data_6IDO # _entry.id 6IDO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6IDO pdb_00006ido 10.2210/pdb6ido/pdb WWPDB D_1300008981 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6IDO _pdbx_database_status.recvd_initial_deposition_date 2018-09-10 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Lou, Y.C.' 1 ? 'Chien, C.Y.' 2 ? 'Chen, C.' 3 ? 'Hsu, C.H.' 4 0000-0002-0008-7383 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Proteins _citation.journal_id_ASTM PSFGEY _citation.journal_id_CSD 0867 _citation.journal_id_ISSN 1097-0134 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 88 _citation.language ? _citation.page_first 69 _citation.page_last 81 _citation.title 'Structural basis for -35 element recognition by sigma4chimera proteins and their interactions with PmrA response regulator.' _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1002/prot.25768 _citation.pdbx_database_id_PubMed 31293000 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lou, Y.C.' 1 ? primary 'Chou, C.C.' 2 ? primary 'Yeh, H.H.' 3 ? primary 'Chien, C.Y.' 4 ? primary 'Sadotra, S.' 5 ? primary 'Hsu, C.H.' 6 ? primary 'Chen, C.' 7 0000-0002-7164-0238 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 6IDO _cell.details ? _cell.formula_units_Z ? _cell.length_a 154.540 _cell.length_a_esd ? _cell.length_b 154.540 _cell.length_b_esd ? _cell.length_c 144.960 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 32 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6IDO _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'RNA polymerase sigma factor RpoS,RNA polymerase beta-flap-tip-helix' 12946.672 2 ? T79G ? ? 2 polymer syn ;DNA (5'-D(P*GP*AP*TP*TP*TP*GP*TP*CP*AP*AP*GP*TP*GP*GP*C)-3') ; 4640.019 2 ? ? ? ? 3 polymer syn ;DNA (5'-D(P*CP*CP*AP*CP*TP*TP*GP*AP*CP*AP*AP*AP*TP*CP*G)-3') ; 4867.181 2 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Sigma S,Sigma S' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GAMGGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRRLREILQGQ GLNIEALFREGSGSKGETQLTPEEKLLRAIFGEKA ; ;GAMGGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRRLREILQGQ GLNIEALFREGSGSKGETQLTPEEKLLRAIFGEKA ; A,B ? 2 polydeoxyribonucleotide no no '(DG)(DA)(DT)(DT)(DT)(DG)(DT)(DC)(DA)(DA)(DG)(DT)(DG)(DG)(DC)' GATTTGTCAAGTGGC C,E ? 3 polydeoxyribonucleotide no no '(DG)(DC)(DC)(DA)(DC)(DT)(DT)(DG)(DA)(DC)(DA)(DA)(DA)(DT)(DC)(DG)' GCCACTTGACAAATCG D,F ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 MET n 1 4 GLY n 1 5 GLY n 1 6 PRO n 1 7 GLU n 1 8 ASP n 1 9 THR n 1 10 THR n 1 11 GLN n 1 12 ASP n 1 13 ASP n 1 14 ASP n 1 15 MET n 1 16 LYS n 1 17 GLN n 1 18 SER n 1 19 ILE n 1 20 VAL n 1 21 LYS n 1 22 TRP n 1 23 LEU n 1 24 PHE n 1 25 GLU n 1 26 LEU n 1 27 ASN n 1 28 ALA n 1 29 LYS n 1 30 GLN n 1 31 ARG n 1 32 GLU n 1 33 VAL n 1 34 LEU n 1 35 ALA n 1 36 ARG n 1 37 ARG n 1 38 PHE n 1 39 GLY n 1 40 LEU n 1 41 LEU n 1 42 GLY n 1 43 TYR n 1 44 GLU n 1 45 ALA n 1 46 ALA n 1 47 THR n 1 48 LEU n 1 49 GLU n 1 50 ASP n 1 51 VAL n 1 52 GLY n 1 53 ARG n 1 54 GLU n 1 55 ILE n 1 56 GLY n 1 57 LEU n 1 58 THR n 1 59 ARG n 1 60 GLU n 1 61 ARG n 1 62 VAL n 1 63 ARG n 1 64 GLN n 1 65 ILE n 1 66 GLN n 1 67 VAL n 1 68 GLU n 1 69 GLY n 1 70 LEU n 1 71 ARG n 1 72 ARG n 1 73 LEU n 1 74 ARG n 1 75 GLU n 1 76 ILE n 1 77 LEU n 1 78 GLN n 1 79 GLY n 1 80 GLN n 1 81 GLY n 1 82 LEU n 1 83 ASN n 1 84 ILE n 1 85 GLU n 1 86 ALA n 1 87 LEU n 1 88 PHE n 1 89 ARG n 1 90 GLU n 1 91 GLY n 1 92 SER n 1 93 GLY n 1 94 SER n 1 95 LYS n 1 96 GLY n 1 97 GLU n 1 98 THR n 1 99 GLN n 1 100 LEU n 1 101 THR n 1 102 PRO n 1 103 GLU n 1 104 GLU n 1 105 LYS n 1 106 LEU n 1 107 LEU n 1 108 ARG n 1 109 ALA n 1 110 ILE n 1 111 PHE n 1 112 GLY n 1 113 GLU n 1 114 LYS n 1 115 ALA n 2 1 DG n 2 2 DA n 2 3 DT n 2 4 DT n 2 5 DT n 2 6 DG n 2 7 DT n 2 8 DC n 2 9 DA n 2 10 DA n 2 11 DG n 2 12 DT n 2 13 DG n 2 14 DG n 2 15 DC n 3 1 DG n 3 2 DC n 3 3 DC n 3 4 DA n 3 5 DC n 3 6 DT n 3 7 DT n 3 8 DG n 3 9 DA n 3 10 DC n 3 11 DA n 3 12 DA n 3 13 DA n 3 14 DT n 3 15 DC n 3 16 DG n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 94 ? ? rpoS ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 ? ? ? ? ? ? 'BL21(DE3)' ? ? ? ? ? ? ? ? ? ? ? ? ? ? 1 2 sample 'Biological sequence' 95 115 ? ? ? ? ? ? ? ? ? 'Klebsiella pneumoniae' 573 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 ? ? ? ? ? ? 'BL21(DE3)' ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 15 'Klebsiella pneumoniae' ? 573 ? 3 1 sample 1 16 'Klebsiella pneumoniae' ? 573 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP Q9F8R5_ECOLX Q9F8R5 ? 1 KQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE 256 2 PDB 6IDO 6IDO ? 1 ? 95 3 PDB 6IDO 6IDO ? 2 ? 1 4 PDB 6IDO 6IDO ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6IDO A 16 ? 90 ? Q9F8R5 256 ? 330 ? 16 90 2 2 6IDO A 95 ? 115 ? 6IDO 95 ? 115 ? 95 115 3 3 6IDO C 1 ? 15 ? 6IDO 1 ? 15 ? 1 15 4 4 6IDO D 1 ? 16 ? 6IDO 0 ? 15 ? 0 15 5 1 6IDO B 16 ? 90 ? Q9F8R5 256 ? 330 ? 16 90 6 2 6IDO B 95 ? 115 ? 6IDO 95 ? 115 ? 95 115 7 3 6IDO E 1 ? 15 ? 6IDO 1 ? 15 ? 1 15 8 4 6IDO F 1 ? 16 ? 6IDO 0 ? 15 ? 0 15 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6IDO GLY A 1 ? UNP Q9F8R5 ? ? 'expression tag' 1 1 1 6IDO ALA A 2 ? UNP Q9F8R5 ? ? 'expression tag' 2 2 1 6IDO MET A 3 ? UNP Q9F8R5 ? ? 'expression tag' 3 3 1 6IDO GLY A 4 ? UNP Q9F8R5 ? ? 'expression tag' 4 4 1 6IDO GLY A 5 ? UNP Q9F8R5 ? ? 'expression tag' 5 5 1 6IDO PRO A 6 ? UNP Q9F8R5 ? ? 'expression tag' 6 6 1 6IDO GLU A 7 ? UNP Q9F8R5 ? ? 'expression tag' 7 7 1 6IDO ASP A 8 ? UNP Q9F8R5 ? ? 'expression tag' 8 8 1 6IDO THR A 9 ? UNP Q9F8R5 ? ? 'expression tag' 9 9 1 6IDO THR A 10 ? UNP Q9F8R5 ? ? 'expression tag' 10 10 1 6IDO GLN A 11 ? UNP Q9F8R5 ? ? 'expression tag' 11 11 1 6IDO ASP A 12 ? UNP Q9F8R5 ? ? 'expression tag' 12 12 1 6IDO ASP A 13 ? UNP Q9F8R5 ? ? 'expression tag' 13 13 1 6IDO ASP A 14 ? UNP Q9F8R5 ? ? 'expression tag' 14 14 1 6IDO MET A 15 ? UNP Q9F8R5 ? ? 'expression tag' 15 15 1 6IDO GLY A 79 ? UNP Q9F8R5 THR 319 'engineered mutation' 79 16 1 6IDO GLY A 91 ? UNP Q9F8R5 ? ? linker 91 17 1 6IDO SER A 92 ? UNP Q9F8R5 ? ? linker 92 18 1 6IDO GLY A 93 ? UNP Q9F8R5 ? ? linker 93 19 1 6IDO SER A 94 ? UNP Q9F8R5 ? ? linker 94 20 5 6IDO GLY B 1 ? UNP Q9F8R5 ? ? 'expression tag' 1 21 5 6IDO ALA B 2 ? UNP Q9F8R5 ? ? 'expression tag' 2 22 5 6IDO MET B 3 ? UNP Q9F8R5 ? ? 'expression tag' 3 23 5 6IDO GLY B 4 ? UNP Q9F8R5 ? ? 'expression tag' 4 24 5 6IDO GLY B 5 ? UNP Q9F8R5 ? ? 'expression tag' 5 25 5 6IDO PRO B 6 ? UNP Q9F8R5 ? ? 'expression tag' 6 26 5 6IDO GLU B 7 ? UNP Q9F8R5 ? ? 'expression tag' 7 27 5 6IDO ASP B 8 ? UNP Q9F8R5 ? ? 'expression tag' 8 28 5 6IDO THR B 9 ? UNP Q9F8R5 ? ? 'expression tag' 9 29 5 6IDO THR B 10 ? UNP Q9F8R5 ? ? 'expression tag' 10 30 5 6IDO GLN B 11 ? UNP Q9F8R5 ? ? 'expression tag' 11 31 5 6IDO ASP B 12 ? UNP Q9F8R5 ? ? 'expression tag' 12 32 5 6IDO ASP B 13 ? UNP Q9F8R5 ? ? 'expression tag' 13 33 5 6IDO ASP B 14 ? UNP Q9F8R5 ? ? 'expression tag' 14 34 5 6IDO MET B 15 ? UNP Q9F8R5 ? ? 'expression tag' 15 35 5 6IDO GLY B 79 ? UNP Q9F8R5 THR 319 'engineered mutation' 79 36 5 6IDO GLY B 91 ? UNP Q9F8R5 ? ? linker 91 37 5 6IDO SER B 92 ? UNP Q9F8R5 ? ? linker 92 38 5 6IDO GLY B 93 ? UNP Q9F8R5 ? ? linker 93 39 5 6IDO SER B 94 ? UNP Q9F8R5 ? ? linker 94 40 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6IDO _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 4.90 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 74.91 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2 M Ammonium sulfate, 0.1 M Sodium acetate trihydrate (pH 4.6), and 25% w/v Polyethylene glycol 4,000.' