HEADER TRANSCRIPTION 29-NOV-18 6IB8
TITLE STRUCTURE OF A COMPLEX OF SUHB AND NUSA AR2 DOMAIN
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: INOSITOL-1-MONOPHOSPHATASE;
COMPND 3 CHAIN: A, B;
COMPND 4 SYNONYM: INOSITOL-1-PHOSPHATASE;
COMPND 5 EC: 3.1.3.25;
COMPND 6 ENGINEERED: YES;
COMPND 7 MOL_ID: 2;
COMPND 8 MOLECULE: TRANSCRIPTION TERMINATION/ANTITERMINATION PROTEIN NUSA;
COMPND 9 CHAIN: C;
COMPND 10 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI;
SOURCE 3 ORGANISM_TAXID: 562;
SOURCE 4 GENE: SUHB, SSYA, B2533, JW2517;
SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);
SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008;
SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PETM-11;
SOURCE 9 MOL_ID: 2;
SOURCE 10 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI;
SOURCE 11 ORGANISM_TAXID: 562;
SOURCE 12 GENE: NUSA, ECS4050;
SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);
SOURCE 14 EXPRESSION_SYSTEM_TAXID: 469008;
SOURCE 15 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 16 EXPRESSION_SYSTEM_PLASMID: PETM-11
KEYWDS SUHB, NUSA AR2 DOMAIN, ANTITERMIANTION, TRANSCRIPTION
EXPDTA X-RAY DIFFRACTION
AUTHOR Y.H.HUANG,B.LOLL,M.C.WAHL
REVDAT 3 24-JAN-24 6IB8 1 LINK
REVDAT 2 30-OCT-19 6IB8 1 JRNL
REVDAT 1 17-APR-19 6IB8 0
JRNL AUTH Y.H.HUANG,N.SAID,B.LOLL,M.C.WAHL
JRNL TITL STRUCTURAL BASIS FOR THE FUNCTION OF SUHB AS A TRANSCRIPTION
JRNL TITL 2 FACTOR IN RIBOSOMAL RNA SYNTHESIS.
JRNL REF NUCLEIC ACIDS RES. V. 47 6488 2019
JRNL REFN ESSN 1362-4962
JRNL PMID 31020314
JRNL DOI 10.1093/NAR/GKZ290
REMARK 2
REMARK 2 RESOLUTION. 1.65 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : PHENIX (1.13_2998: ???)
REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN
REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,
REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,
REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,
REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON,
REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,
REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT
REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART
REMARK 3
REMARK 3 REFINEMENT TARGET : NULL
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.63
REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340
REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1
REMARK 3 NUMBER OF REFLECTIONS : 77933
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 R VALUE (WORKING + TEST SET) : 0.183
REMARK 3 R VALUE (WORKING SET) : 0.182
REMARK 3 FREE R VALUE : 0.219
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.690
REMARK 3 FREE R VALUE TEST SET COUNT : 2095
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS).
REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE
REMARK 3 1 30.6394 - 4.0560 0.98 5305 146 0.1788 0.2030
REMARK 3 2 4.0560 - 3.2205 0.99 5168 143 0.1660 0.2158
REMARK 3 3 3.2205 - 2.8137 1.00 5127 141 0.1735 0.1974
REMARK 3 4 2.8137 - 2.5566 1.00 5109 141 0.1653 0.2023
REMARK 3 5 2.5566 - 2.3734 1.00 5122 142 0.1657 0.1947
REMARK 3 6 2.3734 - 2.2335 1.00 5081 140 0.1665 0.2246
REMARK 3 7 2.2335 - 2.1217 1.00 5063 140 0.1627 0.2073
REMARK 3 8 2.1217 - 2.0294 1.00 5072 140 0.1682 0.1963
REMARK 3 9 2.0294 - 1.9513 1.00 5044 139 0.1824 0.2478
REMARK 3 10 1.9513 - 1.8839 1.00 5063 140 0.2109 0.2568
REMARK 3 11 1.8839 - 1.8250 1.00 5050 139 0.2234 0.2436
REMARK 3 12 1.8250 - 1.7729 1.00 5035 139 0.2452 0.2898
REMARK 3 13 1.7729 - 1.7262 1.00 5037 140 0.2868 0.3743
REMARK 3 14 1.7262 - 1.6841 1.00 5039 139 0.3160 0.3524
REMARK 3 15 1.6841 - 1.6458 0.90 4523 126 0.3764 0.4187
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : NULL
REMARK 3 SOLVENT RADIUS : 1.11
REMARK 3 SHRINKAGE RADIUS : 0.90
REMARK 3 K_SOL : NULL
REMARK 3 B_SOL : NULL
REMARK 3
REMARK 3 ERROR ESTIMATES.
REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250
REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.840
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : NULL
REMARK 3 B22 (A**2) : NULL
REMARK 3 B33 (A**2) : NULL
REMARK 3 B12 (A**2) : NULL
REMARK 3 B13 (A**2) : NULL
REMARK 3 B23 (A**2) : NULL
REMARK 3
REMARK 3 TWINNING INFORMATION.
REMARK 3 FRACTION: NULL
REMARK 3 OPERATOR: NULL
REMARK 3
REMARK 3 DEVIATIONS FROM IDEAL VALUES.
REMARK 3 RMSD COUNT
REMARK 3 BOND : 0.015 4932
REMARK 3 ANGLE : 1.009 6693
REMARK 3 CHIRALITY : 0.081 744
REMARK 3 PLANARITY : 0.006 891
REMARK 3 DIHEDRAL : 7.240 3936
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : NULL
REMARK 3
REMARK 3 NCS DETAILS
REMARK 3 NUMBER OF NCS GROUPS : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 6IB8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-NOV-18.
REMARK 100 THE DEPOSITION ID IS D_1200013137.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 06-OCT-17
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 8.5
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : BESSY
REMARK 200 BEAMLINE : 14.2
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.91841
REMARK 200 MONOCHROMATOR : KMC-2
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : PIXEL
REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS
REMARK 200 DATA SCALING SOFTWARE : XSCALE
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 78162
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.646
REMARK 200 RESOLUTION RANGE LOW (A) : 50.000
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1
REMARK 200 DATA REDUNDANCY : 5.500
REMARK 200 R MERGE (I) : NULL
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.2000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74
REMARK 200 COMPLETENESS FOR SHELL (%) : 95.7
REMARK 200 DATA REDUNDANCY IN SHELL : 5.10
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : 0.920
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: 2QFL, 1WCN
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 48.84
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS-HCL PH 8.5, 5% (W/V) PEG
REMARK 280 8000, 16% (V/V) PEG 300, 10% (V/V) GLYCEROL, VAPOR DIFFUSION,
REMARK 280 SITTING DROP, TEMPERATURE 291K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X+1/2,-Y,Z+1/2
REMARK 290 3555 -X,Y+1/2,-Z+1/2
REMARK 290 4555 X+1/2,-Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 32.13500
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.27100
REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.77000
REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.27100
REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.13500
REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 47.77000
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 7360 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 24510 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 GLY A -3
