HEADER CONTRACTILE PROTEIN 09-NOV-18 6I4K TITLE CRYSTAL STRUCTURE OF PLASMODIUM FALCIPARUM ACTIN I (G115A MUTANT) IN TITLE 2 THE CA-ATP STATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACTIN-1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ACTIN I; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: GELSOLIN; COMPND 9 CHAIN: G; COMPND 10 SYNONYM: ACTIN-DEPOLYMERIZING FACTOR,ADF,BREVIN; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM; SOURCE 3 ORGANISM_COMMON: ISOLATE 3D7; SOURCE 4 ORGANISM_TAXID: 36329; SOURCE 5 GENE: PFL2215W; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 10 ORGANISM_COMMON: MOUSE; SOURCE 11 ORGANISM_TAXID: 10090; SOURCE 12 GENE: GSN, GSB; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HYDROLASE, FILAMENTOUS, GLIDEOSOME, CYTOSKELETON, CONTRACTILE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR E.-P.KUMPULA,A.J.LOPEZ,L.TAJEDIN,H.HAN,I.KURSULA REVDAT 2 24-JAN-24 6I4K 1 LINK REVDAT 1 26-JUN-19 6I4K 0 JRNL AUTH E.P.KUMPULA,A.J.LOPEZ,L.TAJEDIN,H.HAN,I.KURSULA JRNL TITL ATOMIC VIEW INTO PLASMODIUM ACTIN POLYMERIZATION, ATP JRNL TITL 2 HYDROLYSIS, AND FRAGMENTATION. JRNL REF PLOS BIOL. V. 17 00315 2019 JRNL REFN ESSN 1545-7885 JRNL PMID 31199804 JRNL DOI 10.1371/JOURNAL.PBIO.3000315 REMARK 2 REMARK 2 RESOLUTION. 1.83 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.83 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.80 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.290 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 94311 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.161 REMARK 3 R VALUE (WORKING SET) : 0.159 REMARK 3 FREE R VALUE : 0.197 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 4734 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.5300 - 5.6800 1.00 2996 151 0.1685 0.1777 REMARK 3 2 5.6800 - 4.5100 1.00 2983 161 0.1159 0.1497 REMARK 3 3 4.5100 - 3.9400 1.00 3004 154 0.1039 0.1550 REMARK 3 4 3.9400 - 3.5800 1.00 2973 163 0.1212 0.1666 REMARK 3 5 3.5800 - 3.3300 1.00 3006 159 0.1298 0.1826 REMARK 3 6 3.3300 - 3.1300 1.00 2964 160 0.1399 0.1666 REMARK 3 7 3.1300 - 2.9700 1.00 2995 165 0.1451 0.1783 REMARK 3 8 2.9700 - 2.8400 1.00 3003 160 0.1438 0.1980 REMARK 3 9 2.8400 - 2.7300 1.00 2982 161 0.1400 0.1837 REMARK 3 10 2.7300 - 2.6400 1.00 2997 153 0.1402 0.1628 REMARK 3 11 2.6400 - 2.5600 1.00 2984 158 0.1433 0.2032 REMARK 3 12 2.5600 - 2.4800 1.00 2970 155 0.1445 0.1679 REMARK 3 13 2.4800 - 2.4200 1.00 3040 159 0.1484 0.2116 REMARK 3 14 2.4200 - 2.3600 1.00 2974 154 0.1514 0.1844 REMARK 3 15 2.3600 - 2.3100 1.00 2957 159 0.1570 0.2327 REMARK 3 16 2.3100 - 2.2600 1.00 3000 156 0.1615 0.1704 REMARK 3 17 2.2600 - 2.2100 1.00 3023 161 0.1690 0.2072 REMARK 3 18 2.2100 - 2.1700 1.00 2972 155 0.1792 0.2337 REMARK 3 