.5 86.2 REMARK 620 6 HOH A 565 O 83.0 84.5 93.1 87.5 91.1 REMARK 620 7 HOH A 577 O 162.5 95.6 89.1 94.2 178.6 87.6 REMARK 620 8 HOH A 725 O 103.7 103.8 94.7 85.0 93.9 170.7 87.5 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA G 201 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY G 41 O REMARK 620 2 ASP G 42 OD1 76.6 REMARK 620 3 GLU G 73 OE1 73.5 98.7 REMARK 620 4 GLU G 73 OE2 120.9 87.9 52.8 REMARK 620 5 VAL G 121 O 149.8 89.7 135.9 84.6 REMARK 620 6 HOH G 388 O 102.1 174.8 76.1 88.5 93.8 REMARK 620 7 HOH G 395 O 77.8 101.3 139.9 160.9 78.7 83.3 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ATP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BTB A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA G 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA G 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6I4D RELATED DB: PDB REMARK 900 RELATED ID: 6I4E RELATED DB: PDB DBREF 6I4F A 1 376 UNP Q8I4X0 ACT1_PLAF7 1 376 DBREF 6I4F G 1 125 UNP P13020 GELS_MOUSE 1 125 SEQADV 6I4F GLY A -1 UNP Q8I4X0 EXPRESSION TAG SEQADV 6I4F ALA A 0 UNP Q8I4X0 EXPRESSION TAG SEQADV 6I4F TRP A 272 UNP Q8I4X0 ALA 272 ENGINEERED MUTATION SEQADV 6I4F GLY G -1 UNP P13020 EXPRESSION TAG SEQADV 6I4F PRO G 0 UNP P13020 EXPRESSION TAG SEQRES 1 A 378 GLY ALA MET GLY GLU GLU ASP VAL GLN ALA LEU VAL VAL SEQRES 2 A 378 ASP ASN GLY SER GLY ASN VAL LYS ALA GLY VAL ALA GLY SEQRES 3 A 378 ASP ASP ALA PRO ARG SER VAL PHE PRO SER ILE VAL GLY SEQRES 4 A 378 ARG PRO LYS ASN PRO GLY ILE MET VAL GLY MET GLU GLU SEQRES 5 A 378 LYS ASP ALA PHE VAL GLY ASP GLU ALA GLN THR LYS ARG SEQRES 6 A 378 GLY ILE LEU THR LEU LYS TYR PRO ILE GLU HIS GLY ILE SEQRES 7 A 378 VAL THR ASN TRP ASP ASP MET GLU LYS ILE TRP HIS HIS SEQRES 8 A 378 THR PHE TYR ASN GLU LEU ARG ALA ALA PRO GLU GLU HIS SEQRES 9 A 378 PRO VAL LEU LEU THR GLU ALA PRO LEU ASN PRO LYS GLY SEQRES 10 A 378 ASN ARG GLU ARG MET THR GLN ILE MET PHE GLU SER PHE SEQRES 11 A 378 ASN VAL PRO ALA MET TYR VAL ALA ILE GLN ALA VAL LEU SEQRES 12 A 378 SER LEU TYR SER SER GLY ARG THR THR GLY ILE VAL LEU SEQRES 13 A 378 ASP SER GLY ASP GLY VAL SER HIS THR VAL PRO ILE TYR SEQRES 14 A 378 GLU GLY TYR ALA LEU PRO HIS ALA ILE MET ARG LEU ASP SEQRES 15 A 378 LEU ALA GLY ARG ASP LEU THR GLU TYR LEU MET LYS ILE SEQRES 16 A 378 LEU HIS GLU ARG GLY TYR GLY PHE SER THR SER ALA GLU SEQRES 17 A 378 LYS GLU ILE VAL ARG ASP ILE LYS GLU LYS LEU CYS TYR SEQRES 18 A 378 ILE ALA LEU ASN PHE ASP GLU GLU MET LYS THR SER GLU SEQRES 19 A 378 GLN SER SER ASP ILE GLU LYS SER TYR