HEADER GENE REGULATION 17-NOV-18 6I7Q TITLE STRUCTURE OF PVHL-ELONGIN B-ELONGIN C (VCB) IN COMPLEX WITH TITLE 2 HYDROXYLATED-HIF-2ALPHA (523-542) IN THE C2221 FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: ELONGIN-B; COMPND 3 CHAIN: B; COMPND 4 SYNONYM: ELOB,ELONGIN 18 KDA SUBUNIT,RNA POLYMERASE II TRANSCRIPTION COMPND 5 FACTOR SIII SUBUNIT B,SIII P18,TRANSCRIPTION ELONGATION FACTOR B COMPND 6 POLYPEPTIDE 2; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: ELONGIN-C; COMPND 10 CHAIN: C; COMPND 11 SYNONYM: ELOC,ELONGIN 15 KDA SUBUNIT,RNA POLYMERASE II TRANSCRIPTION COMPND 12 FACTOR SIII SUBUNIT C,SIII P15,TRANSCRIPTION ELONGATION FACTOR B COMPND 13 POLYPEPTIDE 1; COMPND 14 ENGINEERED: YES; COMPND 15 MOL_ID: 3; COMPND 16 MOLECULE: ENDOTHELIAL PAS DOMAIN-CONTAINING PROTEIN 1; COMPND 17 CHAIN: H; COMPND 18 SYNONYM: EPAS-1,BASIC-HELIX-LOOP-HELIX-PAS PROTEIN MOP2,CLASS E BASIC COMPND 19 HELIX-LOOP-HELIX PROTEIN 73,BHLHE73,HIF-1-ALPHA-LIKE FACTOR,HLF, COMPND 20 HYPOXIA-INDUCIBLE FACTOR 2-ALPHA,HIF2-ALPHA,MEMBER OF PAS PROTEIN 2, COMPND 21 PAS DOMAIN-CONTAINING PROTEIN 2; COMPND 22 ENGINEERED: YES; COMPND 23 MOL_ID: 4; COMPND 24 MOLECULE: VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR; COMPND 25 CHAIN: V; COMPND 26 SYNONYM: PROTEIN G7,PVHL; COMPND 27 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ELOB, TCEB2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX-4T-3; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 13 ORGANISM_COMMON: BOVINE; SOURCE 14 ORGANISM_TAXID: 9913; SOURCE 15 GENE: ELOC, TCEB1; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 17 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PLASMID; SOURCE 19 MOL_ID: 3; SOURCE 20 SYNTHETIC: YES; SOURCE 21 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 22 ORGANISM_COMMON: HUMAN; SOURCE 23 ORGANISM_TAXID: 9606; SOURCE 24 MOL_ID: 4; SOURCE 25 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 26 ORGANISM_COMMON: HUMAN; SOURCE 27 ORGANISM_TAXID: 9606; SOURCE 28 GENE: VHL; SOURCE 29 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 30 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 31 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 32 EXPRESSION_SYSTEM_PLASMID: PGEX-4T-3 KEYWDS E3 UBIQUITIN LIGASE, GENE REGULATION, VON HIPPEL LINDAU, PROLYL KEYWDS 2 HYDROXYLATION, HIF, TUMOR SUPPRESSOR, CANCER, PROTEOSOMAL KEYWDS 3 DEGRADATION, UBIQUITIN EXPDTA X-RAY DIFFRACTION AUTHOR R.CHOWDHURY,L.S.AGUILERA,C.J.SCHOFIELD REVDAT 3 24-JAN-24 6I7Q 1 REMARK REVDAT 2 20-JAN-21 6I7Q 1 COMPND SOURCE REMARK DBREF REVDAT 2 2 1 SEQADV REVDAT 1 27-NOV-19 6I7Q 0 JRNL AUTH R.CHOWDHURY,C.J.SCHOFIELD JRNL TITL HIF-2ALPHA-PVHL-ELONGIN B-ELONGIN C COMPLEX JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH W.C.HON,M.I.WILSON,K.HARLOS,T.D.CLARIDGE,C.J.SCHOFIELD, REMARK 1 AUTH 2 C.W.PUGH,P.H.MAXWELL,P.J.RATCLIFFE,D.I.STUART,E.Y.JONES REMARK 1 TITL STRUCTURAL BASIS FOR THE RECOGNITION OF HYDROXYPROLINE IN REMARK 1 TITL 2 HIF-1 ALPHA BY PVHL. REMARK 1 REF NATURE V. 417 975 2002 REMARK 1 REFN ISSN 0028-0836 REMARK 1 PMID 12050673 REMARK 1 DOI 10.1038/NATURE00767 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.14_3260: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 59.53 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 44373 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.890 REMARK 3 FREE R VALUE TEST SET COUNT : 2171 