HEADER PROTEIN TRANSPORT 14-NOV-18 6I5W TITLE BLMNBP1 BINDING PROTEIN OF AN ABC TRANSPORTER FROM BIFIDOBACTERIUM TITLE 2 ANIMALIS SUBSP. LACTIS ATCC27673 IN COMPLEX WITH MANNOBIOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SOLUTE BINDING PROTEIN BLMNBP1, BLAC_00780 IN COMPLEX WITH COMPND 3 MANNOPENTAOSE; COMPND 4 CHAIN: A; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BIFIDOBACTERIUM; SOURCE 3 ORGANISM_TAXID: 1678; SOURCE 4 STRAIN: ANIMALIS LACTIS; SOURCE 5 ATCC: ATCC27673; SOURCE 6 GENE: BLAC_00780; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PETM-11 KEYWDS SOLUTE BINDING PROTEIN, MANNOPENTAOSE, BIFIDOBACTERIUM ANIMALIS KEYWDS 2 SUBSP. LACTIS ATCC27673, BLAC_00780, PROTEIN TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR M.ABOU HACHEM,M.EJBY,A.GUSKOV,D.J.SLOTBOOM REVDAT 3 29-JUL-20 6I5W 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE ATOM REVDAT 2 17-JUL-19 6I5W 1 JRNL REVDAT 1 17-APR-19 6I5W 0 JRNL AUTH M.EJBY,A.GUSKOV,M.J.PICHLER,G.C.ZANTEN,E.SCHOOF,W.SABURI, JRNL AUTH 2 D.J.SLOTBOOM,M.ABOU HACHEM JRNL TITL TWO BINDING PROTEINS OF THE ABC TRANSPORTER THAT CONFERS JRNL TITL 2 GROWTH OF BIFIDOBACTERIUM ANIMALIS SUBSP. LACTIS ATCC27673 JRNL TITL 3 ON BETA-MANNAN POSSESS DISTINCT JRNL TITL 4 MANNO-OLIGOSACCHARIDE-BINDING PROFILES. JRNL REF MOL.MICROBIOL. V. 112 114 2019 JRNL REFN ESSN 1365-2958 JRNL PMID 30947380 JRNL DOI 10.1111/MMI.14257 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.55 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 32748 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.273 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1638 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.5656 - 4.3492 1.00 2774 147 0.1763 0.2327 REMARK 3 2 4.3492 - 3.4524 1.00 2643 139 0.1511 0.2146 REMARK 3 3 3.4524 - 3.0161 0.99 2590 136 0.1799 0.2382 REMARK 3 4 3.0161 - 2.7404 1.00 2609 136 0.1978 0.2963 REMARK 3 5 2.7404 - 2.5440 1.00 2561 135 0.2102 0.3071 REMARK 3 6 2.5440 - 2.3940 1.00 2611 138 0.2357 0.3110 REMARK 3 7 2.3940 - 2.2741 1.00 2538 134 0.2580 0.3174 REMARK 3 8 2.2741 - 2.1751 1.00 2570 135 0.2874 0.3354 REMARK 3 9 2.1751 - 2.0914 1.00 2556 135 0.3286 0.3974 REMARK 3 10 2.0914 - 2.0192 1.00 2566 135 0.3487 0.3515 REMARK 3 11 2.0192 - 1.9560 1.00 2555 134 0.3786 0.3985 REMARK 3 12 1.9560 - 1.9001 1.00 2537 134 0.4199 0.4190 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.490 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 57.28 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6I5W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-NOV-18. REMARK 100 THE DEPOSITION ID IS D_1200012893. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-FEB-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID30B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9989 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER R 4M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32748 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 47.551 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 13.30 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.0900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.940 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.11 