HEADER HYDROLASE 22-NOV-18 6I9A TITLE PORPHYROMONAS GINGIVALIS GINGIPAIN K (KGP) IN COMPLEX WITH INHIBITOR TITLE 2 KYT-36 COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYS-GINGIPAIN W83; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: LYSINE SPECIFIC CYSTEINE PROTEASE,LYSINE-SPECIFIC CYSTEINE COMPND 5 PROTEINASE,PORPHYPAIN,PRTK48; COMPND 6 EC: 3.4.22.47; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PORPHYROMONAS GINGIVALIS; SOURCE 3 ORGANISM_TAXID: 837; SOURCE 4 GENE: KGP, PRTK, PRTP; SOURCE 5 EXPRESSION_SYSTEM: PORPHYROMONAS GINGIVALIS ATCC 33277; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 431947 KEYWDS PEPTIDASE INHIBITOR, CUSTEINE PEPTIDASE, GINGIPAIN, KEYWDS 2 PERIODONTOPATHOGEN, PERIODONTAL DISEASE, PORPHYROMONAS GINGIVALIS, KEYWDS 3 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR F.X.GOMIS-RUTH,T.GUEVARA,A.ROFDRIGUEZ-BANQUERI REVDAT 5 24-JAN-24 6I9A 1 LINK REVDAT 4 03-APR-19 6I9A 1 JRNL REVDAT 3 27-MAR-19 6I9A 1 REMARK REVDAT 2 20-MAR-19 6I9A 1 REMARK REVDAT 1 13-MAR-19 6I9A 0 JRNL AUTH T.GUEVARA,A.RODRIGUEZ-BANQUERI,A.M.LASICA,M.KSIAZEK, JRNL AUTH 2 B.A.POTEMPA,J.POTEMPA,F.X.GOMIS-RUTH JRNL TITL STRUCTURAL DETERMINANTS OF INHIBITION OF PORPHYROMONAS JRNL TITL 2 GINGIVALIS GINGIPAIN K BY KYT-36, A POTENT, SELECTIVE, AND JRNL TITL 3 BIOAVAILABLE PEPTIDASE INHIBITOR. JRNL REF SCI REP V. 9 4935 2019 JRNL REFN ESSN 2045-2322 JRNL PMID 30894633 JRNL DOI 10.1038/S41598-019-41354-3 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.POMOWSKI,I.USON,Z.NOWAKOWSKA,F.VEILLARD,M.N.SZTUKOWSKA, REMARK 1 AUTH 2 T.GUEVARA,T.GOULAS,D.MIZGALSKA,M.NOWAK,B.POTEMPA, REMARK 1 AUTH 3 J.A.HUNTINGTON,J.POTEMPA,F.X.GOMIS-RUETH REMARK 1 TITL STRUCTURAL INSIGHTS UNRAVEL THE ZYMOGENIC MECHANISM OF THE REMARK 1 TITL 2 VIRULENCE FACTOR GINGIPAIN K FROM REMARK 1 REF J. BIOL. CHEM. V. 292 5724 2017 REMARK 1 REFN ESSN 1083-351X REMARK 1 PMID 28196869 REMARK 1 DOI 10.1074/JBC.M117.776724 REMARK 1 REFERENCE 2 REMARK 1 AUTH I.DE DIEGO,F.VEILLARD,M.N.SZTUKOWSKA,T.GUEVARA,B.POTEMPA, REMARK 1 AUTH 2 A.POMOWSKI,J.A.HUNTINGTON,J.POTEMPA,F.X.GOMIS-RUETH REMARK 1 TITL STRUCTURE AND MECHANISM OF CYSTEINE PEPTIDASE GINGIPAIN K REMARK 1 TITL 2 (KGP), A MAJOR VIRULENCE FACTOR OF PORPHYROMONAS GINGIVALIS REMARK 1 TITL 3 IN PERIODONTITIS. REMARK 1 REF J. BIOL. CHEM. V. 289 32291 2014 REMARK 1 REFN ESSN 1083-351X REMARK 1 PMID 25266723 REMARK 1 DOI 10.1074/JBC.M114.602052 REMARK 2 REMARK 2 RESOLUTION. 1.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.3 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 72.19 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.8 REMARK 3 NUMBER OF REFLECTIONS : 290671 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.146 REMARK 3 R VALUE (WORKING SET) : 0.146 REMARK 3 FREE R VALUE : 0.148 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 0.390 REMARK 3 FREE R VALUE TEST SET COUNT : 1120 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 50 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.20 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.21 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 61.04 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 5814 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.1873 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 5790 REMARK 3 BIN R VALUE (WORKING SET) : 0.1871 REMARK 3 BIN FREE R VALUE : 0.2375 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 0.41 REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7048 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 178 REMARK 3 SOLVENT ATOMS : 1580 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 10.78 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.03810 REMARK 3 B22 (A**2) : -3.67470 REMARK 3 B33 (A**2) : 2.63660 