HEADER TRANSFERASE 26-NOV-18 6IAD TITLE APO CRYSTAL STRUCTURE OF ARCHAEAL METHANOCALDOCOCCUS INFERNUS ELP3 TITLE 2 (DEL1-54) COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE ACETYLTRANSFERASE, ELP3 FAMILY; COMPND 3 CHAIN: A; COMPND 4 EC: 2.3.1.48; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOCALDOCOCCUS INFERNUS (STRAIN DSM 11812 / SOURCE 3 JCM 15783 / ME); SOURCE 4 ORGANISM_TAXID: 573063; SOURCE 5 STRAIN: DSM 11812 / JCM 15783 / ME; SOURCE 6 GENE: METIN_0452; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS TRNA BINDING, ELONGATOR COMPLEX, NON-CANONICAL ACETYLTRANSFERASE, KEYWDS 2 ACETYL-COA HYDROLYSIS, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR T.Y.LIN,S.GLATT REVDAT 2 24-JAN-24 6IAD 1 REMARK REVDAT 1 20-FEB-19 6IAD 0 JRNL AUTH T.Y.LIN,N.E.H.ABBASSI,K.ZAKRZEWSKI,A.CHRAMIEC-GLABIK, JRNL AUTH 2 M.JEMIOLA-RZEMINSKA,J.ROZYCKI,S.GLATT JRNL TITL THE ELONGATOR SUBUNIT ELP3 IS A NON-CANONICAL TRNA JRNL TITL 2 ACETYLTRANSFERASE. JRNL REF NAT COMMUN V. 10 625 2019 JRNL REFN ESSN 2041-1723 JRNL PMID 30733442 JRNL DOI 10.1038/S41467-019-08579-2 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.43 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 32466 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1624 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.4300 - 4.6876 0.99 2807 148 0.2000 0.2330 REMARK 3 2 4.6876 - 3.7231 1.00 2628 138 0.1576 0.1839 REMARK 3 3 3.7231 - 3.2531 1.00 2625 138 0.1833 0.2034 REMARK 3 4 3.2531 - 2.9560 1.00 2578 136 0.2090 0.2251 REMARK 3 5 2.9560 - 2.7443 1.00 2546 134 0.2045 0.2461 REMARK 3 6 2.7443 - 2.5826 1.00 2569 135 0.2008 0.2245 REMARK 3 7 2.5826 - 2.4533 1.00 2538 134 0.2058 0.2140 REMARK 3 8 2.4533 - 2.3466 1.00 2496 131 0.2204 0.2489 REMARK 3 9 2.3466 - 2.2563 1.00 2541 134 0.2170 0.2215 REMARK 3 10 2.2563 - 2.1784 1.00 2515 132 0.2466 0.3076 REMARK 3 11 2.1784 - 2.1103 1.00 2516 133 0.2552 0.2927 REMARK 3 12 2.1103 - 2.0500 0.99 2483 131 0.2969 0.3151 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.740 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 3579 REMARK 3 ANGLE : 0.665 4805 REMARK 3 CHIRALITY : 0.045 515 REMARK 3 PLANARITY : 0.003 604 REMARK 3 DIHEDRAL : 16.882 2204 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 72 THROUGH 231 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.1147 -7.8308 -11.6140 REMARK 3 T TENSOR REMARK 3 T11: 0.3988 T22: 0.3462 REMARK 3 T33: 0.3364 T12: 0.0244 REMARK 3 T13: 0.0312 T23: 0.0592 REMARK 3 L TENSOR REMARK 3 L11: 4.6551 L22: 2.4744 REMARK 3 L33: 2.8553 L12: 1.1243 REMARK 3 L13: 0.1818 L23: 0.0007 REMARK 3 S TENSOR REMARK 3 S11: 0.1057 S12: -0.3386 S13: -0.1080 REMARK 3 S21: 0.2666 S22: -0.1216 S23: 0.0950 REMARK 3 