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RAYONIX MX300-HS' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-10-03 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.99984 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'NSRRC BEAMLINE TPS 05A' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.99984 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 'TPS 05A' _diffrn_source.pdbx_synchrotron_site NSRRC # _reflns.B_iso_Wilson_estimate 55.60 _reflns.entry_id 6IDO _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 3.748 _reflns.d_resolution_low 29.616 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 13130 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 7.200 _reflns.pdbx_Rmerge_I_obs 0.046 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 42.9090 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 3.748 _reflns_shell.d_res_low 3.88 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 4.333 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 871 _reflns_shell.percent_possible_all 100 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.518 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 7.4 _reflns_shell.pdbx_Rsym_value 0.518 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6IDO _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.748 _refine.ls_d_res_low 29.616 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 13125 _refine.ls_number_reflns_R_free 1314 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.9 _refine.ls_percent_reflns_R_free 10.01 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2256 _refine.ls_R_factor_R_free 0.2525 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2226 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.38 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 5IPL _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 24.06 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.34 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1340 _refine_hist.pdbx_number_atoms_nucleic_acid 1230 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2570 _refine_hist.d_res_high 3.748 _refine_hist.d_res_low 29.616 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.004 ? 2726 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.676 ? 3919 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 20.892 ? 1423 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.036 ? 447 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.003 ? 292 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 3.7481 3.8979 . . 107 871 52.00 . . . 0.2637 . 0.2733 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.8979 4.0749 . . 94 923 53.00 . . . 0.3246 . 0.2472 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.0749 4.2891 . . 108 897 53.00 . . . 0.3021 . 0.2590 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.2891 4.5569 . . 96 938 53.00 . . . 0.3151 . 0.2370 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.5569 4.9073 . . 148 1307 77.00 . . . 0.2494 . 0.2285 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.9073 5.3985 . . 186 1715 100.00 . . . 0.2646 . 0.2152 . . . . . . . . . . 'X-RAY DIFFRACTION' 5.3985 6.1735 . . 187 1727 100.00 . . . 0.2448 . 0.2118 . . . . . . . . . . 'X-RAY DIFFRACTION' 6.1735 7.7548 . . 194 1719 100.00 . . . 0.1984 . 0.2078 . . . . . . . . . . 'X-RAY DIFFRACTION' 7.7548 29.6169 . . 194 1714 99.00 . . . 0.2279 . 0.2008 . . . . . . . . . . # _struct.entry_id 6IDO _struct.title ;Crystal structure of Klebsiella pneumoniae sigma4 of sigmaS fusing with the RNA polymerase beta-flap-tip-helix in complex with -35 element DNA ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6IDO _struct_keywords.text 'sigma4, sigmaS, -35 element DNA, TRANSCRIPTION' _struct_keywords.pdbx_keywords TRANSCRIPTION # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 1 ? E N N 2 ? F N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 18 ? LEU A 23 ? SER A 18 LEU A 23 1 ? 6 HELX_P HELX_P2 AA2 PHE A 24 ? LEU A 26 ? PHE A 24 LEU A 26 5 ? 3 HELX_P HELX_P3 AA3 ASN A 27 ? GLY A 39 ? ASN A 27 GLY A 39 1 ? 13 HELX_P HELX_P4 AA4 THR A 47 ? GLY A 56 ? THR A 47 GLY A 56 1 ? 10 HELX_P HELX_P5 AA5 THR A 58 ? LEU A 77 ? THR A 58 LEU A 77 1 ? 20 HELX_P HELX_P6 AA6 THR A 101 ? PHE A 111 ? THR A 101 PHE A 111 1 ? 11 HELX_P HELX_P7 AA7 SER D 18 ? PHE D 24 ? SER B 18 PHE B 24 5 ? 7 HELX_P HELX_P8 AA8 ASN D 27 ? GLY D 39 ? ASN B 27 GLY B 39 1 ? 13 HELX_P HELX_P9 AA9 THR D 47 ? GLY D 56 ? THR B 47 GLY B 56 1 ? 10 HELX_P HELX_P10 AB1 THR D 58 ? LEU D 77 ? THR B 58 LEU B 77 1 ? 20 HELX_P HELX_P11 AB2 THR D 101 ? PHE D 111 ? THR B 101 PHE B 111 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? B DG 1 N1 ? ? ? 1_555 C DC 15 N3 ? ? C DG 1 D DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DG 1 N2 ? ? ? 1_555 C DC 15 O2 ? ? C DG 1 D DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 1 O6 ? ? ? 1_555 C DC 15 N4 ? ? C DG 1 D DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DA 2 N1 ? ? ? 1_555 C DT 14 N3 ? ? C DA 2 D DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DA 2 N6 ? ? ? 1_555 C DT 14 O4 ? ? C DA 2 D DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DT 3 N3 ? ? ? 1_555 C DA 13 N1 ? ? C DT 3 D DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DT 3 O4 ? ? ? 1_555 C DA 13 N6 ? ? C DT 3 D DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DT 4 O4 ? ? ? 1_555 C DA 11 N6 ? ? C DT 4 D DA 10 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog9 hydrog ? ? B DT 4 N3 ? ? ? 1_555 C DA 12 N1 ? ? C DT 4 D DA 11 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog10 hydrog ? ? B DT 5 N3 ? ? ? 1_555 C DA 11 N1 ? ? C DT 5 D DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DT 5 O4 ? ? ? 1_555 C DA 11 N6 ? ? C DT 5 D DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DG 6 N1 ? ? ? 1_555 C DC 10 N3 ? ? C DG 6 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DG 6 N2 ? ? ? 1_555 C DC 10 O2 ? ? C DG 6 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DG 6 O6 ? ? ? 1_555 C DC 10 N4 ? ? C DG 6 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DT 7 N3 ? ? ? 1_555 C DA 9 N1 ? ? C DT 7 D DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DT 7 O4 ? ? ? 1_555 C DA 9 N6 ? ? C DT 7 D DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DC 8 N3 ? ? ? 1_555 C DG 8 N1 ? ? C DC 8 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DC 8 N4 ? ? ? 1_555 C DG 8 O6 ? ? C DC 8 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DC 8 O2 ? ? ? 1_555 C DG 8 N2 ? ? C DC 8 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DA 9 N1 ? ? ? 1_555 C DT 7 N3 ? ? C DA 9 D DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DA 9 N6 ? ? ? 1_555 C DT 7 O4 ? ? C DA 9 D DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DA 10 N1 ? ? ? 1_555 C DT 6 N3 ? ? C DA 10 D DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DA 10 N6 ? ? ? 1_555 C DT 6 O4 ? ? C DA 10 D DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DG 11 N1 ? ? ? 1_555 C DC 5 N3 ? ? C DG 11 D DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DG 11 N2 ? ? ? 1_555 C DC 5 O2 ? ? C DG 11 D DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DG 11 O6 ? ? ? 1_555 C DC 5 N4 ? ? C DG 11 D DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DT 12 N3 ? ? ? 