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.120 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.037 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.035 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.034 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.032 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.972 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 7734 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 10559 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 3509 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 1335 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 7516 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 0 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 996 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : 49 ; 1.000 ; HARMONIC REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 10684 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.012 REMARK 3 BOND ANGLES (DEGREES) : 1.17 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 5.80 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.55 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: {A|229 - 600 A|994 - 1001} REMARK 3 ORIGIN FOR THE GROUP (A): 5.2555 -17.5640 -7.5755 REMARK 3 T TENSOR REMARK 3 T11: 0.0105 T22: 0.0163 REMARK 3 T33: 0.0154 T12: 0.0026 REMARK 3 T13: 0.0013 T23: 0.0033 REMARK 3 L TENSOR REMARK 3 L11: 0.2651 L22: 0.2162 REMARK 3 L33: 0.3896 L12: -0.0156 REMARK 3 L13: -0.0096 L23: -0.0353 REMARK 3 S TENSOR REMARK 3 S11: 0.0030 S12: 0.0106 S13: 0.0011 REMARK 3 S21: -0.0096 S22: 0.0050 S23: 0.0088 REMARK 3 S31: -0.0278 S32: 0.0088 S33: -0.0080 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: {A|601 - 681} REMARK 3 ORIGIN FOR THE GROUP (A): 8.0087 -29.8032 -35.0677 REMARK 3 T TENSOR REMARK 3 T11: 0.0150 T22: 0.0183 REMARK 3 T33: -0.0003 T12: 0.0036 REMARK 3 T13: -0.0071 T23: -0.0040 REMARK 3 L TENSOR REMARK 3 L11: 0.2430 L22: 0.1044 REMARK 3 L33: 0.3049 L12: -0.0568 REMARK 3 L13: 0.0620 L23: 0.1813 REMARK 3 S TENSOR REMARK 3 S11: 0.0001 S12: 0.0038 S13: 0.0025 REMARK 3 S21: -0.0071 S22: -0.0008 S23: -0.0024 REMARK 3 S31: 0.0006 S32: 0.0001 S33: 0.0007 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: {B|229 - 600 B|994 - 1001} REMARK 3 ORIGIN FOR THE GROUP (A): -3.5231 -59.1183 22.5523 REMARK 3 T TENSOR REMARK 3 T11: 0.0121 T22: 0.0139 REMARK 3 T33: 0.0165 T12: -0.0005 REMARK 3 T13: -0.0026 T23: 0.0007 REMARK 3 L TENSOR REMARK 3 L11: 0.2532 L22: 0.2011 REMARK 3 L33: 0.3740 L12: 0.0092 REMARK 3 L13: 0.0434 L23: 0.0125 REMARK 3 S TENSOR REMARK 3 S11: 0.0092 S12: -0.0058 S13: 0.0027 REMARK 3 S21: -0.0060 S22: -0.0087 S23: 0.0104 REMARK 3 S31: 0.0024 S32: -0.0058 S33: -0.0005 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: {B|601 - 681} REMARK 3 ORIGIN FOR THE GROUP (A): 8.4877 -54.2267 -4.1604 REMARK 3 T TENSOR REMARK 3 T11: 0.0134 T22: 0.0191 REMARK 3 T33: 0.0020 T12: 0.0010 REMARK 3 T13: 0.0042 T23: -0.0016 REMARK 3 L TENSOR REMARK 3 L11: 0.1360 L22: 0.1520 REMARK 3 L33: 0.3023 L12: 0.0110 REMARK 3 L13: -0.2207 L23: -0.0612 REMARK 3 S TENSOR REMARK 3 S11: 0.0001 S12: 0.0057 S13: 0.0046 REMARK 3 S21: -0.0068 S22: 0.0004 S23: 0.0021 REMARK 3 S31: -0.0044 S32: 0.0018 S33: -0.0005 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6I9A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-NOV-18. REMARK 100 THE DEPOSITION ID IS D_1200013041. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-SEP-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALBA REMARK 200 BEAMLINE : XALOC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 290672 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.200 REMARK 200 RESOLUTION RANGE LOW (A) : 72.