HEADER OXIDOREDUCTASE 10-NOV-18 6I4T TITLE CRYSTAL STRUCTURE OF THE DISEASE-CAUSING I445M MUTANT OF THE HUMAN TITLE 2 DIHYDROLIPOAMIDE DEHYDROGENASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIHYDROLIPOYL DEHYDROGENASE, MITOCHONDRIAL; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: DIHYDROLIPOAMIDE DEHYDROGENASE,GLYCINE CLEAVAGE SYSTEM L COMPND 5 PROTEIN; COMPND 6 EC: 1.8.1.4; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES; COMPND 9 OTHER_DETAILS: SEQUENCE OF THE STREP-TAG WITH LINKER AMINO ACIDS: COMPND 10 MASWSHPQFEKGALEVLFQGPG SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: DLD, GCSL, LAD, PHE3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET52B+ KEYWDS LIPOAMIDE DEHYDROGENASE, PATHOGENIC MUTATION, E3 DEFICIENCY, ALPHA- KEYWDS 2 KETOGLUTARATE DEHYDROGENASE COMPLEX, 2-OXOGLUTARATE DEHYDROGENASE KEYWDS 3 COMPLEX, PYRUVATE DEHYDROGENASE COMPLEX, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR E.SZABO,P.WILK,Z.ZAMBO,B.TOROCSIK,M.S.WEISS,V.ADAM-VIZI,A.AMBRUS REVDAT 3 24-JAN-24 6I4T 1 REMARK REVDAT 2 11-DEC-19 6I4T 1 JRNL REVDAT 1 20-NOV-19 6I4T 0 JRNL AUTH E.SZABO,P.WILK,B.NAGY,Z.ZAMBO,D.BUI,A.WEICHSEL,P.ARJUNAN, JRNL AUTH 2 B.TOROCSIK,A.HUBERT,W.FUREY,W.R.MONTFORT,F.JORDAN,M.S.WEISS, JRNL AUTH 3 V.ADAM-VIZI,A.AMBRUS JRNL TITL UNDERLYING MOLECULAR ALTERATIONS IN HUMAN DIHYDROLIPOAMIDE JRNL TITL 2 DEHYDROGENASE DEFICIENCY REVEALED BY STRUCTURAL ANALYSES OF JRNL TITL 3 DISEASE-CAUSING ENZYME VARIANTS. JRNL REF HUM.MOL.GENET. V. 28 3339 2019 JRNL REFN ESSN 1460-2083 JRNL PMID 31334547 JRNL DOI 10.1093/HMG/DDZ177 REMARK 2 REMARK 2 RESOLUTION. 1.82 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.82 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.60 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 108085 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.210 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.940 REMARK 3 FREE R VALUE TEST SET COUNT : 2093 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.6102 - 4.4957 1.00 7578 150 0.1561 0.1741 REMARK 3 2 4.4957 - 3.5688 1.00 7292 144 0.1383 0.1453 REMARK 3 3 3.5688 - 3.1178 1.00 7239 143 0.1816 0.2104 REMARK 3 4 3.1178 - 2.8328 1.00 7166 142 0.1885 0.1983 REMARK 3 5 2.8328 - 2.6298 1.00 7172 142 0.1878 0.2190 REMARK 3 6 2.6298 - 2.4748 0.99 7123 141 0.1772 0.1913 REMARK 3 7 2.4748 - 2.3508 0.99 7097 140 0.1796 0.2153 REMARK 3 8 2.3508 - 2.2485 0.98 7004 138 0.2282 0.2568 REMARK 3 9 2.2485 - 2.1619 0.98 6999 139 0.2534 0.2558 REMARK 3 10 2.1619 - 2.0873 0.99 7032 139 0.2200 0.2747 REMARK 3 11 2.0873 - 2.0221 0.99 7040 139 0.2525 0.2838 REMARK 3 12 2.0221 - 1.9643 0.99 7006 138 0.2830 0.2973 REMARK 3 13 1.9643 - 1.9126 0.99 7025 137 0.3974 0.4168 REMARK 3 14 1.9126 - 1.8659 0.99 7050 140 0.3766 0.3931 REMARK 3 15 1.8659 - 1.8235 0.87 6169 121 0.3621 0.3535 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.730 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.88 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.04 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.7458 8.8775 23.9057 REMARK 3 T TENSOR REMARK 3 T11: 0.3430 T22: 0.2365 REMARK 3 T33: 0.3706 T12: 0.0055 REMARK 3 T13: 0.1685 T23: -0.0068 REMARK 3 L TENSOR REMARK 3 L11: 1.5319 L22: 1.5547 REMARK 3 L33: 1.4326 L12: 0.3108 REMARK 3 L13: 0.9221 L23: 0.2204 REMARK 3 S TENSOR REMARK 3 S11: 0.1522 S12: -0.2158 S13: 0.3498 REMARK 3 S21: 0.4270 S22: -0.1201 S23: 0.4555 REMARK 3 S31: -0.0417 S32: -0.2150 S33: 0.0223 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 68 THROUGH 110 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.1593 -0.8892 21.5607 REMARK 3 T TENSOR REMARK 3 T11: 0.3194 T22: 0.3238 REMARK 3 T33: 0.5839 T12: -0.0108 REMARK 3 T13: 