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MOTHER LIQUOR, 0.1 M MES PH 5.5, 0.05 REMARK 280 M ZN-ACETATE AND 18% PEG 8000. PROTEIN,15 MG/ML IN 10 MM MES PH REMARK 280 6.5 AND 150 MM NACL. DROPS SET UP 1 TO 1, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 278K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.76000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.80500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.62500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.80500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.76000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.62500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4610 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17380 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -364.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ1 LYS A 351 ZN ZN A 724 1.10 REMARK 500 HD21 ASN A 291 O ASP A 313 1.20 REMARK 500 HZ2 LYS A 351 ZN ZN A 724 1.28 REMARK 500 HD2 HIS A 314 ZN ZN A 727 1.29 REMARK 500 NZ LYS A 351 ZN ZN A 724 1.44 REMARK 500 OD2 ASP A 117 HE3 LYS A 351 1.49 REMARK 500 HZ1 LYS A 351 O HOH A 801 1.54 REMARK 500 HZ1 LYS A 147 O ASP A 381 1.55 REMARK 500 OE2 GLU A 284 HZ1 LYS A 287 1.56 REMARK 500 H THR A 59 OD1 ASP A 117 1.57 REMARK 500 O4 BMA B 4 O5 BMA B 5 1.96 REMARK 500 ND2 ASN A 291 O ASP A 313 2.02 REMARK 500 NZ LYS A 351 O HOH A 801 2.04 REMARK 500 NZ LYS A 147 O ASP A 381 2.09 REMARK 500 OD2 ASP A 117 CE LYS A 351 2.13 REMARK 500 O4 BMA B 3 O5 BMA B 4 2.17 REMARK 500 OD2 ASP A 117 NZ LYS A 351 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 ZN ZN A 722 ZN ZN A 729 4477 0.98 REMARK 500 HZ3 LYS A 249 ZN ZN A 726 3757 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 317 CB - CG - OD1 ANGL. DEV. = 5.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 49 26.72 -141.24 REMARK 500 ASN A 113 -162.13 -128.95 REMARK 500 LYS A 152 66.64 -104.28 REMARK 500 ASP A 155 45.05 39.73 REMARK 500 ALA A 226 -95.09 -117.88 REMARK 500 HIS A 257 171.48 72.91 REMARK 500 ASP A 313 -177.52 -65.14 REMARK 500 ASP A 338 -98.72 -75.91 REMARK 500 GLU A 382 -66.54 -121.36 REMARK 500 SER A 383 72.88 34.63 REMARK 500 MET A 384 100.31 -55.53 REMARK 500 PRO A 385 159.37 -36.02 REMARK 500 THR A 387 50.65 -62.49 REMARK 500 TYR A 388 17.44 -158.37 REMARK 500 THR A 390 1.74 -65.05 REMARK 500 ASN A 423 19.22 -145.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 727 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LYS A 46 NZ REMARK 620 2 ASP A 317 OD1 94.2 REMARK 620 3 ASP A 317 OD2 94.2 2.3 REMARK 620 4 HOH A 899 O 96.7 2.6 3.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 720 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 49 OE1 REMARK 620 2 GLU A 49 OE2 64.4 REMARK 620 3 LYS A 52 NZ 72.3 96.7 REMARK 620 4 LYS A 175 NZ 97.6 33.4 106.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 724 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 117 OD1 REMARK 620 2 ASP A 117 OD2 61.4 REMARK 620 3 HOH A 801 O 121.0 85.0 REMARK 620 4 HOH A 891 O 119.6 152.3 70.