GLU LEU PRO ASP SEQRES 20 A 378 GLY ASN ILE ILE THR VAL GLY ASN GLU ARG PHE ARG CYS SEQRES 21 A 378 PRO GLU ALA LEU PHE GLN PRO SER PHE LEU GLY LYS GLU SEQRES 22 A 378 TRP ALA GLY ILE HIS THR THR THR PHE ASN SER ILE LYS SEQRES 23 A 378 LYS CYS ASP VAL ASP ILE ARG LYS ASP LEU TYR GLY ASN SEQRES 24 A 378 ILE VAL LEU SER GLY GLY THR THR MET TYR GLU GLY ILE SEQRES 25 A 378 GLY GLU ARG LEU THR ARG ASP ILE THR THR LEU ALA PRO SEQRES 26 A 378 SER THR MET LYS ILE LYS VAL VAL ALA PRO PRO GLU ARG SEQRES 27 A 378 LYS TYR SER VAL TRP ILE GLY GLY SER ILE LEU SER SER SEQRES 28 A 378 LEU SER THR PHE GLN GLN MET TRP ILE THR LYS GLU GLU SEQRES 29 A 378 TYR ASP GLU SER GLY PRO SER ILE VAL HIS ARG LYS CYS SEQRES 30 A 378 PHE SEQRES 1 G 127 GLY PRO MET VAL VAL GLU HIS PRO GLU PHE LEU LYS ALA SEQRES 2 G 127 GLY LYS GLU PRO GLY LEU GLN ILE TRP ARG VAL GLU LYS SEQRES 3 G 127 PHE ASP LEU VAL PRO VAL PRO PRO ASN LEU TYR GLY ASP SEQRES 4 G 127 PHE PHE THR GLY ASP ALA TYR VAL ILE LEU LYS THR VAL SEQRES 5 G 127 GLN LEU ARG ASN GLY ASN LEU GLN TYR ASP LEU HIS TYR SEQRES 6 G 127 TRP LEU GLY ASN GLU CYS SER GLN ASP GLU SER GLY ALA SEQRES 7 G 127 ALA ALA ILE PHE THR VAL GLN LEU ASP ASP TYR LEU ASN SEQRES 8 G 127 GLY ARG ALA VAL GLN HIS ARG GLU VAL GLN GLY PHE GLU SEQRES 9 G 127 SER SER THR PHE SER GLY TYR PHE LYS SER GLY LEU LYS SEQRES 10 G 127 TYR LYS LYS GLY GLY VAL ALA SER GLY PHE HET ATP A 401 42 HET ADP A 402 38 HET MG A 403 1 HET K A 404 1 HET BTB A 405 66 HET PEG A 406 17 HET NA A 407 1 HET CL A 408 1 HET CA G 201 1 HET CA G 202 1 HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM K POTASSIUM ION HETNAM BTB 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL- HETNAM 2 BTB PROPANE-1,3-DIOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM NA SODIUM ION HETNAM CL CHLORIDE ION HETNAM CA CALCIUM ION HETSYN BTB BIS-TRIS BUFFER FORMUL 3 ATP C10 H16 N5 O13 P3 FORMUL 4 ADP C10 H15 N5 O10 P2 FORMUL 5 MG MG 2+ FORMUL 6 K K 1+ FORMUL 7 BTB C8 H19 N O5 FORMUL 8 PEG C4 H10 O3 FORMUL 9 NA NA 1+ FORMUL 10 CL CL 1- FORMUL 11 CA 2(CA 2+) FORMUL 13 HOH *517(H2 O) HELIX 1 AA1 GLY A 56 THR A 61 1 6 HELIX 2 AA2 ASN A 79 ASN A 93 1 15 HELIX 3 AA3 ALA A 98 HIS A 102 5 5 HELIX 4 AA4 PRO A 113 SER A 127 1 15 HELIX 5 AA5 GLN A 138 SER A 146 1 9 HELIX 6 AA6 PRO A 173 ILE A 176 5 4 HELIX 7 AA7 ALA A 182 LEU A 194 1 13 HELIX 8 AA8 HIS A 195 GLY A 198 5 4 HELIX 9 AA9 THR A 203 CYS A 218 1 16 HELIX 10 AB1 ASN A 223 GLN A 233 1 11 HELIX 11 AB2 ASN A 253 ALA A 261 1 9 HELIX 12 AB3 LEU A 262 PHE A 263 5 2 HELIX 13 AB4 GLN A 264 