19 2.1700 - 2.1300 1.00 2980 159 0.1878 0.1954 REMARK 3 20 2.1300 - 2.0900 1.00 2989 159 0.1858 0.2619 REMARK 3 21 2.0900 - 2.0600 1.00 2971 157 0.2055 0.2444 REMARK 3 22 2.0600 - 2.0300 1.00 3030 161 0.2155 0.2580 REMARK 3 23 2.0300 - 2.0000 1.00 2984 158 0.2198 0.2400 REMARK 3 24 2.0000 - 1.9700 1.00 3027 162 0.2371 0.2869 REMARK 3 25 1.9700 - 1.9400 1.00 2943 155 0.2445 0.2479 REMARK 3 26 1.9400 - 1.9200 1.00 2989 155 0.2480 0.2734 REMARK 3 27 1.9200 - 1.9000 1.00 3008 160 0.2694 0.3342 REMARK 3 28 1.9000 - 1.8700 0.99 2945 158 0.2899 0.3148 REMARK 3 29 1.8700 - 1.8500 0.99 2978 156 0.3066 0.3052 REMARK 3 30 1.8500 - 1.8300 0.97 2910 150 0.3327 0.3269 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.198 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.079 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.02 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.93 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 4295 REMARK 3 ANGLE : 0.985 5853 REMARK 3 CHIRALITY : 0.053 624 REMARK 3 PLANARITY : 0.006 767 REMARK 3 DIHEDRAL : 10.997 2573 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 34 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.3814 23.3431 148.2810 REMARK 3 T TENSOR REMARK 3 T11: 0.4967 T22: 0.2771 REMARK 3 T33: 0.3574 T12: 0.0129 REMARK 3 T13: 0.1098 T23: -0.0529 REMARK 3 L TENSOR REMARK 3 L11: 2.9050 L22: 3.0559 REMARK 3 L33: 2.8239 L12: -1.3344 REMARK 3 L13: 0.6813 L23: 2.2360 REMARK 3 S TENSOR REMARK 3 S11: 0.2404 S12: -0.4108 S13: 0.7310 REMARK 3 S21: 0.3641 S22: -0.0963 S23: 0.1588 REMARK 3 S31: -0.7920 S32: -0.2076 S33: 0.1498 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 138 THROUGH 337 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.1765 15.6953 122.5719 REMARK 3 T TENSOR REMARK 3 T11: 0.1632 T22: 0.1853 REMARK 3 T33: 0.1553 T12: -0.0144 REMARK 3 T13: -0.0247 T23: 0.0104 REMARK 3 L TENSOR REMARK 3 L11: 0.7538 L22: 1.7942 REMARK 3 L33: 0.5844 L12: -0.2728 REMARK 3 L13: -0.0685 L23: -0.2582 REMARK 3 S TENSOR REMARK 3 S11: -0.0316 S12: 0.0672 S13: 0.0982 REMARK 3 S21: -0.0261 S22: 0.0416 S23: 0.0440 REMARK 3 S31: -0.0842 S32: 0.0141 S33: -0.0139 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 5 THROUGH 33 OR RESID 75 REMARK 3 THROUGH 137 OR RESID 339 THROUGH 375 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.8173 1.0150 146.6663 REMARK 3 T TENSOR REMARK 3 T11: 0.1544 T22: 0.2099 REMARK 3 T33: 0.1460 T12: 0.0018 REMARK 3 T13: -0.0088 T23: 0.0162 REMARK 3 L TENSOR REMARK 3 L11: 1.2298 L22: 1.2065 REMARK 3 L33: 1.8463 L12: 0.3146 REMARK 3 L13: -0.2807 L23: 0.0699 REMARK 3 S TENSOR REMARK 3 S11: 0.0185 S12: -0.1653 S13: -0.0910 REMARK 3 S21: 0.1271 S22: -0.0203 S23: -0.0506 REMARK 3 S31: 0.0762 S32: 0.1425 S33: -0.0270 