HEADER HYDROLASE 13-NOV-18 6I5D TITLE CRYSTAL STRUCTURE OF AN OXA-48 BETA-LACTAMASE SYNTHETIC MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-LACTAMASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.5.2.6; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: KLEBSIELLA PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 573; SOURCE 4 GENE: BLA OXA-48, BLA_2, BLA_4, BLAOXA-48, KPE71T_00045, SOURCE 5 SAMEA3673128_05462, SAMEA3729690_05506; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS CLASS D BETA-LACTAMASE OXA-48 MUTANT, ANTIBIOTIC, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR A.ZAVALA,P.RETAILLEAU,L.DABOS,T.NAAS,B.IORGA REVDAT 2 24-JAN-24 6I5D 1 REMARK REVDAT 1 04-MAR-20 6I5D 0 JRNL AUTH L.DABOS,A.ZAVALA,L.DORTET,R.A.BONNIN,O.BECKSTEIN, JRNL AUTH 2 P.RETAILLEAU,B.I.IORGA,T.NAAS JRNL TITL SUBSTRATE SPECIFICITY OF AN OXA-48 BETA-LACTAMASE SYNTHETIC JRNL TITL 2 MUTANT JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.3 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.62 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 58275 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.185 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.970 REMARK 3 FREE R VALUE TEST SET COUNT : 2894 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.79 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.74 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 4311 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2202 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4091 REMARK 3 BIN R VALUE (WORKING SET) : 0.2195 REMARK 3 BIN FREE R VALUE : 0.2326 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.10 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 220 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3989 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 155 REMARK 3 SOLVENT ATOMS : 376 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.75 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.21 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -8.78990 REMARK 3 B22 (A**2) : 2.74940 REMARK 3 B33 (A**2) : 6.04040 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.210 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.107 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.094 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.103 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.092 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 4377 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 5901 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1597 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 126 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 641 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 4377 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 540 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 