GLY A 269 5 6 HELIX 14 AB5 GLY A 274 LYS A 285 1 12 HELIX 15 AB6 ASP A 287 GLY A 296 1 10 HELIX 16 AB7 GLY A 302 MET A 306 5 5 HELIX 17 AB8 GLY A 309 ALA A 322 1 14 HELIX 18 AB9 GLU A 335 LYS A 337 5 3 HELIX 19 AC1 TYR A 338 LEU A 350 1 13 HELIX 20 AC2 THR A 352 MET A 356 5 5 HELIX 21 AC3 LYS A 360 SER A 366 1 7 HELIX 22 AC4 HIS G 5 ALA G 11 1 7 HELIX 23 AC5 PRO G 31 TYR G 35 5 5 HELIX 24 AC6 SER G 70 LEU G 88 1 19 HELIX 25 AC7 SER G 103 GLY G 108 1 6 SHEET 1 AA1 6 SER A 30 PRO A 33 0 SHEET 2 AA1 6 ASN A 17 VAL A 22 -1 N ALA A 20 O SER A 30 SHEET 3 AA1 6 LEU A 9 ASN A 13 -1 N ASP A 12 O LYS A 19 SHEET 4 AA1 6 VAL A 104 GLU A 108 1 O LEU A 105 N LEU A 9 SHEET 5 AA1 6 ALA A 132 ILE A 137 1 O TYR A 134 N LEU A 106 SHEET 6 AA1 6 ILE A 358 THR A 359 -1 O ILE A 358 N MET A 133 SHEET 1 AA2 3 PHE A 54 VAL A 55 0 SHEET 2 AA2 3 VAL A 36 PRO A 39 -1 N GLY A 37 O PHE A 54 SHEET 3 AA2 3 LEU A 66 LYS A 69 -1 O THR A 67 N ARG A 38 SHEET 1 AA3 2 ILE A 72 GLU A 73 0 SHEET 2 AA3 2 ILE A 76 VAL A 77 -1 O ILE A 76 N GLU A 73 SHEET 1 AA4 3 TYR A 170 ALA A 171 0 SHEET 2 AA4 3 SER A 161 TYR A 167 -1 N TYR A 167 O TYR A 170 SHEET 3 AA4 3 MET A 177 LEU A 179 -1 O LEU A 179 N SER A 161 SHEET 1 AA5 5 TYR A 170 ALA A 171 0 SHEET 2 AA5 5 SER A 161 TYR A 167 -1 N TYR A 167 O TYR A 170 SHEET 3 AA5 5 GLY A 151 SER A 156 -1 N GLY A 151 O ILE A 166 SHEET 4 AA5 5 ILE A 298 SER A 301 1 O VAL A 299 N ILE A 152 SHEET 5 AA5 5 VAL A 330 VAL A 331 1 O VAL A 331 N ILE A 298 SHEET 1 AA6 2 LYS A 239 GLU A 242 0 SHEET 2 AA6 2 ILE A 248 VAL A 251 -1 O ILE A 249 N TYR A 241 SHEET 1 AA7 5 ASP G 26 PRO G 29 0 SHEET 2 AA7 5 GLY G 16 GLU G 23 -1 N ARG G 21 O VAL G 28 SHEET 3 AA7 5 ALA G 43 GLN G 51 -1 O VAL G 45 N TRP G 20 SHEET 4 AA7 5 LEU G 57 LEU G 65 -1 O HIS G 62 N ILE G 46 SHEET 5 AA7 5 ALA G 92 VAL G 98 1 O GLU G 97 N TYR G 63 SHEET 1 AA8 2 ASP G 37 PHE G 39 0 SHEET 2 AA8 2 LYS G 115 LYS G 117 1 O LYS G 115 N PHE G 38 LINK OD1 ASP A 155 K K A 404 1555 1555 2.78 LINK O VAL A 160 K K A 404 1555 1555 2.87 LINK OE1 GLU A 168 CA CA G 202 1555 1555 2.54 LINK O LYS A 292 NA NA A 407 1555 1555 2.73 LINK O LYS A 327 NA NA A 407 1555 1555 2.63 LINK O2GAATP A 401 MG MG A 403 1555 1555 2.06 LINK O1BAATP A 401 MG MG A 403 1555 1555 2.18 LINK O1GAATP A 401 K K A 404 1555 1555 3.37 LINK O2GAATP A 401 K K A 404 1555 1555 2.97 LINK O2BBADP A 402 MG MG A 403 1555 1555 2.04 LINK MG MG A 403 O HOH A 535 1555 1555 2.10 LINK MG MG A 403 O BHOH A 537 1555 1555 2.14 LINK MG MG A 403 O HOH A 565 1555 1555 2.10 LINK MG MG A 403 O HOH A 577 1555 