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.8 REMARK 200 DATA REDUNDANCY : 10.10 REMARK 200 R MERGE (I) : 0.06500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.27 REMARK 200 COMPLETENESS FOR SHELL (%) : 75.2 REMARK 200 DATA REDUNDANCY IN SHELL : 5.20 REMARK 200 R MERGE FOR SHELL (I) : 0.72600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4RBM REMARK 200 REMARK 200 REMARK: ORTHORHOMBIC REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 8000, 0.1 M HEPES, PH 7.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 43.33500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.60500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.52500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 64.60500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 43.33500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.52500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 682 REMARK 465 PRO A 683 REMARK 465 HIS A 684 REMARK 465 HIS A 685 REMARK 465 HIS A 686 REMARK 465 HIS A 687 REMARK 465 HIS A 688 REMARK 465 HIS A 689 REMARK 465 GLU B 682 REMARK 465 PRO B 683 REMARK 465 HIS B 684 REMARK 465 HIS B 685 REMARK 465 HIS B 686 REMARK 465 HIS B 687 REMARK 465 HIS B 688 REMARK 465 HIS B 689 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG A 597 UNK UNX A 701 1.63 REMARK 500 NH2 ARG B 597 UNK UNX B 701 1.75 REMARK 500 OD1 ASP A 271 UNK UNX A 702 1.86 REMARK 500 OD1 ASP B 271 UNK UNX B 702 1.89 REMARK 500 SG CYS A 477 CBN H8E A 707 2.00 REMARK 500 NE2 HIS B 273 UNK UNX B 702 2.00 REMARK 500 UNK UNX B 702 O HOH B 1222 2.01 REMARK 500 SG CYS B 477 CBN H8E B 707 2.03 REMARK 500 NE2 HIS A 273 UNK UNX A 702 2.04 REMARK 500 UNK UNX A 702 O HOH A 895 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 303 48.87 -150.39 REMARK 500 VAL A 395 -43.72 -133.52 REMARK 500 TYR A 407 -52.37 -134.39 REMARK 500 ALA A 443 -144.15 164.63 REMARK 500 ASP A 452 104.69 -163.22 REMARK 500 ILE A 478 8.06 51.82 REMARK 500 ILE A 576 -24.37 -152.00 REMARK 500 ALA A 598 -151.10 62.96 REMARK 500 ALA B 303 50.11 -150.98 REMARK 500 VAL B 395 -46.70 -132.75 REMARK 500 TYR B 407 -55.58 -133.18 REMARK 500 ALA B 443 -145.86 164.66 REMARK 500 ASP B 452 104.23 -162.38 REMARK 500 ILE B 478 11.07 47.26 REMARK 500 ILE B 576 -29.18 -153.15 REMARK 500 ALA B 598 -152.52 61.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1584 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH A1585 DISTANCE = 5.92 ANGSTROMS REMARK 525 HOH A1586 DISTANCE = 6.10 ANGSTROMS REMARK 525 HOH A1587 DISTANCE = 6.42 ANGSTROMS REMARK 525 HOH A1588 DISTANCE = 6.42 ANGSTROMS REMARK 525 HOH A1589 DISTANCE = 6.46 ANGSTROMS REMARK 525 HOH A1590 DISTANCE = 6.80 ANGSTROMS REMARK 525 HOH B1583 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH B1584 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH B1585 DISTANCE = 5.93 ANGSTROMS REMARK 525 HOH B1586 DISTANCE = 6.12 ANGSTROMS REMARK 525 HOH B1587 DISTANCE = 6.12 ANGSTROMS REMARK 525 HOH B1588 DISTANCE = 6.14 ANGSTROMS REMARK 525 HOH B1589 DISTANCE = 6.42 ANGSTROMS REMARK 525 HOH B1590 DISTANCE = 6.61 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 706 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 313 OD1 REMARK 620 2 ASP A 313 OD2 52.3 REMARK 620 3 PHE A 482 O 81.1 133.4 REMARK 620 4 GLU A 491 OE1 126.3 111.4 93.4 REMARK 620 5 GLU A 491 OE2 75.5 78.3 89.4 51.0 REMARK 620 6 HOH A1063 O 151.9 147.3 76.7 72.5 120.8 REMARK 620 7 HOH A1136 O 73.3 86.9 80.6 158.7 148.3 86.2 REMARK 620 8 HOH A1191 O 122.1 72.9 150.0 87.0 113.4 74.9 88.1 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 705 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 337 OD1 REMARK 620 2 ASP A 339 OD1 87.7 REMARK 620 3 PHE A 341 O 169.0 89.0 REMARK 620 4 GLU A 343 OE1 94.8 150.7 93.2 REMARK 620 5 GLU A 343 OE2 83.6 156.2 95.3 52.6 REMARK 620 6 HOH A 907 O 93.3 74.0 95.9 76.6 128.5 REMARK 620 7 HOH A 919 O 81.3 78.2 87.7 131.1 78.6 152.