REMARK 465 ALA A -2
REMARK 465 MET A -1
REMARK 465 ALA A 0
REMARK 465 GLN A 33
REMARK 465 LYS A 34
REMARK 465 GLY A 35
REMARK 465 SER A 36
REMARK 465 ASN A 37
REMARK 465 ASP A 38
REMARK 465 LYS A 266
REMARK 465 ARG A 267
REMARK 465 ARG B 267
REMARK 465 GLY C 424
REMARK 465 ALA C 425
REMARK 465 MET C 426
REMARK 465 ASP C 427
REMARK 465 ASP C 493
REMARK 465 GLU C 494
REMARK 465 ALA C 495
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 O HOH A 401 O HOH A 472 1.90
REMARK 500 OD2 ASP A 84 O HOH A 401 2.10
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3
REMARK 500 ASP C 433 CB - CG - OD1 ANGL. DEV. = 6.4 DEGREES
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 PRO A 97 48.98 -82.85
REMARK 500 ASP A 147 -167.32 -166.61
REMARK 500 ASP A 147 -167.32 -160.93
REMARK 500 ALA A 161 62.14 -150.11
REMARK 500 LYS B 34 -70.47 -74.92
REMARK 500 ASP B 147 -165.93 -162.28
REMARK 500 ALA B 161 66.00 -151.14
REMARK 500
REMARK 500 REMARK: NULL
REMARK 610
REMARK 610 MISSING HETEROATOM
REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 610 I=INSERTION CODE):
REMARK 610 M RES C SSEQI
REMARK 610 PE4 A 304
REMARK 610 PE4 B 307
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 MG A 303 MG
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 GLU A 67 OE2
REMARK 620 2 ASP A 84 OD1 92.1
REMARK 620 3 LEU A 86 O 168.6 82.8
REMARK 620 4 HOH A 404 O 85.0 90.1 84.8
REMARK 620 5 HOH A 429 O 91.3 175.8 93.4 87.7
REMARK 620 6 HOH A 472 O 96.2 109.8 95.1 159.9 72.3
REMARK 620 N 1 2 3 4 5
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 MG B 306 MG
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 ASP B 84 OD1
REMARK 620 2 LEU B 86 O 90.2
REMARK 620 3 HOH B 402 O 96.0 78.5
REMARK 620 4 HOH B 413 O 174.9 89.7 89.0
REMARK 620 5 HOH B 504 O 80.8 160.7 85.4 100.8
REMARK 620 N 1 2 3 4
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 301
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 302
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 303
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue PE4 A 304
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC5
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 301
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC6
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 302
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC7
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 303
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC8
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 304
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC9
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 305
REMARK 800
REMARK 800 SITE_IDENTIFIER: AD1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 306
REMARK 800
REMARK 800 SITE_IDENTIFIER: AD2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue PE4 B 307
REMARK 800