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'G' AND (RESID 27 THROUGH 150 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.7534 -18.9615 124.4657 REMARK 3 T TENSOR REMARK 3 T11: 0.1553 T22: 0.1343 REMARK 3 T33: 0.1726 T12: -0.0125 REMARK 3 T13: -0.0052 T23: 0.0145 REMARK 3 L TENSOR REMARK 3 L11: 2.2768 L22: 2.1328 REMARK 3 L33: 2.3182 L12: -0.2540 REMARK 3 L13: 0.3636 L23: 0.0135 REMARK 3 S TENSOR REMARK 3 S11: 0.0551 S12: -0.0083 S13: -0.2121 REMARK 3 S21: 0.0041 S22: -0.0263 S23: -0.1547 REMARK 3 S31: 0.1417 S32: 0.0464 S33: 0.0203 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6I4K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 09-NOV-18. REMARK 100 THE DEPOSITION ID IS D_1200012805. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-SEP-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.953720 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 94327 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.830 REMARK 200 RESOLUTION RANGE LOW (A) : 43.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.13560 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.3400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.83 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.5 REMARK 200 DATA REDUNDANCY IN SHELL : 2.60 REMARK 200 R MERGE FOR SHELL (I) : 0.13560 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.910 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4CBU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 23% PEG3350, 0.1M BIS-TRIS PH 5.9, REMARK 280 0.2M K-SCN; 20% PEG400 USED FOR CRYOPROTECTION, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,-Y,-Z+1/2 REMARK 290 4555 -X+1/2,-Y,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 34.91500 REMARK 290 SMTRY2 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 55.46500 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 34.91500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 55.46500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20590 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -54.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 786 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 875 LIES ON A SPECIAL POSITION. REMARK 375 HOH G 410 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 GLU A 3 REMARK 465 GLU A 4 REMARK 465 GLY A 43 REMARK 465 ILE A 44 REMARK 465 MET A 45 REMARK 465 VAL A 46 REMARK 465 GLY A 47 REMARK 465 MET A 48 REMARK 465 GLU A 49 REMARK 465 GLU A 50 REMARK 465 LYS A 51 REMARK 465 PHE A 376 REMARK 465 GLY G -1 REMARK 465 PRO G 0 REMARK 465 MET G 1 REMARK 465 VAL G 2 REMARK 465 ARG G 53 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH22 ARG A 197 O HOH A 503 1.41 REMARK 500 HG SER A 339 O HOH A 515 1.58 REMARK 500 O HOH A 577 O HOH A 800 1.74 REMARK 500 