1_555 C DA 4 N1 ? ? C DT 12 D DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DT 12 O4 ? ? ? 1_555 C DA 4 N6 ? ? C DT 12 D DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DG 13 N1 ? ? ? 1_555 C DC 3 O2 ? ? C DG 13 D DC 2 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog30 hydrog ? ? B DG 13 N2 ? ? ? 1_555 C DC 3 N3 ? ? C DG 13 D DC 2 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog31 hydrog ? ? B DG 14 N1 ? ? ? 1_555 C DC 2 N3 ? ? C DG 14 D DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B DG 14 N2 ? ? ? 1_555 C DC 2 O2 ? ? C DG 14 D DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B DG 14 O6 ? ? ? 1_555 C DC 2 N4 ? ? C DG 14 D DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? E DG 1 N1 ? ? ? 1_555 F DC 15 N3 ? ? E DG 1 F DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? E DG 1 N2 ? ? ? 1_555 F DC 15 O2 ? ? E DG 1 F DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? E DG 1 O6 ? ? ? 1_555 F DC 15 N4 ? ? E DG 1 F DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? E DA 2 N1 ? ? ? 1_555 F DT 14 N3 ? ? E DA 2 F DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? E DA 2 N6 ? ? ? 1_555 F DT 14 O4 ? ? E DA 2 F DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? E DT 3 N3 ? ? ? 1_555 F DA 13 N1 ? ? E DT 3 F DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? E DT 3 O4 ? ? ? 1_555 F DA 13 N6 ? ? E DT 3 F DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? E DT 4 N3 ? ? ? 1_555 F DA 12 N1 ? ? E DT 4 F DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? E DT 4 O4 ? ? ? 1_555 F DA 12 N6 ? ? E DT 4 F DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? E DT 5 N3 ? ? ? 1_555 F DA 11 N1 ? ? E DT 5 F DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? E DT 5 O4 ? ? ? 1_555 F DA 11 N6 ? ? E DT 5 F DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? E DG 6 N1 ? ? ? 1_555 F DA 9 N1 ? ? E DG 6 F DA 8 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog46 hydrog ? ? E DG 6 O6 ? ? ? 1_555 F DA 9 N6 ? ? E DG 6 F DA 8 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog47 hydrog ? ? E DT 7 N3 ? ? ? 1_555 F DG 8 O6 ? ? E DT 7 F DG 7 1_555 ? ? ? ? ? ? 'DT-DG MISPAIR' ? ? ? hydrog48 hydrog ? ? E DT 7 N3 ? ? ? 1_555 F DA 9 N1 ? ? E DT 7 F DA 8 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog49 hydrog ? ? E DC 8 N3 ? ? ? 1_555 F DG 8 N1 ? ? E DC 8 F DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? E DC 8 N4 ? ? ? 1_555 F DG 8 O6 ? ? E DC 8 F DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? E DC 8 O2 ? ? ? 1_555 F DG 8 N2 ? ? E DC 8 F DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? E DA 9 N1 ? ? ? 1_555 F DT 7 N3 ? ? E DA 9 F DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? E DA 9 N6 ? ? ? 1_555 F DT 7 O4 ? ? E DA 9 F DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? E DA 10 N1 ? ? ? 1_555 F DT 6 N3 ? ? E DA 10 F DT 5 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog55 hydrog ? ? E DG 11 N1 ? ? ? 1_555 F DC 5 N3 ? ? E DG 11 F DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? E DG 11 N2 ? ? ? 1_555 F DC 5 O2 ? ? E DG 11 F DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? E DG 11 O6 ? ? ? 1_555 F DC 5 N4 ? ? E DG 11 F DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? E DT 12 N3 ? ? ? 1_555 F DA 4 N1 ? ? E DT 12 F DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? E DT 12 O4 ? ? ? 1_555 F DA 4 N6 ? ? E DT 12 F DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? E DG 13 N1 ? ? ? 1_555 F DC 3 N3 ? ? E DG 13 F DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? E DG 13 N2 ? ? ? 1_555 F DC 3 O2 ? ? E DG 13 F DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? E DG 13 O6 ? ? ? 1_555 F DC 3 N4 ? ? E DG 13 F DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? E DG 14 O6 ? ? ? 1_555 F DC 2 N4 ? ? E DG 14 F DC 1 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog64 hydrog ? ? E DG 14 N2 ? ? ? 1_555 F DC 3 O2 ? ? E DG 14 F DC 2 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 6IDO _atom_sites.fract_transf_matrix[1][1] 0.006471 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.006471 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006898 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 ? ? ? A . n A 1 2 ALA 2 2 ? ? ? A . n A 1 3 MET 3 3 ? ? ? A . n A 1 4 GLY 4 4 ? ? ? A . n A 1 5 GLY 5 5 ? ? ? A . n A 1 6 PRO 6 6 ? ? ? A . n A 1 7 GLU 7 7 ? ? ? A . n A 1 8 ASP 8 8 ? ? ? A . n A 1 9 THR 9 9 ? ? ? A . n A 1 10 THR 10 10 ? ? ? A . n A 1 11 GLN 11 11 ? ? ? A . n A 1 12 ASP 12 12 ? ? ? A . n A 1 13 ASP 13 13 ? ? ? A . n A 1 14 ASP 14 14 ? ? ? A . n A 1 15 MET 15 15 ? ? ? A . n A 1 16 LYS 16 16 16 LYS LYS A . n A 1 17 GLN 17 17 17 GLN GLN A . n A 1 18 SER 18 18 18 SER SER A . n A 1 19 ILE 19 19 19 ILE ILE A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 LYS 21 21 21 LYS LYS A . n A 1 22 TRP 22 22 22 TRP TRP A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 PHE 24 24 24 PHE PHE A . n A 1 25 GLU 25 25 25 GLU GLU A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 ASN 27 27 27 ASN ASN A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 LYS 29 29 29 LYS LYS A . n A 1 30 GLN 30 30 30 GLN GLN A . n A 1 31 ARG 31 31 31 ARG ARG A . n A 1 32 GLU 32 32 32 GLU GLU A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 ALA 35 35 35 ALA ALA A . n A 1 36 ARG 36 36 36 ARG ARG A . n A 1 37 ARG 37 37 37 ARG ARG A . n A 1 38 PHE 38 38 38 PHE PHE A . n A 1 39 GLY 39 39 39 GLY GLY A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 LEU 41 41 41 LEU LEU A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 TYR 43 43 43 TYR TYR A . n A 1 44 GLU 44 44 44 GLU GLU A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 ALA 46 46 46 ALA ALA A . n A 1 47 THR 47 47 47 THR THR A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 GLU 49 49 49 GLU GLU A . n A 1 50 ASP 50 50 50 ASP ASP A . n A 1 51 VAL 51 51 51 VAL VAL A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 ARG 53 53 53 ARG ARG A . n A 1 54 GLU 54 54 54 GLU GLU A . n A 1 55 ILE 55 55 55 ILE ILE A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 THR 58 58 58 THR THR A . n A 1 59 ARG 59 59 59 ARG ARG A . n A 1 60 GLU 60 60 60 GLU GLU A . n A 1 61 ARG 61 61 61 ARG ARG A . n A 1 62 VAL 62 62 62 VAL VAL A . n A 1 63 ARG 63 63 63 ARG ARG A . n A 1 64 GLN 64 64 64 GLN GLN A . n A 1 65 ILE 65 65 65 ILE ILE A . n A 1 66 GLN 66 66 66 GLN GLN A . n A 1 67 VAL 67 67 67 VAL VAL A . n A 1 68 GLU 68 68 68 GLU GLU A . n A 1 69 GLY 69 69 69 GLY GLY A . n A 1 70 LEU 70 70 70 LEU LEU A . n A 1 71 ARG 71 71 71 ARG ARG A . n A 1 72 ARG 72 72 72 ARG ARG A . n A 1 73 LEU 73 73 73 LEU LEU A . n A 1 74 ARG 74 74 74 ARG ARG A . n A 1 75 GLU 75 75 75 GLU GLU A . n A 1 76 ILE 76 76 76 ILE ILE A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 GLN 78 78 78 GLN GLN A . n A 1 79 GLY 79 79 79 GLY GLY A . n A 1 80 GLN 80 80 80 GLN GLN A . n A 1 81 GLY 81 81 81 GLY GLY A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 ASN 83 83 83 ASN ASN A . n A 1 84 ILE 84 84 84 ILE ILE A . n A 1 85 GLU 85 85 85 GLU GLU A . n A 1 86 ALA 86 86 86 ALA ALA A . n A 1 87 LEU 87 87 87 LEU LEU A . n A 1 88 PHE 88 88 ? ? ? A . n A 1 89 ARG 89 89 ? ? ? A . n A 1 90 GLU 90 90 ? ? ? A . n A 1 91 GLY 91 91 ? ? ? A . n A 1 92 SER 92 92 ? ? ? A . n A 1 93 GLY 93 93 ? ? ? A . n A 1 94 SER 94 94 ? ? ? A . n A 1 95 LYS 95 95 ? ? ? A . n A 1 96 GLY 96 96 ? ? ? A . n A 1 97 GLU 97 97 ? ? ? A . n A 1 98 THR 98 98 98 THR THR A . n A 1 99 GLN 99 99 99 GLN GLN A . n A 1 100 LEU 100 100 100 LEU LEU A . n A 1 101 THR 101 101 101 THR THR A . n A 1 102 PRO 102 102 102 PRO PRO A . n A 1 103 GLU 103 103 103 GLU GLU A . n A 1 104 GLU 104 104 104 GLU GLU A . n A 1 105 LYS 105 105 105 LYS LYS A . n A 1 106 LEU 106 106 106 LEU LEU A . n A 1 107 LEU 107 107 107 LEU LEU A . n A 1 108 ARG 108 108 108 ARG ARG A . n A 1 109 ALA 109 109 109 ALA ALA A . n A 1 110 ILE 110 110 110 ILE ILE A . n A 1 111 PHE 111 111 111 PHE PHE A . n A 1 112 GLY 112 112 ? ? ? A . n A 1 113 GLU 113 113 ? ? ? A . n A 1 114 LYS 114 114 ? ? ? A . n A 1 115 ALA 115 115 ? ? ? A . n B 2 1 DG 1 1 1 DG DG C . n B 2 2 DA 2 2 2 DA DA C . n B 2 3 DT 3 3 3 DT DT C . n B 2 4 DT 4 4 4 DT DT C . n B 2 5 DT 5 5 5 DT DT C . n B 2 6 DG 6 6 6 DG DG C . n B 2 7 DT 7 7 7 DT DT C . n B 2 8 DC 8 8 8 DC DC C . n B 2 9 DA 9 9 9 DA DA C . n B 2 10 DA 10 10 10 DA DA C . n B 2 11 DG 11 11 11 DG DG C . n B 2 12 DT 12 12 12 DT DT C . n B 2 13 DG 13 13 13 DG DG C . n B 2 14 DG 14 14 14 DG DG C . n B 2 15 DC 15 15 15 DC DC C . n C 3 1 DG 1 0 ? ? ? D . n C 3 2 DC 2 1 1 DC DC D . n C 3 3 DC 3 2 2 DC DC D . n C 3 4 DA 4 3 3 DA DA D . n C 3 5 DC 5 4 4 DC DC D . n C 3 6 DT 6 5 5 DT DT D . n C 3 7 DT 7 6 6 DT DT D . n C 3 8 DG 8 7 7 DG DG D . n C 3 9 DA 9 8 8 DA DA D . n C 3 10 DC 10 9 9 DC DC D . n C 3 11 DA 11 10 10 DA DA D . n C 3 12 DA 12 11 11 DA DA D . n C 3 13 DA 13 12 12 DA DA D . n C 3 14 DT 14 13 13 DT DT D . n C 3 15 DC 15 14 14 DC DC D . n C 3 16 DG 16 15 15 DG DG D . n D 1 1 GLY 1 1 ? ? ? B . n D 1 2 ALA 2 2 ? ? ? B . n D 1 3 MET 3 3 ? ? ? B . n D 1 4 GLY 4 4 ? ? ? B . n D 1 5 GLY 5 5 ? ? ? B . n D 1 6 PRO 6 6 ? ? ? B . n D 1 7 GLU 7 7 ? ? ? B . n D 1 8 ASP 8 8 ? ? ? B . n D 1 9 THR 9 9 ? ? ? B . n D 1 10 THR 10 10 ? ? ? B . n D 1 11 GLN 11 11 ? ? ? B . n D 1 12 ASP 12 12 ? ? ? B . n D 1 13 ASP 13 13 ? ? ? B . n D 1 14 ASP 14 14 ? ? ? B . n D 1 15 MET 15 15 ? ? ? B . n D 1 16 LYS 16 16 ? ? ? B . n D 1 17 GLN 17 17 17 GLN GLN B . n D 1 18 SER 18 18 18 SER SER B . n D 1 19 ILE 19 19 19 ILE ILE B . n D 1 20 VAL 20 20 20 VAL VAL B . n D 1 21 LYS 21 21 21 LYS LYS B . n D 1 22 TRP 22 22 22 TRP TRP B . n D 1 23 LEU 23 23 23 LEU LEU B . n D 1 24 PHE 24 24 24 PHE PHE B . n D 1 25 GLU 25 25 25 GLU GLU B . n D 1 26 LEU 26 26 26 LEU LEU B . n D 1 27 ASN 27 27 27 ASN ASN B . n D 1 28 ALA 28 28 28 ALA ALA B . n D 1 29 LYS 29 29 29 LYS LYS B . n D 1 30 GLN 30 30 30 GLN GLN B . n D 1 31 ARG 31 31 31 ARG ARG B . n D 1 32 GLU 32 32 32 GLU GLU B . n D 1 33 VAL 33 33 33 VAL VAL B . n D 1 34 LEU 34 34 34 LEU LEU B . n D 1 35 ALA 35 35 35 ALA ALA B . n D 1 36 ARG 36 36 36 ARG ARG B . n D 1 37 ARG 37 37 37 ARG ARG B . n D 1 38 PHE 38 38 38 PHE PHE B . n D 1 39 GLY 39 39 39 GLY GLY B . n D 1 40 LEU 40 40 40 LEU LEU B . n D 1 41 LEU 41 41 41 LEU LEU B . n D 1 42 GLY 42 42 42 GLY GLY B . n D 1 43 TYR 43 43 43 TYR TYR B . n D 1 44 GLU 44 44 44 GLU GLU B . n D 1 45 ALA 45 45 45 ALA ALA B . n D 1 46 ALA 46 46 46 ALA ALA B . n D 1 47 THR 47 47 47 THR THR B . n D 1 48 LEU 48 48 48 LEU LEU B . n D 1 49 GLU 49 49 49 GLU GLU B . n D 1 50 ASP 50 50 50 ASP ASP B . n D 1 51 VAL 51 51 51 VAL VAL B . n D 1 52 GLY 52 52 52 GLY GLY B . n D 1 53 ARG 53 53 53 ARG ARG B . n D 1 54 GLU 54 54 54 GLU GLU B . n D 1 55 ILE 55 55 55 ILE ILE B . n D 1 56 GLY 56 56 56 GLY GLY B . n D 1 57 LEU 57 57 57 LEU LEU B . n D 1 58 THR 58 58 58 THR THR B . n D 1 59 ARG 59 59 59 ARG ARG B . n D 1 60 GLU 60 60 60 GLU GLU B . n D 1 61 ARG 61 61 61 ARG ARG B . n D 1 62 VAL 62 62 62 VAL VAL B . n D 1 63 ARG 63 63 63 ARG ARG B . n D 1 64 GLN 64 64 64 GLN GLN B . n D 1 65 ILE 65 65 65 ILE ILE B . n D 1 66 GLN 66 66 66 GLN GLN B . n D 1 67 VAL 67 67 67 VAL VAL B . n D 1 68 GLU 68 68 68 GLU GLU B . n D 1 69 GLY 69 69 69 GLY GLY B . n D 1 70 LEU 70 70 70 LEU LEU B . n D 1 71 ARG 71 71 71 ARG ARG B . n D 1 72 ARG 72 72 72 ARG ARG B . n D 1 73 LEU 73 73 73 LEU LEU B . n D 1 74 ARG 74 74 74 ARG ARG B . n D 1 75 GLU 75 75 75 GLU GLU B . n D 1 76 ILE 76 76 76 ILE ILE B . n D 1 77 LEU 77 77 77 LEU LEU B . n D 1 78 GLN 78 78 78 GLN GLN B . n D 1 79 GLY 79 79 79 GLY GLY B . n D 1 80 GLN 80 80 ? ? ? B . n D 1 81 GLY 81 81 ? ? ? B . n D 1 82 LEU 82 82 ? ? ? B . n D 1 83 ASN 83 83 ? ? ? B . n D 1 84 ILE 84 84 ? ? ? B . n D 1 85 GLU 85 85 ? ? ? B . n D 1 86 ALA 86 86 ? ? ? B . n D 1 87 LEU 87 87 ? ? ? B . n D 1 88 PHE 88 88 ? ? ? B . n D 1 89 ARG 89 89 ? ? ? B . n D 1 90 GLU 90 90 ? ? ? B . n D 1 91 GLY 91 91 ? ? ? B . n D 1 92 SER 92 92 ? ? ? B . n D 1 93 GLY 93 93 ? ? ? B . n D 1 94 SER 94 94 ? ? ? B . n D 1 95 LYS 95 95 ? ? ? B . n D 1 96 GLY 96 96 ? ? ? B . n D 1 97 GLU 97 97 ? ? ? B . n D 1 98 THR 98 98 98 THR THR B . n D 1 99 GLN 99 99 99 GLN GLN B . n D 1 100 LEU 100 100 100 LEU LEU B . n D 1 101 THR 101 101 101 THR THR B . n D 1 102 PRO 102 102 102 PRO PRO B . n D 1 103 GLU 103 103 103 GLU GLU B . n D 1 104 GLU 104 104 104 GLU GLU B . n D 1 105 LYS 105 105 105 LYS LYS B . n D 1 106 LEU 106 106 106 LEU LEU B . n D 1 107 LEU 107 107 107 LEU LEU B . n D 1 108 ARG 108 108 108 ARG ARG B . n D 1 109 ALA 109 109 109 ALA ALA B . n D 1 110 ILE 110 110 110 ILE ILE B . n D 1 111 PHE 111 111 111 PHE PHE B . n D 1 112 GLY 112 112 ? ? ? B . n D 1 113 GLU 113 113 ? ? ? B . n D 1 114 LYS 114 114 ? ? ? B . n D 1 115 ALA 115 115 ? ? ? B . n E 2 1 DG 1 1 1 DG DG E . n E 2 2 DA 2 2 2 DA DA E . n E 2 3 DT 3 3 3 DT DT E . n E 2 4 DT 4 4 4 DT DT E . n E 2 5 DT 5 5 5 DT DT E . n E 2 6 DG 6 6 6 DG DG E . n E 2 7 DT 7 7 7 DT DT E . n E 2 8 DC 8 8 8 DC DC E . n E 2 9 DA 9 9 9 DA DA E . n E 2 10 DA 10 10 10 DA DA E . n E 2 11 DG 11 11 11 DG DG E . n E 2 12 DT 12 12 12 DT DT E . n E 2 13 DG 13 13 13 DG DG E . n E 2 14 DG 14 14 14 DG DG E . n E 2 15 DC 15 15 15 DC DC E . n F 3 1 DG 1 0 ? ? ? F . n F 3 2 DC 2 1 1 DC DC F . n F 3 3 DC 3 2 2 DC DC F . n F 3 4 DA 4 3 3 DA DA F . n F 3 5 DC 5 4 4 DC DC F . n F 3 6 DT 6 5 5 DT DT F . n F 3 7 DT 7 6 6 DT DT F . n F 3 8 DG 8 7 7 DG DG F . n F 3 9 DA 9 8 8 DA DA F . n F 3 10 DC 10 9 9 DC DC F . n F 3 11 DA 11 10 10 DA DA F . n F 3 12 DA 12 11 11 DA DA F . n F 3 13 DA 13 12 12 DA DA F . n F 3 14 DT 14 13 13 DT DT F . n F 3 15 DC 15 14 14 DC DC F . n F 3 16 DG 16 15 15 DG DG F . n # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA trimeric 3 2 author_and_software_defined_assembly PISA trimeric 3 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C 2 1 D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2560 ? 1 MORE -17 ? 1 'SSA (A^2)' 10500 ? 2 'ABSA (A^2)' 2550 ? 2 MORE -15 ? 