0.1888 T23: 0.0390 REMARK 3 L TENSOR REMARK 3 L11: 0.5676 L22: 1.6071 REMARK 3 L33: 0.4296 L12: -0.3525 REMARK 3 L13: -0.2394 L23: -0.5244 REMARK 3 S TENSOR REMARK 3 S11: 0.1682 S12: -0.1596 S13: 0.2507 REMARK 3 S21: 0.1649 S22: -0.0215 S23: 0.8437 REMARK 3 S31: -0.0084 S32: -0.2586 S33: -0.0656 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 111 THROUGH 187 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.7730 19.2104 16.8047 REMARK 3 T TENSOR REMARK 3 T11: 0.3122 T22: 0.2637 REMARK 3 T33: 0.5383 T12: 0.0423 REMARK 3 T13: 0.1289 T23: 0.0293 REMARK 3 L TENSOR REMARK 3 L11: 1.1808 L22: 1.9335 REMARK 3 L33: 0.7833 L12: 0.4648 REMARK 3 L13: 0.4045 L23: -0.1199 REMARK 3 S TENSOR REMARK 3 S11: -0.0772 S12: -0.0538 S13: 0.6082 REMARK 3 S21: 0.0819 S22: 0.0376 S23: 0.3910 REMARK 3 S31: -0.2100 S32: -0.1198 S33: 0.0472 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 188 THROUGH 260 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.6953 3.0329 -2.4143 REMARK 3 T TENSOR REMARK 3 T11: 0.4269 T22: 0.3392 REMARK 3 T33: 0.3465 T12: -0.0356 REMARK 3 T13: -0.0374 T23: 0.0877 REMARK 3 L TENSOR REMARK 3 L11: 2.1731 L22: 3.7616 REMARK 3 L33: 1.4230 L12: -1.2428 REMARK 3 L13: 0.7170 L23: -1.0134 REMARK 3 S TENSOR REMARK 3 S11: 0.0698 S12: 0.3922 S13: 0.2760 REMARK 3 S21: -0.6679 S22: -0.0069 S23: 0.4340 REMARK 3 S31: 0.0939 S32: -0.0307 S33: -0.0383 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 261 THROUGH 307 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.0156 17.2133 5.8999 REMARK 3 T TENSOR REMARK 3 T11: 0.3375 T22: 0.2919 REMARK 3 T33: 0.4558 T12: 0.0125 REMARK 3 T13: 0.0922 T23: 0.1284 REMARK 3 L TENSOR REMARK 3 L11: 2.9543 L22: 1.4820 REMARK 3 L33: 1.5611 L12: 0.1997 REMARK 3 L13: 1.7339 L23: -0.0374 REMARK 3 S TENSOR REMARK 3 S11: 0.0219 S12: 0.2420 S13: 0.5075 REMARK 3 S21: -0.1438 S22: -0.0105 S23: 0.2778 REMARK 3 S31: -0.0334 S32: 0.0130 S33: -0.0090 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 308 THROUGH 474 ) REMARK 3 ORIGIN FOR THE GROUP (A): 45.9766 -8.6025 11.5648 REMARK 3 T TENSOR REMARK 3 T11: 0.2794 T22: 0.2523 REMARK 3 T33: 0.3050 T12: 0.0092 REMARK 3 T13: 0.0837 T23: -0.0182 REMARK 3 L TENSOR REMARK 3 L11: 1.5201 L22: 2.2375 REMARK 3 L33: 0.7283 L12: 0.8347 REMARK 3 L13: 0.3597 L23: 0.1083 REMARK 3 S TENSOR REMARK 3 S11: 0.0217 S12: 0.1466 S13: -0.1957 REMARK 3 S21: -0.0791 S22: 0.0938 S23: -0.2344 REMARK 3 S31: 0.0730 S32: 0.0017 S33: -0.1126 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID -6 THROUGH 36 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.8190 -45.1253 6.3693 REMARK 3 T TENSOR REMARK 3 T11: 0.4879 T22: 0.3651 REMARK 3 T33: 0.5782 T12: -0.0828 REMARK 3 T13: 0.0033 T23: -0.1364 REMARK 3 L TENSOR REMARK 3 L11: 1.3626 L22: 3.5957 REMARK 3 L33: 1.8240 L12: 0.2605 REMARK 3 L13: 0.4524 L23: 0.7481 REMARK 3 S TENSOR REMARK 3 S11: -0.0933 S12: 0.4335 S13: -0.4012 REMARK 3 S21: -0.8487 S22: 0.3554 S23: -0.1290 REMARK 3 S31: -0.2501 S32: 0.2855 S33: -0.2477 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 37 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.2264 -28.0131 17.9451 REMARK 3 T TENSOR REMARK 3 T11: 0.3126 T22: 0.3005 REMARK 3 T33: 0.5346 T12: -0.0505 REMARK 3 T13: 0.0210 T23: 0.0358 REMARK 3 L TENSOR REMARK 3 L11: 3.4845 L22: 5.4262 REMARK 3 L33: 1.5361 L12: -2.7734 REMARK 3 L13: -0.8822 L23: 0.4882 REMARK 3 S TENSOR REMARK 3 S11: 0.0561 S12: -0.1386 S13: -0.1188 REMARK 3 S21: -0.0227 S22: 0.2324 S23: 0.4269 REMARK 3 S31: 0.0494 S32: -0.0231 S33: -0.2170 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 68 THROUGH 110 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.1402 -23.5650 12.4974 REMARK 3 T TENSOR REMARK 3 T11: 0.4587 T22: 0.4189 