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 725 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 128 OE1 REMARK 620 2 GLU A 128 OE2 65.9 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 726 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 178 OE2 REMARK 620 2 LYS A 249 NZ 22.2 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 723 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 190 OE2 REMARK 620 2 ASP A 255 OD2 106.3 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 714 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 215 OD1 REMARK 620 2 ASP A 215 OD2 61.6 REMARK 620 3 HOH A 827 O 87.5 66.7 REMARK 620 4 HOH A 896 O 140.1 118.7 131.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 718 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 250 OD2 REMARK 620 2 HOH A 893 O 89.2 REMARK 620 3 HOH A 903 O 132.4 118.7 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 719 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 257 NE2 REMARK 620 2 HOH A 897 O 103.8 REMARK 620 3 HOH A 901 O 114.1 82.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 715 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 313 OD1 REMARK 620 2 ASP A 313 OD2 61.3 REMARK 620 3 LYS A 360 NZ 65.2 106.4 REMARK 620 4 GLU A 364 OE1 66.2 105.1 2.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 716 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 328 OD1 REMARK 620 2 HOH A 879 O 109.8 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 728 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 328 OD1 REMARK 620 2 GLU A 353 OE1 55.6 REMARK 620 3 GLU A 353 OE2 56.3 2.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 722 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 404 OE1 REMARK 620 2 GLU A 404 OE2 63.6 REMARK 620 3 GLU A 407 OE2 121.5 133.7 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 729 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 404 OE1 REMARK 620 2 GLU A 407 OE2 119.8 REMARK 620 3 GLU A 449 OE1 111.2 12.1 REMARK 620 4 GLU A 449 OE2 112.3 14.2 3.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 717 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 431 OD1 REMARK 620 2 ASP A 435 OD1 99.6 REMARK 620 3 ASP A 435 OD2 96.1 52.8 REMARK 620 4 HOH A 807 O 44.7 129.3 90.7 REMARK 620 5 HOH A 829 O 48.4 130.7 89.7 3.7 REMARK 620 N 1 2 3 4 DBREF 6I5W A 35 461 PDB 6I5W 6I5W 35 461 SEQRES 1 A 427 GLY ASN LYS THR GLY ILE THR TYR PRO GLU ILE LYS LEU SEQRES 2 A 427 GLY GLU THR GLY LYS ASP ILE LYS THR THR ILE THR PHE SEQRES 3 A 427 MET ASN ASN ARG THR ASP MET ASN LEU ASP THR TYR PRO SEQRES 4 A 427 GLY LYS ASN TRP LYS SER TYR ILE GLU ASP PHE ASN LYS SEQRES 5 A 427 MET TYR PRO ASN ILE THR VAL LYS VAL GLN THR ASP SER SEQRES 6 A 427 ASN TYR ALA ASP SER ALA LEU THR ARG LEU GLN ALA ASN SEQRES 7 A 427 ASN ASP SER TRP ASP ILE MET MET ILE PRO ALA VAL ASP SEQRES 8 A 427 LYS SER GLU PHE SER ASN TYR PHE VAL PRO TYR GLY GLU SEQRES 9 A 427 THR SER GLU MET GLU LYS VAL ILE LYS LEU ALA ASP GLU SEQRES 10 A 427 LYS ALA TYR ASP GLY GLN THR TYR GLY ILE ALA ASN ASN SEQRES 11 A 427 GLY VAL THR ALA GLY ILE VAL TYR ASN LYS LYS VAL PHE SEQRES 12 A 427 GLU GLU ALA GLY ILE LYS GLU LEU PRO LYS THR PRO GLU SEQRES 13 A 427 GLU PHE GLN ALA ASP LEU LYS LEU ILE LYS GLU LYS THR SEQRES 14 A 427 LYS ALA VAL PRO LEU TYR THR ASN PHE VAL GLU ASP TRP SEQRES 