2 'SSA (A^2)' 10010 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-09-11 2 'Structure model' 1 1 2020-03-25 3 'Structure model' 1 2 2023-11-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 6 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.journal_volume' 7 2 'Structure model' '_citation.page_first' 8 2 'Structure model' '_citation.page_last' 9 2 'Structure model' '_citation.pdbx_database_id_DOI' 10 2 'Structure model' '_citation.pdbx_database_id_PubMed' 11 2 'Structure model' '_citation.title' 12 2 'Structure model' '_citation.year' 13 2 'Structure model' '_citation_author.identifier_ORCID' 14 3 'Structure model' '_database_2.pdbx_DOI' 15 3 'Structure model' '_database_2.pdbx_database_accession' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 30.1722 -15.0215 -22.0917 0.2043 0.2484 0.3876 0.2648 0.0711 0.3241 0.0141 0.0391 0.0112 0.0164 0.0009 -0.0133 -0.0148 -0.0364 0.0643 0.1173 0.0876 -0.0478 -0.0277 -0.0668 -0.0018 'X-RAY DIFFRACTION' 2 ? refined 21.9198 -17.6081 -28.6515 0.0930 0.6549 0.2257 0.0577 0.5532 0.3646 0.0028 0.0239 0.0062 0.0124 -0.0028 0.0125 0.0091 0.0434 0.0368 0.0977 0.0089 0.0183 -0.0286 -0.1497 -0.0008 'X-RAY DIFFRACTION' 3 ? refined 30.8703 -2.2725 -24.1614 0.4985 0.1884 0.6689 0.1261 0.1471 0.1582 0.0037 0.0027 0.0485 0.0059 0.0107 0.0049 -0.0995 0.0366 -0.0201 0.0682 -0.1466 -0.0465 -0.1656 0.0417 -0.0312 'X-RAY DIFFRACTION' 4 ? refined 16.5879 -21.6914 -40.6998 -0.4445 0.8225 -0.0518 0.2493 0.6086 0.1587 0.0023 0.0188 0.0269 0.0278 -0.0012 -0.0179 0.1621 0.1504 0.0471 -0.0864 0.0891 0.1391 0.1246 -0.1226 0.1940 'X-RAY DIFFRACTION' 5 ? refined 19.0569 -18.9357 -41.0461 -0.2204 0.9743 0.3543 0.0455 0.4618 0.2140 0.1742 0.1323 0.0168 0.0748 0.0415 -0.0335 0.2115 -0.0471 0.1757 -0.0857 -0.1917 -0.0392 0.1576 -0.3889 0.0060 'X-RAY DIFFRACTION' 6 ? refined 30.8902 -17.6003 -9.6762 0.7521 0.7708 0.5487 0.0646 0.3268 0.1435 0.0044 0.0039 0.0011 0.0009 0.0008 -0.0012 -0.0483 -0.0192 0.0201 0.0036 -0.0050 -0.0308 0.0070 -0.1349 -0.0001 'X-RAY DIFFRACTION' 7 ? refined 42.5136 -17.9683 -13.2463 0.4258 -0.0396 0.1073 0.2444 0.1126 0.0285 0.0148 0.0705 0.0063 0.0317 0.0078 0.0177 0.0349 0.0491 0.0095 0.0516 0.0248 0.0139 0.0269 -0.0064 0.0467 'X-RAY DIFFRACTION' 8 ? refined 47.9060 -20.6325 -17.9569 0.4884 0.2108 0.3825 0.2284 0.1027 -0.0555 0.0010 0.0485 0.0536 -0.0042 0.0005 -0.0480 0.0849 0.0144 0.0434 0.0347 0.1285 -0.1209 0.0140 -0.0369 0.0942 'X-RAY DIFFRACTION' 9 ? refined 40.6968 -23.1932 -5.6553 0.7278 0.0882 0.1948 0.2574 0.1124 -0.2752 0.0591 0.1502 0.1980 -0.0855 0.1037 -0.1634 0.0933 -0.1485 0.0940 0.1952 0.2594 0.0157 0.0406 -0.1498 0.3044 'X-RAY DIFFRACTION' 10 ? refined 60.5682 -20.4592 -7.1398 0.6770 -0.0454 0.2734 0.2113 -0.4296 -0.9316 0.0178 0.0879 0.1543 0.0576 -0.0684 -0.0895 0.1951 -0.0463 0.0821 0.2324 0.0720 -0.2211 -0.0684 0.2433 0.2322 'X-RAY DIFFRACTION' 11 ? refined 58.7171 -23.4228 -6.9873 0.6791 0.1453 0.3817 0.3226 -0.2748 -0.7979 0.1594 0.2514 0.1632 0.1593 -0.1074 -0.0237 0.2785 -0.1525 0.2260 0.0385 0.1258 -0.2514 0.0340 0.2057 0.3961 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 16 through 47 ) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 48 through 77 ) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 78 through 111 ) ; 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? ;chain 'C' and (resid 1 through 15 ) ; 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? ;chain 'D' and (resid 1 through 15 ) ; 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 17 through 27 ) ; 'X-RAY DIFFRACTION' 7 7 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 28 through 38 ) ; 'X-RAY DIFFRACTION' 8 8 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 39 through 58 ) ; 'X-RAY DIFFRACTION' 9 9 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 59 through 111 ) ; 'X-RAY DIFFRACTION' 10 10 ? ? ? ? ? ? ? ? ? ;chain 'E' and (resid 1 through 15 ) ; 'X-RAY DIFFRACTION' 11 11 ? ? ? ? ? ? ? ? ? ;chain 'F' and (resid 1 through 15 ) ; # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.13_2998: ???)' 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 3 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? . 4 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 82 ? ? 49.84 73.34 2 1 PHE B 24 ? ? -51.98 -71.63 3 1 GLU B 25 ? ? -76.70 28.70 4 1 LEU B 100 ? ? -168.20 87.16 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 1 ? A GLY 1 2 1 Y 1 A ALA 2 ? A ALA 2 3 1 Y 1 A MET 3 ? A MET 3 4 1 Y 1 A GLY 4 ? A GLY 4 5 1 Y 1 A GLY 5 ? A GLY 5 6 1 Y 1 A PRO 6 ? A PRO 6 7 1 Y 1 A GLU 7 ? A GLU 7 8 1 Y 1 A ASP 8 ? A ASP 8 9 1 Y 1 A THR 9 ? A THR 9 10 1 Y 1 A THR 10 ? A THR 10 11 1 Y 1 A GLN 11 ? A GLN 11 12 1 Y 1 A ASP 12 ? A ASP 12 13 1 Y 1 A ASP 13 ? A ASP 13 14 1 Y 1 A ASP 14 ? A ASP 14 15 1 Y 1 A MET 15 ? A MET 15 16 1 Y 1 A PHE 88 ? A PHE 88 17 1 Y 1 A ARG 89 ? A ARG 89 18 1 Y 1 A GLU 90 ? A GLU 90 19 1 Y 1 A GLY 91 ? A GLY 91 20 1 Y 1 A SER 92 ? A SER 92 21 1 Y 1 A GLY 93 ? A GLY 93 22 1 Y 1 A SER 94 ? A SER 94 23 1 Y 1 A LYS 95 ? A LYS 95 24 1 Y 1 A GLY 96 ? A GLY 96 25 1 Y 1 A GLU 97 ? A GLU 97 26 1 Y 1 A GLY 112 ? A GLY 112 27 1 Y 1 A GLU 113 ? A GLU 113 28 1 Y 1 A LYS 114 ? A LYS 114 29 1 Y 1 A ALA 115 ? A ALA 115 30 1 Y 1 D DG 0 ? C DG 1 31 1 Y 1 B GLY 1 ? D GLY 1 32 1 Y 1 B ALA 2 ? D ALA 2 33 1 Y 1 B MET 3 ? D MET 3 34 1 Y 1 B GLY 4 ? D GLY 4 35 1 Y 1 B GLY 5 ? D GLY 5 36 1 Y 1 B PRO 6 ? D PRO 6 37 1 Y 1 B GLU 7 ? D GLU 7 38 1 Y 1 B ASP 8 ? D ASP 8 39 1 Y 1 B THR 9 ? D THR 9 40 1 Y 1 B THR 10 ? D THR 10 41 1 Y 1 B GLN 11 ? D GLN 11 42 1 Y 1 B ASP 12 ? D ASP 12 43 1 Y 1 B ASP 13 ? D ASP 13 44 1 Y 1 B ASP 14 ? D ASP 14 45 1 Y 1 B MET 15 ? D MET 15 46 1 Y 1 B LYS 16 ? D LYS 16 47 1 Y 1 B GLN 80 ? D GLN 80 48 1 Y 1 B GLY 81 ? D GLY 81 49 1 Y 1 B LEU 82 ? D LEU 82 50 1 Y 1 B ASN 83 ? D ASN 83 51 1 Y 1 B ILE 84 ? D ILE 84 52 1 Y 1 B GLU 85 ? D GLU 85 53 1 Y 1 B ALA 86 ? D ALA 86 54 1 Y 1 B LEU 87 ? D LEU 87 55 1 Y 1 B PHE 88 ? D PHE 88 56 1 Y 1 B ARG 89 ? D ARG 89 57 1 Y 1 B GLU 90 ? D GLU 90 58 1 Y 1 B GLY 91 ? D GLY 91 59 1 Y 1 B SER 92 ? D SER 92 60 1 Y 1 B GLY 93 ? D GLY 93 61 1 Y 1 B SER 94 ? D SER 94 62 1 Y 1 B LYS 95 ? D LYS 95 63 1 Y 1 B GLY 96 ? D GLY 96 64 1 Y 1 B GLU 97 ? D GLU 97 65 1 Y 1 B GLY 112 ? D GLY 112 66 1 Y 1 B GLU 113 ? D GLU 113 67 1 Y 1 B LYS 114 ? D LYS 114 68 1 Y 1 B ALA 115 ? D ALA 115 69 1 Y 1 F DG 0 ? F DG 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 DA OP3 O N N 74 DA P P N N 75 DA OP1 O N N 76 DA OP2 O N N 77 DA "O5'" O N N 78 DA "C5'" C N N 79 DA "C4'" C N R 80 DA "O4'" O N N 81 DA "C3'" C N S 82 DA "O3'" O N N 83 DA "C2'" C N N 84 DA "C1'" C N R 85 DA N9 N Y N 86 DA C8 C Y N 87 DA N7 N Y N 88 DA C5 C Y N 89 DA C6 C Y N 90 DA N6 N N N 91 DA N1 N Y N 92 DA C2 C Y N 93 DA N3 N Y N 94 DA C4 C Y N 95 DA HOP3 H N N 96 DA HOP2 H N N 97 DA "H5'" H N N 98 DA "H5''" H N N 99 DA "H4'" H N N 100 DA "H3'" H N N 101 DA "HO3'" H N N 102 DA "H2'" H N N 103 DA "H2''" H N N 104 DA "H1'" H N N 105 DA H8 H N N 106 DA H61 H N N 107 DA H62 H N N 108 DA H2 H N N 109 DC OP3 O N N 110 DC P P N N 111 DC OP1 O N N 112 DC OP2 O N N 113 DC "O5'" O N N 114 DC "C5'" C N N 115 DC "C4'" C N R 116 DC "O4'" O N N 117 DC "C3'" C N S 118 DC "O3'" O N N 119 DC "C2'" C N N 120 DC "C1'" C N R 121 DC N1 N N N 122 DC C2 C N N 123 DC O2 O N N 124 DC N3 N N N 125 DC C4 C N N 126 DC N4 N N N 127 DC C5 C N N 128 DC C6 C N N 129 DC HOP3 H N N 130 DC HOP2 H N N 131 DC "H5'" H N N 132 DC "H5''" H N N 133 DC "H4'" H N N 134 DC "H3'" H N N 135 DC "HO3'" H N N 136 DC "H2'" H N N 137 DC "H2''" H N N 138 DC "H1'" H N N 139 DC H41 H N N 140 DC H42 H N N 141 DC H5 H N N 142 DC H6 H N N 143 DG OP3 O N N 144 DG P P N N 145 DG OP1 O N N 146 DG OP2 O N N 147 DG "O5'" O N N 148 DG "C5'" C N N 149 DG "C4'" C N R 150 DG "O4'" O N N 151 DG "C3'" C N S 152 DG "O3'" O N N 153 DG "C2'" C N N 154 DG "C1'" C N R 155 DG N9 N Y N 156 DG C8 C Y N 157 DG N7 N Y N 158 DG C5 C Y N 159 DG C6 C N N 160 DG O6 O N N 161 DG N1 N N N 162 DG C2 C N N 163 DG N2 N N N 164 DG N3 N N N 165 DG C4 C Y N 166 DG HOP3 H N N 167 DG HOP2 H N N 168 DG "H5'" H N N 169 DG "H5''" H N N 170 DG "H4'" H N N 171 DG "H3'" H N N 172 DG "HO3'" H N N 173 DG "H2'" H N N 174 DG "H2''" H N N 175 DG "H1'" H N N 176 DG H8 H N N 177 DG H1 H N N 178 DG H21 H N N 179 DG H22 H N N 180 DT OP3 O N N 181 DT P P N N 182 DT OP1 O N N 183 DT OP2 