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 59.5597 - 4.5310 1.00 2866 129 0.1813 0.2213 REMARK 3 2 4.5310 - 3.5965 0.99 2753 129 0.1415 0.1780 REMARK 3 3 3.5965 - 3.1419 0.99 2643 167 0.1634 0.2108 REMARK 3 4 3.1419 - 2.8546 0.98 2677 126 0.1698 0.2547 REMARK 3 5 2.8546 - 2.6500 0.98 2620 158 0.1807 0.1972 REMARK 3 6 2.6500 - 2.4938 0.97 2611 131 0.1869 0.2426 REMARK 3 7 2.4938 - 2.3689 0.97 2619 132 0.1911 0.2627 REMARK 3 8 2.3689 - 2.2658 0.97 2627 133 0.1867 0.2542 REMARK 3 9 2.2658 - 2.1785 0.98 2623 135 0.2005 0.2492 REMARK 3 10 2.1785 - 2.1034 0.98 2628 140 0.2023 0.2390 REMARK 3 11 2.1034 - 2.0376 0.98 2616 140 0.2230 0.2951 REMARK 3 12 2.0376 - 1.9793 0.98 2655 121 0.2405 0.2941 REMARK 3 13 1.9793 - 1.9272 0.98 2579 143 0.2624 0.3003 REMARK 3 14 1.9272 - 1.8802 0.97 2621 131 0.2880 0.3617 REMARK 3 15 1.8802 - 1.8375 0.97 2568 134 0.3203 0.3942 REMARK 3 16 1.8375 - 1.7984 0.93 2496 122 0.3507 0.4505 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BULK SOLVENT MODELLING METHOD USED : FLAT REMARK 3 MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.830 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.018 3090 REMARK 3 ANGLE : 1.399 4210 REMARK 3 CHIRALITY : 0.080 471 REMARK 3 PLANARITY : 0.011 556 REMARK 3 DIHEDRAL : 6.808 2603 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 26 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 9 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.3544 13.1880 9.1572 REMARK 3 T TENSOR REMARK 3 T11: 0.3180 T22: 0.3087 REMARK 3 T33: 0.2473 T12: -0.1422 REMARK 3 T13: -0.1049 T23: 0.0930 REMARK 3 L TENSOR REMARK 3 L11: 0.1646 L22: 0.3883 REMARK 3 L33: 0.0291 L12: -0.2331 REMARK 3 L13: 0.0346 L23: -0.0404 REMARK 3 S TENSOR REMARK 3 S11: -0.1064 S12: 0.0546 S13: -0.0709 REMARK 3 S21: -0.2388 S22: 0.1731 S23: 0.3429 REMARK 3 S31: -0.1218 S32: 0.0828 S33: -0.0127 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 10 THROUGH 23 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.9493 15.6560 8.1249 REMARK 3 T TENSOR REMARK 3 T11: 0.3424 T22: 0.2651 REMARK 3 T33: 0.2548 T12: -0.1270 REMARK 3 T13: -0.0929 T23: 0.0967 REMARK 3 L TENSOR REMARK 3 L11: 0.0558 L22: 0.3207 REMARK 3 L33: 0.0866 L12: -0.1290 REMARK 3 L13: -0.0410 L23: 0.1589 REMARK 3 S TENSOR REMARK 3 S11: -0.0660 S12: 0.1408 S13: -0.1333 REMARK 3 S21: -0.1768 S22: -0.0998 S23: 0.3000 REMARK 3 S31: -0.2892 S32: -0.1042 S33: -0.1166 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 24 THROUGH 35 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.0674 20.9334 3.6030 REMARK 3 T TENSOR REMARK 3 T11: 0.4328 T22: 0.3013 REMARK 3 T33: 0.4111 T12: -0.0693 REMARK 3 T13: -0.2172 T23: 0.1365 REMARK 3 L TENSOR REMARK 3 L11: 0.1120 L22: 0.2212 REMARK 3 L33: 0.2566 L12: -0.1029 REMARK 3 L13: -0.1453 L23: 0.2214 REMARK 3 S TENSOR REMARK 3 S11: -0.1053 S12: 0.1306 S13: 0.0587 REMARK 3 S21: 0.0123 S22: -0.0849 S23: 0.0794 REMARK 3 S31: -0.0361 S32: -0.0084 S33: -0.1076 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 36 THROUGH 45 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.9528 20.8488 -3.6424 REMARK 3 T TENSOR REMARK 3 T11: 0.6574 T22: 0.4069 REMARK 3 T33: 0.0845 T12: -0.1820 REMARK 3 T13: -0.4480 T23: 0.3937 REMARK 3 L TENSOR REMARK 3 L11: 0.0268 L22: 0.0344 REMARK 3 L33: -0.0008 L12: -0.0282 REMARK 3 L13: -0.0017 L23: -0.0053 REMARK 3 S TENSOR REMARK 3 S11: -0.0477 S12: 0.1104 S13: 