15 A 427 ALA MET GLY ALA TRP ASP GLN TYR ILE ALA GLY ASN ALA SEQRES 16 A 427 THR GLY ASP PRO LYS PHE MET ASN GLN VAL LEU PRO THR SEQRES 17 A 427 THR LYS GLU PRO PHE LYS LYS ASP ALA SER ALA PRO ASP SEQRES 18 A 427 THR HIS PRO TYR ALA VAL TYR LYS THR LEU TYR ASP ALA SEQRES 19 A 427 VAL ALA ASN GLY TYR THR GLU GLU ASP TYR SER THR THR SEQRES 20 A 427 ASP TRP GLU SER SER LYS GLY LYS MET ASN ASN GLY GLU SEQRES 21 A 427 ILE ALA THR MET VAL LEU GLY ALA TRP ALA VAL PRO GLN SEQRES 22 A 427 MET LYS GLN ALA GLY ASP HIS PRO ASP ASP ILE GLY TYR SEQRES 23 A 427 MET PRO PHE PRO ILE THR VAL ASP GLY LYS GLN TYR ALA SEQRES 24 A 427 THR ILE ALA GLY ASP TYR SER TYR GLY ILE ASN LYS ASN SEQRES 25 A 427 ILE SER LYS GLU LYS GLN GLU ALA SER MET ILE PHE VAL SEQRES 26 A 427 LYS TRP MET THR GLU ASP SER GLY PHE ALA LYS ASN GLU SEQRES 27 A 427 GLY GLY ILE PRO ILE LYS ALA ASP ASP GLU SER MET PRO SEQRES 28 A 427 GLU THR TYR GLU THR PHE SER ASP VAL GLU LEU ILE THR SEQRES 29 A 427 ASP ALA PRO ALA LYS GLU GLY GLN GLU ASP LEU LEU ALA SEQRES 30 A 427 ASN VAL ASN SER ASP SER GLU LEU GLY ILE ASN ASN GLY SEQRES 31 A 427 ASN GLY LYS LYS ILE GLN ASP ILE VAL VAL ASP ALA ALA SEQRES 32 A 427 ASN ARG THR ARG THR ILE ASP GLN ILE MET ASP GLU TRP SEQRES 33 A 427 ASN GLN LYS TRP ALA LYS ALA VAL GLU ASP ASN HET BMA B 1 23 HET BMA B 2 21 HET BMA B 3 21 HET BMA B 4 21 HET BMA B 5 22 HET ACT A 701 7 HET ACT A 702 7 HET ACT A 703 7 HET ACT A 704 7 HET ACT A 705 7 HET ACT A 706 7 HET ACT A 707 7 HET ZN A 713 1 HET ZN A 714 1 HET ZN A 715 1 HET ZN A 716 1 HET ZN A 717 1 HET ZN A 718 1 HET ZN A 719 1 HET ZN A 720 1 HET ZN A 721 1 HET ZN A 722 1 HET ZN A 723 1 HET ZN A 724 1 HET ZN A 725 1 HET ZN A 726 1 HET ZN A 727 1 HET ZN A 728 1 HET ZN A 729 1 HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM ACT ACETATE ION HETNAM ZN ZINC ION FORMUL 2 BMA 5(C6 H12 O6) FORMUL 3 ACT 7(C2 H3 O2 1-) FORMUL 10 ZN 17(ZN 2+) FORMUL 27 HOH *103(H2 O) HELIX 1 AA1 THR A 41 ILE A 45 5 5 HELIX 2 AA2 ARG A 64 LEU A 69 5 6 HELIX 3 AA3 ASN A 76 ASN A 85 1 10 HELIX 4 AA4 ASN A 100 ASN A 112 1 13 HELIX 5 AA5 GLU A 128 PHE A 133 1 6 HELIX 6 AA6 THR A 139 GLU A 143 1 5 HELIX 7 AA7 LYS A 174 ALA A 180 1 7 HELIX 8 AA8 THR A 188 THR A 203 1 16 HELIX 9 AA9 GLU A 214 ALA A 220 1 7 HELIX 10 AB1 TRP A 221 ILE A 225 5 5 HELIX 11 AB2 ALA A 226 GLY A 231 1 6 HELIX 12 AB3 VAL A 239 THR A 243 5 5 HELIX 13 AB4 THR A 256 ASN A 271 1 16 HELIX 14 AB5 ASP A 277 THR A 281 5 5 HELIX 15 AB6 ASP A 282 ASN A 292 1 11 HELIX 16 AB7 TRP A 303 ALA A 311 1 9 HELIX 17 AB8 HIS A 314 ASP A 316 5 3 HELIX 18 AB9 SER A 348 ASP A 365 1 18 HELIX 19 AC1 GLY A 367 GLU A 372 1 6 HELIX 20 AC2 TYR A 388 SER A 392 5 5 HELIX 21 AC3 ASP A 408 GLU A 418 1 11 HELIX 22 AC4 GLY A 426 ASN A 438 1 13 HELIX 23 AC5 THR A 442 ASN A 461 1 20 SHEET 1 AA1 5 ILE A 91 THR A 97 0 SHEET 2 AA1 5 THR A 56 ASN A 62 1 N PHE A 60 O LYS A 94 SHEET 3 AA1 5 ILE A 118 MET A 120 1 O ILE A 118 N MET A 61 SHEET 4 AA1 5 SER A 340 ILE A 343 -1 O GLY A 342 N MET A 119 SHEET 5 AA1 5 ILE A 161 ALA A 162 -1 N ILE A 161 O TYR A 341 SHEET 1 AA2 3 GLY A 137 GLU A 138 0 SHEET 2 AA2 3 GLN A 157 THR A 158 -1 O THR A 158 N GLY A 137 SHEET 3 AA2 3 ALA A 153 TYR A 154 -1 N TYR A 154 O GLN A 157 SHEET 