REMARK 800 SITE_IDENTIFIER: AD3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 501
DBREF 6IB8 A 1 267 UNP P0ADG4 SUHB_ECOLI 1 267
DBREF 6IB8 B 1 267 UNP P0ADG4 SUHB_ECOLI 1 267
DBREF 6IB8 C 427 495 UNP C3SSP1 C3SSP1_ECOLX 427 495
SEQADV 6IB8 GLY A -3 UNP P0ADG4 EXPRESSION TAG
SEQADV 6IB8 ALA A -2 UNP P0ADG4 EXPRESSION TAG
SEQADV 6IB8 MET A -1 UNP P0ADG4 EXPRESSION TAG
SEQADV 6IB8 ALA A 0 UNP P0ADG4 EXPRESSION TAG
SEQADV 6IB8 GLY B -3 UNP P0ADG4 EXPRESSION TAG
SEQADV 6IB8 ALA B -2 UNP P0ADG4 EXPRESSION TAG
SEQADV 6IB8 MET B -1 UNP P0ADG4 EXPRESSION TAG
SEQADV 6IB8 ALA B 0 UNP P0ADG4 EXPRESSION TAG
SEQADV 6IB8 GLY C 424 UNP C3SSP1 EXPRESSION TAG
SEQADV 6IB8 ALA C 425 UNP C3SSP1 EXPRESSION TAG
SEQADV 6IB8 MET C 426 UNP C3SSP1 EXPRESSION TAG
SEQRES 1 A 271 GLY ALA MET ALA MET HIS PRO MET LEU ASN ILE ALA VAL
SEQRES 2 A 271 ARG ALA ALA ARG LYS ALA GLY ASN LEU ILE ALA LYS ASN
SEQRES 3 A 271 TYR GLU THR PRO ASP ALA VAL GLU ALA SER GLN LYS GLY
SEQRES 4 A 271 SER ASN ASP PHE VAL THR ASN VAL ASP LYS ALA ALA GLU
SEQRES 5 A 271 ALA VAL ILE ILE ASP THR ILE ARG LYS SER TYR PRO GLN
SEQRES 6 A 271 HIS THR ILE ILE THR GLU GLU SER GLY GLU LEU GLU GLY
SEQRES 7 A 271 THR ASP GLN ASP VAL GLN TRP VAL ILE ASP PRO LEU ASP
SEQRES 8 A 271 GLY THR THR ASN PHE ILE LYS ARG LEU PRO HIS PHE ALA
SEQRES 9 A 271 VAL SER ILE ALA VAL ARG ILE LYS GLY ARG THR GLU VAL
SEQRES 10 A 271 ALA VAL VAL TYR ASP PRO MET ARG ASN GLU LEU PHE THR
SEQRES 11 A 271 ALA THR ARG GLY GLN GLY ALA GLN LEU ASN GLY TYR ARG
SEQRES 12 A 271 LEU ARG GLY SER THR ALA ARG ASP LEU ASP GLY THR ILE
SEQRES 13 A 271 LEU ALA THR GLY PHE PRO PHE LYS ALA LYS GLN TYR ALA
SEQRES 14 A 271 THR THR TYR ILE ASN ILE VAL GLY LYS LEU PHE ASN GLU
SEQRES 15 A 271 CYS ALA ASP PHE ARG ARG THR GLY SER ALA ALA LEU ASP
SEQRES 16 A 271 LEU ALA TYR VAL ALA ALA GLY ARG VAL ASP GLY PHE PHE
SEQRES 17 A 271 GLU ILE GLY LEU ARG PRO TRP ASP PHE ALA ALA GLY GLU
SEQRES 18 A 271 LEU LEU VAL ARG GLU ALA GLY GLY ILE VAL SER ASP PHE
SEQRES 19 A 271 THR GLY GLY HIS ASN TYR MET LEU THR GLY ASN ILE VAL
SEQRES 20 A 271 ALA GLY ASN PRO ARG VAL VAL LYS ALA MET LEU ALA ASN
SEQRES 21 A 271 MET ARG ASP GLU LEU SER ASP ALA LEU LYS ARG
SEQRES 1 B 271 GLY ALA MET ALA MET HIS PRO MET LEU ASN ILE ALA VAL
SEQRES 2 B 271 ARG ALA ALA ARG LYS ALA GLY ASN LEU ILE ALA LYS ASN
SEQRES 3 B 271 TYR GLU THR PRO ASP ALA VAL GLU ALA SER GLN LYS GLY
SEQRES 4 B 271 SER ASN ASP PHE VAL THR ASN VAL ASP LYS ALA ALA GLU
SEQRES 5 B 271 ALA VAL ILE ILE ASP THR ILE ARG LYS SER TYR PRO GLN
SEQRES 6 B 271 HIS THR ILE ILE THR GLU GLU SER GLY GLU LEU GLU GLY
SEQRES 7 B 271 THR ASP GLN ASP VAL GLN TRP VAL ILE ASP PRO LEU ASP
SEQRES 8 B 271 GLY THR THR ASN PHE ILE LYS ARG LEU PRO HIS PHE ALA
SEQRES 9 B 271 VAL SER ILE ALA VAL ARG ILE LYS GLY ARG THR GLU VAL
SEQRES 10 B 271 ALA VAL VAL TYR ASP PRO MET ARG ASN GLU LEU PHE THR
SEQRES 11 B 271 ALA THR ARG GLY GLN GLY ALA GLN LEU ASN GLY TYR ARG