REMARK 3 T33: 0.5897 T12: -0.0472 REMARK 3 T13: -0.0848 T23: 0.0825 REMARK 3 L TENSOR REMARK 3 L11: 2.0618 L22: 4.3888 REMARK 3 L33: 0.1699 L12: -1.5336 REMARK 3 L13: -0.3816 L23: 0.4324 REMARK 3 S TENSOR REMARK 3 S11: 0.2568 S12: 0.2209 S13: -0.3239 REMARK 3 S21: -0.4867 S22: -0.0412 S23: 0.9630 REMARK 3 S31: -0.0877 S32: -0.1984 S33: -0.1868 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 111 THROUGH 152 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.6789 -51.7106 11.8243 REMARK 3 T TENSOR REMARK 3 T11: 0.4357 T22: 0.3315 REMARK 3 T33: 0.6878 T12: -0.0023 REMARK 3 T13: -0.0151 T23: -0.1233 REMARK 3 L TENSOR REMARK 3 L11: 1.8037 L22: 3.4115 REMARK 3 L33: 2.2323 L12: 1.0946 REMARK 3 L13: -0.0904 L23: 0.8769 REMARK 3 S TENSOR REMARK 3 S11: -0.0262 S12: 0.3013 S13: -0.7609 REMARK 3 S21: -0.2824 S22: 0.1692 S23: -0.4355 REMARK 3 S31: 0.1184 S32: 0.2393 S33: -0.1517 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 153 THROUGH 199 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.6137 -34.4745 29.0210 REMARK 3 T TENSOR REMARK 3 T11: 0.4223 T22: 0.3104 REMARK 3 T33: 0.7135 T12: -0.0580 REMARK 3 T13: 0.1426 T23: 0.0849 REMARK 3 L TENSOR REMARK 3 L11: 1.7286 L22: 1.8544 REMARK 3 L33: 1.2084 L12: 1.7628 REMARK 3 L13: -0.5582 L23: -0.3378 REMARK 3 S TENSOR REMARK 3 S11: 0.1065 S12: -0.1512 S13: -0.2002 REMARK 3 S21: 0.5311 S22: -0.0043 S23: 0.6877 REMARK 3 S31: -0.0017 S32: -0.1967 S33: -0.1020 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 200 THROUGH 233 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.6742 -23.0500 37.8115 REMARK 3 T TENSOR REMARK 3 T11: 0.5922 T22: 0.3164 REMARK 3 T33: 0.4161 T12: -0.0569 REMARK 3 T13: 0.2136 T23: 0.0535 REMARK 3 L TENSOR REMARK 3 L11: 3.8830 L22: 1.1702 REMARK 3 L33: 1.9245 L12: 1.0382 REMARK 3 L13: -0.3980 L23: -0.0060 REMARK 3 S TENSOR REMARK 3 S11: 0.1992 S12: -0.5973 S13: -0.2346 REMARK 3 S21: 0.7573 S22: -0.0397 S23: 0.3125 REMARK 3 S31: -0.2517 S32: 0.1412 S33: -0.1512 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 234 THROUGH 260 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.6738 -35.7713 40.9182 REMARK 3 T TENSOR REMARK 3 T11: 0.6568 T22: 0.4638 REMARK 3 T33: 0.7911 T12: -0.1049 REMARK 3 T13: 0.2268 T23: 0.1893 REMARK 3 L TENSOR REMARK 3 L11: 1.7333 L22: 2.4550 REMARK 3 L33: 1.4700 L12: 0.5618 REMARK 3 L13: -1.3678 L23: 0.3815 REMARK 3 S TENSOR REMARK 3 S11: 0.3437 S12: -0.4533 S13: -0.3253 REMARK 3 S21: 0.6618 S22: -0.1624 S23: 1.0099 REMARK 3 S31: 0.0993 S32: -0.3972 S33: -0.1862 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 261 THROUGH 342 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.7090 -42.0307 27.0362 REMARK 3 T TENSOR REMARK 3 T11: 0.4057 T22: 0.2852 REMARK 3 T33: 0.5460 T12: -0.0206 REMARK 3 T13: -0.0636 T23: 0.0370 REMARK 3 L TENSOR REMARK 3 L11: 2.3289 L22: 2.2923 REMARK 3 L33: 1.6132 L12: 0.0365 REMARK 3 L13: -0.8539 L23: 0.4530 REMARK 3 S TENSOR REMARK 3 S11: 0.0735 S12: -0.1449 S13: -0.4534 REMARK 3 S21: 0.2995 S22: 0.0932 S23: -0.1216 REMARK 3 S31: 0.1577 S32: 0.1692 S33: -0.1045 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 343 THROUGH 370 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.7680 -25.2194 26.3094 REMARK 3 T TENSOR REMARK 3 T11: 0.3465 T22: 0.2996 REMARK 3 T33: 0.4119 T12: -0.0521 REMARK 3 T13: 0.0102 T23: -0.0453 REMARK 3 L TENSOR REMARK 3 L11: 0.0434 L22: 4.7928 REMARK 3 L33: 2.1840 L12: -0.4422 REMARK 3 L13: -0.1074 L23: 1.6498 REMARK 3 S TENSOR REMARK 3 S11: 0.1140 S12: -0.1043 S13: -0.3162 REMARK 3 S21: 0.2905 S22: 0.3357 S23: -0.5191 REMARK 3 S31: -0.0474 S32: 0.2956 S33: -0.4487 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 371 THROUGH 474 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.9023 -10.4285 30.4064 REMARK 3 T TENSOR REMARK 3 T11: 0.4412 T22: 0.2573 REMARK 3 T33: 0.2561 T12: -0.0356 REMARK 3 T13: 0.0427 T23: -0.0049 REMARK 3 L TENSOR REMARK 3 L11: 2.0814 L22: 3.3705 REMARK 3 L33: 0.9859 L12: -0.0322 REMARK 3 L13: -0.3413 L23: -0.3729 REMARK 3 S TENSOR REMARK 3 S11: 0.1167 S12: -0.2675 S13: 0.0224 REMARK 3 S21: 0.6586 S22: -0.0926 S23: -0.0806 REMARK 3 S31: -0.0717 S32: 0.0242 S33: -0.0308 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 3 THROUGH 44 OR RESID REMARK 3 47 THROUGH 49 OR RESID 51 THROUGH 57 OR REMARK 3 RESID 59 THROUGH 64 OR RESID 66 THROUGH REMARK 3 89 OR RESID 91 THROUGH 104 OR RESID 106 REMARK 3 THROUGH 325 OR RESID 327 THROUGH 347 OR REMARK 3 RESID 349 THROUGH 396 OR RESID 398 REMARK 3 THROUGH 436 OR RESID 438 THROUGH 474 OR REMARK 3 RESID 500)) REMARK 3 SELECTION : (CHAIN B AND (RESID 3 THROUGH 44 OR RESID REMARK 3 47 THROUGH 49 OR RESID 51 THROUGH 57 OR REMARK 3 RESID 59 THROUGH 64 OR RESID 66 THROUGH REMARK 3 89 OR RESID 91 THROUGH 104 OR RESID 106 REMARK 3 THROUGH 325 OR RESID 327 THROUGH 347 OR REMARK 3 RESID 349 THROUGH 396 OR RESID 398 REMARK 3 THROUGH 436 OR RESID 438 THROUGH 474 OR REMARK 3 RESID 500)) REMARK 3 ATOM PAIRS NUMBER : 4177 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: TLS GROUPS, NCS TORSION-ANGLE REMARK 3 RESTRAINTS, AUTOMATIC OCCUPANCY REFINEMENT AND REAL-SPACE REMARK 3 REFINEMENT WERE INVOLVED, HYDROGEN ATOMS WERE ADDED TO THE FINAL REMARK 3 MODEL DURING REFINEMENT REMARK 4 REMARK 4 6I4T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-NOV-18. REMARK 100 THE DEPOSITION ID IS D_1200012634. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-SEP-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 108394 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.820 REMARK 200 RESOLUTION RANGE LOW (A) : 45.596 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 6.607 REMARK 200 R MERGE (I) : 0.09400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.0500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.82 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.5 REMARK 200 DATA REDUNDANCY IN SHELL : 6.64 REMARK 200 R MERGE FOR SHELL (I) : 1.18200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.390 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1ZMD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2 M AMMONIUM SULFATE, 2 (V/V)% PEG REMARK 280 400, 0.1 M HEPES (PH 7.5), VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 59.45750 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 84.50200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 59.45750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 84.50200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -160.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -21 REMARK 465 ALA A -20 REMARK 465 SER A -19 REMARK 465 TRP A -18 REMARK 465 SER A -17 REMARK 465 HIS A -16 REMARK 465 PRO A -15 REMARK 465 GLN A -14 REMARK 465 PHE A -13 REMARK 465 GLU A -12 REMARK 465 LYS A -11 REMARK 465 GLY A -10 REMARK 465 ALA A -9 REMARK 465 LEU A -8 REMARK 465 GLU A -7 REMARK 465 VAL A -6 REMARK 465 LEU A -5 REMARK 465 PHE A -4 REMARK 465 GLN A -3 REMARK 465 GLY A -2 REMARK 465 PRO A -1 REMARK 465 GLY A 0 REMARK 465 ALA A 1 REMARK 465 ASP A 2 REMARK 465 MET B -21 REMARK 465 ALA B -20 REMARK 465 SER B -19 REMARK 465 TRP B -18 REMARK 465 SER B -17 REMARK 465 HIS B -16 REMARK 465 PRO B -15 REMARK 465 GLN B -14 REMARK 465 PHE B -13 REMARK 465 GLU B -12 REMARK 465 LYS B -11 REMARK 465 GLY B -10 REMARK 465 ALA B -9 REMARK 465 LEU B -8 REMARK 465 GLU B -7 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 48 23.26 -140.26 REMARK 500 ASP A 163 -86.34 -113.91 REMARK 500 LYS A 265 66.20 -112.46 REMARK 500 THR A 360 -176.60 -66.45 REMARK 500 VAL B 48 23.95 -140.13 REMARK 500 ASP B 163 -88.57 -113.53 REMARK 500 LYS B 265 70.51 -109.40 REMARK 500 THR B 360 -177.64 -66.