1555 2.09 LINK MG MG A 403 O HOH A 725 1555 1555 2.10 LINK K K A 404 O BHOH A 537 1555 1555 2.77 LINK K K A 404 O HOH A 600 1555 1555 2.77 LINK NA NA A 407 O HOH A 838 1555 1555 2.53 LINK O GLY G 41 CA CA G 201 1555 1555 2.30 LINK OD1 ASP G 42 CA CA G 201 1555 1555 2.35 LINK OE1 GLU G 73 CA CA G 201 1555 1555 2.50 LINK OE2 GLU G 73 CA CA G 201 1555 1555 2.42 LINK OD1 ASP G 85 CA CA G 202 1555 1555 3.02 LINK OD2 ASP G 85 CA CA G 202 1555 1555 2.43 LINK O GLY G 90 CA CA G 202 1555 1555 2.53 LINK O ALA G 92 CA CA G 202 1555 1555 2.34 LINK O VAL G 121 CA CA G 201 1555 1555 2.36 LINK CA CA G 201 O HOH G 388 1555 1555 2.44 LINK CA CA G 201 O HOH G 395 1555 1555 2.44 LINK CA CA G 202 O HOH G 354 1555 1555 2.65 LINK CA CA G 202 O HOH G 377 1555 1555 2.31 SITE 1 AC1 30 GLY A 14 SER A 15 GLY A 16 ASN A 17 SITE 2 AC1 30 LYS A 19 GLY A 157 ASP A 158 GLY A 159 SITE 3 AC1 30 VAL A 160 GLY A 183 ARG A 211 LYS A 214 SITE 4 AC1 30 GLU A 215 GLY A 303 THR A 304 MET A 306 SITE 5 AC1 30 TYR A 307 LYS A 337 ADP A 402 MG A 403 SITE 6 AC1 30 K A 404 HOH A 505 HOH A 510 HOH A 527 SITE 7 AC1 30 HOH A 537 HOH A 562 HOH A 565 HOH A 602 SITE 8 AC1 30 HOH A 634 HOH A 707 SITE 1 AC2 29 GLY A 14 SER A 15 GLY A 16 ASN A 17 SITE 2 AC2 29 LYS A 19 GLY A 157 ASP A 158 GLY A 183 SITE 3 AC2 29 ARG A 211 LYS A 214 GLU A 215 GLY A 302 SITE 4 AC2 29 GLY A 303 THR A 304 MET A 306 TYR A 307 SITE 5 AC2 29 LYS A 337 ATP A 401 MG A 403 HOH A 510 SITE 6 AC2 29 HOH A 527 HOH A 537 HOH A 562 HOH A 565 SITE 7 AC2 29 HOH A 577 HOH A 602 HOH A 634 HOH A 725 SITE 8 AC2 29 HOH A 784 SITE 1 AC3 7 ATP A 401 ADP A 402 HOH A 535 HOH A 537 SITE 2 AC3 7 HOH A 565 HOH A 577 HOH A 725 SITE 1 AC4 6 ASP A 155 GLY A 157 VAL A 160 ATP A 401 SITE 2 AC4 6 HOH A 537 HOH A 600 SITE 1 AC5 8 ARG A 29 SER A 30 ASN A 93 GLU A 94 SITE 2 AC5 8 ARG A 96 HOH A 543 HOH A 698 HOH A 788 SITE 1 AC6 9 SER A 145 SER A 146 ARG A 148 LYS A 329 SITE 2 AC6 9 VAL A 331 PRO A 333 GLU A 335 HOH A 666 SITE 3 AC6 9 ARG G 96 SITE 1 AC7 4 LYS A 292 GLY A 296 LYS A 327 HOH A 838 SITE 1 AC8 7 THR A 319 THR A 320 ALA A 322 SER A 324 SITE 2 AC8 7 HOH A 576 HOH A 815 HOH A 818 SITE 1 AC9 6 GLY G 41 ASP G 42 GLU G 73 VAL G 121 SITE 2 AC9 6 HOH G 388 HOH G 395 SITE 1 AD1 6 GLU A 168 ASP G 85 GLY G 90 ALA G 92 SITE 2 AD1 6 HOH G 354 HOH G 377 CRYST1 68.760 71.450 110.040 90.00 90.00 90.00 P 21 2 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014543 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013996 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009088 0.00000