O N N 184 DT "O5'" O N N 185 DT "C5'" C N N 186 DT "C4'" C N R 187 DT "O4'" O N N 188 DT "C3'" C N S 189 DT "O3'" O N N 190 DT "C2'" C N N 191 DT "C1'" C N R 192 DT N1 N N N 193 DT C2 C N N 194 DT O2 O N N 195 DT N3 N N N 196 DT C4 C N N 197 DT O4 O N N 198 DT C5 C N N 199 DT C7 C N N 200 DT C6 C N N 201 DT HOP3 H N N 202 DT HOP2 H N N 203 DT "H5'" H N N 204 DT "H5''" H N N 205 DT "H4'" H N N 206 DT "H3'" H N N 207 DT "HO3'" H N N 208 DT "H2'" H N N 209 DT "H2''" H N N 210 DT "H1'" H N N 211 DT H3 H N N 212 DT H71 H N N 213 DT H72 H N N 214 DT H73 H N N 215 DT H6 H N N 216 GLN N N N N 217 GLN CA C N S 218 GLN C C N N 219 GLN O O N N 220 GLN CB C N N 221 GLN CG C N N 222 GLN CD C N N 223 GLN OE1 O N N 224 GLN NE2 N N N 225 GLN OXT O N N 226 GLN H H N N 227 GLN H2 H N N 228 GLN HA H N N 229 GLN HB2 H N N 230 GLN HB3 H N N 231 GLN HG2 H N N 232 GLN HG3 H N N 233 GLN HE21 H N N 234 GLN HE22 H N N 235 GLN HXT H N N 236 GLU N N N N 237 GLU CA C N S 238 GLU C C N N 239 GLU O O N N 240 GLU CB C N N 241 GLU CG C N N 242 GLU CD C N N 243 GLU OE1 O N N 244 GLU OE2 O N N 245 GLU OXT O N N 246 GLU H H N N 247 GLU H2 H N N 248 GLU HA H N N 249 GLU HB2 H N N 250 GLU HB3 H N N 251 GLU HG2 H N N 252 GLU HG3 H N N 253 GLU HE2 H N N 254 GLU HXT H N N 255 GLY N N N N 256 GLY CA C N N 257 GLY C C N N 258 GLY O O N N 259 GLY OXT O N N 260 GLY H H N N 261 GLY H2 H N N 262 GLY HA2 H N N 263 GLY HA3 H N N 264 GLY HXT H N N 265 ILE N N N N 266 ILE CA C N S 267 ILE C C N N 268 ILE O O N N 269 ILE CB C N S 270 ILE CG1 C N N 271 ILE CG2 C N N 272 ILE CD1 C N N 273 ILE OXT O N N 274 ILE H H N N 275 ILE H2 H N N 276 ILE HA H N N 277 ILE HB H N N 278 ILE HG12 H N N 279 ILE HG13 H N N 280 ILE HG21 H N N 281 ILE HG22 H N N 282 ILE HG23 H N N 283 ILE HD11 H N N 284 ILE HD12 H N N 285 ILE HD13 H N N 286 ILE HXT H N N 287 LEU N N N N 288 LEU CA C N S 289 LEU C C N N 290 LEU O O N N 291 LEU CB C N N 292 LEU CG C N N 293 LEU CD1 C N N 294 LEU CD2 C N N 295 LEU OXT O N N 296 LEU H H N N 297 LEU H2 H N N 298 LEU HA H N N 299 LEU HB2 H N N 300 LEU HB3 H N N 301 LEU HG H N N 302 LEU HD11 H N N 303 LEU HD12 H N N 304 LEU HD13 H N N 305 LEU HD21 H N N 306 LEU HD22 H N N 307 LEU HD23 H N N 308 LEU HXT H N N 309 LYS N N N N 310 LYS CA C N S 311 LYS C C N N 312 LYS O O N N 313 LYS CB C N N 314 LYS CG C N N 315 LYS CD C N N 316 LYS CE C N N 317 LYS NZ N N N 318 LYS OXT O N N 319 LYS H H N N 320 LYS H2 H N N 321 LYS HA H N N 322 LYS HB2 H N N 323 LYS HB3 H N N 324 LYS HG2 H N N 325 LYS HG3 H N N 326 LYS HD2 H N N 327 LYS HD3 H N N 328 LYS HE2 H N N 329 LYS HE3 H N N 330 LYS HZ1 H N N 331 LYS HZ2 H N N 332 LYS HZ3 H N N 333 LYS HXT H N N 334 MET N N N N 335 MET CA C N S 336 MET C C N N 337 MET O O N N 338 MET CB C N N 339 MET CG C N N 340 MET SD S N N 341 MET CE C N N 342 MET OXT O N N 343 MET H H N N 344 MET H2 H N N 345 MET HA H N N 346 MET HB2 H N N 347 MET HB3 H N N 348 MET HG2 H N N 349 MET HG3 H N N 350 MET HE1 H N N 351 MET HE2 H N N 352 MET HE3 H N N 353 MET HXT H N N 354 PHE N N N N 355 PHE CA C N S 356 PHE C C N N 357 PHE O O N N 358 PHE CB C N N 359 PHE CG C Y N 360 PHE CD1 C Y N 361 PHE CD2 C Y N 362 PHE CE1 C Y N 363 PHE CE2 C Y N 364 PHE CZ C Y N 365 PHE OXT O N N 366 PHE H H N N 367 PHE H2 H N N 368 PHE HA H N N 369 PHE HB2 H N N 370 PHE HB3 H N N 371 PHE HD1 H N N 372 PHE HD2 H N N 373 PHE HE1 H N N 374 PHE HE2 H N N 375 PHE HZ H N N 376 PHE HXT H N N 377 PRO N N N N 378 PRO CA C N S 379 PRO C C N N 380 PRO O O N N 381 PRO CB C N N 382 PRO CG C N N 383 PRO CD C N N 384 PRO OXT O N N 385 PRO H H N N 386 PRO HA H N N 387 PRO HB2 H N N 388 PRO HB3 H N N 389 PRO HG2 H N N 390 PRO HG3 H N N 391 PRO HD2 H N N 392 PRO HD3 H N N 393 PRO HXT H N N 394 SER N N N N 395 SER CA C N S 396 SER C C N N 397 SER O O N N 398 SER CB C N N 399 SER OG O N N 400 SER OXT O N N 401 SER H H N N 402 SER H2 H N N 403 SER HA H N N 404 SER HB2 H N N 405 SER HB3 H N N 406 SER HG H N N 407 SER HXT H N N 408 THR N N N N 409 THR CA C N S 410 THR C C N N 411 THR O O N N 412 THR CB C N R 413 THR OG1 O N N 414 THR CG2 C N N 415 THR OXT O N N 416 THR H H N N 417 THR H2 H N N 418 THR HA H N N 419 THR HB H N N 420 THR HG1 H N N 421 THR HG21 H N N 422 THR HG22 H N N 423 THR HG23 H N N 424 THR HXT H N N 425 TRP N N N N 426 TRP CA C N S 427 TRP C C N N 428 TRP O O N N 429 TRP CB C N N 430 TRP CG C Y N 431 TRP CD1 C Y N 432 TRP CD2 C Y N 433 TRP NE1 N Y N 434 TRP CE2 C Y N 435 TRP CE3 C Y N 436 TRP CZ2 C Y N 437 TRP CZ3 C Y N 438 TRP CH2 C Y N 439 TRP OXT O N N 440 TRP H H N N 441 TRP H2 H N N 442 TRP HA H N N 443 TRP HB2 H N N 444 TRP HB3 H N N 445 TRP HD1 H N N 446 TRP HE1 H N N 447 TRP HE3 H N N 448 TRP HZ2 H N N 449 TRP HZ3 H N N 450 TRP HH2 H N N 451 TRP HXT H N N 452 TYR N N N N 453 TYR CA C N S 454 TYR C C N N 455 TYR O O N N 456 TYR CB C N N 457 TYR CG C Y N 458 TYR CD1 C Y N 459 TYR CD2 C Y N 460 TYR CE1 C Y N 461 TYR CE2 C Y N 462 TYR CZ C Y N 463 TYR OH O N N 464 TYR OXT O N N 465 TYR H H N N 466 TYR H2 H N N 467 TYR HA H N N 468 TYR HB2 H N N 469 TYR HB3 H N N 470 TYR HD1 H N N 471 TYR HD2 H N N 472 TYR HE1 H N N 473 TYR HE2 H N N 474 TYR HH H N N 475 TYR HXT H N N 476 VAL N N N N 477 VAL CA C N S 478 VAL C C N N 479 VAL O O N N 480 VAL CB C N N 481 VAL CG1 C N N 482 VAL CG2 C N N 483 VAL OXT O N N 484 VAL H H N N 485 VAL H2 H N N 486 VAL HA H N N 487 VAL HB H N N 488 VAL HG11 H N N 489 VAL HG12 H N N 490 VAL HG13 H N N 491 VAL HG21 H N N 492 VAL HG22 H N N 493 VAL HG23 H N N 494 VAL HXT H N N 495 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DA OP3 P sing N N 70 DA OP3 HOP3 sing N N 71 DA P OP1 doub N N 72 DA P OP2 sing N N 73 DA P "O5'" sing N N 74 DA OP2 HOP2 sing N N 75 DA "O5'" "C5'" sing N N 76 DA "C5'" "C4'" sing N N 77 DA "C5'" "H5'" sing N N 78 DA "C5'" "H5''" sing N N 79 DA "C4'" "O4'" sing N N 80 DA "C4'" "C3'" sing N N 81 DA "C4'" "H4'" sing N N 82 DA "O4'" "C1'" sing N N 83 DA "C3'" "O3'" sing N N 84 DA "C3'" "C2'" sing N N 85 DA "C3'" "H3'" sing N N 86 DA "O3'" "HO3'" sing N N 87 DA "C2'" "C1'" sing N N 88 DA "C2'" "H2'" sing N N 89 DA "C2'" "H2''" sing N N 90 DA "C1'" N9 sing N N 91 DA "C1'" "H1'" sing N N 92 DA N9 C8 sing Y N 93 DA N9 C4 sing Y N 94 DA C8 N7 doub Y N 95 DA C8 H8 sing N N 96 DA N7 C5 sing Y N 97 DA C5 C6 sing Y N 98 DA C5 C4 doub Y N 99 DA C6 N6 sing N N 100 DA C6 N1 doub Y N 101 DA N6 H61 sing N N 102 DA N6 H62 sing N N 103 DA N1 C2 sing Y N 104 DA C2 N3 doub Y N 105 DA C2 H2 sing N N 106 DA N3 C4 sing Y N 107 DC OP3 P sing N N 108 DC OP3 HOP3 sing N N 109 DC P OP1 doub N N 110 DC P OP2 sing N N 111 DC P "O5'" sing N N 112 DC OP2 HOP2 sing N N 113 DC "O5'" "C5'" sing N N 114 DC "C5'" "C4'" sing N N 115 DC "C5'" "H5'" sing N N 116 DC "C5'" "H5''" sing N N 117 DC "C4'" "O4'" sing N N 118 DC "C4'" "C3'" sing N N 119 DC "C4'" "H4'" sing N N 120 DC "O4'" "C1'" sing N N 121 DC "C3'" "O3'" sing N N 122 DC "C3'" "C2'" sing N N 123 DC "C3'" "H3'" sing N N 124 DC "O3'" "HO3'" sing N N 125 DC "C2'" "C1'" sing N N 126 DC "C2'" "H2'" sing N N 127 DC "C2'" "H2''" sing N N 128 DC "C1'" N1 sing N N 129 DC "C1'" "H1'" sing N N 130 DC N1 C2 sing N N 131 DC N1 C6 sing N N 132 DC C2 O2 doub N N 133 DC C2 N3 sing N N 134 DC N3 C4 doub N N 135 DC C4 N4 sing N N 136 DC C4 C5 sing N N 137 DC N4 H41 sing N N 138 DC N4 H42 sing N N 139 DC C5 C6 doub N N 140 DC C5 H5 sing N N 141 DC C6 H6 sing N N 142 DG OP3 P sing N N 143 DG OP3 HOP3 sing N N 144 DG P OP1 doub N N 145 DG P OP2 sing N N 146 DG P "O5'" sing N N 147 