S31: 0.0262 S32: -0.2409 S33: 0.0377 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 232 THROUGH 368 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.4219 15.7330 -9.1090 REMARK 3 T TENSOR REMARK 3 T11: 0.3392 T22: 0.4264 REMARK 3 T33: 0.3579 T12: -0.0471 REMARK 3 T13: 0.0092 T23: -0.0096 REMARK 3 L TENSOR REMARK 3 L11: 1.2197 L22: 2.8109 REMARK 3 L33: 4.1888 L12: -0.2491 REMARK 3 L13: -0.2613 L23: 2.1238 REMARK 3 S TENSOR REMARK 3 S11: 0.0216 S12: -0.2637 S13: 0.1219 REMARK 3 S21: 0.3684 S22: -0.2156 S23: 0.1711 REMARK 3 S31: 0.0161 S32: -0.3608 S33: 0.1254 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 369 THROUGH 404 ) REMARK 3 ORIGIN FOR THE GROUP (A): -31.7543 18.7796 -26.5644 REMARK 3 T TENSOR REMARK 3 T11: 0.3586 T22: 0.4547 REMARK 3 T33: 0.4289 T12: 0.0568 REMARK 3 T13: -0.0257 T23: 0.0126 REMARK 3 L TENSOR REMARK 3 L11: 1.3517 L22: 2.3900 REMARK 3 L33: 3.5157 L12: 1.7172 REMARK 3 L13: 1.9190 L23: 2.8450 REMARK 3 S TENSOR REMARK 3 S11: -0.0566 S12: -0.2494 S13: 0.2075 REMARK 3 S21: 0.2445 S22: -0.0247 S23: 0.0395 REMARK 3 S31: 0.0677 S32: -0.0508 S33: 0.0469 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 405 THROUGH 534 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.4828 -0.8769 -32.2475 REMARK 3 T TENSOR REMARK 3 T11: 0.3508 T22: 0.3561 REMARK 3 T33: 0.3701 T12: 0.0047 REMARK 3 T13: 0.0278 T23: -0.0334 REMARK 3 L TENSOR REMARK 3 L11: 1.7239 L22: 1.7298 REMARK 3 L33: 1.5823 L12: 0.0309 REMARK 3 L13: -0.1798 L23: -0.2032 REMARK 3 S TENSOR REMARK 3 S11: -0.0500 S12: 0.1056 S13: -0.2726 REMARK 3 S21: -0.0797 S22: 0.0343 S23: 0.0349 REMARK 3 S31: 0.1585 S32: -0.0703 S33: 0.0019 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6IAD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 26-NOV-18. REMARK 100 THE DEPOSITION ID IS D_1200013092. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-AUG-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32466 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 12.70 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.0800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 5L7L REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M PHOSPHATE/CITRATE (PH 3.8), 0.2 REMARK 280 M LISO4 AND 12% PEG1000, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 124.12500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 31.48500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 31.48500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 62.06250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 31.48500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 31.48500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 186.18750 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 