1 AA3 4 VAL A 206 LEU A 208 0 SHEET 2 AA3 4 ILE A 295 GLY A 301 1 O ALA A 296 N VAL A 206 SHEET 3 AA3 4 GLY A 165 ASN A 173 -1 N VAL A 171 O MET A 298 SHEET 4 AA3 4 ILE A 318 PRO A 322 -1 O GLY A 319 N TYR A 172 SHEET 1 AA4 5 VAL A 206 LEU A 208 0 SHEET 2 AA4 5 ILE A 295 GLY A 301 1 O ALA A 296 N VAL A 206 SHEET 3 AA4 5 GLY A 165 ASN A 173 -1 N VAL A 171 O MET A 298 SHEET 4 AA4 5 TYR A 332 GLY A 337 -1 O ALA A 336 N VAL A 166 SHEET 5 AA4 5 GLU A 395 ILE A 397 1 O ILE A 397 N ILE A 335 LINK O4 BMA B 1 C1 BMA B 2 1555 1555 1.52 LINK O4 BMA B 2 C1 BMA B 3 1555 1555 1.51 LINK O4 BMA B 3 C1 BMA B 4 1555 1555 1.36 LINK O4 BMA B 4 C1 BMA B 5 1555 1555 1.30 LINK NZ LYS A 46 ZN ZN A 727 1555 4467 2.49 LINK OE1 GLU A 49 ZN ZN A 720 1555 1555 2.00 LINK OE2 GLU A 49 ZN ZN A 720 1555 1555 2.09 LINK NZ LYS A 52 ZN ZN A 720 1555 1555 2.68 LINK OD1 ASP A 117 ZN ZN A 724 1555 1555 2.12 LINK OD2 ASP A 117 ZN ZN A 724 1555 1555 2.15 LINK OE1 GLU A 128 ZN ZN A 725 1555 1555 2.05 LINK OE2 GLU A 128 ZN ZN A 725 1555 1555 1.99 LINK OD1 ASP A 155 ZN ZN A 713 1555 1555 2.15 LINK NZ LYS A 175 ZN ZN A 720 1555 4567 2.61 LINK OE2 GLU A 178 ZN ZN A 726 1555 1555 1.97 LINK OE2 GLU A 190 ZN ZN A 723 1555 1555 1.98 LINK OD1 ASP A 195 ZN ZN A 721 1555 1555 2.17 LINK OD1 ASP A 215 ZN ZN A 714 1555 1555 2.09 LINK OD2 ASP A 215 ZN ZN A 714 1555 1555 2.15 LINK NZ LYS A 249 ZN ZN A 726 1555 3757 2.01 LINK OD2 ASP A 250 ZN ZN A 718 1555 1555 1.95 LINK OD2 ASP A 255 ZN ZN A 723 1555 1555 1.96 LINK NE2 HIS A 257 ZN ZN A 719 1555 1555 1.98 LINK OD1 ASP A 313 ZN ZN A 715 1555 1555 2.18 LINK OD2 ASP A 313 ZN ZN A 715 1555 1555 2.05 LINK OD1 ASP A 317 ZN ZN A 727 1555 1555 2.45 LINK OD2 ASP A 317 ZN ZN A 727 1555 1555 2.09 LINK OD1 ASP A 328 ZN ZN A 716 1555 1555 1.95 LINK OD1 ASP A 328 ZN ZN A 728 1555 2675 2.47 LINK OE1 GLU A 353 ZN ZN A 728 1555 1555 2.10 LINK OE2 GLU A 353 ZN ZN A 728 1555 1555 2.08 LINK NZ LYS A 360 ZN ZN A 715 1555 4467 2.35 LINK OE1 GLU A 364 ZN ZN A 715 1555 4467 2.22 LINK OE1 GLU A 404 ZN ZN A 722 1555 1555 2.18 LINK OE2 GLU A 404 ZN ZN A 722 1555 1555 2.00 LINK OE1 GLU A 404 ZN ZN A 729 1555 4477 2.28 LINK OE2 GLU A 407 ZN ZN A 722 1555 1555 2.14 LINK OE2 GLU A 407 ZN ZN A 729 1555 4477 2.07 LINK OD1 ASP A 431 ZN ZN A 717 1555 4577 2.22 LINK OD1 ASP A 435 ZN ZN A 717 1555 4577 2.25 LINK OD2 ASP A 435 ZN ZN A 717 1555 4577 2.63 LINK OE1 GLU A 449 ZN ZN A 729 1555 1555 2.66 LINK OE2 GLU A 449 ZN ZN A 729 1555 1555 1.97 LINK ZN ZN A 714 O HOH A 827 1555 1555 2.42 LINK ZN ZN A 714 O HOH A 896 1555 1555 2.46 LINK ZN ZN A 716 O HOH A 879 1555 2675 2.31 LINK ZN ZN A 717 O HOH A 807 1555 1555 2.52 LINK ZN ZN A 717 O HOH A 829 1555 4477 1.85 LINK ZN ZN A 718 O HOH A 893 1555 1555 2.52 LINK ZN ZN A 718 O HOH A 903 1555 1555 2.58 LINK ZN ZN A 719 O HOH A 897 1555 1555 2.23 LINK ZN ZN A 719 O HOH A 901 1555 1555 2.57 LINK ZN ZN A 724 O HOH A 801 1555 1555 2.56 LINK ZN ZN A 724 O HOH A 891 1555 1555 2.46 LINK ZN ZN A 727 O HOH A 899 1555 1555 2.33 CRYST1 53.520 73.250 103.610 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018685 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013652 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009652 0.00000