DG OP2 HOP2 sing N N 148 DG "O5'" "C5'" sing N N 149 DG "C5'" "C4'" sing N N 150 DG "C5'" "H5'" sing N N 151 DG "C5'" "H5''" sing N N 152 DG "C4'" "O4'" sing N N 153 DG "C4'" "C3'" sing N N 154 DG "C4'" "H4'" sing N N 155 DG "O4'" "C1'" sing N N 156 DG "C3'" "O3'" sing N N 157 DG "C3'" "C2'" sing N N 158 DG "C3'" "H3'" sing N N 159 DG "O3'" "HO3'" sing N N 160 DG "C2'" "C1'" sing N N 161 DG "C2'" "H2'" sing N N 162 DG "C2'" "H2''" sing N N 163 DG "C1'" N9 sing N N 164 DG "C1'" "H1'" sing N N 165 DG N9 C8 sing Y N 166 DG N9 C4 sing Y N 167 DG C8 N7 doub Y N 168 DG C8 H8 sing N N 169 DG N7 C5 sing Y N 170 DG C5 C6 sing N N 171 DG C5 C4 doub Y N 172 DG C6 O6 doub N N 173 DG C6 N1 sing N N 174 DG N1 C2 sing N N 175 DG N1 H1 sing N N 176 DG C2 N2 sing N N 177 DG C2 N3 doub N N 178 DG N2 H21 sing N N 179 DG N2 H22 sing N N 180 DG N3 C4 sing N N 181 DT OP3 P sing N N 182 DT OP3 HOP3 sing N N 183 DT P OP1 doub N N 184 DT P OP2 sing N N 185 DT P "O5'" sing N N 186 DT OP2 HOP2 sing N N 187 DT "O5'" "C5'" sing N N 188 DT "C5'" "C4'" sing N N 189 DT "C5'" "H5'" sing N N 190 DT "C5'" "H5''" sing N N 191 DT "C4'" "O4'" sing N N 192 DT "C4'" "C3'" sing N N 193 DT "C4'" "H4'" sing N N 194 DT "O4'" "C1'" sing N N 195 DT "C3'" "O3'" sing N N 196 DT "C3'" "C2'" sing N N 197 DT "C3'" "H3'" sing N N 198 DT "O3'" "HO3'" sing N N 199 DT "C2'" "C1'" sing N N 200 DT "C2'" "H2'" sing N N 201 DT "C2'" "H2''" sing N N 202 DT "C1'" N1 sing N N 203 DT "C1'" "H1'" sing N N 204 DT N1 C2 sing N N 205 DT N1 C6 sing N N 206 DT C2 O2 doub N N 207 DT C2 N3 sing N N 208 DT N3 C4 sing N N 209 DT N3 H3 sing N N 210 DT C4 O4 doub N N 211 DT C4 C5 sing N N 212 DT C5 C7 sing N N 213 DT C5 C6 doub N N 214 DT C7 H71 sing N N 215 DT C7 H72 sing N N 216 DT C7 H73 sing N N 217 DT C6 H6 sing N N 218 GLN N CA sing N N 219 GLN N H sing N N 220 GLN N H2 sing N N 221 GLN CA C sing N N 222 GLN CA CB sing N N 223 GLN CA HA sing N N 224 GLN C O doub N N 225 GLN C OXT sing N N 226 GLN CB CG sing N N 227 GLN CB HB2 sing N N 228 GLN CB HB3 sing N N 229 GLN CG CD sing N N 230 GLN CG HG2 sing N N 231 GLN CG HG3 sing N N 232 GLN CD OE1 doub N N 233 GLN CD NE2 sing N N 234 GLN NE2 HE21 sing N N 235 GLN NE2 HE22 sing N N 236 GLN OXT HXT sing N N 237 GLU N CA sing N N 238 GLU N H sing N N 239 GLU N H2 sing N N 240 GLU CA C sing N N 241 GLU CA CB sing N N 242 GLU CA HA sing N N 243 GLU C O doub N N 244 GLU C OXT sing N N 245 GLU CB CG sing N N 246 GLU CB HB2 sing N N 247 GLU CB HB3 sing N N 248 GLU CG CD sing N N 249 GLU CG HG2 sing N N 250 GLU CG HG3 sing N N 251 GLU CD OE1 doub N N 252 GLU CD OE2 sing N N 253 GLU OE2 HE2 sing N N 254 GLU OXT HXT sing N N 255 GLY N CA sing N N 256 GLY N H sing N N 257 GLY N H2 sing N N 258 GLY CA C sing N N 259 GLY CA HA2 sing N N 260 GLY CA HA3 sing N N 261 GLY C O doub N N 262 GLY C OXT sing N N 263 GLY OXT HXT sing N N 264 ILE N CA sing N N 265 ILE N H sing N N 266 ILE N H2 sing N N 267 ILE CA C sing N N 268 ILE CA CB sing N N 269 ILE CA HA sing N N 270 ILE C O doub N N 271 ILE C OXT sing N N 272 ILE CB CG1 sing N N 273 ILE CB CG2 sing N N 274 ILE CB HB sing N N 275 ILE CG1 CD1 sing N N 276 ILE CG1 HG12 sing N N 277 ILE CG1 HG13 sing N N 278 ILE CG2 HG21 sing N N 279 ILE CG2 HG22 sing N N 280 ILE CG2 HG23 sing N N 281 ILE CD1 HD11 sing N N 282 ILE CD1 HD12 sing N N 283 ILE CD1 HD13 sing N N 284 ILE OXT HXT sing N N 285 LEU N CA sing N N 286 LEU N H sing N N 287 LEU N H2 sing N N 288 LEU CA C sing N N 289 LEU CA CB sing N N 290 LEU CA HA sing N N 291 LEU C O doub N N 292 LEU C OXT sing N N 293 LEU CB CG sing N N 294 LEU CB HB2 sing N N 295 LEU CB HB3 sing N N 296 LEU CG CD1 sing N N 297 LEU CG CD2 sing N N 298 LEU CG HG sing N N 299 LEU CD1 HD11 sing N N 300 LEU CD1 HD12 sing N N 301 LEU CD1 HD13 sing N N 302 LEU CD2 HD21 sing N N 303 LEU CD2 HD22 sing N N 304 LEU CD2 HD23 sing N N 305 LEU OXT HXT sing N N 306 LYS N CA sing N N 307 LYS N H sing N N 308 LYS N H2 sing N N 309 LYS CA C sing N N 310 LYS CA CB sing N N 311 LYS CA HA sing N N 312 LYS C O doub N N 313 LYS C OXT sing N N 314 LYS CB CG sing N N 315 LYS CB HB2 sing N N 316 LYS CB HB3 sing N N 317 LYS CG CD sing N N 318 LYS CG HG2 sing N N 319 LYS CG HG3 sing N N 320 LYS CD CE sing N N 321 LYS CD HD2 sing N N 322 LYS CD HD3 sing N N 323 LYS CE NZ sing N N 324 LYS CE HE2 sing N N 325 LYS CE HE3 sing N N 326 LYS NZ HZ1 sing N N 327 LYS NZ HZ2 sing N N 328 LYS NZ HZ3 sing N N 329 LYS OXT HXT sing N N 330 MET N CA sing N N 331 MET N H sing N N 332 MET N H2 sing N N 333 MET CA C sing N N 334 MET CA CB sing N N 335 MET CA HA sing N N 336 MET C O doub N N 337 MET C OXT sing N N 338 MET CB CG sing N N 339 MET CB HB2 sing N N 340 MET CB HB3 sing N N 341 MET CG SD sing N N 342 MET CG HG2 sing N N 343 MET CG HG3 sing N N 344 MET SD CE sing N N 345 MET CE HE1 sing N N 346 MET CE HE2 sing N N 347 MET CE HE3 sing N N 348 MET OXT HXT sing N N 349 PHE N CA sing N N 350 PHE N H sing N N 351 PHE N H2 sing N N 352 PHE CA C sing N N 353 PHE CA CB sing N N 354 PHE CA HA sing N N 355 PHE C O doub N N 356 PHE C OXT sing N N 357 PHE CB CG sing N N 358 PHE CB HB2 sing N N 359 PHE CB HB3 sing N N 360 PHE CG CD1 doub Y N 361 PHE CG CD2 sing Y N 362 PHE CD1 CE1 sing Y N 363 PHE CD1 HD1 sing N N 364 PHE CD2 CE2 doub Y N 365 PHE CD2 HD2 sing N N 366 PHE CE1 CZ doub Y N 367 PHE CE1 HE1 sing N N 368 PHE CE2 CZ sing Y N 369 PHE CE2 HE2 sing N N 370 PHE CZ HZ sing N N 371 PHE OXT HXT sing N N 372 PRO N CA sing N N 373 PRO N CD sing N N 374 PRO N H sing N N 375 PRO CA C sing N N 376 PRO CA CB sing N N 377 PRO CA HA sing N N 378 PRO C O doub N N 379 PRO C OXT sing N N 380 PRO CB CG sing N N 381 PRO CB HB2 sing N N 382 PRO CB HB3 sing N N 383 PRO CG CD sing N N 384 PRO CG HG2 sing N N 385 PRO CG HG3 sing N N 386 PRO CD HD2 sing N N 387 PRO CD HD3 sing N N 388 PRO OXT HXT sing N N 389 SER N CA sing N N 390 SER N H sing N N 391 SER N H2 sing N N 392 SER CA C sing N N 393 SER CA CB sing N N 394 SER CA HA sing N N 395 SER C O doub N N 396 SER C OXT sing N N 397 SER CB OG sing N N 398 SER CB HB2 sing N N 399 SER CB HB3 sing N N 400 SER OG HG sing N N 401 SER OXT HXT sing N N 402 THR N CA sing N N 403 THR N H sing N N 404 THR N H2 sing N N 405 THR CA C sing N N 406 THR CA CB sing N N 407 THR CA HA sing N N 408 THR C O doub N N 409 THR C OXT sing N N 410 THR CB OG1 sing N N 411 THR CB CG2 sing N N 412 THR CB HB sing N N 413 THR OG1 HG1 sing N N 414 THR CG2 HG21 sing N N 415 THR CG2 HG22 sing N N 416 THR CG2 HG23 sing N N 417 THR OXT HXT sing N N 418 TRP N CA sing N N 419 TRP N H sing N N 420 TRP N H2 sing N N 421 TRP CA C sing N N 422 TRP CA CB sing N N 423 TRP CA HA sing N N 424 TRP C O doub N N 425 TRP C OXT sing N N 426 TRP CB CG sing N N 427 TRP CB HB2 sing N N 428 TRP CB HB3 sing N N 429 TRP CG CD1 doub Y N 430 TRP CG CD2 sing Y N 431 TRP CD1 NE1 sing Y N 432 TRP CD1 HD1 sing N N 433 TRP CD2 CE2 doub Y N 434 TRP CD2 CE3 sing Y N 435 TRP NE1 CE2 sing Y N 436 TRP NE1 HE1 sing N N 437 TRP CE2 CZ2 sing Y N 438 TRP CE3 CZ3 doub Y N 439 TRP CE3 HE3 sing N N 440 TRP CZ2 CH2 doub Y N 441 TRP CZ2 HZ2 sing N N 442 TRP CZ3 CH2 sing Y N 443 TRP CZ3 HZ3 sing N N 444 TRP CH2 HH2 sing N N 445 TRP OXT HXT sing N N 446 TYR N CA sing N N 447 TYR N H sing N N 448 TYR N H2 sing N N 449 TYR CA C sing N N 450 TYR CA CB sing N N 451 TYR CA HA sing N N 452 TYR C O doub N N 453 TYR C OXT sing N N 454 TYR CB CG sing N N 455 TYR CB HB2 sing N N 456 TYR CB HB3 sing N N 457 TYR CG CD1 doub Y N 458 TYR CG CD2 sing Y N 459 TYR CD1 CE1 sing Y N 460 TYR CD1 HD1 sing N N 461 TYR CD2 CE2 doub Y N 462 TYR CD2 HD2 sing N N 463 TYR CE1 CZ doub Y N 464 TYR CE1 HE1 sing N N 465 TYR CE2 CZ sing Y N 466 TYR CE2 HE2 sing N N 467 TYR CZ OH sing N N 468 TYR OH HH sing N N 469 TYR OXT HXT sing N N 470 VAL N CA sing N N 471 VAL N H sing N N 472 VAL N H2 sing N N 473 VAL CA C sing N N 474 VAL CA CB sing N N 475 VAL CA HA sing N N 476 VAL C O doub N N 477 VAL C OXT sing N N 478 VAL CB CG1 sing N N 479 VAL CB CG2 sing N N 480 VAL CB HB sing N N 481 VAL CG1 HG11 sing N N 482 VAL CG1 HG12 sing N N 483 VAL CG1 HG13 sing N N 484 VAL CG2 HG21 sing N N 485 VAL CG2 HG22 sing N N 486 VAL CG2 HG23 sing N N 487 VAL OXT HXT sing N N 488 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 6IDO 'double helix' 6IDO 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 1 1_555 C DC 15 1_555 0.218 -0.200 -0.730 -5.044 4.612 0.392 1 C_DG1:DC14_D C 1 ? D 14 ? 