31.48500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 31.48500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 62.06250 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 31.48500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 31.48500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 186.18750 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 124.12500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19130 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -61.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 52 REMARK 465 ALA A 53 REMARK 465 MET A 54 REMARK 465 ALA A 55 REMARK 465 THR A 56 REMARK 465 GLU A 57 REMARK 465 GLU A 58 REMARK 465 GLU A 59 REMARK 465 LYS A 60 REMARK 465 LYS A 61 REMARK 465 ILE A 62 REMARK 465 LEU A 63 REMARK 465 ILE A 64 REMARK 465 PRO A 65 REMARK 465 ILE A 66 REMARK 465 LEU A 67 REMARK 465 ARG A 68 REMARK 465 LYS A 69 REMARK 465 LYS A 70 REMARK 465 PRO A 71 REMARK 465 ALA A 88 REMARK 465 LYS A 89 REMARK 465 CYS A 90 REMARK 465 PRO A 91 REMARK 465 HIS A 92 REMARK 465 GLY A 93 REMARK 465 LYS A 94 REMARK 465 CYS A 95 REMARK 465 ILE A 96 REMARK 465 PHE A 97 REMARK 465 CYS A 98 REMARK 465 PRO A 99 REMARK 465 GLY A 100 REMARK 465 GLY A 101 REMARK 465 LEU A 102 REMARK 465 ASP A 103 REMARK 465 SER A 104 REMARK 465 VAL A 105 REMARK 465 PHE A 106 REMARK 465 GLY A 107 REMARK 465 ASP A 108 REMARK 465 VAL A 109 REMARK 465 PRO A 110 REMARK 465 GLN A 111 REMARK 465 SER A 112 REMARK 465 TYR A 113 REMARK 465 THR A 114 REMARK 465 GLY A 115 REMARK 465 ARG A 116 REMARK 465 GLU A 117 REMARK 465 PRO A 118 REMARK 465 ALA A 119 REMARK 465 THR A 120 REMARK 465 MET A 121 REMARK 465 ARG A 122 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 125 CB CG SD CE REMARK 470 LYS A 143 CD CE NZ REMARK 470 LYS A 185 CG CD CE NZ REMARK 470 LYS A 192 CG CD CE NZ REMARK 470 LYS A 198 CD CE NZ REMARK 470 LYS A 216 CG CD CE NZ REMARK 470 LYS A 242 CD CE NZ REMARK 470 GLU A 310 CG CD OE1 OE2 REMARK 470 LYS A 319 CD CE NZ REMARK 470 LYS A 324 CG CD CE NZ REMARK 470 GLU A 329 CG CD OE1 OE2 REMARK 470 ARG A 350 NE CZ NH1 NH2 REMARK 470 ARG A 353 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 365 CE NZ REMARK 470 ARG A 383 NE CZ NH1 NH2 REMARK 470 LYS A 399 CD CE NZ REMARK 470 LYS A 455 CD CE NZ REMARK 470 GLU A 468 CD OE1 OE2 REMARK 470 GLU A 477 CB CG CD OE1 OE2 REMARK 470 LYS A 491 CD CE NZ REMARK 470 LYS A 524 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH21 ARG A 137 O HOH A 701 1.25 REMARK 500 OD2 ASP A 299 HH22 ARG A 460 1.43 REMARK 500 O HOH A 802 O HOH A 805 2.03 REMARK 500 NH2 ARG A 137 O HOH A 701 2.04 REMARK 500 O4 SO4 A 604 O HOH A 702 2.11 REMARK 500 NH1 ARG A 137 OE1 GLN A 140 2.13 REMARK 500 O HOH A 791 O HOH A 799 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 212 43.74 -103.05 REMARK 500 GLN A 234 -62.28 70.49 REMARK 500 PHE A 296 -98.39 -109.96 REMARK 500 TYR A 445 -69.28 -104.96 REMARK 500 GLU A 468 118.29 -166.