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 704 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR A 402 OH REMARK 620 2 VAL A 521 O 94.4 REMARK 620 3 THR A 536 OG1 93.1 97.1 REMARK 620 4 SER A 537 O 167.1 92.9 96.6 REMARK 620 5 ASP A 542 OD2 80.4 88.7 171.7 89.2 REMARK 620 6 HOH A1150 O 90.7 174.0 85.7 81.5 89.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 703 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 543 O REMARK 620 2 THR A 544 O 76.6 REMARK 620 3 LEU A 546 O 102.8 95.7 REMARK 620 4 SER A 549 O 91.7 168.0 84.2 REMARK 620 5 TYR A 550 O 82.0 98.7 165.4 81.9 REMARK 620 6 ASN A 551 OD1 168.6 108.0 87.2 83.9 87.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 706 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 313 OD1 REMARK 620 2 ASP B 313 OD2 51.7 REMARK 620 3 PHE B 482 O 80.6 132.3 REMARK 620 4 GLU B 491 OE1 127.0 111.5 94.3 REMARK 620 5 GLU B 491 OE2 75.9 78.5 89.1 51.2 REMARK 620 6 HOH B1043 O 150.8 147.7 76.8 73.3 121.5 REMARK 620 7 HOH B1137 O 72.6 86.2 80.7 159.0 148.0 85.7 REMARK 620 8 HOH B1191 O 121.0 72.5 151.1 87.1 113.5 76.0 87.8 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 705 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 337 OD1 REMARK 620 2 ASP B 339 OD1 87.4 REMARK 620 3 PHE B 341 O 165.3 87.8 REMARK 620 4 GLU B 343 OE1 81.9 153.7 96.5 REMARK 620 5 GLU B 343 OE2 94.3 152.7 96.3 52.7 REMARK 620 6 HOH B 881 O 95.0 76.2 97.3 128.4 76.5 REMARK 620 7 HOH B 913 O 80.9 77.0 84.5 77.7 130.2 153.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 704 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR B 402 OH REMARK 620 2 VAL B 521 O 94.1 REMARK 620 3 THR B 536 OG1 92.7 96.9 REMARK 620 4 SER B 537 O 166.9 94.3 96.2 REMARK 620 5 ASP B 542 OD2 81.0 88.8 171.8 89.2 REMARK 620 6 HOH B1077 O 90.4 175.0 85.1 80.9 89.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 703 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA B 543 O REMARK 620 2 THR B 544 O 76.4 REMARK 620 3 LEU B 546 O 103.2 95.9 REMARK 620 4 SER B 549 O 91.9 168.1 84.7 REMARK 620 5 TYR B 550 O 81.5 98.8 165.3 81.2 REMARK 620 6 ASN B 551 OD1 168.5 107.9 87.2 84.0 87.3 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 704 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 705 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 706 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue H8E A 707 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EPE A 708 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 709 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 710 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 711 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 704 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 705 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 706 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue H8E B 707 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EPE B 708 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DTV B 709 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 710 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 711 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 712 DBREF 6I9A A 229 683 UNP Q51817 KGP83_PORGN 229 683 DBREF 6I9A B 229 683 UNP Q51817 KGP83_PORGN 229 683 SEQADV 6I9A HIS A 684 UNP Q51817 EXPRESSION TAG SEQADV 6I9A HIS A 685 UNP Q51817 EXPRESSION TAG SEQADV 6I9A HIS A 686 UNP Q51817 EXPRESSION TAG SEQADV 6I9A HIS A 687 UNP Q51817 EXPRESSION TAG SEQADV 6I9A HIS A 688 UNP Q51817 EXPRESSION TAG SEQADV 6I9A HIS A 689 UNP Q51817 EXPRESSION TAG SEQADV 6I9A HIS B 684 UNP Q51817 EXPRESSION TAG SEQADV 6I9A HIS B 685 UNP Q51817 EXPRESSION TAG SEQADV 6I9A HIS B 686 UNP Q51817 EXPRESSION TAG SEQADV 6I9A HIS B 687 UNP Q51817 EXPRESSION TAG SEQADV 6I9A HIS B 688 UNP Q51817 EXPRESSION TAG SEQADV 6I9A