SEQRES 12 B 271 LEU ARG GLY SER THR ALA ARG ASP LEU ASP GLY THR ILE
SEQRES 13 B 271 LEU ALA THR GLY PHE PRO PHE LYS ALA LYS GLN TYR ALA
SEQRES 14 B 271 THR THR TYR ILE ASN ILE VAL GLY LYS LEU PHE ASN GLU
SEQRES 15 B 271 CYS ALA ASP PHE ARG ARG THR GLY SER ALA ALA LEU ASP
SEQRES 16 B 271 LEU ALA TYR VAL ALA ALA GLY ARG VAL ASP GLY PHE PHE
SEQRES 17 B 271 GLU ILE GLY LEU ARG PRO TRP ASP PHE ALA ALA GLY GLU
SEQRES 18 B 271 LEU LEU VAL ARG GLU ALA GLY GLY ILE VAL SER ASP PHE
SEQRES 19 B 271 THR GLY GLY HIS ASN TYR MET LEU THR GLY ASN ILE VAL
SEQRES 20 B 271 ALA GLY ASN PRO ARG VAL VAL LYS ALA MET LEU ALA ASN
SEQRES 21 B 271 MET ARG ASP GLU LEU SER ASP ALA LEU LYS ARG
SEQRES 1 C 72 GLY ALA MET ASP ASN LYS PRO ALA ASP ASP LEU LEU ASN
SEQRES 2 C 72 LEU GLU GLY VAL ASP ARG ASP LEU ALA PHE LYS LEU ALA
SEQRES 3 C 72 ALA ARG GLY VAL CYS THR LEU GLU ASP LEU ALA GLU GLN
SEQRES 4 C 72 GLY ILE ASP ASP LEU ALA ASP ILE GLU GLY LEU THR ASP
SEQRES 5 C 72 GLU LYS ALA GLY ALA LEU ILE MET ALA ALA ARG ASN ILE
SEQRES 6 C 72 CYS TRP PHE GLY ASP GLU ALA
HET GOL A 301 6
HET GOL A 302 6
HET MG A 303 1
HET PE4 A 304 10
HET GOL B 301 6
HET GOL B 302 6
HET GOL B 303 6
HET GOL B 304 6
HET GOL B 305 12
HET MG B 306 1
HET PE4 B 307 7
HET GOL C 501 6
HETNAM GOL GLYCEROL
HETNAM MG MAGNESIUM ION
HETNAM PE4 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-
HETNAM 2 PE4 ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL
HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL
HETSYN PE4 POLYETHYLENE GLYCOL PEG4000
FORMUL 4 GOL 8(C3 H8 O3)
FORMUL 6 MG 2(MG 2+)
FORMUL 7 PE4 2(C16 H34 O8)
FORMUL 16 HOH *263(H2 O)
HELIX 1 AA1 HIS A 2 GLU A 24 1 23
HELIX 2 AA2 ASP A 27 SER A 32 1 6
HELIX 3 AA3 ASN A 42 TYR A 59 1 18
HELIX 4 AA4 GLY A 88 LYS A 94 1 7
HELIX 5 AA5 ALA A 161 GLN A 163 5 3
HELIX 6 AA6 TYR A 164 ASN A 177 1 14
HELIX 7 AA7 SER A 187 ALA A 197 1 11
HELIX 8 AA8 ARG A 209 ALA A 223 1 15
HELIX 9 AA9 ASN A 235 GLY A 240 1 6
HELIX 10 AB1 ASN A 246 LEU A 265 1 20
HELIX 11 AB2 HIS B 2 THR B 25 1 24
HELIX 12 AB3 PRO B 26 VAL B 29 5 4
HELIX 13 AB4 ASN B 42 TYR B 59 1 18
HELIX 14 AB5 GLY B 88 ARG B 95 1 8
HELIX 15 AB6 ALA B 161 GLN B 163 5 3
HELIX 16 AB7 TYR B 164 ASN B 177 1 14
HELIX 17 AB8 SER B 187 ALA B 197 1 11
HELIX 18 AB9 ARG B 209 ALA B 223 1 15
HELIX 19 AC1 ASN B 235 GLY B 240 1 6
HELIX 20 AC2 ASN B 246 ARG B 258 1 13
HELIX 21 AC3 ASP B 259 LEU B 261 5 3
HELIX 22 AC4 ALA C 431 ASN C 436 1 6
HELIX 23 AC5 ASP C 441 ARG C 451 1 11
HELIX 24 AC6 THR C 455 GLU C 461 1 7
HELIX 25 AC7 GLY C 463 ALA C 468 5 6
HELIX 26 AC8 THR C 474 TRP C 490 1 17
SHEET 1 AA1 8 GLY A 70 LEU A 72 0
SHEET 2 AA1 8 HIS A 62 THR A 66 -1 N ILE A 64 O LEU A 72
SHEET 3 AA1 8 ASP A 76 ASP A 87 1 O TRP A 81 N ILE A 65
SHEET 4 AA1 8 ALA A 100 ILE A 107 -1 O ALA A 100 N ASP A 87
SHEET 5 AA1 8 ARG A 110 ASP A 118 -1 O GLU A 112 N VAL A 105
SHEET 6 AA1 8 GLU A 123 THR A 128 -1 O PHE A 125 N VAL A 116