5384 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 0.96 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.20 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 17.01 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): -12.0465 7.0607 -22.8043 REMARK 3 T TENSOR REMARK 3 T11: -0.0506 T22: -0.0775 REMARK 3 T33: -0.0556 T12: -0.0092 REMARK 3 T13: 0.0070 T23: -0.0130 REMARK 3 L TENSOR REMARK 3 L11: 0.7102 L22: 1.1115 REMARK 3 L33: 1.7545 L12: 0.1196 REMARK 3 L13: 0.3273 L23: 0.3895 REMARK 3 S TENSOR REMARK 3 S11: 0.0141 S12: 0.0064 S13: 0.0179 REMARK 3 S21: 0.0310 S22: 0.0037 S23: -0.0216 REMARK 3 S31: -0.0554 S32: 0.0891 S33: -0.0177 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): -7.2580 -7.9068 -50.9727 REMARK 3 T TENSOR REMARK 3 T11: -0.0587 T22: -0.0468 REMARK 3 T33: -0.0658 T12: -0.0223 REMARK 3 T13: 0.0267 T23: -0.0289 REMARK 3 L TENSOR REMARK 3 L11: 0.9952 L22: 1.1096 REMARK 3 L33: 1.3052 L12: 0.0676 REMARK 3 L13: -0.0406 L23: 0.0081 REMARK 3 S TENSOR REMARK 3 S11: -0.0541 S12: 0.0330 S13: 0.0175 REMARK 3 S21: -0.1498 S22: 0.1038 S23: -0.1339 REMARK 3 S31: -0.0607 S32: 0.1917 S33: -0.0497 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6I5D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-NOV-18. REMARK 100 THE DEPOSITION ID IS D_1200012845. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-APR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98011 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS 20160617 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.29 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 58856 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 74.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.04300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.44000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.2 REMARK 200 STARTING MODEL: 3HBR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M NANO3; 20% PEG3350 PROTEIN STORED REMARK 280 AT 12.5MG/ML IN BUFFER: SODIUM PHOSPHATE 0.1M PH=7.0; K2SO4 50MM, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.78550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 63.19550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 46.49200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 63.19550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.78550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 46.49200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19790 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 20 REMARK 465 VAL A 21 REMARK 465 GLU A 266 REMARK 465 HIS A 267 REMARK 465 HIS A 268 REMARK 465 HIS A 269 REMARK 465 HIS A 270 REMARK 465 HIS A 271 REMARK 465 HIS A 272 REMARK 465 HIS A 273 REMARK 465 HIS A 274 REMARK 465 MET B 20 REMARK 465 VAL B 21 REMARK 465 ALA B 22 REMARK 465 GLU B 266 REMARK 465 HIS B 267 