0.1783 REMARK 3 S21: -0.0689 S22: -0.0815 S23: 0.0010 REMARK 3 S31: -0.0853 S32: 0.0145 S33: -0.0784 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 46 THROUGH 55 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.6929 8.0514 -2.4399 REMARK 3 T TENSOR REMARK 3 T11: 0.4173 T22: 0.4601 REMARK 3 T33: 0.3073 T12: -0.0536 REMARK 3 T13: -0.0790 T23: -0.1426 REMARK 3 L TENSOR REMARK 3 L11: 0.0595 L22: 0.3328 REMARK 3 L33: 0.1693 L12: 0.0509 REMARK 3 L13: -0.0506 L23: -0.2362 REMARK 3 S TENSOR REMARK 3 S11: 0.1448 S12: 0.0496 S13: 0.0274 REMARK 3 S21: 0.1044 S22: 0.1912 S23: 0.0184 REMARK 3 S31: 0.0358 S32: 0.0097 S33: 0.0427 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 56 THROUGH 65 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.7036 4.6772 7.8814 REMARK 3 T TENSOR REMARK 3 T11: 0.3415 T22: 0.2926 REMARK 3 T33: 0.3385 T12: -0.0751 REMARK 3 T13: -0.0921 T23: 0.0399 REMARK 3 L TENSOR REMARK 3 L11: 0.0018 L22: 0.0003 REMARK 3 L33: 0.0057 L12: 0.0001 REMARK 3 L13: 0.0101 L23: 0.0020 REMARK 3 S TENSOR REMARK 3 S11: 0.0535 S12: 0.2041 S13: 0.0456 REMARK 3 S21: -0.1113 S22: -0.1146 S23: 0.0149 REMARK 3 S31: 0.0523 S32: -0.1944 S33: -0.0000 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 66 THROUGH 79 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.2365 10.8530 7.7602 REMARK 3 T TENSOR REMARK 3 T11: 0.3294 T22: 0.2927 REMARK 3 T33: 0.2192 T12: -0.1472 REMARK 3 T13: -0.0977 T23: 0.0602 REMARK 3 L TENSOR REMARK 3 L11: 0.2060 L22: 0.0740 REMARK 3 L33: 0.0368 L12: -0.1054 REMARK 3 L13: -0.0644 L23: 0.0595 REMARK 3 S TENSOR REMARK 3 S11: -0.1586 S12: 0.2006 S13: -0.1841 REMARK 3 S21: -0.3442 S22: 0.1378 S23: 0.0835 REMARK 3 S31: -0.0593 S32: 0.0717 S33: -0.0613 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 80 THROUGH 84 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.4877 23.6087 -12.7896 REMARK 3 T TENSOR REMARK 3 T11: 1.1159 T22: 1.2458 REMARK 3 T33: 0.8352 T12: 0.0074 REMARK 3 T13: -0.1271 T23: 0.1205 REMARK 3 L TENSOR REMARK 3 L11: 0.0102 L22: 0.0011 REMARK 3 L33: 0.0147 L12: -0.0006 REMARK 3 L13: -0.0029 L23: -0.0027 REMARK 3 S TENSOR REMARK 3 S11: -0.0219 S12: -0.0099 S13: 0.0118 REMARK 3 S21: 0.0007 S22: -0.0096 S23: 0.0123 REMARK 3 S31: -0.0086 S32: -0.0294 S33: 0.0001 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 85 THROUGH 89 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.3567 16.9287 -8.0619 REMARK 3 T TENSOR REMARK 3 T11: 0.8542 T22: 1.1323 REMARK 3 T33: 0.2102 T12: -0.0954 REMARK 3 T13: -0.0070 T23: 0.0401 REMARK 3 L TENSOR REMARK 3 L11: 0.0138 L22: 0.1597 REMARK 3 L33: 0.0019 L12: 0.0146 REMARK 3 L13: 0.0041 L23: 0.0070 REMARK 3 S TENSOR REMARK 3 S11: -0.0212 S12: 0.0324 S13: -0.0099 REMARK 3 S21: -0.0632 S22: -0.0761 S23: 0.0666 REMARK 3 S31: 0.0082 S32: -0.0752 S33: 0.0019 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 90 THROUGH 94 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.3331 14.3025 2.1866 REMARK 3 T TENSOR REMARK 3 T11: 0.5403 T22: 0.4625 REMARK 3 T33: 0.1137 T12: -0.2054 REMARK 3 T13: 0.0318 T23: -0.0048 REMARK 3 L TENSOR REMARK 3 L11: 0.0548 L22: -0.0009 REMARK 3 L33: 0.0015 L12: 0.0034 REMARK 3 L13: 0.0108 L23: -0.0009 REMARK 3 S TENSOR REMARK 3 S11: 0.0158 S12: 0.0926 S13: 0.0344 REMARK 3 S21: -0.0773 S22: 0.0312 S23: -0.0322 REMARK 3 S31: -0.0033 S32: -0.0267 S33: 0.0138 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 95 