HEADER OXIDOREDUCTASE 27-NOV-18 6IAU TITLE AMINE DEHYDROGENASE FROM CYSTOBACTER FUSCUS IN COMPLEX WITH NADP+ AND TITLE 2 CYCLOHEXYLAMINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMINE DEHYDROGENASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CYSTOBACTER FUSCUS DSM 2262; SOURCE 3 ORGANISM_TAXID: 1242864; SOURCE 4 GENE: D187_009359; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) KEYWDS AMINE, OXIDOREDUCTASE, NADP, DEHYDROGENASE EXPDTA X-RAY DIFFRACTION AUTHOR L.BELOTI,O.MAYOL,J.P.TURKENBURG,C.VAXELAIRE-VERGNE,G.GROGAN REVDAT 2 24-JAN-24 6IAU 1 REMARK REVDAT 1 27-MAR-19 6IAU 0 JRNL AUTH O.MAYOL,K.BASTARD,L.BELOTI,A.FRESE,J.P.TURKENBURG, JRNL AUTH 2 J.-L.PETIT,A.MARIAGE,A.DEBARD,V.PELLOUIN,A.PERRET, JRNL AUTH 3 V.DE BERARDINIS,A.ZAPARUCHA,G.GROGAN,C.VAXELAIRE-VERGNE JRNL TITL A FAMILY OF NATIVE AMINE DEHYDROGENASES FOR THE ASYMMETRIC JRNL TITL 2 REDUCTIVE AMINATION OF KETONES JRNL REF NAT CATAL 2019 JRNL REFN ESSN 2520-1158 JRNL DOI 10.1038/S41929-019-0249-Z REMARK 2 REMARK 2 RESOLUTION. 1.97 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0232 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.97 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 55.24 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 43558 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2265 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.97 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.02 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3153 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.94 REMARK 3 BIN R VALUE (WORKING SET) : 0.2590 REMARK 3 BIN FREE R VALUE SET COUNT : 157 REMARK 3 BIN FREE R VALUE : 0.2810 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5055 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 55 REMARK 3 SOLVENT ATOMS : 260 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.74 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.76000 REMARK 3 B22 (A**2) : 4.12000 REMARK 3 B33 (A**2) : -2.36000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.188 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.153 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.124 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.590 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5218 ; 0.010 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 4767 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7144 ; 1.684 ; 1.658 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10979 ; 1.452 ; 1.574 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 678 ; 7.168 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 251 ;38.305 ;21.155 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 757 ;15.150 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 41 ;17.105 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 726 ; 0.090 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5939 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1101 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2718 ; 2.213 ; 2.707 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2717 ; 2.212 ; 2.706 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3394 ; 3.207 ; 4.050 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3395 ; 3.207 ; 4.051 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2500 ; 2.712 ; 2.907 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2501 ; 2.712 ; 2.907 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3751 ; 3.981 ; 4.268 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5763 ; 5.365 ;32.362 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 5708 ; 5.334 ;32.226 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 3 340 B 3 340 10390 0.08 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6IAU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-NOV-18. REMARK 100 THE DEPOSITION ID IS D_1200013121. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-SEP-18 REMARK 200 TEMPERATURE (KELVIN) : 120 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97950 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45901 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.970 REMARK 200 RESOLUTION RANGE LOW (A) : 55.240 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.700 REMARK 200 R MERGE (I) : 0.13000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.97 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.75000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 6GET REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.0 M AMMONIUM SULFATE, 0.1 M TRIS-HCL REMARK 280 PH 8.5; 10 MM NADP+; 20 MM CYCLOHEXYLAMINE, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.50000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 71.50000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.50000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 71.50000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.50000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.50000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24380 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A -3 REMARK 465 PRO A -2 REMARK 465 ARG A -1 REMARK 465 GLY A 0 REMARK 465 SER A 1 REMARK 465 SER A 2 REMARK 465 VAL B -3 REMARK 465 PRO B -2 REMARK 465 ARG B -1 REMARK 465 GLY B 0 REMARK 465 SER B 1 REMARK 465 ALA B 342 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 3 CG CD CE NZ REMARK 470 GLU A 48 CG CD OE1 OE2 REMARK 470 ARG A 59 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 74 CD NE CZ NH1 NH2 REMARK 470 GLN A 179 CD OE1 NE2 REMARK 470 GLU A 188 CD OE1 OE2 REMARK 470 ARG A 193 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 217 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 297 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 337 CD NE CZ NH1 NH2 REMARK 470 GLU A 341 CG CD OE1 OE2 REMARK 470 LYS B 3 CG CD CE NZ REMARK 470 ARG B 42 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 48 CG CD OE1 OE2 REMARK 470 ARG B 59 NE CZ NH1 NH2 REMARK 470 GLU B 72 CD OE1 OE2 REMARK 470 GLU B 123 CD OE1 OE2 REMARK 470 GLN B 179 CG CD OE1 NE2 REMARK 470 GLU B 188 CD OE1 OE2 REMARK 470 ARG B 217 NE CZ NH1 NH2 REMARK 