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FAD A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 1PE A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FAD B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 505 DBREF 6I4T A 1 474 UNP P09622 DLDH_HUMAN 36 509 DBREF 6I4T B 1 474 UNP P09622 DLDH_HUMAN 36 509 SEQADV 6I4T MET A -21 UNP P09622 INITIATING METHIONINE SEQADV 6I4T ALA A -20 UNP P09622 EXPRESSION TAG SEQADV 6I4T SER A -19 UNP P09622 EXPRESSION TAG SEQADV 6I4T TRP A -18 UNP P09622 EXPRESSION TAG SEQADV 6I4T SER A -17 UNP P09622 EXPRESSION TAG SEQADV 6I4T HIS A -16 UNP P09622 EXPRESSION TAG SEQADV 6I4T PRO A -15 UNP P09622 EXPRESSION TAG SEQADV 6I4T GLN A -14 UNP P09622 EXPRESSION TAG SEQADV 6I4T PHE A -13 UNP P09622 EXPRESSION TAG SEQADV 6I4T GLU A -12 UNP P09622 EXPRESSION TAG SEQADV 6I4T LYS A -11 UNP P09622 EXPRESSION TAG SEQADV 6I4T GLY A -10 UNP P09622 EXPRESSION TAG SEQADV 6I4T ALA A -9 UNP P09622 EXPRESSION TAG SEQADV 6I4T LEU A -8 UNP P09622 EXPRESSION TAG SEQADV 6I4T GLU A -7 UNP P09622 EXPRESSION TAG SEQADV 6I4T VAL A -6 UNP P09622 EXPRESSION TAG SEQADV 6I4T LEU A -5 UNP P09622 EXPRESSION TAG SEQADV 6I4T PHE A -4 UNP P09622 EXPRESSION TAG SEQADV 6I4T GLN A -3 UNP P09622 EXPRESSION TAG SEQADV 6I4T GLY A -2 UNP P09622 EXPRESSION TAG SEQADV 6I4T PRO A -1 UNP P09622 EXPRESSION TAG SEQADV 6I4T GLY A 0 UNP P09622 EXPRESSION TAG SEQADV 6I4T MET A 445 UNP P09622 ILE 480 ENGINEERED MUTATION SEQADV 6I4T MET B -21 UNP P09622 INITIATING METHIONINE SEQADV 6I4T ALA B -20 UNP P09622 EXPRESSION TAG SEQADV 6I4T SER B -19 UNP P09622 EXPRESSION TAG SEQADV 6I4T TRP B -18 UNP P09622 EXPRESSION TAG SEQADV 6I4T SER B -17 UNP P09622 EXPRESSION TAG SEQADV 6I4T HIS B -16 UNP P09622 EXPRESSION TAG SEQADV 6I4T PRO B -15 UNP P09622 EXPRESSION TAG SEQADV 6I4T GLN B -14 UNP P09622 EXPRESSION TAG SEQADV 6I4T PHE B -13 UNP P09622 EXPRESSION TAG SEQADV 6I4T GLU B -12 UNP P09622 EXPRESSION TAG SEQADV 6I4T LYS B -11 UNP P09622 EXPRESSION TAG SEQADV 6I4T GLY B -10 UNP P09622 EXPRESSION TAG SEQADV 6I4T ALA B -9 UNP P09622 EXPRESSION TAG SEQADV 6I4T LEU B -8 UNP P09622 EXPRESSION TAG SEQADV 6I4T GLU B -7 UNP P09622 EXPRESSION TAG SEQADV 6I4T VAL B -6 UNP P09622 EXPRESSION TAG SEQADV 6I4T LEU B -5 UNP P09622 EXPRESSION TAG SEQADV 6I4T PHE B -4 UNP P09622 EXPRESSION TAG SEQADV 6I4T GLN B -3 UNP P09622 EXPRESSION TAG SEQADV 6I4T GLY B -2 UNP P09622 EXPRESSION TAG SEQADV 6I4T PRO B -1 UNP P09622 EXPRESSION TAG SEQADV 6I4T GLY B 0 UNP P09622 EXPRESSION TAG SEQADV 6I4T MET B 445 UNP P09622 ILE 480 ENGINEERED MUTATION SEQRES 1 A 496 MET ALA SER TRP SER HIS PRO GLN PHE GLU LYS GLY ALA SEQRES 2 A 496 LEU GLU VAL LEU PHE GLN GLY PRO GLY ALA ASP GLN PRO SEQRES 3 A 496 ILE ASP ALA ASP VAL THR VAL ILE GLY SER GLY PRO GLY SEQRES 4 A 496 GLY TYR VAL ALA ALA ILE LYS ALA ALA GLN LEU GLY PHE SEQRES 5 A 496 LYS THR VAL CYS ILE GLU LYS ASN GLU THR LEU GLY GLY SEQRES 6 A 496 THR CYS LEU ASN VAL GLY CYS ILE PRO SER LYS ALA LEU SEQRES 7 A 496 LEU ASN ASN SER HIS TYR TYR HIS MET ALA HIS GLY LYS SEQRES 8 A 496 ASP PHE ALA SER ARG GLY ILE GLU MET SER GLU VAL ARG SEQRES 9 A 496 LEU ASN LEU ASP LYS MET MET GLU GLN LYS SER THR ALA SEQRES 10 A 496 VAL LYS ALA LEU THR GLY GLY ILE ALA HIS LEU PHE LYS SEQRES 11 A 496 GLN ASN LYS VAL VAL HIS VAL ASN GLY TYR GLY LYS ILE SEQRES 12 A 496 THR GLY LYS ASN GLN VAL THR ALA THR LYS ALA ASP GLY SEQRES 13 A 496 GLY THR GLN VAL ILE ASP THR LYS ASN ILE LEU ILE ALA SEQRES 14 A 496 THR GLY SER GLU VAL THR PRO PHE PRO GLY ILE THR ILE SEQRES 15 