REMARK 465 HIS B 268 REMARK 465 HIS B 269 REMARK 465 HIS B 270 REMARK 465 HIS B 271 REMARK 465 HIS B 272 REMARK 465 HIS B 273 REMARK 465 HIS B 274 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 69 -128.43 48.02 REMARK 500 GLU A 147 18.90 57.37 REMARK 500 ASP A 159 18.56 -147.31 REMARK 500 ALA A 207 -93.27 -154.12 REMARK 500 SER A 243 -32.75 -152.23 REMARK 500 ALA B 69 -125.52 47.80 REMARK 500 GLU B 147 19.89 57.97 REMARK 500 SER B 155 3.51 -153.48 REMARK 500 ASP B 159 19.35 -149.25 REMARK 500 ALA B 207 -93.56 -153.91 REMARK 500 PRO B 241 -72.73 -87.99 REMARK 500 SER B 243 169.99 64.05 REMARK 500 ASP B 244 86.33 -67.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NO3 A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NO3 A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NO3 A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NO3 A 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NO3 A 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 310 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 311 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 312 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 313 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 314 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 315 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 316 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 317 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 310 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 311 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NO3 B 312 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 313 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 314 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 315 DBREF 6I5D A 21 264 UNP Q6XEC0 Q6XEC0_KLEPN 21 265 DBREF 6I5D B 21 264 UNP Q6XEC0 Q6XEC0_KLEPN 21 265 SEQADV 6I5D MET A 20 UNP Q6XEC0 INITIATING METHIONINE SEQADV 6I5D A UNP Q6XEC0 PRO 217 DELETION SEQADV 6I5D PHE A 265 UNP Q6XEC0 EXPRESSION TAG SEQADV 6I5D GLU A 266 UNP Q6XEC0 EXPRESSION TAG SEQADV 6I5D HIS A 267 UNP Q6XEC0 EXPRESSION TAG SEQADV 6I5D HIS A 268 UNP Q6XEC0 EXPRESSION TAG SEQADV 6I5D HIS A 269 UNP Q6XEC0 EXPRESSION TAG SEQADV 6I5D HIS A 270 UNP Q6XEC0 EXPRESSION TAG SEQADV 6I5D HIS A 271 UNP Q6XEC0 EXPRESSION TAG SEQADV 6I5D HIS A 272 UNP Q6XEC0 EXPRESSION TAG SEQADV 6I5D HIS A 273 UNP Q6XEC0 EXPRESSION TAG SEQADV 6I5D HIS A 274 UNP Q6XEC0 EXPRESSION TAG SEQADV 6I5D MET B 20 UNP Q6XEC0 INITIATING METHIONINE SEQADV 6I5D B UNP Q6XEC0 PRO 217 DELETION SEQADV 6I5D PHE B 265 UNP Q6XEC0 EXPRESSION TAG SEQADV 6I5D GLU B 266 UNP Q6XEC0 EXPRESSION TAG SEQADV 6I5D HIS B 267 UNP Q6XEC0 EXPRESSION TAG SEQADV 6I5D HIS B 268 UNP Q6XEC0 EXPRESSION TAG SEQADV 6I5D HIS B 269 UNP Q6XEC0 EXPRESSION TAG SEQADV 6I5D HIS B 270 UNP Q6XEC0 EXPRESSION TAG SEQADV 6I5D HIS B 271 UNP Q6XEC0 EXPRESSION