470 ARG B 235 CG CD NE CZ NH1 NH2 REMARK 470 SER B 238 OG REMARK 470 LEU B 239 CG CD1 CD2 REMARK 470 ARG B 241 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 242 CG CD OE1 OE2 REMARK 470 ARG B 297 NE CZ NH1 NH2 REMARK 470 ARG B 337 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 341 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER A 197 O HOH A 401 2.02 REMARK 500 NH1 ARG B 41 O3B NAP B 401 2.07 REMARK 500 OG SER A 199 O HOH A 401 2.11 REMARK 500 OD1 ASP B 64 O HOH B 501 2.15 REMARK 500 O HOH B 506 O HOH B 537 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 158 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 43 -14.38 85.56 REMARK 500 THR A 82 -75.09 -133.19 REMARK 500 TYR A 112 82.86 -159.00 REMARK 500 ILE A 194 -68.11 -96.96 REMARK 500 ASP B 43 -10.84 88.61 REMARK 500 THR B 82 -74.87 -132.69 REMARK 500 TYR B 112 82.30 -159.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAP B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HAI B 402 DBREF 6IAU A 2 342 UNP S9Q235 S9Q235_9DELT 2 342 DBREF 6IAU B 2 342 UNP S9Q235 S9Q235_9DELT 2 342 SEQADV 6IAU VAL A -3 UNP S9Q235 EXPRESSION TAG SEQADV 6IAU PRO A -2 UNP S9Q235 EXPRESSION TAG SEQADV 6IAU ARG A -1 UNP S9Q235 EXPRESSION TAG SEQADV 6IAU GLY A 0 UNP S9Q235 EXPRESSION TAG SEQADV 6IAU SER A 1 UNP S9Q235 EXPRESSION TAG SEQADV 6IAU VAL B -3 UNP S9Q235 EXPRESSION TAG SEQADV 6IAU PRO B -2 UNP S9Q235 EXPRESSION TAG SEQADV 6IAU ARG B -1 UNP S9Q235 EXPRESSION TAG SEQADV 6IAU GLY B 0 UNP S9Q235 EXPRESSION TAG SEQADV 6IAU SER B 1 UNP S9Q235 EXPRESSION TAG SEQRES 1 A 346 VAL PRO ARG GLY SER SER LYS ARG PRO ILE ARG ILE ILE SEQRES 2 A 346 GLN TRP GLY CYS GLY LEU MET GLY GLN THR LEU ILE ARG SEQRES 3 A 346 THR LEU ARG GLU LYS GLY ALA GLU LEU VAL GLY ALA ILE SEQRES 4 A 346 ASP HIS ASN ALA ALA ARG ARG ASP ARG ASP ALA GLY GLU SEQRES 5 A 346 VAL ALA GLY LEU GLY GLN SER LEU GLY VAL ARG ILE HIS SEQRES 6 A 346 PRO PRO ASP GLN ALA ASP ALA VAL PHE ARG GLU ALA ARG SEQRES 7 A 346 ALA ASP VAL CYS ILE LEU CYS THR ARG SER ILE MET SER SEQRES 8 A 346 GLU LEU ALA GLY ALA LEU ARG VAL ALA ALA ARG HIS GLY SEQRES 9 A 346 VAL ASN ALA ILE THR ILE GLY GLU GLU ALA PHE TYR PRO SEQRES 10 A 346 TRP THR THR SER GLN ALA LEU THR GLU GLU LEU ASP GLN SEQRES 11 A 346 LEU ALA ARG ALA ASN ASP CYS THR LEU THR GLY SER GLY SEQRES 12 A 346 PHE GLN ASP VAL PHE TRP GLY ASN LEU ILE THR VAL LEU SEQRES 13 A 346 ALA GLY ALA THR HIS ARG ILE ASP ARG ILE VAL GLY LEU SEQRES 14 A 346 THR GLN TYR ASN ALA ASP ASP TYR GLY SER ALA LEU ALA SEQRES 15 A 346 GLN LYS HIS GLY VAL GLY LEU ASP PRO GLU THR PHE ALA SEQRES 16 A 346 ALA ARG ILE GLY ALA SER ASN SER PRO SER TYR VAL TRP SEQRES 17 A 346 ASN SER ASN GLU TRP LEU CYS ALA GLN LEU GLY TRP ARG SEQRES 18 A 346 VAL ARG ASP ILE ARG GLN GLN LEU LEU PRO THR THR HIS SEQRES 19 A 346 THR GLY THR LEU ARG SER ALA SER LEU GLY ARG GLU VAL SEQRES 20 A 346 PRO ALA GLY HIS ALA THR GLY MET LYS ALA VAL VAL VAL SEQRES 21 A 346 THR GLU THR HIS GLU GLY PRO VAL ILE GLU THR HIS CYS SEQRES 22 A 346 VAL GLY LYS LEU TYR ALA PRO GLY GLU VAL ASP LEU ASN SEQRES 23 A 346 GLU TRP