A 496 ASP GLU ASP THR ILE VAL SER SER THR GLY ALA LEU SER SEQRES 16 A 496 LEU LYS LYS VAL PRO GLU LYS MET VAL VAL ILE GLY ALA SEQRES 17 A 496 GLY VAL ILE GLY VAL GLU LEU GLY SER VAL TRP GLN ARG SEQRES 18 A 496 LEU GLY ALA ASP VAL THR ALA VAL GLU PHE LEU GLY HIS SEQRES 19 A 496 VAL GLY GLY VAL GLY ILE ASP MET GLU ILE SER LYS ASN SEQRES 20 A 496 PHE GLN ARG ILE LEU GLN LYS GLN GLY PHE LYS PHE LYS SEQRES 21 A 496 LEU ASN THR LYS VAL THR GLY ALA THR LYS LYS SER ASP SEQRES 22 A 496 GLY LYS ILE ASP VAL SER ILE GLU ALA ALA SER GLY GLY SEQRES 23 A 496 LYS ALA GLU VAL ILE THR CYS ASP VAL LEU LEU VAL CYS SEQRES 24 A 496 ILE GLY ARG ARG PRO PHE THR LYS ASN LEU GLY LEU GLU SEQRES 25 A 496 GLU LEU GLY ILE GLU LEU ASP PRO ARG GLY ARG ILE PRO SEQRES 26 A 496 VAL ASN THR ARG PHE GLN THR LYS ILE PRO ASN ILE TYR SEQRES 27 A 496 ALA ILE GLY ASP VAL VAL ALA GLY PRO MET LEU ALA HIS SEQRES 28 A 496 LYS ALA GLU ASP GLU GLY ILE ILE CYS VAL GLU GLY MET SEQRES 29 A 496 ALA GLY GLY ALA VAL HIS ILE ASP TYR ASN CYS VAL PRO SEQRES 30 A 496 SER VAL ILE TYR THR HIS PRO GLU VAL ALA TRP VAL GLY SEQRES 31 A 496 LYS SER GLU GLU GLN LEU LYS GLU GLU GLY ILE GLU TYR SEQRES 32 A 496 LYS VAL GLY LYS PHE PRO PHE ALA ALA ASN SER ARG ALA SEQRES 33 A 496 LYS THR ASN ALA ASP THR ASP GLY MET VAL LYS ILE LEU SEQRES 34 A 496 GLY GLN LYS SER THR ASP ARG VAL LEU GLY ALA HIS ILE SEQRES 35 A 496 LEU GLY PRO GLY ALA GLY GLU MET VAL ASN GLU ALA ALA SEQRES 36 A 496 LEU ALA LEU GLU TYR GLY ALA SER CYS GLU ASP MET ALA SEQRES 37 A 496 ARG VAL CYS HIS ALA HIS PRO THR LEU SER GLU ALA PHE SEQRES 38 A 496 ARG GLU ALA ASN LEU ALA ALA SER PHE GLY LYS SER ILE SEQRES 39 A 496 ASN PHE SEQRES 1 B 496 MET ALA SER TRP SER HIS PRO GLN PHE GLU LYS GLY ALA SEQRES 2 B 496 LEU GLU VAL LEU PHE GLN GLY PRO GLY ALA ASP GLN PRO SEQRES 3 B 496 ILE ASP ALA ASP VAL THR VAL ILE GLY SER GLY PRO GLY SEQRES 4 B 496 GLY TYR VAL ALA ALA ILE LYS ALA ALA GLN LEU GLY PHE SEQRES 5 B 496 LYS THR VAL CYS ILE GLU LYS ASN GLU THR LEU GLY GLY SEQRES 6 B 496 THR CYS LEU ASN VAL GLY CYS ILE PRO SER LYS ALA LEU SEQRES 7 B 496 LEU ASN ASN SER HIS TYR TYR HIS MET ALA HIS GLY LYS SEQRES 8 B 496 ASP PHE ALA SER ARG GLY ILE GLU MET SER GLU VAL ARG SEQRES 9 B 496 LEU ASN LEU ASP LYS MET MET GLU GLN LYS SER THR ALA SEQRES 10 B 496 VAL LYS ALA LEU THR GLY GLY ILE ALA HIS LEU PHE LYS SEQRES 11 B 496 GLN ASN LYS VAL VAL HIS VAL ASN GLY TYR GLY LYS ILE SEQRES 12 B 496 THR GLY LYS ASN GLN VAL THR ALA THR LYS ALA ASP GLY SEQRES 13 B 496 GLY THR GLN VAL ILE ASP THR LYS ASN ILE LEU ILE ALA SEQRES 14 B 496 THR GLY SER GLU VAL THR PRO PHE PRO GLY ILE THR ILE SEQRES 15 B 496 ASP GLU ASP THR ILE VAL SER SER THR GLY ALA LEU SER SEQRES 16 B 496 LEU LYS LYS VAL PRO GLU LYS MET VAL VAL ILE GLY ALA SEQRES 17 B 496 GLY VAL ILE GLY VAL GLU LEU GLY SER VAL TRP GLN ARG SEQRES 18 B 496 LEU GLY ALA ASP VAL THR ALA VAL GLU PHE LEU GLY HIS SEQRES 19 B 496 VAL GLY GLY VAL GLY ILE ASP MET GLU ILE SER LYS ASN SEQRES 20 B 496 PHE GLN ARG ILE LEU GLN LYS GLN GLY PHE LYS PHE LYS SEQRES 21 B 496 LEU ASN THR LYS VAL THR GLY ALA THR LYS LYS SER ASP SEQRES 22 B 496 GLY LYS ILE ASP VAL SER ILE GLU ALA ALA SER GLY GLY SEQRES 23 B 496 LYS ALA GLU VAL ILE THR CYS ASP VAL LEU LEU VAL CYS SEQRES 24 B 496 ILE GLY ARG ARG PRO PHE THR LYS ASN LEU GLY LEU GLU SEQRES 25 B 496 GLU LEU GLY ILE GLU LEU ASP PRO ARG GLY ARG ILE PRO SEQRES 26 B 496 VAL ASN THR ARG PHE GLN THR LYS ILE PRO ASN ILE TYR SEQRES 27 B 496 ALA ILE GLY ASP VAL VAL ALA GLY PRO MET LEU ALA HIS SEQRES 28 B 496 LYS ALA GLU ASP GLU GLY ILE ILE CYS VAL GLU GLY MET SEQRES 29 B 496 ALA GLY GLY ALA VAL HIS ILE ASP TYR ASN CYS VAL PRO SEQRES 30 B 496 SER VAL ILE TYR THR HIS PRO GLU VAL ALA TRP VAL GLY SEQRES 31 B 496 LYS