HEADER TRANSFERASE 08-SEP-18 6ID6 TITLE CRYSTAL STRUCTURE OF RV0731C FROM MYCOBACTERIUM TUBERCULOSIS AT 1.63 TITLE 2 ANGSTROMS. COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE S-ADENOSYL-L-METHIONINE-DEPENDENT COMPND 3 METHYLTRANSFERASE RV0731C; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: UNP RESIDUES 11-311; COMPND 6 EC: 2.1.1.-; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS H37RV; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 STRAIN: H37RV; SOURCE 5 GENE: RV0731C; SOURCE 6 EXPRESSION_SYSTEM: MYCOLICIBACTERIUM SMEGMATIS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 1772 KEYWDS METHYLTRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR H.BANSIA,S.M.KALLADI,V.NAGARAJA,S.RAMAKUMAR REVDAT 3 27-MAR-24 6ID6 1 LINK REVDAT 2 25-SEP-19 6ID6 1 SOURCE REVDAT 1 11-SEP-19 6ID6 0 JRNL AUTH H.BANSIA,S.M.KALLADI,V.NAGARAJA,S.RAMAKUMAR JRNL TITL CRYSTAL STRUCTURE OF RV0731C FROM MYCOBACTERIUM JRNL TITL 2 TUBERCULOSIS. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.63 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0232 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.63 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.47 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 42530 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.155 REMARK 3 R VALUE (WORKING SET) : 0.154 REMARK 3 FREE R VALUE : 0.187 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2203 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.63 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3154 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.88 REMARK 3 BIN R VALUE (WORKING SET) : 0.2420 REMARK 3 BIN FREE R VALUE SET COUNT : 162 REMARK 3 BIN FREE R VALUE : 0.2820 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2302 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 12 REMARK 3 SOLVENT ATOMS : 376 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 13.45 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.24000 REMARK 3 B22 (A**2) : 0.24000 REMARK 3 B33 (A**2) : -0.48000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.075 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.078 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.053 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.047 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.952 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2384 ; 0.012 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 2194 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3247 ; 1.706 ; 1.641 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5034 ; 1.589 ; 1.578 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 311 ; 5.944 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 144 ;29.042 ;20.486 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 358 ;11.108 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 27 ;14.974 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 313 ; 0.095 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2779 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 562 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 11 A 401 REMARK 3 ORIGIN FOR THE GROUP (A): -13.0746 -39.6023 -7.8667 REMARK 3 T TENSOR REMARK 3 T11: 0.0111 T22: 0.0143 REMARK 3 T33: 0.0072 T12: 0.0109 REMARK 3 T13: 0.0034 T23: 0.0027 REMARK 3 L TENSOR REMARK 3 L11: 0.0933 L22: 0.0576 REMARK 3 L33: 0.3322 L12: -0.0703 REMARK 3 L13: 0.0666 L23: -0.0310 REMARK 3 S TENSOR REMARK 3 S11: -0.0051 S12: 0.0092 S13: -0.0026 REMARK 3 S21: 0.0074 S22: -0.0008 S23: 0.0013 REMARK 3 S31: -0.0287 S32: -0.0066 S33: 0.0059 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 SF FILE CONTAINS FRIEDEL PAIRS UNDER I/F_MINUS AND I/F_PLUS REMARK 3 COLUMNS. REMARK 3 REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REMARK 3 WITH TLS ADDED REMARK 4 REMARK 4 6ID6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-SEP-18. REMARK 100 THE DEPOSITION ID IS D_1300009014. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-MAR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97633 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.6.3 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44735 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.630 REMARK 200 RESOLUTION RANGE LOW (A) : 38.470 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 8.100 REMARK 200 R MERGE (I) : 0.11600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.63 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : 1.00400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: THE ENTRY CONTAINS FRIEDEL PAIRS IN I/F_PLUS/MINUS REMARK 200 COLUMNS. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.69 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.71 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200MM MAGNESIUM ACETATE, TRIS-HCL PH REMARK 280 8.5, PEG 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 8555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 66.84000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 66.84000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 20.08500 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 66.84000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 66.84000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 20.08500 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 66.84000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 66.84000 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 20.08500 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 66.84000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 66.84000 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 20.08500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 70 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 811 LIES ON A SPECIAL POSITION. REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 74 CG CD OE1 OE2 REMARK 470 ARG A 124 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 166 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 174 CG CD OE1 NE2 REMARK 470 LYS A 175 CG CD CE NZ REMARK 470 ARG A 202 CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 232 O HOH A 501 1.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 167 -169.14 -101.33 REMARK 500 LEU A 191 -52.03 -125.00 REMARK 500 ALA A 298 77.05 -114.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 876 DISTANCE = 6.50 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 403 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 71 OE2 REMARK 620 2 HOH A 539 O 25.1 REMARK 620 3 HOH A 565 O 35.2 10.3 REMARK 620 4 HOH A 614 O 29.3 4.6 6.9 REMARK 620 5 HOH A 718 O 31.3 7.2 7.1 2.9 REMARK 620 6 HOH A 746 O 31.3 6.8 4.3 5.2 7.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 566 O REMARK 620 2 HOH A 585 O 96.0 REMARK 620 3 HOH A 608 O 94.2 88.8 REMARK 620 4 HOH A 764 O 82.0 85.8 173.0 REMARK 620 5 HOH A 809 O 175.1 88.0 88.7 95.5 REMARK 620 6 HOH A 871 O 90.3 173.6 91.6 94.3 85.