THR LEU ARG GLY GLU PRO ASP THR THR VAL THR SEQRES 24 A 346 ILE ARG GLN PRO ALA THR PRO ALA LEU THR CYS ALA THR SEQRES 25 A 346 VAL LEU ASN ARG LEU PRO GLN LEU LEU ALA ALA PRO PRO SEQRES 26 A 346 GLY PHE VAL THR THR ASP ARG PHE THR PRO ALA THR TYR SEQRES 27 A 346 VAL SER ARG LEU GLU THR GLU ALA SEQRES 1 B 346 VAL PRO ARG GLY SER SER LYS ARG PRO ILE ARG ILE ILE SEQRES 2 B 346 GLN TRP GLY CYS GLY LEU MET GLY GLN THR LEU ILE ARG SEQRES 3 B 346 THR LEU ARG GLU LYS GLY ALA GLU LEU VAL GLY ALA ILE SEQRES 4 B 346 ASP HIS ASN ALA ALA ARG ARG ASP ARG ASP ALA GLY GLU SEQRES 5 B 346 VAL ALA GLY LEU GLY GLN SER LEU GLY VAL ARG ILE HIS SEQRES 6 B 346 PRO PRO ASP GLN ALA ASP ALA VAL PHE ARG GLU ALA ARG SEQRES 7 B 346 ALA ASP VAL CYS ILE LEU CYS THR ARG SER ILE MET SER SEQRES 8 B 346 GLU LEU ALA GLY ALA LEU ARG VAL ALA ALA ARG HIS GLY SEQRES 9 B 346 VAL ASN ALA ILE THR ILE GLY GLU GLU ALA PHE TYR PRO SEQRES 10 B 346 TRP THR THR SER GLN ALA LEU THR GLU GLU LEU ASP GLN SEQRES 11 B 346 LEU ALA ARG ALA ASN ASP CYS THR LEU THR GLY SER GLY SEQRES 12 B 346 PHE GLN ASP VAL PHE TRP GLY ASN LEU ILE THR VAL LEU SEQRES 13 B 346 ALA GLY ALA THR HIS ARG ILE ASP ARG ILE VAL GLY LEU SEQRES 14 B 346 THR GLN TYR ASN ALA ASP ASP TYR GLY SER ALA LEU ALA SEQRES 15 B 346 GLN LYS HIS GLY VAL GLY LEU ASP PRO GLU THR PHE ALA SEQRES 16 B 346 ALA ARG ILE GLY ALA SER ASN SER PRO SER TYR VAL TRP SEQRES 17 B 346 ASN SER ASN GLU TRP LEU CYS ALA GLN LEU GLY TRP ARG SEQRES 18 B 346 VAL ARG ASP ILE ARG GLN GLN LEU LEU PRO THR THR HIS SEQRES 19 B 346 THR GLY THR LEU ARG SER ALA SER LEU GLY ARG GLU VAL SEQRES 20 B 346 PRO ALA GLY HIS ALA THR GLY MET LYS ALA VAL VAL VAL SEQRES 21 B 346 THR GLU THR HIS GLU GLY PRO VAL ILE GLU THR HIS CYS SEQRES 22 B 346 VAL GLY LYS LEU TYR ALA PRO GLY GLU VAL ASP LEU ASN SEQRES 23 B 346 GLU TRP THR LEU ARG GLY GLU PRO ASP THR THR VAL THR SEQRES 24 B 346 ILE ARG GLN PRO ALA THR PRO ALA LEU THR CYS ALA THR SEQRES 25 B 346 VAL LEU ASN ARG LEU PRO GLN LEU LEU ALA ALA PRO PRO SEQRES 26 B 346 GLY PHE VAL THR THR ASP ARG PHE THR PRO ALA THR TYR SEQRES 27 B 346 VAL SER ARG LEU GLU THR GLU ALA HET NAP B 401 48 HET HAI B 402 7 HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETNAM HAI CYCLOHEXYLAMMONIUM ION HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE FORMUL 3 NAP C21 H28 N7 O17 P3 FORMUL 4 HAI C6 H14 N 1+ FORMUL 5 HOH *260(H2 O) HELIX 1 AA1 GLY A 14 LYS A 27 1 14 HELIX 2 AA2 ASP A 45 GLY A 51 1 7 HELIX 3 AA3 PRO A 62 ASP A 64 5 3 HELIX 4 AA4 GLN A 65 ARG A 74 1 10 HELIX 5 AA5 ILE A 85 HIS A 99 1 15 HELIX 6 AA6 GLY A 107 TYR A 112 5 6 HELIX 7 AA7 SER A 117 ASN A 131 1 15 HELIX 8 AA8 PHE A 140 TRP A 145 1 6 HELIX 9 AA9 GLY A 146 GLY A 154 1 9 HELIX 10 AB1 ASP A 171 TYR A 173 5 3 HELIX 11 AB2 GLY A 174 HIS A 181 1 8 HELIX 12 AB3 ASP A 186 ILE A 194 1 9 HELIX 13 AB4 SER A 201 GLY A 215 1 15 HELIX 14 AB5 ALA A 300 ARG A 312 1 13 HELIX 15 AB6 ARG A 312 ALA A 319 1 8 HELIX 16 AB7 THR A 325 PHE A 329 5 5 HELIX 17 AB8 GLY B 14 LYS B 27 1 14 HELIX 18 AB9 ASP B 45 ALA B 50 1 6 HELIX 19 AC1 PRO B 62 ASP B 64 5 3 HELIX 20 AC2 GLN