HIS B 689 UNP Q51817 EXPRESSION TAG SEQRES 1 A 461 ASP VAL TYR THR ASP HIS GLY ASP LEU TYR ASN THR PRO SEQRES 2 A 461 VAL ARG MET LEU VAL VAL ALA GLY ALA LYS PHE LYS GLU SEQRES 3 A 461 ALA LEU LYS PRO TRP LEU THR TRP LYS ALA GLN LYS GLY SEQRES 4 A 461 PHE TYR LEU ASP VAL HIS TYR THR ASP GLU ALA GLU VAL SEQRES 5 A 461 GLY THR THR ASN ALA SER ILE LYS ALA PHE ILE HIS LYS SEQRES 6 A 461 LYS TYR ASN ASP GLY LEU ALA ALA SER ALA ALA PRO VAL SEQRES 7 A 461 PHE LEU ALA LEU VAL GLY ASP THR ASP VAL ILE SER GLY SEQRES 8 A 461 GLU LYS GLY LYS LYS THR LYS LYS VAL THR ASP LEU TYR SEQRES 9 A 461 TYR SER ALA VAL ASP GLY ASP TYR PHE PRO GLU MET TYR SEQRES 10 A 461 THR PHE ARG MET SER ALA SER SER PRO GLU GLU LEU THR SEQRES 11 A 461 ASN ILE ILE ASP LYS VAL LEU MET TYR GLU LYS ALA THR SEQRES 12 A 461 MET PRO ASP LYS SER TYR LEU GLU LYS VAL LEU LEU ILE SEQRES 13 A 461 ALA GLY ALA ASP TYR SER TRP ASN SER GLN VAL GLY GLN SEQRES 14 A 461 PRO THR ILE LYS TYR GLY MET GLN TYR TYR TYR ASN GLN SEQRES 15 A 461 GLU HIS GLY TYR THR ASP VAL TYR ASN TYR LEU LYS ALA SEQRES 16 A 461 PRO TYR THR GLY CYS TYR SER HIS LEU ASN THR GLY VAL SEQRES 17 A 461 SER PHE ALA ASN TYR THR ALA HIS GLY SER GLU THR ALA SEQRES 18 A 461 TRP ALA ASP PRO LEU LEU THR THR SER GLN LEU LYS ALA SEQRES 19 A 461 LEU THR ASN LYS ASP LYS TYR PHE LEU ALA ILE GLY ASN SEQRES 20 A 461 CYS CYS ILE THR ALA GLN PHE ASP TYR VAL GLN PRO CYS SEQRES 21 A 461 PHE GLY GLU VAL ILE THR ARG VAL LYS GLU LYS GLY ALA SEQRES 22 A 461 TYR ALA TYR ILE GLY SER SER PRO ASN SER TYR TRP GLY SEQRES 23 A 461 GLU ASP TYR TYR TRP SER VAL GLY ALA ASN ALA VAL PHE SEQRES 24 A 461 GLY VAL GLN PRO THR PHE GLU GLY THR SER MET GLY SER SEQRES 25 A 461 TYR ASP ALA THR PHE LEU GLU ASP SER TYR ASN THR VAL SEQRES 26 A 461 ASN SER ILE MET TRP ALA GLY ASN LEU ALA ALA THR HIS SEQRES 27 A 461 ALA GLY ASN ILE GLY ASN ILE THR HIS ILE GLY ALA HIS SEQRES 28 A 461 TYR TYR TRP GLU ALA TYR HIS VAL LEU GLY ASP GLY SER SEQRES 29 A 461 VAL MET PRO TYR ARG ALA MET PRO LYS THR ASN THR TYR SEQRES 30 A 461 THR LEU PRO ALA SER LEU PRO GLN ASN GLN ALA SER TYR SEQRES 31 A 461 SER ILE GLN ALA SER ALA GLY SER TYR VAL ALA ILE SER SEQRES 32 A 461 LYS ASP GLY VAL LEU TYR GLY THR GLY VAL ALA ASN ALA SEQRES 33 A 461 SER GLY VAL ALA THR VAL SER MET THR LYS GLN ILE THR SEQRES 34 A 461 GLU ASN GLY ASN TYR ASP VAL VAL ILE THR ARG SER ASN SEQRES 35 A 461 TYR LEU PRO VAL ILE LYS GLN ILE GLN VAL GLY GLU PRO SEQRES 36 A 461 HIS HIS HIS HIS HIS HIS SEQRES 1 B 461 ASP VAL TYR THR ASP HIS GLY ASP LEU TYR ASN THR PRO SEQRES 2 B 461 VAL ARG MET LEU VAL VAL ALA GLY ALA LYS PHE LYS GLU SEQRES 3 B 461 ALA LEU LYS PRO TRP LEU THR TRP LYS ALA GLN LYS GLY SEQRES 4 B 461 PHE TYR LEU ASP VAL HIS TYR THR ASP GLU ALA GLU VAL SEQRES 5 B 461 GLY THR THR ASN ALA SER ILE LYS ALA PHE ILE HIS LYS SEQRES 6 B 461 LYS TYR ASN ASP GLY LEU ALA ALA SER ALA ALA PRO VAL SEQRES 7 B 461 PHE LEU ALA LEU VAL GLY ASP THR ASP VAL ILE SER GLY SEQRES 8 B 461 GLU LYS GLY LYS LYS THR LYS LYS VAL THR ASP LEU TYR SEQRES 9 B 461 TYR SER ALA VAL ASP GLY ASP TYR PHE PRO GLU MET TYR SEQRES 10 B 461 THR PHE ARG MET SER ALA SER SER PRO GLU GLU LEU THR SEQRES 11 B 461 ASN ILE ILE ASP LYS VAL LEU MET TYR GLU LYS ALA THR SEQRES 12 B 461 MET PRO ASP LYS SER TYR LEU GLU LYS VAL LEU LEU ILE SEQRES 13 B 461 ALA GLY ALA ASP TYR SER TRP ASN SER GLN VAL GLY GLN SEQRES 14 B 461 PRO THR ILE LYS TYR GLY MET GLN TYR TYR TYR ASN GLN SEQRES 15 B 461 GLU HIS GLY TYR THR ASP VAL TYR ASN TYR LEU LYS ALA SEQRES 16 B 461 PRO TYR THR GLY CYS TYR SER HIS LEU ASN THR GLY VAL SEQRES 17 B 461 SER PHE ALA ASN TYR THR ALA HIS GLY SER GLU THR ALA SEQRES 18 B 461 TRP ALA ASP PRO LEU LEU THR THR SER GLN LEU LYS ALA SEQRES 19 B 461 LEU THR ASN LYS ASP LYS TYR PHE LEU ALA ILE GLY ASN SEQRES 20 B 461 CYS CYS ILE THR ALA GLN PHE ASP TYR VAL GLN