OD1 ASN A 129 O HOH A 501 2.09 REMARK 500 O HOH A 537 O HOH A 659 2.11 REMARK 500 OH TYR A 338 O HOH A 502 2.12 REMARK 500 OE1 GLN G 51 O HOH G 301 2.13 REMARK 500 NH2 ARG A 197 O HOH A 503 2.15 REMARK 500 O HOH G 415 O HOH G 426 2.17 REMARK 500 O HOH A 604 O HOH A 858 2.18 REMARK 500 O HOH G 365 O HOH G 397 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH G 392 O HOH G 404 2557 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 181 102.10 -165.03 REMARK 500 ALA A 182 -156.80 -154.60 REMARK 500 ALA A 182 -156.80 -153.42 REMARK 500 SER A 202 -28.70 -156.52 REMARK 500 ASN A 297 58.69 -146.17 REMARK 500 LEU G 52 -164.36 -108.20 REMARK 500 ASN G 54 81.97 -42.47 REMARK 500 LEU G 88 30.25 -86.85 REMARK 500 LEU G 88 30.22 -86.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 877 DISTANCE = 5.81 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA G 202 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 168 OE1 REMARK 620 2 ASP G 85 OD1 137.8 REMARK 620 3 ASP G 85 OD2 89.7 48.4 REMARK 620 4 GLY G 90 O 145.9 75.2 121.2 REMARK 620 5 ALA G 92 O 97.7 78.0 86.9 98.0 REMARK 620 6 HOH G 374 O 87.3 87.2 76.6 86.5 162.8 REMARK 620 7 HOH G 378 O 74.1 148.0 162.0 73.0 102.8 94.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 402 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ATP A 401 O2G REMARK 620 2 ATP A 401 O1B 78.6 REMARK 620 3 HOH A 557 O 71.1 98.0 REMARK 620 4 HOH A 569 O 150.2 85.3 136.6 REMARK 620 5 HOH A 600 O 98.0 176.4 81.6 97.4 REMARK 620 6 HOH A 602 O 131.1 89.8 63.7 73.1 93.2 REMARK 620 7 HOH A 641 O 78.5 98.1 141.7 79.2 80.2 150.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA G 201 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY G 41 O REMARK 620 2 ASP G 42 OD1 77.3 REMARK 620 3 GLU G 73 OE1 76.6 101.8 REMARK 620 4 GLU G 73 OE2 124.9 90.3 53.6 REMARK 620 5 VAL G 121 O 150.4 90.3 132.7 81.2 REMARK 620 6 HOH G 363 O 100.8 174.2 72.4 86.3 93.8 REMARK 620 7 HOH G 386 O 77.2 99.5 141.3 157.5 78.6 85.3 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ATP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SCN A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BTB A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA G 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA G 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SCN G 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BME G 204 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6I4D RELATED DB: PDB REMARK 900 RELATED ID: 6I4E RELATED DB: PDB REMARK 900 RELATED ID: 6I4F RELATED DB: PDB REMARK 900 RELATED ID: 6I4G RELATED DB: PDB REMARK 900 RELATED ID: 6I4H RELATED DB: PDB REMARK 900 RELATED ID: 6I4I RELATED DB: PDB REMARK 900 RELATED ID: 6I4J RELATED DB: PDB DBREF 6I4K A 1 376 UNP Q8I4X0 ACT1_PLAF7 