B 65 ARG B 74 1 10 HELIX 21 AC3 ILE B 85 HIS B 99 1 15 HELIX 22 AC4 GLY B 107 TYR B 112 5 6 HELIX 23 AC5 SER B 117 ASN B 131 1 15 HELIX 24 AC6 PHE B 140 TRP B 145 1 6 HELIX 25 AC7 GLY B 146 GLY B 154 1 9 HELIX 26 AC8 ASP B 171 TYR B 173 5 3 HELIX 27 AC9 GLY B 174 HIS B 181 1 8 HELIX 28 AD1 ASP B 186 ASN B 198 1 13 HELIX 29 AD2 SER B 201 GLY B 215 1 15 HELIX 30 AD3 ALA B 300 ARG B 312 1 13 HELIX 31 AD4 ARG B 312 ALA B 319 1 8 HELIX 32 AD5 THR B 325 PHE B 329 5 5 SHEET 1 AA1 2 ARG A 4 PRO A 5 0 SHEET 2 AA1 2 GLU A 339 THR A 340 -1 O THR A 340 N ARG A 4 SHEET 1 AA2 7 ILE A 60 HIS A 61 0 SHEET 2 AA2 7 GLU A 30 ILE A 35 1 N ALA A 34 O HIS A 61 SHEET 3 AA2 7 ARG A 7 TRP A 11 1 N ILE A 8 O VAL A 32 SHEET 4 AA2 7 VAL A 77 LEU A 80 1 O ILE A 79 N TRP A 11 SHEET 5 AA2 7 ASN A 102 THR A 105 1 O ASN A 102 N CYS A 78 SHEET 6 AA2 7 THR A 134 GLY A 137 1 O THR A 134 N ALA A 103 SHEET 7 AA2 7 GLY A 322 PHE A 323 1 O GLY A 322 N LEU A 135 SHEET 1 AA312 VAL A 218 THR A 228 0 SHEET 2 AA312 GLY A 250 THR A 259 -1 O GLU A 258 N ARG A 219 SHEET 3 AA312 VAL A 264 LYS A 272 -1 O ILE A 265 N THR A 257 SHEET 4 AA312 ARG A 158 ASN A 169 1 N GLY A 164 O HIS A 268 SHEET 5 AA312 LEU A 281 GLU A 289 -1 O ARG A 287 N ARG A 161 SHEET 6 AA312 THR A 292 ILE A 296 -1 O VAL A 294 N TRP A 284 SHEET 7 AA312 THR B 292 ARG B 297 -1 O THR B 295 N THR A 295 SHEET 8 AA312 LEU B 281 GLU B 289 -1 N TRP B 284 O VAL B 294 SHEET 9 AA312 ARG B 158 ASN B 169 -1 N ARG B 161 O ARG B 287 SHEET 10 AA312 VAL B 264 LYS B 272 1 O GLU B 266 N ILE B 162 SHEET 11 AA312 GLY B 250 THR B 259 -1 N THR B 257 O ILE B 265 SHEET 12 AA312 VAL B 218 THR B 228 -1 N ARG B 219 O GLU B 258 SHEET 1 AA4 2 LEU A 234 SER A 236 0 SHEET 2 AA4 2 ARG A 241 VAL A 243 -1 O ARG A 241 N SER A 236 SHEET 1 AA5 2 ARG B 4 PRO B 5 0 SHEET 2 AA5 2 GLU B 339 THR B 340 -1 O THR B 340 N ARG B 4 SHEET 1 AA6 7 ILE B 60 HIS B 61 0 SHEET 2 AA6 7 GLU B 30 ILE B 35 1 N ALA B 34 O HIS B 61 SHEET 3 AA6 7 ARG B 7 TRP B 11 1 N ILE B 8 O VAL B 32 SHEET 4 AA6 7 VAL B 77 LEU B 80 1 O ILE B 79 N TRP B 11 SHEET 5 AA6 7 ASN B 102 THR B 105 1 O ASN B 102 N CYS B 78 SHEET 6 AA6 7 THR B 134 GLY B 137 1 O THR B 134 N ALA B 103 SHEET 7 AA6 7 GLY B 322 PHE B 323 1 O GLY B 322 N LEU B 135 SHEET 1 AA7 2 LEU B 234 SER B 236 0 SHEET 2 AA7 2 ARG B 241 VAL B 243 -1 O ARG B 241 N SER B 236 CISPEP 1 GLU A 289 PRO A 290 0 -11.55 CISPEP 2 GLU B 289 PRO B 290 0 -11.42 SITE 1 AC1 28 TRP B 11 GLY B 12 GLY B 14 LEU B 15 SITE 2 AC1 28 MET B 16 ASP B 36 HIS B 37 ASN B 38 SITE 3 AC1 28 ARG B 41 PRO B 63 CYS B 81 THR B 82 SITE 4 AC1 28 ARG B 83 SER B 84 ILE B 106 GLU B 108 SITE 5 AC1 28 SER B 138 GLY B 139 PHE B 140 GLN B 141 SITE 6 AC1 28 TYR B 173 GLY B 174 ALA B 176 LEU B 177 SITE 7 AC1 28 TYR B 202 THR B 305 HAI B 402 HOH B 529 SITE 1 AC2 7 GLU B 108 PHE B 140 TRP B 145 TYR B 168 SITE 2 AC2 7 LEU B 177 TYR B 202 NAP B 401 CRYST1 51.000 87.000 143.000 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019608 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011494 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006993 0.00000