TAG SEQADV 6I5D HIS B 272 UNP Q6XEC0 EXPRESSION TAG SEQADV 6I5D HIS B 273 UNP Q6XEC0 EXPRESSION TAG SEQADV 6I5D HIS B 274 UNP Q6XEC0 EXPRESSION TAG SEQRES 1 A 255 MET VAL ALA LYS GLU TRP GLN GLU ASN LYS SER TRP ASN SEQRES 2 A 255 ALA HIS PHE THR GLU HIS LYS SER GLN GLY VAL VAL VAL SEQRES 3 A 255 LEU TRP ASN GLU ASN LYS GLN GLN GLY PHE THR ASN ASN SEQRES 4 A 255 LEU LYS ARG ALA ASN GLN ALA PHE LEU PRO ALA SER THR SEQRES 5 A 255 PHE LYS ILE PRO ASN SER LEU ILE ALA LEU ASP LEU GLY SEQRES 6 A 255 VAL VAL LYS ASP GLU HIS GLN VAL PHE LYS TRP ASP GLY SEQRES 7 A 255 GLN THR ARG ASP ILE ALA THR TRP ASN ARG ASP HIS ASN SEQRES 8 A 255 LEU ILE THR ALA MET LYS TYR SER VAL VAL PRO VAL TYR SEQRES 9 A 255 GLN GLU PHE ALA ARG GLN ILE GLY GLU ALA ARG MET SER SEQRES 10 A 255 LYS MET LEU HIS ALA PHE ASP TYR GLY ASN GLU ASP ILE SEQRES 11 A 255 SER GLY ASN VAL ASP SER PHE TRP LEU ASP GLY GLY ILE SEQRES 12 A 255 ARG ILE SER ALA THR GLU GLN ILE SER PHE LEU ARG LYS SEQRES 13 A 255 LEU TYR HIS ASN LYS LEU HIS VAL SER GLU ARG SER GLN SEQRES 14 A 255 ARG ILE VAL LYS GLN ALA MET LEU THR GLU ALA ASN GLY SEQRES 15 A 255 ASP TYR ILE ILE ARG ALA LYS THR GLY TYR SER THR ARG SEQRES 16 A 255 ILE GLU LYS ILE GLY TRP TRP VAL GLY TRP VAL GLU LEU SEQRES 17 A 255 ASP ASP ASN VAL TRP PHE PHE ALA MET ASN MET ASP MET SEQRES 18 A 255 PRO THR SER ASP GLY LEU GLY LEU ARG GLN ALA ILE THR SEQRES 19 A 255 LYS GLU VAL LEU LYS GLN GLU LYS ILE ILE PRO PHE GLU SEQRES 20 A 255 HIS HIS HIS HIS HIS HIS HIS HIS SEQRES 1 B 255 MET VAL ALA LYS GLU TRP GLN GLU ASN LYS SER TRP ASN SEQRES 2 B 255 ALA HIS PHE THR GLU HIS LYS SER GLN GLY VAL VAL VAL SEQRES 3 B 255 LEU TRP ASN GLU ASN LYS GLN GLN GLY PHE THR ASN ASN SEQRES 4 B 255 LEU LYS ARG ALA ASN GLN ALA PHE LEU PRO ALA SER THR SEQRES 5 B 255 PHE LYS ILE PRO ASN SER LEU ILE ALA LEU ASP LEU GLY SEQRES 6 B 255 VAL VAL LYS ASP GLU HIS GLN VAL PHE LYS TRP ASP GLY SEQRES 7 B 255 GLN THR ARG ASP ILE ALA THR TRP ASN ARG ASP HIS ASN SEQRES 8 B 255 LEU ILE THR ALA MET LYS TYR SER VAL VAL PRO VAL TYR SEQRES 9 B 255 GLN GLU PHE ALA ARG GLN ILE GLY GLU ALA ARG MET SER SEQRES 10 B 255 LYS MET LEU HIS ALA PHE ASP TYR GLY ASN GLU ASP ILE SEQRES 11 B 255 SER GLY ASN VAL ASP SER PHE TRP LEU ASP GLY GLY ILE SEQRES 12 B 255 ARG ILE SER ALA THR GLU GLN ILE SER PHE LEU ARG LYS SEQRES 13 B 255 LEU TYR HIS ASN LYS LEU HIS VAL SER GLU ARG SER GLN SEQRES 14 B 255 ARG ILE VAL LYS GLN ALA MET LEU THR GLU ALA ASN GLY SEQRES 15 B 255 ASP TYR ILE ILE ARG ALA LYS THR GLY TYR SER THR ARG SEQRES 16 B 255 ILE GLU LYS ILE GLY TRP TRP VAL GLY TRP VAL GLU LEU SEQRES 17 B 255 ASP ASP ASN VAL TRP PHE PHE ALA MET ASN MET ASP MET SEQRES 18 B 255 PRO THR SER ASP GLY LEU GLY LEU ARG GLN ALA ILE THR SEQRES 19 B 255 LYS GLU VAL LEU LYS GLN GLU LYS ILE ILE PRO PHE GLU SEQRES 20 B 255 HIS HIS HIS HIS HIS HIS HIS HIS HET GOL A 301 6 HET GOL A 302 