PRO CYS SEQRES 21 B 461 PHE GLY GLU VAL ILE THR ARG VAL LYS GLU LYS GLY ALA SEQRES 22 B 461 TYR ALA TYR ILE GLY SER SER PRO ASN SER TYR TRP GLY SEQRES 23 B 461 GLU ASP TYR TYR TRP SER VAL GLY ALA ASN ALA VAL PHE SEQRES 24 B 461 GLY VAL GLN PRO THR PHE GLU GLY THR SER MET GLY SER SEQRES 25 B 461 TYR ASP ALA THR PHE LEU GLU ASP SER TYR ASN THR VAL SEQRES 26 B 461 ASN SER ILE MET TRP ALA GLY ASN LEU ALA ALA THR HIS SEQRES 27 B 461 ALA GLY ASN ILE GLY ASN ILE THR HIS ILE GLY ALA HIS SEQRES 28 B 461 TYR TYR TRP GLU ALA TYR HIS VAL LEU GLY ASP GLY SER SEQRES 29 B 461 VAL MET PRO TYR ARG ALA MET PRO LYS THR ASN THR TYR SEQRES 30 B 461 THR LEU PRO ALA SER LEU PRO GLN ASN GLN ALA SER TYR SEQRES 31 B 461 SER ILE GLN ALA SER ALA GLY SER TYR VAL ALA ILE SER SEQRES 32 B 461 LYS ASP GLY VAL LEU TYR GLY THR GLY VAL ALA ASN ALA SEQRES 33 B 461 SER GLY VAL ALA THR VAL SER MET THR LYS GLN ILE THR SEQRES 34 B 461 GLU ASN GLY ASN TYR ASP VAL VAL ILE THR ARG SER ASN SEQRES 35 B 461 TYR LEU PRO VAL ILE LYS GLN ILE GLN VAL GLY GLU PRO SEQRES 36 B 461 HIS HIS HIS HIS HIS HIS HET UNX A 701 1 HET UNX A 702 1 HET NA A 703 1 HET NA A 704 1 HET CA A 705 1 HET CA A 706 1 HET H8E A 707 55 HET EPE A 708 30 HET GOL A 709 6 HET GOL A 710 6 HET GOL A 711 12 HET UNX B 701 1 HET UNX B 702 1 HET NA B 703 1 HET NA B 704 1 HET CA B 705 1 HET CA B 706 1 HET H8E B 707 46 HET EPE B 708 30 HET DTV B 709 8 HET GOL B 710 6 HET GOL B 711 6 HET GOL B 712 6 HETNAM UNX UNKNOWN ATOM OR ION HETNAM NA SODIUM ION HETNAM CA CALCIUM ION HETNAM H8E BENZYL-N-[(2S)-1-[[(3S)-7-AMINO-1-(BENZYLAMINO)-1,2- HETNAM 2 H8E DIOXOHEPTAN-3-YL]AMINO]-5-(2-METHYL-2- HETNAM 3 H8E PHENYLHYDRAZINYL)-1,5-DIOXOPENTAN-2-YL]CARBAMATE HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HETNAM GOL GLYCEROL HETNAM DTV (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL HETSYN EPE HEPES HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 UNX 4(X) FORMUL 5 NA 4(NA 1+) FORMUL 7 CA 4(CA 2+) FORMUL 9 H8E 2(C34 H42 N6 O6) FORMUL 10 EPE 2(C8 H18 N2 O4 S) FORMUL 11 GOL 6(C3 H8 O3) FORMUL 22 DTV C4 H10 O2 S2 FORMUL 26 HOH *1580(H2 O) HELIX 1 AA1 ASP A 229 HIS A 234 1 6 HELIX 2 AA2 PHE A 252 LYS A 266 1 15 HELIX 3 AA3 THR A 283 ALA A 301 1 19 HELIX 4 AA4 ASP A 330 ALA A 335 1 6 HELIX 5 AA5 SER A 353 ALA A 370 1 18 HELIX 6 AA6 ASP A 374 LEU A 378 5 5 HELIX 7 AA7 SER A 390 VAL A 395 1 6 HELIX 8 AA8 VAL A 395 TYR A 407 1 13 HELIX 9 AA9 ASN A 409 GLY A 413 5 5 HELIX 10 AB1 TYR A 429 GLY A 435 1 7 HELIX 11 AB2 THR A 457 LYS A 461 1 5 HELIX 12 AB3 CYS A 488 VAL A 496 1 9 HELIX 13 AB4 TYR A 512 GLY A 522 1 11 HELIX 14 AB5 GLY A 539 LEU A 546 1 8 HELIX 15 AB6 THR A 552 GLY A 571 1 20 HELIX 16 AB7 GLY A 577 ALA A 584 1 8 HELIX 17 AB8 VAL B 230 HIS B 234 1 5 HELIX 18 AB9 PHE B 252 LYS B 266 1 15 HELIX 19 AC1 THR B 283 ALA B 301 1 19 HELIX 20 AC2 ASP B 330 ALA B 335 1 6 HELIX 21 AC3 SER B 353 LYS B 369 1 17 HELIX 22 AC4 ASP B 374 LEU B 378 5 5 HELIX 23 AC5 SER B 390 VAL B 395 1 6 HELIX 24 AC6 VAL B 395 TYR B 407 1 13 HELIX 25 AC7 ASN B 409 GLY B 413 5 5 HELIX 26 AC8 TYR B 429 GLY B 435 1 7 HELIX 27 AC9 THR B 457 LYS B 461 1 5 HELIX 28 AD1 CYS B 488 VAL B 496 1 9 HELIX 29 AD2 TYR B 512 GLY B 522 1 11 HELIX 30 AD3 GLY B 539 LEU B 546 1 8 HELIX 31 AD4 THR B 552 ILE B 570 1 19 HELIX 32 AD5 GLY B 577 ALA B 584 1 8 SHEET 1 AA1 4 PHE A 268 TYR A 274 0 SHEET 2 AA1 4 VAL A 242 ALA A 248 1 N VAL A 242 O TYR A 269 SHEET 3 AA1 4 PHE A 307 VAL A 311 1 O ALA A 309 N VAL A 247 SHEET 4 AA1 4 TYR A 345 MET A 349 1 O MET A 349 N LEU A 310 SHEET 1 AA2 2 GLU A 320 LYS A 321 0 SHEET 2 AA2 2 VAL A 328 THR A 329 -1 O THR A 329 N GLU A 320 SHEET 1 AA3 6 ASP A 416 TYR A 420 0 SHEET 2 AA3 6 LYS A 380 ALA A 385 1 N ALA A 385 O TYR A 420 SHEET 3 AA3 6 PHE A 438 THR A 442 1 O ASN A 440 N ILE A 384 SHEET 4 AA3 6 PHE A 470 ASN A 475 1 O ASN