1 376 DBREF 6I4K G 1 125 UNP P13020 GELS_MOUSE 1 125 SEQADV 6I4K GLY A -1 UNP Q8I4X0 EXPRESSION TAG SEQADV 6I4K ALA A 0 UNP Q8I4X0 EXPRESSION TAG SEQADV 6I4K ALA A 115 UNP Q8I4X0 GLY 115 ENGINEERED MUTATION SEQADV 6I4K GLY G -1 UNP P13020 EXPRESSION TAG SEQADV 6I4K PRO G 0 UNP P13020 EXPRESSION TAG SEQRES 1 A 378 GLY ALA MET GLY GLU GLU ASP VAL GLN ALA LEU VAL VAL SEQRES 2 A 378 ASP ASN GLY SER GLY ASN VAL LYS ALA GLY VAL ALA GLY SEQRES 3 A 378 ASP ASP ALA PRO ARG SER VAL PHE PRO SER ILE VAL GLY SEQRES 4 A 378 ARG PRO LYS ASN PRO GLY ILE MET VAL GLY MET GLU GLU SEQRES 5 A 378 LYS ASP ALA PHE VAL GLY ASP GLU ALA GLN THR LYS ARG SEQRES 6 A 378 GLY ILE LEU THR LEU LYS TYR PRO ILE GLU HIS GLY ILE SEQRES 7 A 378 VAL THR ASN TRP ASP ASP MET GLU LYS ILE TRP HIS HIS SEQRES 8 A 378 THR PHE TYR ASN GLU LEU ARG ALA ALA PRO GLU GLU HIS SEQRES 9 A 378 PRO VAL LEU LEU THR GLU ALA PRO LEU ASN PRO LYS ALA SEQRES 10 A 378 ASN ARG GLU ARG MET THR GLN ILE MET PHE GLU SER PHE SEQRES 11 A 378 ASN VAL PRO ALA MET TYR VAL ALA ILE GLN ALA VAL LEU SEQRES 12 A 378 SER LEU TYR SER SER GLY ARG THR THR GLY ILE VAL LEU SEQRES 13 A 378 ASP SER GLY ASP GLY VAL SER HIS THR VAL PRO ILE TYR SEQRES 14 A 378 GLU GLY TYR ALA LEU PRO HIS ALA ILE MET ARG LEU ASP SEQRES 15 A 378 LEU ALA GLY ARG ASP LEU THR GLU TYR LEU MET LYS ILE SEQRES 16 A 378 LEU HIS GLU ARG GLY TYR GLY PHE SER THR SER ALA GLU SEQRES 17 A 378 LYS GLU ILE VAL ARG ASP ILE LYS GLU LYS LEU CYS TYR SEQRES 18 A 378 ILE ALA LEU ASN PHE ASP GLU GLU MET LYS THR SER GLU SEQRES 19 A 378 GLN SER SER ASP ILE GLU LYS SER TYR GLU LEU PRO ASP SEQRES 20 A 378 GLY ASN ILE ILE THR VAL GLY ASN GLU ARG PHE ARG CYS SEQRES 21 A 378 PRO GLU ALA LEU PHE GLN PRO SER PHE LEU GLY LYS GLU SEQRES 22 A 378 ALA ALA GLY ILE HIS THR THR THR PHE ASN SER ILE LYS SEQRES 23 A 378 LYS CYS ASP VAL ASP ILE ARG LYS ASP LEU TYR GLY ASN SEQRES 24 A 378 ILE VAL LEU SER GLY GLY THR THR MET TYR GLU GLY ILE SEQRES 25 A 378 GLY GLU ARG LEU THR ARG ASP ILE THR THR LEU ALA PRO SEQRES 26 A 378 SER THR MET LYS ILE LYS VAL VAL ALA PRO PRO GLU ARG SEQRES 27 A 378 LYS TYR SER VAL TRP ILE GLY GLY SER ILE LEU SER SER SEQRES 28 A 378 LEU SER THR PHE GLN GLN MET TRP ILE THR LYS GLU GLU SEQRES 29 A 378 TYR ASP GLU SER GLY PRO SER ILE VAL HIS ARG LYS CYS SEQRES 30 A 378 PHE SEQRES 1 G 127 GLY PRO MET VAL VAL GLU HIS PRO GLU PHE LEU LYS ALA SEQRES 2 G 127 GLY LYS GLU PRO GLY LEU GLN ILE TRP ARG VAL GLU LYS SEQRES 3 G 127 PHE ASP LEU VAL PRO VAL PRO PRO ASN LEU TYR GLY ASP SEQRES 4 G 127 PHE PHE THR GLY ASP ALA TYR VAL ILE LEU LYS THR VAL SEQRES 5 G 127 GLN LEU ARG ASN GLY ASN LEU GLN TYR ASP LEU HIS TYR SEQRES 6 G 127 TRP LEU GLY ASN GLU CYS SER GLN ASP GLU SER GLY ALA SEQRES 7 G 127 ALA ALA ILE PHE THR VAL GLN LEU ASP ASP TYR LEU ASN