SHEET 7 AA1 8 GLY A 132 LEU A 135 -1 O GLN A 134 N THR A 126
SHEET 8 AA1 8 TYR A 138 ARG A 139 -1 O TYR A 138 N LEU A 135
SHEET 1 AA2 5 ASP A 181 ARG A 183 0
SHEET 2 AA2 5 ILE A 152 THR A 155 1 N LEU A 153 O ASP A 181
SHEET 3 AA2 5 GLY A 202 GLU A 205 1 O GLY A 202 N ALA A 154
SHEET 4 AA2 5 ILE A 242 GLY A 245 -1 O ILE A 242 N GLU A 205
SHEET 5 AA2 5 ILE A 226 SER A 228 -1 N ILE A 226 O GLY A 245
SHEET 1 AA3 2 ALA B 31 GLY B 35 0
SHEET 2 AA3 2 ASP B 38 THR B 41 -1 O ASP B 38 N LYS B 34
SHEET 1 AA4 8 GLY B 70 LEU B 72 0
SHEET 2 AA4 8 HIS B 62 THR B 66 -1 N ILE B 64 O LEU B 72
SHEET 3 AA4 8 ASP B 76 ASP B 87 1 O TRP B 81 N ILE B 65
SHEET 4 AA4 8 ALA B 100 ILE B 107 -1 O ALA B 100 N ASP B 87
SHEET 5 AA4 8 ARG B 110 ASP B 118 -1 O GLU B 112 N VAL B 105
SHEET 6 AA4 8 GLU B 123 THR B 128 -1 O PHE B 125 N VAL B 116
SHEET 7 AA4 8 GLY B 132 LEU B 135 -1 O GLN B 134 N THR B 126
SHEET 8 AA4 8 TYR B 138 ARG B 139 -1 O TYR B 138 N LEU B 135
SHEET 1 AA5 5 ASP B 181 ARG B 183 0
SHEET 2 AA5 5 ILE B 152 THR B 155 1 N LEU B 153 O ASP B 181
SHEET 3 AA5 5 GLY B 202 GLU B 205 1 O GLY B 202 N ALA B 154
SHEET 4 AA5 5 ILE B 242 GLY B 245 -1 O ILE B 242 N GLU B 205
SHEET 5 AA5 5 ILE B 226 SER B 228 -1 N ILE B 226 O GLY B 245
LINK OE2AGLU A 67 MG MG A 303 1555 1555 2.26
LINK OD1 ASP A 84 MG MG A 303 1555 1555 2.23
LINK O LEU A 86 MG MG A 303 1555 1555 2.46
LINK MG MG A 303 O HOH A 404 1555 1555 2.23
LINK MG MG A 303 O HOH A 429 1555 1555 2.02
LINK MG MG A 303 O HOH A 472 1555 1555 2.18
LINK OD1 ASP B 84 MG MG B 306 1555 1555 2.28
LINK O LEU B 86 MG MG B 306 1555 1555 2.21
LINK MG MG B 306 O HOH B 402 1555 1555 2.23
LINK MG MG B 306 O HOH B 413 1555 1555 2.09
LINK MG MG B 306 O HOH B 504 1555 1555 2.57
SITE 1 AC1 7 ASP A 87 ARG A 184 GLY A 186 SER A 187
SITE 2 AC1 7 ALA A 188 GLU A 205 HOH A 432
SITE 1 AC2 8 ALA A 46 VAL A 50 ASP A 53 GLY B 130
SITE 2 AC2 8 GLN B 131 GLY B 132 ARG B 139 HOH B 419
SITE 1 AC3 6 GLU A 67 ASP A 84 LEU A 86 HOH A 404
SITE 2 AC3 6 HOH A 429 HOH A 472
SITE 1 AC4 5 TYR A 164 ILE A 206 GLY A 207 THR A 239
SITE 2 AC4 5 ASN A 241
SITE 1 AC5 8 ASP B 87 PHE B 159 ARG B 184 GLY B 186
SITE 2 AC5 8 SER B 187 ALA B 188 GLU B 205 HOH B 423
SITE 1 AC6 4 GLN A 80 ARG A 106 PRO A 210 HOH B 415
SITE 1 AC7 7 ARG B 106 ARG B 110 THR B 111 GLU B 217
SITE 2 AC7 7 TYR B 236 MET B 237 HOH B 473
SITE 1 AC8 3 THR A 89 GLY B -3 HOH B 477
SITE 1 AC9 7 HIS A 98 ARG A 121 THR A 185 HIS B 98
SITE 2 AC9 7 ARG B 121 THR B 185 TYR B 194
SITE 1 AD1 5 ASP B 84 LEU B 86 HOH B 402 HOH B 413
SITE 2 AD1 5 HOH B 504
SITE 1 AD2 2 ASN B 22 ASN B 42
SITE 1 AD3 6 GLY A 224 ILE A 226 GLU C 461 GLY C 463
SITE 2 AD3 6 ASP C 466 HOH C 606
CRYST1 64.270 95.540 104.542 90.00 90.00 90.00 P 21 21 21 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.015559 0.000000 0.000000 0.00000
SCALE2 0.000000 0.010467 0.000000 0.00000
SCALE3 0.000000 0.000000 0.009566 0.00000