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.4454 6.6264 10.5607 REMARK 3 T TENSOR REMARK 3 T11: 0.5436 T22: 0.4516 REMARK 3 T33: 0.3514 T12: -0.0244 REMARK 3 T13: 0.1451 T23: -0.1086 REMARK 3 L TENSOR REMARK 3 L11: 0.0045 L22: 0.0186 REMARK 3 L33: 0.0049 L12: -0.0045 REMARK 3 L13: 0.0016 L23: -0.0062 REMARK 3 S TENSOR REMARK 3 S11: -0.0420 S12: 0.0331 S13: -0.0083 REMARK 3 S21: -0.0750 S22: -0.0112 S23: 0.0020 REMARK 3 S31: -0.0348 S32: 0.0344 S33: -0.0000 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 100 THROUGH 105 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.1589 0.2008 18.5390 REMARK 3 T TENSOR REMARK 3 T11: 0.5102 T22: 0.4400 REMARK 3 T33: 0.6589 T12: 0.1122 REMARK 3 T13: 0.1408 T23: -0.1317 REMARK 3 L TENSOR REMARK 3 L11: 0.0017 L22: -0.0001 REMARK 3 L33: 0.0024 L12: 0.0008 REMARK 3 L13: 0.0029 L23: 0.0017 REMARK 3 S TENSOR REMARK 3 S11: 0.0160 S12: 0.0324 S13: -0.0113 REMARK 3 S21: -0.0296 S22: -0.0000 S23: -0.0169 REMARK 3 S31: 0.0691 S32: 0.0053 S33: 0.0000 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 16 THROUGH 45 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.0590 24.8118 15.6500 REMARK 3 T TENSOR REMARK 3 T11: 0.2850 T22: 0.2259 REMARK 3 T33: 0.2476 T12: -0.1158 REMARK 3 T13: -0.0238 T23: 0.0587 REMARK 3 L TENSOR REMARK 3 L11: 0.5347 L22: 0.1270 REMARK 3 L33: 0.3838 L12: -0.1678 REMARK 3 L13: 0.2580 L23: -0.1839 REMARK 3 S TENSOR REMARK 3 S11: -0.2957 S12: 0.0823 S13: 0.2484 REMARK 3 S21: -0.3915 S22: 0.2892 S23: 0.0067 REMARK 3 S31: -0.1818 S32: -0.1147 S33: -0.0803 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 46 THROUGH 58 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.7471 37.6210 20.2629 REMARK 3 T TENSOR REMARK 3 T11: 0.2487 T22: 0.3546 REMARK 3 T33: 0.5197 T12: -0.0438 REMARK 3 T13: -0.1178 T23: 0.0424 REMARK 3 L TENSOR REMARK 3 L11: 0.0008 L22: 0.0049 REMARK 3 L33: 0.0030 L12: 0.0030 REMARK 3 L13: -0.0059 L23: 0.0026 REMARK 3 S TENSOR REMARK 3 S11: 0.0123 S12: -0.0871 S13: 0.0378 REMARK 3 S21: 0.0182 S22: 0.0216 S23: -0.0217 REMARK 3 S31: -0.0294 S32: -0.0059 S33: -0.0000 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 59 THROUGH 112 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.2281 14.5386 19.6910 REMARK 3 T TENSOR REMARK 3 T11: 0.1698 T22: 0.1850 REMARK 3 T33: 0.1962 T12: -0.0704 REMARK 3 T13: -0.0001 T23: 0.0171 REMARK 3 L TENSOR REMARK 3 L11: 0.1090 L22: 0.3352 REMARK 3 L33: 0.1791 L12: 0.0408 REMARK 3 L13: 0.1394 L23: 0.0552 REMARK 3 S TENSOR REMARK 3 S11: -0.1569 S12: 0.1054 S13: -0.0473 REMARK 3 S21: -0.1592 S22: 0.2644 S23: 0.0214 REMARK 3 S31: 0.0086 S32: 0.0078 S33: 0.2146 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 526 THROUGH 530 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.2806 -8.6704 61.9098 REMARK 3 T TENSOR REMARK 3 T11: 0.3577 T22: 0.3498 REMARK 3 T33: 0.1820 T12: 0.1293 REMARK 3 T13: -0.0545 T23: 0.0798 REMARK 3 L TENSOR REMARK 3 L11: 0.0189 L22: 0.0174 REMARK 3 L33: 0.0118 L12: -0.0190 REMARK 3 L13: 0.0154 L23: -0.0153 REMARK 3 S TENSOR REMARK 3 S11: 0.0218 S12: -0.1246 S13: -0.0388 REMARK 3 S21: 0.1101 S22: -0.0093 S23: -0.0432 REMARK 3 S31: -0.0174 S32: 0.0349 S33: 0.0073 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 532 THROUGH 536 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.3643 -16.7258 48.3821 REMARK 3 T TENSOR REMARK 3 T11: 0.2012 T22: 0.2014 REMARK 3 T33: 0.2723 T12: 0.0398 