6 HET GOL A 303 6 HET CL A 304 1 HET NO3 A 305 4 HET NO3 A 306 4 HET NO3 A 307 4 HET NO3 A 308 4 HET NO3 A 309 4 HET EDO A 310 4 HET EDO A 311 4 HET EDO A 312 4 HET EDO A 313 4 HET EDO A 314 4 HET EDO A 315 4 HET EDO A 316 5 HET PEG A 317 7 HET PO4 B 301 5 HET GOL B 302 6 HET GOL B 303 6 HET GOL B 304 6 HET GOL B 305 6 HET GOL B 306 6 HET GOL B 307 6 HET GOL B 308 6 HET GOL B 309 6 HET GOL B 310 6 HET GOL B 311 6 HET NO3 B 312 4 HET EDO B 313 4 HET EDO B 314 4 HET EDO B 315 4 HETNAM GOL GLYCEROL HETNAM CL CHLORIDE ION HETNAM NO3 NITRATE ION HETNAM EDO 1,2-ETHANEDIOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM PO4 PHOSPHATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 GOL 13(C3 H8 O3) FORMUL 6 CL CL 1- FORMUL 7 NO3 6(N O3 1-) FORMUL 12 EDO 10(C2 H6 O2) FORMUL 19 PEG C4 H10 O3 FORMUL 20 PO4 O4 P 3- FORMUL 35 HOH *376(H2 O) HELIX 1 AA1 TRP A 31 GLU A 37 1 7 HELIX 2 AA2 ASN A 58 ASN A 63 1 6 HELIX 3 AA3 PRO A 68 THR A 71 5 4 HELIX 4 AA4 PHE A 72 LEU A 83 1 12 HELIX 5 AA5 ILE A 102 ASN A 106 5 5 HELIX 6 AA6 ASN A 110 TYR A 117 1 8 HELIX 7 AA7 VAL A 119 GLY A 131 1 13 HELIX 8 AA8 GLY A 131 PHE A 142 1 12 HELIX 9 AA9 SER A 155 GLY A 160 1 6 HELIX 10 AB1 ALA A 166 HIS A 178 1 13 HELIX 11 AB2 SER A 184 MET A 195 1 12 HELIX 12 AB3 GLY A 245 GLU A 260 1 16 HELIX 13 AB4 TRP B 31 HIS B 38 1 8 HELIX 14 AB5 ASN B 58 ASN B 63 1 6 HELIX 15 AB6 PRO B 68 THR B 71 5 4 HELIX 16 AB7 PHE B 72 LEU B 83 1 12 HELIX 17 AB8 ILE B 102 ASN B 106 5 5 HELIX 18 AB9 ASN B 110 TYR B 117 1 8 HELIX 19 AC1 VAL B 119 PHE B 142 1 24 HELIX 20 AC2 SER B 155 GLY B 160 1 6 HELIX 21 AC3 ALA B 166 HIS B 178 1 13 HELIX 22 AC4 SER B 184 MET B 195 1 12 HELIX 23 AC5 GLY B 245 GLU B 260 1 16 SHEET 1 AA1 7 TRP A 25 GLU A 27 0 SHEET 2 AA1 7 GLN A 53 THR A 56 1 O GLY A 54 N GLN A 26 SHEET 3 AA1 7 GLY A 42 ASN A 48 -1 N LEU A 46 O PHE A 55 SHEET 4 AA1 7 VAL A 231 ASP A 239 -1 O ASN A 237 N VAL A 43 SHEET 5 AA1 7 ILE A 218 GLU A 226 -1 N GLY A 223 O PHE A 234 SHEET 6 AA1 7 ILE A 204 ARG A 206 -1 N ILE A 204 O GLU A 226 SHEET 7 AA1 7 LEU A 196 ALA A 199 -1 N GLU A 198 O ILE A 205 SHEET 1 AA2 2 ALA A 65 PHE A 66 0 SHEET 2 AA2 2 ILE A 164 SER A 165 -1 O ILE A 164 N PHE A 66 SHEET 1 AA3 7 TRP B 25 GLU B 27 0 SHEET 2 AA3 7 GLN B 53 THR B 56 1 O THR B 56 N GLN B 26 SHEET 3 AA3 7 GLY B 42 ASN B 48 -1 N LEU B 46 O PHE B 55 SHEET 4 AA3 7 VAL B 231 ASP B 239 -1 O PHE B 233 N TRP B 47 SHEET 5 AA3 7 ILE B 218 GLU B 226 -1 N GLY B 223 O PHE B 234 SHEET 6 AA3 7 ILE B 204 ARG B 206 -1 N ILE B 204 O GLU B 226 SHEET 7 AA3 7 LEU B 196 ALA B 199 -1 N GLU B 198 O ILE B 205 SHEET 1 AA4 2 ALA B 65 PHE B 66 0 SHEET 2 AA4 2 ILE B 164 SER B 165 -1 O ILE B 164 N PHE B 66 SITE 1 AC1 13 ASN A 200 GLY A 201 ASP A 202 TYR A 203 SITE 2 AC1 13 ILE A 204 GLU A 226 LEU A 227 ASP A 228 SITE 3 AC1 13 HOH A 434 HOH A 452 HOH A 539 HOH A 544 SITE 4 AC1 13 LYS B 116 