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 403 DBREF 6ID6 A 11 311 UNP P9WFI5 Y756_MYCTU 11 311 SEQADV 6ID6 ALA A 312 UNP P9WFI5 EXPRESSION TAG SEQRES 1 A 302 GLY ASP SER TRP ASP LEU ALA SER SER VAL GLY LEU THR SEQRES 2 A 302 ALA THR MET VAL ALA ALA ALA ARG ALA VAL ALA GLY ARG SEQRES 3 A 302 ALA PRO GLY ALA LEU VAL ASN ASP GLN PHE ALA GLU PRO SEQRES 4 A 302 LEU VAL ARG ALA VAL GLY VAL ASP PHE PHE VAL ARG MET SEQRES 5 A 302 ALA SER GLY GLU LEU ASP PRO ASP GLU LEU ALA GLU ASP SEQRES 6 A 302 GLU ALA ASN GLY LEU ARG ARG PHE ALA ASP ALA MET ALA SEQRES 7 A 302 ILE ARG THR HIS TYR PHE ASP ASN PHE PHE LEU ASP ALA SEQRES 8 A 302 THR ARG ALA GLY ILE ARG GLN ALA VAL ILE LEU ALA SER SEQRES 9 A 302 GLY LEU ASP SER ARG ALA TYR ARG LEU ARG TRP PRO ALA SEQRES 10 A 302 GLY THR ILE VAL PHE GLU VAL ASP GLN PRO GLN VAL ILE SEQRES 11 A 302 ASP PHE LYS THR THR THR LEU ALA GLY LEU GLY ALA ALA SEQRES 12 A 302 PRO THR THR ASP ARG ARG THR VAL ALA VAL ASP LEU ARG SEQRES 13 A 302 ASP ASP TRP PRO THR ALA LEU GLN LYS ALA GLY PHE ASP SEQRES 14 A 302 ASN ALA GLN ARG THR ALA TRP ILE ALA GLU GLY LEU LEU SEQRES 15 A 302 GLY TYR LEU SER ALA GLU ALA GLN ASP ARG LEU LEU ASP SEQRES 16 A 302 GLN ILE THR ALA GLN SER VAL PRO GLY SER GLN PHE ALA SEQRES 17 A 302 THR GLU VAL LEU ARG ASP ILE ASN ARG LEU ASN GLU GLU SEQRES 18 A 302 GLU LEU ARG GLY ARG MET ARG ARG LEU ALA GLU ARG PHE SEQRES 19 A 302 ARG ARG HIS GLY LEU ASP LEU ASP MET SER GLY LEU VAL SEQRES 20 A 302 TYR PHE GLY ASP ARG THR ASP ALA ARG THR TYR LEU ALA SEQRES 21 A 302 ASP HIS GLY TRP ARG THR ALA SER ALA SER THR THR ASP SEQRES 22 A 302 LEU LEU ALA GLU HIS GLY LEU PRO PRO ILE ASP GLY ASP SEQRES 23 A 302 ASP ALA PRO PHE GLY GLU VAL ILE TYR VAL SER ALA GLU SEQRES 24 A 302 LEU LYS ALA HET PGE A 401 10 HET MG A 402 1 HET MG A 403 1 HETNAM PGE TRIETHYLENE GLYCOL HETNAM MG MAGNESIUM ION FORMUL 2 PGE C6 H14 O4 FORMUL 3 MG 2(MG 2+) FORMUL 5 HOH *376(H2 O) HELIX 1 AA1 ASP A 15 VAL A 20 5 6 HELIX 2 AA2 GLY A 21 ARG A 36 1 16 HELIX 3 AA3 PHE A 46 GLY A 55 1 10 HELIX 4 AA4 VAL A 56 GLY A 65 1 10 HELIX 5 AA5 ASP A 68 LEU A 72 5 5 HELIX 6 AA6 ALA A 73 ALA A 104 1 32 HELIX 7 AA7 SER A 118 LEU A 123 1 6 HELIX 8 AA8 GLN A 136 LEU A 150 1 15 HELIX 9 AA9 ASP A 168 ALA A 176 1 9 HELIX 10 AB1 LEU A 191 LEU A 195 5 5 HELIX 11 AB2 SER A 196 GLN A 210 1 15 HELIX 12 AB3 ASN A 229 HIS A 247 1 19 HELIX 13 AB4 ASP A 252 LEU A 256 5 5 HELIX 14 AB5 ASP A 264 HIS A 272 1 9 HELIX 15 AB6 THR A 281 HIS A 288 1 8 HELIX 16 AB7 ASP A 294 ALA A 298 5 5 SHEET 1 AA1 7 ASP A 157 ALA A 162 0 SHEET 2 AA1 7 ILE A 130 ASP A 135 1 N GLU A 133 O VAL A 161 SHEET 3 AA1 7 GLN A 108 LEU A 112 1 N ALA A 109 O PHE A 132 SHEET 4 AA1 7 ALA A 185 ALA A 188 1 O ILE A 187 N LEU A 112 SHEET 5 AA1 7 GLN A 216 LEU A 222 1 O GLN A 216 N TRP A 186 SHEET 6 AA1 7 VAL A 303 LEU A 310 -1 O VAL A 306 N THR A 219 SHEET 7 AA1 7 TRP A 274 SER A 280 -1 N ALA A 279 O TYR A 305 LINK OE2 GLU A 71 MG MG A 403 1555 7444 2.06 LINK MG MG A 402 O HOH A 566 1555 1555 2.13 LINK MG MG A 402 O HOH A 585 1555 1556 2.22 LINK MG MG A 402 O HOH A 608 1555 1556 2.02 LINK MG MG A 402 O HOH A 764 1555 1555 2.05 LINK MG MG A 402 O HOH A 809 1555 1556 2.09 LINK MG MG A 402 O HOH A 871 1555 1556 2.02 LINK MG MG A 403 O HOH A 539 1555 8545 2.04 LINK MG MG A 403 O HOH A 565 1555 1555 2.21 LINK MG MG A 403 O HOH A 614 1555 8545 2.03 LINK MG MG A 403 O HOH A 718 1555 1555 2.14 LINK MG MG A 403 O HOH A 746 1555 8545 2.01 SITE 1 AC1 7 GLU A 76 GLY A 79 LEU A 80 PHE A 83 SITE 2 AC1 7 LEU A 240 PHE A 244 HIS A 247 SITE 1 AC2 6 HOH A 566 HOH A 585 HOH A 608 HOH A 764 SITE 2 AC2 6 HOH A 809 HOH A 871 SITE 1 AC3 6 GLU A 71 HOH A 539 HOH A 565 HOH A 614 SITE 2 AC3 6 HOH A 718 HOH A 746 CRYST1 133.680 133.680 40.170 90.00 90.00 90.00 I 4 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007481 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007481 0.000000 0.00000 SCALE3 0.000000 0.000000 0.024894 0.00000