REMARK 3 T13: 0.0534 T23: 0.0113 REMARK 3 L TENSOR REMARK 3 L11: -0.0001 L22: 0.0087 REMARK 3 L33: 0.0027 L12: 0.0025 REMARK 3 L13: 0.0018 L23: 0.0028 REMARK 3 S TENSOR REMARK 3 S11: -0.1664 S12: -0.0227 S13: -0.0686 REMARK 3 S21: 0.0363 S22: -0.0059 S23: -0.0365 REMARK 3 S31: 0.0681 S32: -0.0040 S33: 0.0000 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 537 THROUGH 542 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.5636 -13.1452 35.1589 REMARK 3 T TENSOR REMARK 3 T11: 0.5514 T22: 0.3750 REMARK 3 T33: 0.2703 T12: -0.1121 REMARK 3 T13: 0.0231 T23: -0.0644 REMARK 3 L TENSOR REMARK 3 L11: 0.0043 L22: 0.0031 REMARK 3 L33: 0.0071 L12: -0.0068 REMARK 3 L13: -0.0001 L23: -0.0010 REMARK 3 S TENSOR REMARK 3 S11: -0.1072 S12: 0.0650 S13: -0.0184 REMARK 3 S21: 0.0248 S22: 0.0022 S23: 0.0802 REMARK 3 S31: -0.0152 S32: -0.0955 S33: 0.0000 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'V' AND (RESID 60 THROUGH 70 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.3829 1.8303 58.8017 REMARK 3 T TENSOR REMARK 3 T11: 0.3168 T22: 0.2631 REMARK 3 T33: 0.1521 T12: 0.0809 REMARK 3 T13: -0.0068 T23: -0.0060 REMARK 3 L TENSOR REMARK 3 L11: 0.0109 L22: 0.0162 REMARK 3 L33: 0.0082 L12: -0.0172 REMARK 3 L13: -0.0114 L23: 0.0165 REMARK 3 S TENSOR REMARK 3 S11: -0.0071 S12: -0.1612 S13: -0.0344 REMARK 3 S21: 0.0484 S22: 0.0284 S23: 0.0171 REMARK 3 S31: -0.0700 S32: -0.0927 S33: -0.0000 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'V' AND (RESID 71 THROUGH 78 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.2503 -6.2917 44.2268 REMARK 3 T TENSOR REMARK 3 T11: 0.1811 T22: 0.2318 REMARK 3 T33: 0.1856 T12: 0.0268 REMARK 3 T13: 0.0026 T23: 0.0489 REMARK 3 L TENSOR REMARK 3 L11: 0.0461 L22: 0.0773 REMARK 3 L33: 0.0175 L12: 0.0519 REMARK 3 L13: -0.0163 L23: -0.0368 REMARK 3 S TENSOR REMARK 3 S11: -0.1605 S12: 0.0276 S13: 0.0600 REMARK 3 S21: 0.0373 S22: 0.1438 S23: 0.0294 REMARK 3 S31: -0.0654 S32: 0.0795 S33: 0.0013 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'V' AND (RESID 79 THROUGH 121 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.5589 -4.2288 44.6926 REMARK 3 T TENSOR REMARK 3 T11: 0.1911 T22: 0.1755 REMARK 3 T33: 0.1631 T12: 0.0328 REMARK 3 T13: -0.0244 T23: 0.0182 REMARK 3 L TENSOR REMARK 3 L11: 0.4478 L22: 0.3444 REMARK 3 L33: 0.0764 L12: 0.2434 REMARK 3 L13: -0.1491 L23: -0.1872 REMARK 3 S TENSOR REMARK 3 S11: -0.1712 S12: -0.0816 S13: 0.0404 REMARK 3 S21: 0.0372 S22: 0.0774 S23: -0.0434 REMARK 3 S31: -0.0828 S32: -0.0016 S33: -0.0525 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'V' AND (RESID 122 THROUGH 141 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.3401 2.6041 42.1134 REMARK 3 T TENSOR REMARK 3 T11: 0.2470 T22: 0.1990 REMARK 3 T33: 0.2528 T12: 0.0561 REMARK 3 T13: -0.0251 T23: 0.0377 REMARK 3 L TENSOR REMARK 3 L11: 0.0618 L22: 0.0884 REMARK 3 L33: 0.1823 L12: 0.0644 REMARK 3 L13: 0.1253 L23: 0.1114 REMARK 3 S TENSOR REMARK 3 S11: -0.1377 S12: 0.0264 S13: 0.1221 REMARK 3 S21: 0.0775 S22: 0.0683 S23: -0.0547 REMARK 3 S31: -0.1984 S32: 0.0438 S33: 0.0010 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'V' AND (RESID 142 THROUGH 169 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.0540 3.7008 33.6225 REMARK 3 T TENSOR REMARK 3 T11: 0.1572 T22: 0.2416 REMARK 3 T33: 0.2131 T12: 0.0165 REMARK 3 T13: -0.0165 T23: 0.0514 REMARK 3 L TENSOR REMARK 3 L11: 0.0155 L22: 0.2050 