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 604 DBREF 6IAD A 55 534 UNP D5VRB9 D5VRB9_METIM 55 534 SEQADV 6IAD GLY A 52 UNP D5VRB9 EXPRESSION TAG SEQADV 6IAD ALA A 53 UNP D5VRB9 EXPRESSION TAG SEQADV 6IAD MET A 54 UNP D5VRB9 EXPRESSION TAG SEQRES 1 A 483 GLY ALA MET ALA THR GLU GLU GLU LYS LYS ILE LEU ILE SEQRES 2 A 483 PRO ILE LEU ARG LYS LYS PRO VAL ARG THR ILE SER GLY SEQRES 3 A 483 VAL ALA VAL VAL ALA VAL MET THR SER PRO ALA LYS CYS SEQRES 4 A 483 PRO HIS GLY LYS CYS ILE PHE CYS PRO GLY GLY LEU ASP SEQRES 5 A 483 SER VAL PHE GLY ASP VAL PRO GLN SER TYR THR GLY ARG SEQRES 6 A 483 GLU PRO ALA THR MET ARG GLY LEU MET PHE ASN PHE ASP SEQRES 7 A 483 PRO TYR LEU GLN THR ARG ALA ARG ILE GLU GLN LEU GLU SEQRES 8 A 483 LYS VAL GLY HIS PRO THR ASP LYS ILE GLU LEU ILE ILE SEQRES 9 A 483 MET GLY GLY THR PHE PRO ALA ARG GLU ILE GLU TYR GLN SEQRES 10 A 483 ASP TRP PHE ILE LYS ARG CYS LEU ASP ALA MET ASN GLU SEQRES 11 A 483 ARG GLU SER LYS SER LEU GLU GLU ALA GLN LYS ILE ASN SEQRES 12 A 483 GLU THR ALA LYS HIS ARG CYS VAL ALA LEU CYS ILE GLU SEQRES 13 A 483 THR ARG PRO ASP TYR CYS SER GLU LYS GLU ILE ASN GLN SEQRES 14 A 483 MET LEU LYS LEU GLY ALA THR ARG VAL GLU LEU GLY VAL SEQRES 15 A 483 GLN SER ILE TYR ASN GLU ILE LEU LYS LEU CYS LYS ARG SEQRES 16 A 483 GLY HIS SER VAL GLU ASP THR ILE LYS ALA THR GLN LEU SEQRES 17 A 483 LEU LYS ASP SER GLY LEU LYS VAL SER TYR HIS LEU MET SEQRES 18 A 483 PRO GLY MET PRO GLY SER SER ILE GLU MET ASP LYS LYS SEQRES 19 A 483 MET PHE LYS GLU ILE PHE THR ASN PRO ASP PHE MET PRO SEQRES 20 A 483 ASP MET VAL LYS ILE TYR PRO CYS LEU VAL ILE GLU GLY SEQRES 21 A 483 THR GLU LEU TYR GLU MET TRP LYS ARG GLY GLU PHE LYS SEQRES 22 A 483 PRO TYR ARG GLU GLU GLU ALA ILE GLU VAL ILE SER TYR SEQRES 23 A 483 ALA LYS SER ILE MET PRO LYS TRP VAL ARG THR SER ARG SEQRES 24 A 483 ILE GLN ARG ASP ILE PRO ALA THR VAL ILE VAL ASP GLY SEQRES 25 A 483 VAL LYS LYS SER ASN LEU GLY GLU LEU VAL TYR LYS TYR SEQRES 26 A 483 MET GLU LYS LYS GLY LEU ARG CYS ARG CYS ILE ARG CYS SEQRES 27 A 483 ARG GLU VAL GLY HIS VAL TYR TYR LYS LYS GLY ILE LEU SEQRES 28 A 483 PRO ASP PRO GLU HIS ILE LYS LEU VAL ARG GLU ASP TYR SEQRES 29 A 483 GLU ALA SER GLY GLY THR GLU ILE PHE LEU SER PHE GLU SEQRES 30 A 483 ASP VAL LYS ASN ASP ILE LEU ILE ALA PHE LEU ARG LEU SEQRES 31 A 483 ARG ASP PRO TYR LYS PRO PHE ARG LYS GLU ILE ASP ASP SEQRES 32 A 483 LYS THR MET LEU VAL ARG GLN LEU HIS VAL PHE GLY TRP SEQRES 33 A 483 GLU LYS ALA LEU THR