SEQRES 8 G 127 GLY ARG ALA VAL GLN HIS ARG GLU VAL GLN GLY PHE GLU SEQRES 9 G 127 SER SER THR PHE SER GLY TYR PHE LYS SER GLY LEU LYS SEQRES 10 G 127 TYR LYS LYS GLY GLY VAL ALA SER GLY PHE HET ATP A 401 42 HET CA A 402 1 HET SCN A 403 3 HET BTB A 404 33 HET PEG A 405 17 HET CL A 406 1 HET CA G 201 1 HET CA G 202 1 HET SCN G 203 3 HET BME G 204 10 HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM CA CALCIUM ION HETNAM SCN THIOCYANATE ION HETNAM BTB 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL- HETNAM 2 BTB PROPANE-1,3-DIOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM CL CHLORIDE ION HETNAM BME BETA-MERCAPTOETHANOL HETSYN BTB BIS-TRIS BUFFER FORMUL 3 ATP C10 H16 N5 O13 P3 FORMUL 4 CA 3(CA 2+) FORMUL 5 SCN 2(C N S 1-) FORMUL 6 BTB C8 H19 N O5 FORMUL 7 PEG C4 H10 O3 FORMUL 8 CL CL 1- FORMUL 12 BME C2 H6 O S FORMUL 13 HOH *517(H2 O) HELIX 1 AA1 GLY A 56 LYS A 62 1 7 HELIX 2 AA2 ASN A 79 ASN A 93 1 15 HELIX 3 AA3 ALA A 98 HIS A 102 5 5 HELIX 4 AA4 PRO A 113 SER A 127 1 15 HELIX 5 AA5 GLN A 138 SER A 146 1 9 HELIX 6 AA6 PRO A 173 ILE A 176 5 4 HELIX 7 AA7 ALA A 182 LEU A 194 1 13 HELIX 8 AA8 HIS A 195 GLY A 198 5 4 HELIX 9 AA9 THR A 203 CYS A 218 1 16 HELIX 10 AB1 ASN A 223 GLN A 233 1 11 HELIX 11 AB2 ASN A 253 ALA A 261 1 9 HELIX 12 AB3 LEU A 262 PHE A 263 5 2 HELIX 13 AB4 GLN A 264 GLY A 269 5 6 HELIX 14 AB5 GLY A 274 LYS A 285 1 12 HELIX 15 AB6 ASP A 287 GLY A 296 1 10 HELIX 16 AB7 GLY A 302 MET A 306 5 5 HELIX 17 AB8 GLY A 309 ALA A 322 1 14 HELIX 18 AB9 GLU A 335 LYS A 337 5 3 HELIX 19 AC1 TYR A 338 LEU A 350 1 13 HELIX 20 AC2 PHE A 353 TRP A 357 5 5 HELIX 21 AC3 LYS A 360 GLY A 367 1 8 HELIX 22 AC4 SER A 369 CYS A 375 1 7 HELIX 23 AC5 HIS G 5 ALA G 11 1 7 HELIX 24 AC6 PRO G 31 TYR G 35 5 5 HELIX 25 AC7 SER G 70 LEU G 88 1 19 HELIX 26 AC8 SER G 103 GLY G 108 1 6 SHEET 1 AA1 6 SER A 30 PRO A 33 0 SHEET 2 AA1 6 ASN A 17 VAL A 22 -1 N ALA A 20 O SER A 30 SHEET 3 AA1 6 LEU A 9 ASN A 13 -1 N ASP A 12 O LYS A 19 SHEET 4 AA1 6 VAL A 104 GLU A 108 1 O LEU A 105 N LEU A 9 SHEET 5 AA1 6 ALA A 132 ILE A 137 1 O TYR A 134 N LEU A 106 SHEET 6 AA1 6 ILE A 358 THR A 359 -1 O ILE A 358 N MET A 133 SHEET 1 AA2 3 PHE A 54 VAL A 55 0 SHEET 2 AA2 3 VAL A 36 PRO A 39 -1 N GLY A 37 O PHE A 54 SHEET 3 AA2 3 LEU A 66 LYS A 69 -1 O THR A 67 N ARG A 38 SHEET 1 AA3 2 ILE A 72 GLU A 73 0 SHEET 2 AA3 2 ILE A 76 VAL A 77 -1 O ILE A 76 N GLU A 73 SHEET 1 AA4 3 TYR A 170 ALA A 171 0 SHEET 2 AA4 3 SER A 161 TYR A 167 -1 N TYR A 167 O TYR A 170 SHEET 3 AA4 3 MET A 177 LEU A 179 -1 O LEU A 179 N SER A 161 SHEET 1 AA5 5 TYR A 170 ALA A 171 0 SHEET 2 AA5 5 SER A 161 TYR A 167 -1 N TYR A 167 O TYR A 170 SHEET 3 AA5 5 GLY A 151 SER A 156 -1 N GLY A 151 O ILE A 166 SHEET 4 AA5 5 ILE A 298 SER A 301 1 O VAL A 299 N ILE A 