REMARK 3 L33: 0.1460 L12: 0.0728 REMARK 3 L13: 0.0489 L23: 0.1612 REMARK 3 S TENSOR REMARK 3 S11: -0.0329 S12: 0.0027 S13: -0.0038 REMARK 3 S21: -0.0011 S22: 0.0871 S23: 0.0056 REMARK 3 S31: -0.0800 S32: -0.1065 S33: -0.0008 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'V' AND (RESID 170 THROUGH 177 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.7751 3.8156 27.8986 REMARK 3 T TENSOR REMARK 3 T11: 0.1753 T22: 0.3725 REMARK 3 T33: 0.5290 T12: 0.0159 REMARK 3 T13: -0.0243 T23: -0.0276 REMARK 3 L TENSOR REMARK 3 L11: 0.0015 L22: 0.0242 REMARK 3 L33: 0.0224 L12: -0.0031 REMARK 3 L13: 0.0008 L23: 0.0007 REMARK 3 S TENSOR REMARK 3 S11: 0.0691 S12: 0.1004 S13: -0.0715 REMARK 3 S21: 0.0267 S22: 0.0948 S23: -0.1714 REMARK 3 S31: 0.0534 S32: 0.0933 S33: 0.0088 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN 'V' AND (RESID 178 THROUGH 193 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.8935 11.7301 30.6485 REMARK 3 T TENSOR REMARK 3 T11: 0.1923 T22: 0.3011 REMARK 3 T33: 0.3845 T12: -0.0137 REMARK 3 T13: -0.0300 T23: 0.0064 REMARK 3 L TENSOR REMARK 3 L11: 0.0192 L22: 0.0438 REMARK 3 L33: 0.0380 L12: -0.0274 REMARK 3 L13: 0.0049 L23: 0.0210 REMARK 3 S TENSOR REMARK 3 S11: -0.0003 S12: -0.1093 S13: 0.1307 REMARK 3 S21: 0.1101 S22: 0.0580 S23: -0.3075 REMARK 3 S31: -0.1619 S32: 0.1169 S33: 0.0001 REMARK 3 TLS GROUP : 26 REMARK 3 SELECTION: CHAIN 'V' AND (RESID 194 THROUGH 210 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.6545 13.4583 48.2393 REMARK 3 T TENSOR REMARK 3 T11: 0.5140 T22: 0.2906 REMARK 3 T33: 0.3893 T12: -0.1126 REMARK 3 T13: 0.0271 T23: -0.0601 REMARK 3 L TENSOR REMARK 3 L11: -0.0027 L22: 0.0220 REMARK 3 L33: 0.0040 L12: -0.0030 REMARK 3 L13: -0.0056 L23: -0.0023 REMARK 3 S TENSOR REMARK 3 S11: 0.1003 S12: -0.0994 S13: 0.0811 REMARK 3 S21: 0.0226 S22: -0.0396 S23: 0.0341 REMARK 3 S31: -0.0721 S32: 0.0628 S33: -0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6I7Q COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-NOV-18. REMARK 100 THE DEPOSITION ID IS D_1200012962. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-DEC-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97627 REMARK 200 MONOCHROMATOR : SI 111 REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : DIALS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45358 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.798 REMARK 200 RESOLUTION RANGE LOW (A) : 59.560 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.700 REMARK 200 R MERGE (I) : 0.08700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.80 REMARK 200 R MERGE FOR SHELL (I) : 1.04200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1LQB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.77 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M CACODYL-NA PH 5.8, 0.1M MG REMARK 280 FORMATE, 50 MM CYSTAMINE, 22 % PEG3350, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 68.18800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 68.18800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 40.91350 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.37900 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 40.91350 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.37900 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 68.18800 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 40.91350 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 43.37900 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 68.18800 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 40.91350 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 43.37900 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6660 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18480 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -46.