A 475 N TYR A 441 SHEET 5 AA3 6 ALA A 501 SER A 507 1 O ILE A 505 N GLY A 474 SHEET 6 AA3 6 TYR A 585 GLY A 589 -1 O LEU A 588 N TYR A 504 SHEET 1 AA4 3 GLY A 445 SER A 446 0 SHEET 2 AA4 3 ALA A 449 TRP A 450 -1 O ALA A 449 N SER A 446 SHEET 3 AA4 3 LEU A 455 THR A 456 -1 O LEU A 455 N TRP A 450 SHEET 1 AA5 7 TYR A 605 THR A 606 0 SHEET 2 AA5 7 SER A 617 ALA A 622 -1 O GLN A 621 N THR A 606 SHEET 3 AA5 7 VAL A 647 MET A 652 -1 O VAL A 650 N TYR A 618 SHEET 4 AA5 7 VAL A 635 VAL A 641 -1 N THR A 639 O SER A 651 SHEET 5 AA5 7 TYR A 627 LYS A 632 -1 N VAL A 628 O GLY A 640 SHEET 6 AA5 7 GLY A 660 THR A 667 -1 O THR A 667 N TYR A 627 SHEET 7 AA5 7 VAL A 674 VAL A 680 -1 O VAL A 680 N GLY A 660 SHEET 1 AA6 4 PHE B 268 TYR B 274 0 SHEET 2 AA6 4 VAL B 242 ALA B 248 1 N VAL B 242 O TYR B 269 SHEET 3 AA6 4 PHE B 307 VAL B 311 1 O ALA B 309 N LEU B 245 SHEET 4 AA6 4 TYR B 345 MET B 349 1 O MET B 349 N LEU B 310 SHEET 1 AA7 2 GLU B 320 LYS B 321 0 SHEET 2 AA7 2 VAL B 328 THR B 329 -1 O THR B 329 N GLU B 320 SHEET 1 AA8 6 ASP B 416 TYR B 420 0 SHEET 2 AA8 6 LYS B 380 ALA B 385 1 N ALA B 385 O TYR B 420 SHEET 3 AA8 6 PHE B 438 THR B 442 1 O ASN B 440 N ILE B 384 SHEET 4 AA8 6 PHE B 470 ASN B 475 1 O ASN B 475 N TYR B 441 SHEET 5 AA8 6 ALA B 501 SER B 507 1 O ILE B 505 N GLY B 474 SHEET 6 AA8 6 TYR B 585 GLY B 589 -1 O LEU B 588 N TYR B 504 SHEET 1 AA9 3 GLY B 445 SER B 446 0 SHEET 2 AA9 3 ALA B 449 TRP B 450 -1 O ALA B 449 N SER B 446 SHEET 3 AA9 3 LEU B 455 THR B 456 -1 O LEU B 455 N TRP B 450 SHEET 1 AB1 7 TYR B 605 THR B 606 0 SHEET 2 AB1 7 SER B 617 ALA B 622 -1 O GLN B 621 N THR B 606 SHEET 3 AB1 7 VAL B 647 MET B 652 -1 O VAL B 650 N TYR B 618 SHEET 4 AB1 7 VAL B 635 VAL B 641 -1 N THR B 639 O SER B 651 SHEET 5 AB1 7 TYR B 627 LYS B 632 -1 N VAL B 628 O GLY B 640 SHEET 6 AB1 7 GLY B 660 THR B 667 -1 O THR B 667 N TYR B 627 SHEET 7 AB1 7 VAL B 674 VAL B 680 -1 O VAL B 680 N GLY B 660 LINK OD1 ASP A 313 CA CA A 706 1555 1555 2.50 LINK OD2 ASP A 313 CA CA A 706 1555 1555 2.52 LINK OD1 ASP A 337 CA CA A 705 1555 1555 2.30 LINK OD1 ASP A 339 CA CA A 705 1555 1555 2.36 LINK O PHE A 341 CA CA A 705 1555 1555 2.30 LINK OE1 GLU A 343 CA CA A 705 1555 1555 2.46 LINK OE2 GLU A 343 CA CA A 705 1555 1555 2.51 LINK OH TYR A 402 NA NA A 704 1555 1555 2.51 LINK O PHE A 482 CA CA A 706 1555 1555 2.36 LINK OE1 GLU A 491 CA CA A 706 1555 1555 2.63 LINK OE2 GLU A 491 CA CA A 706 1555 1555 2.47 LINK O VAL A 521 NA NA A 704 1555 1555 2.34 LINK OG1 THR A 536 NA NA A 704 1555 1555 2.40 LINK O SER A 537 NA NA A 704 1555 1555 2.39 LINK OD2 ASP A 542 NA NA A 704 1555 1555 2.35 LINK O ALA A 543 NA NA A 703 1555 1555 2.67 LINK O THR A 544 NA NA A 703 1555 1555 2.45 LINK O LEU A 546 NA NA A 703 1555 1555 2.30 LINK O SER A 549 NA NA A 703 1555 1555 2.35 LINK O TYR A 550 NA NA A 703 1555 1555 2.53 LINK OD1 ASN A 551 NA NA A 703 1555 1555 2.44 LINK NA NA A 704 O HOH A1150 1555 1555 2.45 LINK CA CA A 705 O HOH A 907 1555 1555 2.39 LINK CA CA A 705 O HOH A 919 1555 1555 2.43 LINK CA CA A 706 O HOH A1063 1555 1555 2.45 LINK CA CA A 706 O HOH A1136 1555 1555 2.43 LINK CA CA A 706 O HOH A1191 1555 1555 2.36 LINK OD1 ASP B 313 CA CA B 706 1555 1555 2.48 LINK OD2 ASP B 313 CA CA B 706 1555 1555 2.53 LINK OD1 ASP B 337 CA CA B 705 1555 1555 2.33 LINK OD1 ASP B 339 CA CA B 705 1555 1555 2.39 LINK O PHE B 341 CA CA B 705 1555 1555 2.30 LINK OE1 GLU B 343 CA CA B 705 1555 1555 2.53 LINK OE2 GLU B 343 CA CA B 705 1555 1555 2.40 LINK OH TYR B 402 NA NA B 704 1555 1555 2.50 LINK O PHE B 482 CA CA B 706 1555 1555 2.37 LINK OE1 GLU B 491 CA CA B 706 1555 1555 2.62 LINK OE2 GLU B 491 CA CA B 706 1555 1555 2.44 LINK O VAL B 521 NA NA B 704 1555 1555 2.34 LINK OG1 THR B 536 NA NA B 704 1555 1555 2.39 LINK O SER B 537 NA NA B 704 1555 1555 2.39 LINK OD2 ASP B 542 NA NA B 704 1555 