ARG ASP ILE LYS GLU VAL SER TRP SEQRES 34 A 483 GLN HIS MET GLY TYR GLY ARG MET LEU MET LYS GLU ALA SEQRES 35 A 483 GLU ARG ILE ALA LYS GLU GLU PHE GLY LYS LYS LYS ILE SEQRES 36 A 483 LEU VAL THR SER GLY ILE GLY VAL ARG GLU TYR TYR ARG SEQRES 37 A 483 LYS LEU GLY TYR LYS ARG VAL GLY ALA TYR MET GLY LYS SEQRES 38 A 483 GLU LEU HET SO4 A 601 5 HET SO4 A 602 5 HET SO4 A 603 5 HET SO4 A 604 5 HETNAM SO4 SULFATE ION FORMUL 2 SO4 4(O4 S 2-) FORMUL 6 HOH *109(H2 O) HELIX 1 AA1 ASP A 129 VAL A 144 1 16 HELIX 2 AA2 THR A 159 ARG A 163 5 5 HELIX 3 AA3 GLU A 164 GLU A 181 1 18 HELIX 4 AA4 SER A 186 GLU A 195 1 10 HELIX 5 AA5 SER A 214 GLY A 225 1 12 HELIX 6 AA6 TYR A 237 CYS A 244 1 8 HELIX 7 AA7 SER A 249 ASP A 262 1 14 HELIX 8 AA8 SER A 279 ASN A 293 1 15 HELIX 9 AA9 THR A 312 ARG A 320 1 9 HELIX 10 AB1 ARG A 327 MET A 342 1 16 HELIX 11 AB2 PRO A 356 THR A 358 5 3 HELIX 12 AB3 ASN A 368 GLY A 381 1 14 HELIX 13 AB4 CYS A 386 GLU A 391 1 6 HELIX 14 AB5 GLU A 391 GLY A 400 1 10 HELIX 15 AB6 ASP A 404 GLU A 406 5 3 HELIX 16 AB7 GLY A 484 GLU A 500 1 17 HELIX 17 AB8 GLY A 511 GLY A 513 5 3 HELIX 18 AB9 VAL A 514 LEU A 521 1 8 SHEET 1 AA1 3 THR A 74 SER A 76 0 SHEET 2 AA1 3 GLU A 468 ALA A 470 -1 O LYS A 469 N ILE A 75 SHEET 3 AA1 3 GLU A 477 VAL A 478 -1 O VAL A 478 N GLU A 468 SHEET 1 AA2 7 ALA A 79 MET A 84 0 SHEET 2 AA2 7 LYS A 150 MET A 156 1 O LYS A 150 N ALA A 79 SHEET 3 AA2 7 ARG A 200 THR A 208 1 O ARG A 200 N ILE A 151 SHEET 4 AA2 7 ARG A 228 GLN A 234 1 O GLU A 230 N THR A 208 SHEET 5 AA2 7 LYS A 266 LEU A 271 1 O HIS A 270 N GLN A 234 SHEET 6 AA2 7 MET A 300 ILE A 303 1 O LYS A 302 N LEU A 271 SHEET 7 AA2 7 ARG A 347 THR A 348 1 O ARG A 347 N VAL A 301 SHEET 1 AA3 2 VAL A 308 ILE A 309 0 SHEET 2 AA3 2 ILE A 360 ASP A 362 -1 O ASP A 362 N VAL A 308 SHEET 1 AA4 7 ILE A 408 ALA A 417 0 SHEET 2 AA4 7 GLY A 420 ASP A 429 -1 O SER A 426 N VAL A 411 SHEET 3 AA4 7 ILE A 434 ASP A 443 -1 O LEU A 441 N ILE A 423 SHEET 4 AA4 7 THR A 456 VAL A 464 -1 O LEU A 458 N ARG A 442 SHEET 5 AA4 7 LYS A 505 VAL A 508 1 O LEU A 507 N VAL A 459 SHEET 6 AA4 7 TYR A 529 GLU A 533 -1 O MET A 530 N VAL A 508 SHEET 7 AA4 7 LYS A 524 VAL A 526 -1 N LYS A 524 O GLY A 531 SSBOND 1 CYS A 384 CYS A 389 1555 1555 2.04 SITE 1 AC1 4 ARG A 209 ARG A 246 GLY A 247 HIS A 248 SITE 1 AC2 8 HIS A 482 MET A 483 GLY A 484 TYR A 485 SITE 2 AC2 8 GLY A 486 ARG A 487 TYR A 517 HOH A 709 SITE 1 AC3 4 TRP A 170 LYS A 173 ARG A 174 GLU A 183 SITE 1 AC4 4 ARG A 519 LYS A 524 ARG A 525 HOH A 702 CRYST1 62.970 62.970 248.250 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015881 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015881 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004028 0.00000