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C, H, V REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN B 106 REMARK 465 ASP B 107 REMARK 465 SER B 108 REMARK 465 GLY B 109 REMARK 465 SER B 110 REMARK 465 SER B 111 REMARK 465 ALA B 112 REMARK 465 ASN B 113 REMARK 465 GLU B 114 REMARK 465 GLN B 115 REMARK 465 ALA B 116 REMARK 465 VAL B 117 REMARK 465 GLN B 118 REMARK 465 GLU H 523 REMARK 465 LEU H 524 REMARK 465 ASP H 525 REMARK 465 MET V 54 REMARK 465 GLU V 55 REMARK 465 ALA V 56 REMARK 465 GLY V 57 REMARK 465 ARG V 58 REMARK 465 PRO V 59 REMARK 465 MET V 211 REMARK 465 GLY V 212 REMARK 465 ASP V 213 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN B 49 CG CD OE1 NE2 REMARK 470 ASP B 82 CG OD1 OD2 REMARK 470 ASP B 83 CG OD1 OD2 REMARK 470 SER C 16 OG REMARK 470 GLN C 51 CG CD OE1 NE2 REMARK 470 GLU C 56 CG CD OE1 OE2 REMARK 470 GLU V 199 CG CD OE1 OE2 REMARK 470 HIS V 208 CG ND1 CD2 CE1 NE2 REMARK 470 GLN V 209 CG CD OE1 NE2 REMARK 470 ARG V 210 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH22 ARG C 33 O SER C 47 1.57 REMARK 500 NH2 ARG C 33 O SER C 47 2.12 REMARK 500 OE2 GLU V 70 NH1 ARG V 113 2.13 REMARK 500 NH2 ARG C 33 O SER C 47 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG V 113 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS B 10 -121.37 56.72 REMARK 500 ASP B 47 -129.00 53.62 REMARK 500 ASP B 47 -129.23 53.62 REMARK 500 ALA B 71 76.30 -158.58 REMARK 500 ASP B 82 -126.00 67.59 REMARK 500 GLN C 51 -75.77 -76.15 REMARK 500 SER V 111 -165.75 -116.06 REMARK 500 SER V 139 -132.97 -100.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL V 301 DBREF 6I7Q B 1 118 UNP Q15370 ELOB_HUMAN 1 118 DBREF 6I7Q C 17 112 UNP Q2KII4 ELOC_BOVIN 17 112 DBREF 6I7Q H 523 542 UNP Q99814 EPAS1_HUMAN 523 542 DBREF 6I7Q V 54 213 UNP P40337 VHL_HUMAN 1 160 SEQADV 6I7Q SER C 16 UNP Q2KII4 EXPRESSION TAG SEQADV 6I7Q CYS H 542 UNP Q99814 LEU 542 CONFLICT SEQRES 1 B 118 MET ASP VAL PHE LEU MET ILE ARG ARG HIS LYS THR THR SEQRES 2 B 118 ILE PHE THR ASP ALA LYS GLU SER SER THR VAL PHE GLU SEQRES 3 B 118 LEU LYS ARG ILE VAL GLU GLY ILE LEU LYS ARG PRO PRO SEQRES 4 B 118 ASP GLU GLN ARG LEU TYR LYS ASP ASP GLN LEU LEU ASP SEQRES 5 B 118 ASP GLY LYS THR LEU GLY GLU CYS GLY PHE THR SER GLN SEQRES 6 B 118 THR ALA ARG PRO GLN ALA PRO ALA THR VAL GLY LEU ALA SEQRES 7 B 118 PHE ARG ALA ASP ASP THR PHE GLU ALA LEU CSD ILE GLU SEQRES 8 B 118 PRO PHE SER SER PRO PRO GLU LEU PRO ASP VAL MET LYS SEQRES 9 B 118 PRO GLN ASP SER GLY SER SER ALA ASN GLU GLN ALA VAL SEQRES 10 B 118 GLN SEQRES 1 C 97 SER MET TYR VAL LYS LEU ILE SER SER ASP GLY HIS GLU SEQRES 2 C 97 PHE ILE VAL LYS ARG GLU HIS ALA LEU THR SER GLY THR SEQRES 3 C 97 ILE LYS ALA MET LEU SER GLY PRO GLY GLN PHE ALA GLU SEQRES 4 C 97 ASN GLU THR ASN GLU VAL ASN PHE ARG GLU ILE PRO SER SEQRES 5 C 97 HIS VAL LEU SER LYS VAL CYS MET TYR PHE THR TYR LYS SEQRES 6 C 97 VAL ARG TYR THR ASN SER SER THR GLU ILE PRO GLU PHE SEQRES 7 C 97 PRO ILE ALA PRO GLU ILE ALA LEU GLU LEU LEU MET