HEADER CHAPERONE 13-NOV-18 6I57 TITLE NMR STRUCTURE OF THE THIRD TPR DOMAIN OF THE HUMAN SPAG1 PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPERM-ASSOCIATED ANTIGEN 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HSD-3.8,INFERTILITY-RELATED SPERM PROTEIN SPAG-1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SPAG1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS HSP70, HSP90, ATPASE, GTPASE, EEVD, MD SIMULATION, RUVBL, R2TP, R2SP, KEYWDS 2 CILIA, DYNEIN, ASSEMBLY FACTOR, CHAPERONE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR M.E.CHAGOT,M.QUINTERNET REVDAT 3 14-JUN-23 6I57 1 REMARK REVDAT 2 26-JUN-19 6I57 1 JRNL REVDAT 1 05-JUN-19 6I57 0 JRNL AUTH M.E.CHAGOT,R.DOS SANTOS MORAIS,S.DERMOUCHE,D.LEFEBVRE, JRNL AUTH 2 X.MANIVAL,C.CHIPOT,F.DEHEZ,M.QUINTERNET JRNL TITL BINDING PROPERTIES OF THE QUATERNARY ASSEMBLY PROTEIN SPAG1. JRNL REF BIOCHEM.J. V. 476 1679 2019 JRNL REFN ESSN 1470-8728 JRNL PMID 31118266 JRNL DOI 10.1042/BCJ20190198 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6I57 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-NOV-18. REMARK 100 THE DEPOSITION ID IS D_1200012842. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 6.4 REMARK 210 IONIC STRENGTH : 150 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1 MM [U-13C; U-15N] SPAG1-TPR3, REMARK 210 150 MM SODIUM CHLORIDE, 10 MM REMARK 210 SODIUM PHOSPHATE, 0.5 MM TCEP, REMARK 210 95% H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D CBCA(CO)NH; 3D HNCA; 3D REMARK 210 HNCACB; 3D HBHA(CO)NH; 3D H(CCO) REMARK 210 NH; 3D HNCO; 3D HCCH-TOCSY; 3D REMARK 210 HNHA; 3D 1H-15N NOESY; 3D 1H-13C REMARK 210 NOESY; 2D 1H-15N HSQC; 2D 1H-13C REMARK 210 HSQC; 2D 1H-1H NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN 3.2, CARA, CYANA, TALOS, REMARK 210 PREDITOR REMARK 210 METHOD USED : MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7160 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ1 LYS A 702 OE1 GLU A 733 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 638 70.94 -107.20 REMARK 500 2 HIS A 620 71.12 55.33 REMARK 500 2 ASN A 638 68.97 -111.80 REMARK 500 2 ASN A 706 63.18 -100.95 REMARK 500 3 MET A 621 121.39 71.51 REMARK 500 3 LYS A 637 30.81 70.90 REMARK 500 3 ASN A 638 67.82 -107.96 REMARK 500 3 GLN A 672 62.05 -109.06 REMARK 500 4 GLN A 672 64.16 -106.49 REMARK 500 5 ASN A 638 69.32 -109.50 REMARK 500 5 GLN A 672 67.93 -107.70 REMARK 500 6 ASN A 638 64.15 -101.59 REMARK 500 7 MET A 621 136.16 70.34 REMARK 500 7 ASN A 638 56.84 -100.53 REMARK 500 7 ASN A 706 66.80 -101.80 REMARK 500 8 ASN A 638 61.50 -103.56 REMARK 500 8 ASN A 706 71.30 -101.77 REMARK 500 9 GLN A 672 65.42 -107.53 REMARK 500 10 MET A 621 106.26 62.64 REMARK 500 10 ASN A 638 67.45 -101.63 REMARK 500 10 GLN A 672 57.69 -113.55 REMARK 500 10 ASN A 706 69.17 -100.61 REMARK 500 11 ASN A 638 63.34 -112.30 REMARK 500 11 GLN A 672 61.51 -103.97 REMARK 500 11 ASN A 706 67.37 -106.01 REMARK 500 12 MET A 621 175.27 65.46 REMARK 500 12 ASN A 638 73.29 -112.18 REMARK 500 12 GLN A 672 67.10 -106.97 REMARK 500 12 ASN A 706 69.18 -102.73 REMARK 500 13 MET A 621 116.22 70.20 REMARK 500 13 ASN A 706 73.44 -104.16 REMARK 500 14 ASN A 638 68.02 -107.61 REMARK 500 15 ASN A 638 65.45 -103.82 REMARK 500 15 GLN A 672 77.77 -103.96 REMARK 500 16 ASN A 638 73.15 -104.99 REMARK 500 16 ASN A 706 65.91 -106.62 REMARK 500 17 ASN A 638 65.03 -106.22 REMARK 500 17 GLN A 672 60.14 -110.11 REMARK 500 17 ASN A 706 67.66 -105.17 REMARK 500 18 ASN A 638 76.90 -104.12 REMARK 500 18 GLN A 672 55.96 -100.89 REMARK 500 19 MET A 621 113.01 71.81 REMARK 500 19 ASN A 638 73.03 -108.65 REMARK 500 19 GLN A 672 65.77 -100.79 REMARK 500 20 ASN A 638 69.46 -107.88 REMARK 500 20 GLN A 672 67.53 -110.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 34329 RELATED DB: BMRB REMARK 900 NMR STRUCTURE OF THE THIRD TPR DOMAIN OF THE HUMAN SPAG1 PROTEIN DBREF 6I57 A 622 742 UNP Q07617 SPAG1_HUMAN 622 742 SEQADV 6I57 GLY A 618 UNP Q07617 EXPRESSION TAG SEQADV 6I57 PRO A 619 UNP Q07617 EXPRESSION TAG SEQADV 6I57 HIS A 620 UNP Q07617 EXPRESSION TAG SEQADV 6I57 MET A 621 UNP Q07617 EXPRESSION TAG SEQRES 1 A 125 GLY PRO HIS MET THR PHE LYS ALA LEU LYS GLU GLU GLY SEQRES 2 A 125 ASN GLN CYS VAL ASN ASP LYS ASN TYR LYS ASP ALA LEU SEQRES 3 A 125 SER LYS TYR SER GLU CYS LEU LYS ILE ASN ASN LYS GLU SEQRES 4 A 125 CYS ALA ILE TYR THR ASN ARG ALA LEU CYS TYR LEU LYS SEQRES 5 A 125 LEU CYS GLN PHE GLU GLU ALA LYS GLN ASP CYS ASP GLN SEQRES 6 A 125 ALA LEU GLN LEU ALA ASP GLY ASN VAL LYS ALA PHE TYR SEQRES 7 A 125 ARG ARG ALA LEU ALA HIS LYS GLY LEU LYS ASN TYR GLN SEQRES 8 A 125 LYS SER LEU ILE ASP LEU ASN LYS VAL ILE LEU LEU ASP SEQRES 9 A 125 PRO SER ILE ILE GLU ALA LYS MET GLU LEU GLU GLU VAL SEQRES 10 A 125 THR ARG LEU LEU ASN LEU LYS ASP HELIX 1 AA1 THR A 622 ASP A 636 1 15 HELIX 2 AA2 ASN A 638 ASN A 653 1 16 HELIX 3 AA3 GLU A 656 LEU A 670 1 15 HELIX 4 AA4 GLN A 672 ALA A 687 1 16 HELIX 5 AA5 ASN A 690 LEU A 704 1 15 HELIX 6 AA6 ASN A 706 ASP A 721 1 16 HELIX 7 AA7 ILE A 724 ASN A 739 1 16 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1