SITE 1 AC2 6 LYS A 94 TRP A 95 ASP A 96 GLU A 125 SITE 2 AC2 6 HOH A 432 HOH A 490 SITE 1 AC3 8 GLU A 185 ARG A 186 ARG A 189 HOH A 476 SITE 2 AC3 8 HOH A 487 HOH A 492 ARG B 186 ARG B 189 SITE 1 AC4 3 ARG A 206 ARG B 206 HOH B 537 SITE 1 AC5 6 LYS A 73 VAL A 120 TYR A 123 TRP A 157 SITE 2 AC5 6 HOH A 405 HOH A 525 SITE 1 AC6 4 TRP A 105 VAL A 120 THR A 213 ARG A 214 SITE 1 AC7 4 LEU A 81 SER A 184 ARG A 186 SER A 187 SITE 1 AC8 7 LYS A 60 ARG A 61 GLN A 64 HOH A 423 SITE 2 AC8 7 HOH A 424 GLU B 147 HOH B 420 SITE 1 AC9 5 ARG A 174 LYS A 175 HIS A 178 LYS A 180 SITE 2 AC9 5 HOH A 483 SITE 1 AD1 3 TRP A 47 SER A 171 ARG A 174 SITE 1 AD2 6 ASN A 32 GLN A 41 GLY A 42 ASN A 57 SITE 2 AD2 6 ASN A 58 HOH A 424 SITE 1 AD3 6 ALA A 65 GLY A 145 ASN A 146 ARG A 163 SITE 2 AD3 6 GLU A 168 LYS B 60 SITE 1 AD4 6 PHE A 66 LEU A 67 LYS A 217 ILE A 218 SITE 2 AD4 6 HOH A 431 HOH A 472 SITE 1 AD5 4 LEU A 83 VAL A 85 ARG A 134 HOH A 453 SITE 1 AD6 5 ALA A 141 PHE A 142 LYS A 180 LEU A 181 SITE 2 AD6 5 HIS A 182 SITE 1 AD7 9 LYS A 73 MET A 115 SER A 118 LYS A 208 SITE 2 AD7 9 THR A 209 GLY A 210 TYR A 211 LEU A 246 SITE 3 AD7 9 HOH A 495 SITE 1 AD8 6 ASP A 108 ASN A 110 THR A 113 HOH A 469 SITE 2 AD8 6 ASP B 228 ASP B 229 SITE 1 AD9 5 GLU B 132 SER B 136 ILE B 149 LYS B 217 SITE 2 AD9 5 HOH B 451 SITE 1 AE1 5 ASN B 32 GLN B 41 GLY B 42 ASN B 58 SITE 2 AE1 5 HOH B 437 SITE 1 AE2 6 TRP B 25 THR B 167 SER B 171 ARG B 174 SITE 2 AE2 6 HOH B 474 HOH B 534 SITE 1 AE3 6 ASN A 179 GLU A 185 ARG A 189 LYS B 87 SITE 2 AE3 6 ASP B 88 ARG B 186 SITE 1 AE4 7 ASP A 228 VAL B 92 ASP B 108 ASN B 110 SITE 2 AE4 7 THR B 113 HOH B 431 HOH B 494 SITE 1 AE5 12 SER A 150 GLY A 151 GLY A 160 GLY A 161 SITE 2 AE5 12 ILE B 130 GLY B 131 GLU B 132 ALA B 133 SITE 3 AE5 12 ARG B 134 HOH B 405 HOH B 434 HOH B 448 SITE 1 AE6 11 LYS A 116 LYS A 208 HOH A 427 ASN B 200 SITE 2 AE6 11 GLY B 201 ASP B 202 TYR B 203 ILE B 204 SITE 3 AE6 11 HOH B 411 HOH B 424 HOH B 478 SITE 1 AE7 7 LYS B 94 TRP B 95 ASP B 96 ARG B 100 SITE 2 AE7 7 GLU B 125 GOL B 310 HOH B 480 SITE 1 AE8 5 ALA B 65 ASN B 146 ARG B 163 HOH B 452 SITE 2 AE8 5 HOH B 469 SITE 1 AE9 9 SER A 243 ASP A 244 HOH A 480 ARG B 100 SITE 2 AE9 9 PRO B 121 GLN B 124 GLU B 125 ARG B 128 SITE 3 AE9 9 GOL B 308 SITE 1 AF1 2 GLY B 160 GLY B 161 SITE 1 AF2 4 LYS B 73 TYR B 123 TRP B 157 HOH B 425 SITE 1 AF3 5 ARG B 174 LYS B 175 HIS B 178 LYS B 180 SITE 2 AF3 5 HOH B 440 SITE 1 AF4 5 LEU B 227 ASP B 228 ASP B 229 HOH B 419 SITE 2 AF4 5 HOH B 463 SITE 1 AF5 10 THR B 197 ALA B 207 LYS B 208 THR B 209 SITE 2 AF5 10 GLY B 210 TYR B 211 TRP B 221 LEU B 246 SITE 3 AF5 10 GLN B 250 HOH B 505 CRYST1 49.571 92.984 126.391 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020173 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010755 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007912 0.00000