ALA SEQRES 8 C 97 ALA ASN PHE LEU ASP CYS SEQRES 1 H 20 GLU LEU ASP LEU GLU THR LEU ALA HYP TYR ILE PRO MET SEQRES 2 H 20 ASP GLY GLU ASP PHE GLN CYS SEQRES 1 V 160 MET GLU ALA GLY ARG PRO ARG PRO VAL LEU ARG SER VAL SEQRES 2 V 160 ASN SER ARG GLU PRO SER GLN VAL ILE PHE CYS ASN ARG SEQRES 3 V 160 SER PRO ARG VAL VAL LEU PRO VAL TRP LEU ASN PHE ASP SEQRES 4 V 160 GLY GLU PRO GLN PRO TYR PRO THR LEU PRO PRO GLY THR SEQRES 5 V 160 GLY ARG ARG ILE HIS SER TYR ARG GLY HIS LEU TRP LEU SEQRES 6 V 160 PHE ARG ASP ALA GLY THR HIS ASP GLY LEU LEU VAL ASN SEQRES 7 V 160 GLN THR GLU LEU PHE VAL PRO SER LEU ASN VAL ASP GLY SEQRES 8 V 160 GLN PRO ILE PHE ALA ASN ILE THR LEU PRO VAL TYR THR SEQRES 9 V 160 LEU LYS GLU ARG CYS LEU GLN VAL VAL ARG SER LEU VAL SEQRES 10 V 160 LYS PRO GLU ASN TYR ARG ARG LEU ASP ILE VAL ARG SER SEQRES 11 V 160 LEU TYR GLU ASP LEU GLU ASP HIS PRO ASN VAL GLN LYS SEQRES 12 V 160 ASP LEU GLU ARG LEU THR GLN GLU ARG ILE ALA HIS GLN SEQRES 13 V 160 ARG MET GLY ASP MODRES 6I7Q CSD B 89 CYS MODIFIED RESIDUE MODRES 6I7Q HYP H 531 PRO MODIFIED RESIDUE HET CSD B 89 12 HET HYP H 531 15 HET GOL V 301 14 HETNAM CSD 3-SULFINOALANINE HETNAM HYP 4-HYDROXYPROLINE HETNAM GOL GLYCEROL HETSYN CSD S-CYSTEINESULFINIC ACID; S-SULFINOCYSTEINE HETSYN HYP HYDROXYPROLINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 CSD C3 H7 N O4 S FORMUL 3 HYP C5 H9 N O3 FORMUL 5 GOL C3 H8 O3 FORMUL 6 HOH *320(H2 O) HELIX 1 AA1 THR B 23 LYS B 36 1 14 HELIX 2 AA2 PRO B 38 ASP B 40 5 3 HELIX 3 AA3 PRO B 100 LYS B 104 5 5 HELIX 4 AA4 ARG C 33 LEU C 37 1 5 HELIX 5 AA5 SER C 39 LEU C 46 1 8 HELIX 6 AA6 PRO C 66 THR C 84 1 19 HELIX 7 AA7 ALA C 96 ASP C 111 1 16 HELIX 8 AA8 THR V 157 VAL V 170 1 14 HELIX 9 AA9 LYS V 171 LEU V 178 5 8 HELIX 10 AB1 ARG V 182 ASP V 190 1 9 HELIX 11 AB2 ASN V 193 ARG V 210 1 18 SHEET 1 AA1 4 GLN B 49 LEU B 50 0 SHEET 2 AA1 4 GLN B 42 LYS B 46 -1 N LYS B 46 O GLN B 49 SHEET 3 AA1 4 ALA B 73 ALA B 81 -1 O GLY B 76 N TYR B 45 SHEET 4 AA1 4 THR B 84 PHE B 85 -1 O THR B 84 N ALA B 81 SHEET 1 AA2 8 GLN B 49 LEU B 50 0 SHEET 2 AA2 8 GLN B 42 LYS B 46 -1 N LYS B 46 O GLN B 49 SHEET 3 AA2 8 ALA B 73 ALA B 81 -1 O GLY B 76 N TYR B 45 SHEET 4 AA2 8 ASP B 2 ARG B 9 1 N MET B 6 O VAL B 75 SHEET 5 AA2 8 THR B 12 LYS B 19 -1 O ALA B 18 N VAL B 3 SHEET 6 AA2 8 GLU C 28 LYS C 32 1 O ILE C 30 N THR B 13 SHEET 7 AA2 8 TYR C 18 ILE C 22 -1 N VAL C 19 O VAL C 31 SHEET 8 AA2 8 GLU C 59 ASN C 61 1 O VAL C 60 N LYS C 20 SHEET 1 AA3 5 PHE H 540 GLN H 541 0 SHEET 2 AA3 5 THR V 105 TYR V 112 -1 O GLY V 106 N PHE H 540 SHEET 3 AA3 5 PRO V 71 ASN V 78 -1 N PHE V 76 O ARG V 107 SHEET 4 AA3 5 ILE V 147 THR V 152 1 O ILE V 151 N CYS V 77 SHEET 5 AA3 5 LEU V 129 VAL V 130 -1 N LEU V 129 O THR V 152 SHEET 1 AA4 3 PRO V 95 PRO V 97 0 SHEET 2 AA4 3 VAL V 84 LEU V 89 -1 N TRP V 88 O GLN V 96 SHEET 3 AA4 3 LEU V 116 ASP V 121 -1 O ARG V 120 N LEU V 85 SSBOND 1 CYS H 542 CYS V 77 1555 1555 1.99 LINK C LEU B 88 N CSD B 89 1555 1555 1.35 LINK C CSD B 89 N ILE B 90 1555 1555 1.32 LINK C ALA H 530 N HYP H 531 1555 1555 1.31 LINK C HYP H 531 N TYR H 532 1555 1555 1.33 SITE 1 AC1 6 THR V 124 ARG V 161 HOH V 417 HOH V 421 SITE 2 AC1 6 HOH V 482 HOH V 486 CRYST1 81.827 86.758 136.376 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012221 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011526 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007333 0.00000