SER GLU GLU GLN LEU LYS GLU GLU GLY ILE GLU TYR SEQRES 32 B 496 LYS VAL GLY LYS PHE PRO PHE ALA ALA ASN SER ARG ALA SEQRES 33 B 496 LYS THR ASN ALA ASP THR ASP GLY MET VAL LYS ILE LEU SEQRES 34 B 496 GLY GLN LYS SER THR ASP ARG VAL LEU GLY ALA HIS ILE SEQRES 35 B 496 LEU GLY PRO GLY ALA GLY GLU MET VAL ASN GLU ALA ALA SEQRES 36 B 496 LEU ALA LEU GLU TYR GLY ALA SER CYS GLU ASP MET ALA SEQRES 37 B 496 ARG VAL CYS HIS ALA HIS PRO THR LEU SER GLU ALA PHE SEQRES 38 B 496 ARG GLU ALA ASN LEU ALA ALA SER PHE GLY LYS SER ILE SEQRES 39 B 496 ASN PHE HET FAD A 501 84 HET SO4 A 502 5 HET SO4 A 503 5 HET SO4 A 504 5 HET SO4 A 505 5 HET 1PE A 506 38 HET FAD B 501 84 HET SO4 B 502 5 HET SO4 B 503 5 HET SO4 B 504 5 HET SO4 B 505 5 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM SO4 SULFATE ION HETNAM 1PE PENTAETHYLENE GLYCOL HETSYN 1PE PEG400 FORMUL 3 FAD 2(C27 H33 N9 O15 P2) FORMUL 4 SO4 8(O4 S 2-) FORMUL 8 1PE C10 H22 O6 FORMUL 14 HOH *411(H2 O) HELIX 1 AA1 GLY A 15 LEU A 28 1 14 HELIX 2 AA2 GLY A 42 GLY A 49 1 8 HELIX 3 AA3 GLY A 49 GLY A 68 1 20 HELIX 4 AA4 LYS A 69 ARG A 74 1 6 HELIX 5 AA5 ASN A 84 LYS A 111 1 28 HELIX 6 AA6 SER A 167 LEU A 172 1 6 HELIX 7 AA7 GLY A 187 LEU A 200 1 14 HELIX 8 AA8 ASP A 219 GLY A 234 1 16 HELIX 9 AA9 GLY A 288 GLY A 293 1 6 HELIX 10 AB1 GLY A 319 VAL A 322 5 4 HELIX 11 AB2 LEU A 327 ALA A 343 1 17 HELIX 12 AB3 ASP A 350 VAL A 354 5 5 HELIX 13 AB4 SER A 370 GLY A 378 1 9 HELIX 14 AB5 ASN A 391 ALA A 398 1 8 HELIX 15 AB6 GLY A 424 TYR A 438 1 15 HELIX 16 AB7 SER A 441 VAL A 448 1 8 HELIX 17 AB8 SER A 456 GLY A 469 1 14 HELIX 18 AB9 GLY B 15 LEU B 28 1 14 HELIX 19 AC1 GLY B 42 GLY B 49 1 8 HELIX 20 AC2 GLY B 49 GLY B 68 1 20 HELIX 21 AC3 LYS B 69 ARG B 74 1 6 HELIX 22 AC4 ASN B 84 ASN B 110 1 27 HELIX 23 AC5 SER B 167 LEU B 172 1 6 HELIX 24 AC6 GLY B 187 LEU B 200 1 14 HELIX 25 AC7 ASP B 219 GLY B 234 1 16 HELIX 26 AC8 GLY B 288 GLY B 293 1 6 HELIX 27 AC9 GLY B 319 VAL B 322 5 4 HELIX 28 AD1 LEU B 327 ALA B 343 1 17 HELIX 29 AD2 ASP B 350 VAL B 354 5 5 HELIX 30 AD3 SER B 370 GLY B 378 1 9 HELIX 31 AD4 ASN B 391 ASN B 397 1 7 HELIX 32 AD5 GLY B 424 TYR B 438 1 15 HELIX 33 AD6 SER B 441 VAL B 448 1 8 HELIX 34 AD7 LEU B 455 GLY B 469 1 15 SHEET 1 AA1 6 VAL A 113 ASN A 116 0 SHEET 2 AA1 6 THR A 32 GLU A 36 1 N CYS A 34 O VAL A 113 SHEET 3 AA1 6 ILE A 5 ILE A 12 1 N VAL A 11 O VAL A 33 SHEET 4 AA1 6 THR A 136 ILE A 146 1 O LEU A 145 N THR A 10 SHEET 5 AA1 6 GLN A 126 THR A 130 -1 N VAL A 127 O ILE A 139 SHEET 6 AA1 6 TYR A 118 GLY A 123 -1 N TYR A 118 O THR A 130 SHEET 1 AA2 5 VAL A 113 ASN A 116 0 SHEET 2 AA2 5 THR A 32 GLU A 36 1 N CYS A 34 O VAL A 113 SHEET 3 AA2 5 ILE A 5 ILE A 12 1 N VAL A 11 O VAL A 33 SHEET 4 AA2 5 THR A 136 ILE A 146 1 O LEU A 145 N THR A 10 SHEET 5 AA2 5 ILE A 315 ALA A 317 1 O TYR A 316 N ILE A 146 SHEET 1 AA3 2 ILE A 76 MET A 78 0 SHEET 2 AA3 2 VAL B 81 LEU B 83 -1 O ARG B 82 N GLU A 77 SHEET 1 AA4 2 VAL A 81 LEU A 83 0 SHEET 2 AA4 2 ILE B 76 MET B 78 -1 O GLU B 77 N ARG A 82 SHEET 1 AA5 2 SER A 150 VAL A 152 0 SHEET 2 AA5 2 ARG A 280 PRO A 282 -1 O ARG A 281 N GLU A 151 SHEET 1 AA6 5 ILE A 165 VAL A 166 0 SHEET 2 AA6 5 VAL A 273 VAL A 276 1 O VAL A 276 N VAL A 166 SHEET 3 AA6 5 LYS A 180 ILE A 184 1 N ILE A 184 O LEU A 275 SHEET 4 AA6 5 ASP A 203 VAL A 207 1 O VAL A 207 N VAL A 183 SHEET 5 AA6 5 LYS A 236 LYS A 238 1 O LYS A 238 N ALA A 206 SHEET 1 AA7 3 THR A 241 LYS A 248 0 SHEET 2 AA7 3 ILE A 254 ALA A 260 -1 O GLU A 259 N LYS A 242 SHEET 3 AA7 3 GLU A 267 CYS A 271 -1 O ILE A 269 N VAL A 256 SHEET 1 AA8 5 SER A 356 ILE A 358 0 SHEET 2 AA8 5 GLU A 363 GLY A 368 -1 O VAL A 364 N ILE A 358 SHEET 3 AA8 5 VAL A 415 GLY A 422 -1 O ILE A 420 N ALA A 365 SHEET 4 AA8 5 MET A 403 GLN