1555 2.32 LINK O ALA B 543 NA NA B 703 1555 1555 2.66 LINK O THR B 544 NA NA B 703 1555 1555 2.45 LINK O LEU B 546 NA NA B 703 1555 1555 2.30 LINK O SER B 549 NA NA B 703 1555 1555 2.39 LINK O TYR B 550 NA NA B 703 1555 1555 2.53 LINK OD1 ASN B 551 NA NA B 703 1555 1555 2.43 LINK NA NA B 704 O HOH B1077 1555 1555 2.45 LINK CA CA B 705 O HOH B 881 1555 1555 2.44 LINK CA CA B 705 O HOH B 913 1555 1555 2.39 LINK CA CA B 706 O HOH B1043 1555 1555 2.46 LINK CA CA B 706 O HOH B1137 1555 1555 2.42 LINK CA CA B 706 O HOH B1191 1555 1555 2.39 CISPEP 1 THR A 240 PRO A 241 0 -14.54 CISPEP 2 ALA A 423 PRO A 424 0 5.38 CISPEP 3 ASP A 452 PRO A 453 0 7.79 CISPEP 4 THR B 240 PRO B 241 0 -9.48 CISPEP 5 ALA B 423 PRO B 424 0 7.17 CISPEP 6 ASP B 452 PRO B 453 0 5.83 SITE 1 AC1 6 ALA A 543 THR A 544 LEU A 546 SER A 549 SITE 2 AC1 6 TYR A 550 ASN A 551 SITE 1 AC2 6 TYR A 402 VAL A 521 THR A 536 SER A 537 SITE 2 AC2 6 ASP A 542 HOH A1150 SITE 1 AC3 6 ASP A 337 ASP A 339 PHE A 341 GLU A 343 SITE 2 AC3 6 HOH A 907 HOH A 919 SITE 1 AC4 6 ASP A 313 PHE A 482 GLU A 491 HOH A1063 SITE 2 AC4 6 HOH A1136 HOH A1191 SITE 1 AC5 26 TRP A 391 THR A 442 ALA A 443 HIS A 444 SITE 2 AC5 26 GLY A 445 ALA A 451 ASN A 475 CYS A 477 SITE 3 AC5 26 ILE A 478 ASN A 510 SER A 511 TYR A 512 SITE 4 AC5 26 TRP A 513 ASP A 516 HIS A 575 HOH A 872 SITE 5 AC5 26 HOH A 897 HOH A1106 HOH A1168 HOH A1479 SITE 6 AC5 26 TYR B 389 SER B 390 TRP B 391 GLN B 394 SITE 7 AC5 26 HOH B1181 HOH B1432 SITE 1 AC6 19 ARG A 243 LYS A 253 LEU A 260 TYR A 269 SITE 2 AC6 19 LEU A 270 VAL A 272 TYR A 274 GLY A 634 SITE 3 AC6 19 VAL A 635 LEU A 636 LYS A 654 HOH A 803 SITE 4 AC6 19 HOH A 818 HOH A 974 HOH A 976 HOH A1123 SITE 5 AC6 19 HOH A1188 HOH A1232 HOH A1314 SITE 1 AC7 10 THR A 282 GLN A 615 SER A 617 TYR A 618 SITE 2 AC7 10 HOH A 860 HOH A 903 HOH A 917 HOH A 943 SITE 3 AC7 10 HOH A1046 HOH A1283 SITE 1 AC8 9 TYR A 238 ASP A 548 SER A 549 ASN A 551 SITE 2 AC8 9 MET A 594 SER A 669 HOH A 889 HOH A 915 SITE 3 AC8 9 HOH A1086 SITE 1 AC9 9 TYR A 429 SER A 430 ASN A 433 GLN A 459 SITE 2 AC9 9 ALA A 462 LEU A 463 HOH A 876 HOH A 954 SITE 3 AC9 9 HOH A1259 SITE 1 AD1 6 ALA B 543 THR B 544 LEU B 546 SER B 549 SITE 2 AD1 6 TYR B 550 ASN B 551 SITE 1 AD2 6 TYR B 402 VAL B 521 THR B 536 SER B 537 SITE 2 AD2 6 ASP B 542 HOH B1077 SITE 1 AD3 6 ASP B 337 ASP B 339 PHE B 341 GLU B 343 SITE 2 AD3 6 HOH B 881 HOH B 913 SITE 1 AD4 6 ASP B 313 PHE B 482 GLU B 491 HOH B1043 SITE 2 AD4 6 HOH B1137 HOH B1191 SITE 1 AD5 24 TYR A 389 SER A 390 TRP A 391 GLN A 394 SITE 2 AD5 24 HOH A1179 TRP B 391 THR B 442 ALA B 443 SITE 3 AD5 24 HIS B 444 GLY B 445 ALA B 451 ASN B 475 SITE 4 AD5 24 CYS B 477 ILE B 478 ASN B 510 SER B 511 SITE 5 AD5 24 TYR B 512 TRP B 513 ASP B 516 HIS B 575 SITE 6 AD5 24 HOH B 876 HOH B 896 HOH B1100 HOH B1237 SITE 1 AD6 18 ARG B 243 LEU B 260 TYR B 269 LEU B 270 SITE 2 AD6 18 VAL B 272 TYR B 274 VAL B 635 LEU B 636 SITE 3 AD6 18 HOH B 842 HOH B 955 HOH B 959 HOH B 964 SITE 4 AD6 18 HOH B 988 HOH B1036 HOH B1126 HOH B1201 SITE 5 AD6 18 HOH B1351 HOH B1520 SITE 1 AD7 10 TYR B 425 THR B 426 GLY B 427 CYS B 428 SITE 2 AD7 10 TYR B 429 PRO B 453 LEU B 454 HOH B 960 SITE 3 AD7 10 HOH B1046 HOH B1345 SITE 1 AD8 10 TYR B 238 ASP B 548 SER B 549 ASN B 551 SITE 2 AD8 10 MET B 594 SER B 669 HOH B 971 HOH B1016 SITE 3 AD8 10 HOH B1026 HOH B1190 SITE 1 AD9 10 ASN B 524 VAL B 526 VAL B 529 PRO B 531 SITE 2 AD9 10 THR B 532 GLY B 535 THR B 536 HOH B 868 SITE 3 AD9 10 HOH B1053 HOH B1121 SITE 1 AE1 8 TYR B 429 SER B 430 ASN B 433 GLN B 459 SITE 2 AE1 8 HOH B 807 HOH B 960 HOH B1022 HOH B1058 CRYST1 86.670 87.050 129.210 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011538 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011488 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007739 0.00000