152 SHEET 5 AA5 5 VAL A 330 VAL A 331 1 O VAL A 331 N ILE A 298 SHEET 1 AA6 2 LYS A 239 GLU A 242 0 SHEET 2 AA6 2 ILE A 248 VAL A 251 -1 O VAL A 251 N LYS A 239 SHEET 1 AA7 5 ASP G 26 PRO G 29 0 SHEET 2 AA7 5 GLY G 16 GLU G 23 -1 N ARG G 21 O VAL G 28 SHEET 3 AA7 5 ALA G 43 GLN G 51 -1 O VAL G 45 N TRP G 20 SHEET 4 AA7 5 LEU G 57 LEU G 65 -1 O HIS G 62 N ILE G 46 SHEET 5 AA7 5 ALA G 92 VAL G 98 1 O GLU G 97 N TYR G 63 SHEET 1 AA8 2 ASP G 37 PHE G 39 0 SHEET 2 AA8 2 LYS G 115 LYS G 117 1 O LYS G 115 N PHE G 38 LINK OE1 GLU A 168 CA CA G 202 1555 1555 2.54 LINK O2G ATP A 401 CA CA A 402 1555 1555 2.30 LINK O1B ATP A 401 CA CA A 402 1555 1555 2.30 LINK CA CA A 402 O HOH A 557 1555 1555 2.84 LINK CA CA A 402 O HOH A 569 1555 1555 2.52 LINK CA CA A 402 O HOH A 600 1555 1555 2.35 LINK CA CA A 402 O HOH A 602 1555 1555 2.41 LINK CA CA A 402 O HOH A 641 1555 1555 2.40 LINK O GLY G 41 CA CA G 201 1555 1555 2.28 LINK OD1 ASP G 42 CA CA G 201 1555 1555 2.33 LINK OE1 GLU G 73 CA CA G 201 1555 1555 2.44 LINK OE2 GLU G 73 CA CA G 201 1555 1555 2.42 LINK OD1 ASP G 85 CA CA G 202 1555 1555 2.90 LINK OD2 ASP G 85 CA CA G 202 1555 1555 2.29 LINK O GLY G 90 CA CA G 202 1555 1555 2.54 LINK O ALA G 92 CA CA G 202 1555 1555 2.33 LINK O VAL G 121 CA CA G 201 1555 1555 2.32 LINK CA CA G 201 O HOH G 363 1555 1555 2.33 LINK CA CA G 201 O HOH G 386 1555 1555 2.43 LINK CA CA G 202 O HOH G 374 1555 1555 2.30 LINK CA CA G 202 O HOH G 378 1555 1555 2.30 SITE 1 AC1 27 GLY A 14 SER A 15 GLY A 16 ASN A 17 SITE 2 AC1 27 LYS A 19 GLY A 157 ASP A 158 GLY A 159 SITE 3 AC1 27 VAL A 160 GLY A 183 ARG A 211 LYS A 214 SITE 4 AC1 27 GLU A 215 GLY A 302 GLY A 303 THR A 304 SITE 5 AC1 27 MET A 306 TYR A 307 LYS A 337 CA A 402 SITE 6 AC1 27 HOH A 550 HOH A 557 HOH A 575 HOH A 583 SITE 7 AC1 27 HOH A 626 HOH A 636 HOH A 641 SITE 1 AC2 6 ATP A 401 HOH A 557 HOH A 569 HOH A 600 SITE 2 AC2 6 HOH A 602 HOH A 641 SITE 1 AC3 4 VAL A 22 PRO A 173 BTB A 404 HOH A 765 SITE 1 AC4 9 SER A 30 ASN A 93 GLU A 94 ARG A 96 SITE 2 AC4 9 SCN A 403 HOH A 513 HOH A 654 HOH A 757 SITE 3 AC4 9 HOH A 765 SITE 1 AC5 7 ALA A 53 PHE A 54 VAL A 55 GLU A 58 SITE 2 AC5 7 LYS A 85 HIS A 89 ASN A 93 SITE 1 AC6 4 THR A 319 THR A 320 ALA A 322 SER A 324 SITE 1 AC7 6 GLY G 41 ASP G 42 GLU G 73 VAL G 121 SITE 2 AC7 6 HOH G 363 HOH G 386 SITE 1 AC8 6 GLU A 168 ASP G 85 GLY G 90 ALA G 92 SITE 2 AC8 6 HOH G 374 HOH G 378 SITE 1 AC9 6 PRO G 31 PHE G 39 TYR G 44 HOH G 303 SITE 2 AC9 6 HOH G 338 HOH G 440 SITE 1 AD1 4 GLY G 12 LYS G 13 TYR G 59 ARG G 91 CRYST1 69.830 71.380 110.930 90.00 90.00 90.00 P 21 2 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014320 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014010 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009015 0.00000