A 409 -1 N LEU A 407 O LEU A 416 SHEET 5 AA8 5 TYR A 381 PRO A 387 -1 N GLY A 384 O ILE A 406 SHEET 1 AA9 7 PHE B -4 GLN B -3 0 SHEET 2 AA9 7 VAL B 113 ASN B 116 1 O HIS B 114 N GLN B -3 SHEET 3 AA9 7 THR B 32 GLU B 36 1 N CYS B 34 O VAL B 113 SHEET 4 AA9 7 ILE B 5 ILE B 12 1 N VAL B 11 O VAL B 33 SHEET 5 AA9 7 THR B 136 ILE B 146 1 O LEU B 145 N THR B 10 SHEET 6 AA9 7 GLN B 126 THR B 130 -1 N VAL B 127 O ILE B 139 SHEET 7 AA9 7 TYR B 118 GLY B 123 -1 N LYS B 120 O THR B 128 SHEET 1 AB1 6 PHE B -4 GLN B -3 0 SHEET 2 AB1 6 VAL B 113 ASN B 116 1 O HIS B 114 N GLN B -3 SHEET 3 AB1 6 THR B 32 GLU B 36 1 N CYS B 34 O VAL B 113 SHEET 4 AB1 6 ILE B 5 ILE B 12 1 N VAL B 11 O VAL B 33 SHEET 5 AB1 6 THR B 136 ILE B 146 1 O LEU B 145 N THR B 10 SHEET 6 AB1 6 ILE B 315 ALA B 317 1 O TYR B 316 N ILE B 146 SHEET 1 AB2 2 SER B 150 VAL B 152 0 SHEET 2 AB2 2 ARG B 280 PRO B 282 -1 O ARG B 281 N GLU B 151 SHEET 1 AB3 5 ILE B 165 VAL B 166 0 SHEET 2 AB3 5 VAL B 273 VAL B 276 1 O VAL B 276 N VAL B 166 SHEET 3 AB3 5 LYS B 180 ILE B 184 1 N ILE B 184 O LEU B 275 SHEET 4 AB3 5 ASP B 203 VAL B 207 1 O VAL B 207 N VAL B 183 SHEET 5 AB3 5 LYS B 236 LYS B 238 1 O LYS B 236 N ALA B 206 SHEET 1 AB4 3 THR B 241 LYS B 248 0 SHEET 2 AB4 3 ILE B 254 ALA B 260 -1 O SER B 257 N THR B 244 SHEET 3 AB4 3 GLU B 267 CYS B 271 -1 O CYS B 271 N ILE B 254 SHEET 1 AB5 5 SER B 356 ILE B 358 0 SHEET 2 AB5 5 GLU B 363 GLY B 368 -1 O VAL B 364 N ILE B 358 SHEET 3 AB5 5 VAL B 415 GLY B 422 -1 O ILE B 420 N ALA B 365 SHEET 4 AB5 5 MET B 403 GLN B 409 -1 N LEU B 407 O LEU B 416 SHEET 5 AB5 5 TYR B 381 PRO B 387 -1 N GLY B 384 O ILE B 406 SSBOND 1 CYS A 45 CYS A 50 1555 1555 2.04 SSBOND 2 CYS B 45 CYS B 50 1555 1555 2.04 CISPEP 1 HIS A 361 PRO A 362 0 2.44 CISPEP 2 HIS A 452 PRO A 453 0 -3.74 CISPEP 3 HIS B 361 PRO B 362 0 2.67 CISPEP 4 HIS B 452 PRO B 453 0 -4.91 SITE 1 AC1 36 ILE A 12 GLY A 13 GLY A 15 PRO A 16 SITE 2 AC1 36 GLY A 17 GLU A 36 LYS A 37 ASN A 38 SITE 3 AC1 36 GLY A 43 THR A 44 CYS A 45 GLY A 49 SITE 4 AC1 36 CYS A 50 LYS A 54 GLY A 117 TYR A 118 SITE 5 AC1 36 GLY A 119 ALA A 147 THR A 148 GLY A 149 SITE 6 AC1 36 SER A 150 ILE A 189 ARG A 280 PHE A 283 SITE 7 AC1 36 GLY A 319 ASP A 320 MET A 326 LEU A 327 SITE 8 AC1 36 ALA A 328 HIS A 329 TYR A 359 HOH A 645 SITE 9 AC1 36 HOH A 661 HOH A 668 HOH A 742 HIS B 452 SITE 1 AC2 4 ARG A 299 ARG A 301 ALA A 323 GLY A 324 SITE 1 AC3 8 THR A 284 ASN A 286 LEU A 287 GLY A 288 SITE 2 AC3 8 LEU A 289 GLU A 290 HOH A 717 HOH A 724 SITE 1 AC4 4 LEU A 210 GLY A 211 HIS A 212 MET A 220 SITE 1 AC5 5 HIS A 64 GLY A 68 LYS A 69 HOH A 604 SITE 2 AC5 5 HOH A 740 SITE 1 AC6 10 LYS A 24 ASP A 333 ILE A 336 ILE A 337 SITE 2 AC6 10 GLU A 340 HOH A 608 ALA B 446 ARG B 447 SITE 3 AC6 10 ARG B 460 LEU B 464 SITE 1 AC7 39 HIS A 452 ILE B 12 GLY B 13 GLY B 15 SITE 2 AC7 39 PRO B 16 GLY B 17 GLU B 36 LYS B 37 SITE 3 AC7 39 ASN B 38 GLY B 43 THR B 44 CYS B 45 SITE 4 AC7 39 VAL B 48 GLY B 49 CYS B 50 LYS B 54 SITE 5 AC7 39 GLY B 117 TYR B 118 GLY B 119 ALA B 147 SITE 6 AC7 39 THR B 148 GLY B 149 SER B 150 ILE B 189 SITE 7 AC7 39 ARG B 280 PHE B 283 GLY B 319 ASP B 320 SITE 8 AC7 39 MET B 326 LEU B 327 ALA B 328 HIS B 329 SITE 9 AC7 39 ALA B 331 TYR B 359 HOH B 606 HOH B 643 SITE 10 AC7 39 HOH B 651 HOH B 666 HOH B 704 SITE 1 AC8 6 THR B 284 ASN B 286 LEU B 287 GLY B 288 SITE 2 AC8 6 LEU B 289 GLU B 290 SITE 1 AC9 4 ARG B 299 ARG B 301 ALA B 323 GLY B 324 SITE 1 AD1 3 LEU B 210 GLY B 211 HIS B 212 SITE 1 AD2 3 HIS B 64 LYS B 69 HOH B 602 CRYST1 118.915 169.004 60.831 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008409 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005917 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016439 0.00000