19 1 1 B DA 2 1_555 C DT 14 1_555 0.307 -0.199 -0.091 1.850 -17.150 4.491 2 C_DA2:DT13_D C 2 ? D 13 ? 20 1 1 B DT 3 1_555 C DA 13 1_555 -0.512 -0.245 -0.034 2.666 -36.243 -6.987 3 C_DT3:DA12_D C 3 ? D 12 ? 20 1 1 B DT 4 1_555 C DA 12 1_555 -1.211 0.185 1.026 -15.173 -24.375 9.807 4 C_DT4:DA11_D C 4 ? D 11 ? ? ? 1 B DT 5 1_555 C DA 11 1_555 0.411 0.137 0.206 -8.284 -14.392 -1.155 5 C_DT5:DA10_D C 5 ? D 10 ? 20 1 1 B DG 6 1_555 C DC 10 1_555 -0.733 -0.438 1.377 16.710 -8.967 -4.519 6 C_DG6:DC9_D C 6 ? D 9 ? 19 1 1 B DT 7 1_555 C DA 9 1_555 1.041 -0.453 1.150 1.620 -15.560 -6.528 7 C_DT7:DA8_D C 7 ? D 8 ? 20 1 1 B DC 8 1_555 C DG 8 1_555 -0.063 -0.630 0.144 8.579 -25.092 -1.993 8 C_DC8:DG7_D C 8 ? D 7 ? 19 1 1 B DA 9 1_555 C DT 7 1_555 0.419 -0.545 0.977 11.874 -17.711 -14.744 9 C_DA9:DT6_D C 9 ? D 6 ? 20 1 1 B DA 10 1_555 C DT 6 1_555 0.808 0.088 0.749 7.607 -18.230 5.507 10 C_DA10:DT5_D C 10 ? D 5 ? 20 1 1 B DG 11 1_555 C DC 5 1_555 -0.250 0.084 0.696 -12.345 -15.157 14.819 11 C_DG11:DC4_D C 11 ? D 4 ? 19 1 1 B DT 12 1_555 C DA 4 1_555 0.039 0.129 0.296 -6.487 -9.017 -3.892 12 C_DT12:DA3_D C 12 ? D 3 ? 20 1 1 B DG 13 1_555 C DC 3 1_555 -0.412 0.228 -0.039 0.708 -24.725 20.779 13 C_DG13:DC2_D C 13 ? D 2 ? 22 1 1 B DG 14 1_555 C DC 2 1_555 0.983 -0.097 -1.060 -24.985 -17.380 -5.682 14 C_DG14:DC1_D C 14 ? D 1 ? 19 1 1 E DG 1 1_555 F DC 15 1_555 0.099 -0.120 0.502 1.484 -14.572 -4.652 15 E_DG1:DC14_F E 1 ? F 14 ? 19 1 1 E DA 2 1_555 F DT 14 1_555 0.069 -0.217 -0.635 6.217 -24.864 8.507 16 E_DA2:DT13_F E 2 ? F 13 ? 20 1 1 E DT 3 1_555 F DA 13 1_555 -0.826 -0.146 -0.058 4.299 -38.301 -0.239 17 E_DT3:DA12_F E 3 ? F 12 ? 20 1 1 E DT 4 1_555 F DA 12 1_555 -1.063 -0.201 0.558 -12.225 -34.290 5.064 18 E_DT4:DA11_F E 4 ? F 11 ? 20 1 1 E DT 5 1_555 F DA 11 1_555 0.673 0.108 0.304 -13.594 -18.541 -0.169 19 E_DT5:DA10_F E 5 ? F 10 ? 20 1 1 E DG 6 1_555 F DA 9 1_555 0.240 1.662 -1.762 15.614 -20.932 -30.172 20 E_DG6:DA8_F E 6 ? F 8 ? 8 1 1 E DC 8 1_555 F DG 8 1_555 -0.641 -0.610 0.591 -2.079 -40.433 -15.464 21 E_DC8:DG7_F E 8 ? F 7 ? 19 1 1 E DA 9 1_555 F DT 7 1_555 -0.473 -0.433 0.701 2.667 -23.503 -10.278 22 E_DA9:DT6_F E 9 ? F 6 ? 20 1 1 E DA 10 1_555 F DT 6 1_555 1.496 0.182 1.305 11.431 -14.375 2.733 23 E_DA10:DT5_F E 10 ? F 5 ? ? ? 1 E DG 11 1_555 F DC 5 1_555 -0.816 -0.243 0.261 -9.872 -19.214 7.834 24 E_DG11:DC4_F E 11 ? F 4 ? 19 1 1 E DT 12 1_555 F DA 4 1_555 -0.379 -0.172 0.897 -11.148 -12.676 -8.518 25 E_DT12:DA3_F E 12 ? F 3 ? 20 1 1 E DG 13 1_555 F DC 3 1_555 -0.667 -0.037 -0.480 -13.098 -22.577 9.536 26 E_DG13:DC2_F E 13 ? F 2 ? 19 1 1 E DG 14 1_555 F DC 2 1_555 -0.714 0.065 -1.038 -4.198 -30.379 -0.389 27 E_DG14:DC1_F E 14 ? F 1 ? ? 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 1 1_555 C DC 15 1_555 B DA 2 1_555 C DT 14 1_555 -0.652 0.535 3.228 -6.022 4.237 32.143 0.210 0.109 3.334 7.529 10.702 32.954 1 CC_DG1DA2:DT13DC14_DD C 1 ? D 14 ? C 2 ? D 13 ? 1 B DA 2 1_555 C DT 14 1_555 B DT 3 1_555 C DA 13 1_555 -1.167 -0.605 3.192 -3.134 -8.325 32.888 0.314 1.486 3.335 -14.380 5.413 34.037 2 CC_DA2DT3:DA12DT13_DD C 2 ? D 13 ? C 3 ? D 12 ? 1 B DT 3 1_555 C DA 13 1_555 B DT 4 1_555 C DA 12 1_555 1.152 -0.047 3.613 -1.816 -5.279 38.587 0.631 -1.968 3.533 -7.938 2.731 38.973 3 CC_DT3DT4:DA11DA12_DD C 3 ? D 12 ? C 4 ? D 11 ? 1 B DT 4 1_555 C DA 12 1_555 B DT 5 1_555 C DA 11 1_555 -0.488 -0.096 3.062 4.334 -3.324 41.779 0.186 1.095 2.997 -4.637 -6.046 42.119 4 CC_DT4DT5:DA10DA11_DD C 4 ? D 11 ? C 5 ? D 10 ? 1 B DT 5 1_555 C DA 11 1_555 B DG 6 1_555 C DC 10 1_555 0.513 -0.231 2.575 -9.501 0.419 29.852 -0.488 -2.323 2.303 0.789 17.881 31.297 5 CC_DT5DG6:DC9DA10_DD C 5 ? D 10 ? C 6 ? D 9 ? 1 B DG 6 1_555 C DC 10 1_555 B DT 7 1_555 C DA 9 1_555 0.284 -1.447 3.727 1.078 2.810 41.219 -2.389 -0.272 3.631 3.985 -1.529 41.324 6 CC_DG6DT7:DA8DC9_DD C 6 ? D 9 ? C 7 ? D 8 ? 1 B DT 7 1_555 C DA 9 1_555 B DC 8 1_555 C DG 8 1_555 -0.213 -0.645 2.956 11.714 -7.155 29.416 0.001 2.276 2.755 -13.221 -21.646 32.397 7 CC_DT7DC8:DG7DA8_DD C 7 ? D 8 ? C 8 ? D 7 ? 1 B DC 8 1_555 C DG 8 1_555 B DA 9 1_555 C DT 7 1_555 -0.493 0.302 3.509 -5.642 5.359 34.286 -0.375 -0.105 3.548 8.949 9.420 35.133 8 CC_DC8DA9:DT6DG7_DD C 8 ? D 7 ? C 9 ? D 6 ? 1 B DA 9 1_555 C DT 7 1_555 B DA 10 1_555 C DT 6 1_555 1.421 -0.896 3.339 5.154 0.926 36.676 -1.541 -1.512 3.477 1.462 -8.140 37.035 9 CC_DA9DA10:DT5DT6_DD C 9 ? D 6 ? C 10 ? D 5 ? 1 B DA 10 1_555 C DT 6 1_555 B DG 11 1_555 C DC 5 1_555 0.364 -1.000 3.796 -2.891 -6.957 32.163 -0.357 -1.224 3.875 -12.346 5.131 33.011 10 CC_DA10DG11:DC4DT5_DD C 10 ? D 5 ? C 11 ? D 4 ? 1 B DG 11 1_555 C DC 5 1_555 B DT 12 1_555 C DA 4 1_555 -1.613 -1.207 3.039 3.880 2.530 29.674 -2.788 3.817 2.702 4.901 -7.518 30.025 11 CC_DG11DT12:DA3DC4_DD C 11 ? D 4 ? C 12 ? D 3 ? 1 B DT 12 1_555 C DA 4 1_555 B DG 13 1_555 C DC 3 1_555 1.515 -0.071 3.155 4.231 17.589 24.152 -3.739 -2.051 2.711 36.234 -8.717 30.096 12 CC_DT12DG13:DC2DA3_DD C 12 ? D 3 ? C 13 ? D 2 ? 1 B DG 13 1_555 C DC 3 1_555 B DG 14 1_555 C DC 2 1_555 -2.130 0.655 4.047 -2.492 4.715 41.459 0.292 2.656 4.209 6.627 3.503 41.786 13 CC_DG13DG14:DC1DC2_DD C 13 ? D 2 ? C 14 ? D 1 ? 1 E DG 1 1_555 F DC 15 1_555 E DA 2 1_555 F DT 14 1_555 -0.840 0.142 3.496 12.630 4.421 34.870 -0.383 3.041 3.018 7.064 -20.181 37.275 14 EE_DG1DA2:DT13DC14_FF E 1 ? F 14 ? E 2 ? F 13 ? 1 E DA 2 1_555 F DT 14 1_555 E DT 3 1_555 F DA 13 1_555 -0.724 -0.336 3.180 -6.833 -2.212 30.586 -0.206 0.054 3.277 -4.122 12.733 31.398 15 EE_DA2DT3:DA12DT13_FF E 2 ? F 13 ? E 3 ? F 12 ? 1 E DT 3 1_555 F DA 13 1_555 E DT 4 1_555 F DA 12 1_555 0.533 0.277 3.651 -0.954 -5.797 41.888 1.042 -0.848 3.571 -8.060 1.326 42.280 16 EE_DT3DT4:DA11DA12_FF E 3 ? F 12 ? E 4 ? F 11 ? 1 E DT 4 1_555 F DA 12 1_555 E DT 5 1_555 F DA 11 1_555 -0.298 -0.063 3.448 1.239 -3.146 44.238 0.224 0.516 3.435 -4.170 -1.642 44.361 17 EE_DT4DT5:DA10DA11_FF E 4 ? F 11 ? E 5 ? F 10 ? 1 E DT 5 1_555 F DA 11 1_555 E DG 6 1_555 F DA 9 1_555 0.748 -1.120 4.191 -16.067 3.936 48.124 -1.651 -2.276 3.685 4.669 19.059 50.727 18 EE_DT5DG6:DA8DA10_FF E 5 ? F 10 ? E 6 ? F 8 ? 1 E DG 6 1_555 F DA 9 1_555 E DC 8 1_555 F DG 8 1_555 -1.022 -1.179 5.231 10.738 -16.587 46.274 0.571 2.477 5.016 -20.067 -12.991 50.102 19 EE_DG6DC8:DG7DA8_FF E 6 ? F 8 ? E 8 ? F 7 ? 1 E DC 8 1_555 F DG 8 1_555 E DA 9 1_555 F DT 7 1_555 0.389 -0.163 3.476 1.430 13.775 33.467 -2.322 -0.412 3.181 22.749 -2.361 36.143 20 EE_DC8DA9:DT6DG7_FF E 8 ? F 7 ? E 9 ? F 6 ? 1 E DA 9 1_555 F DT 7 1_555 E DA 10 1_555 F DT 6 1_555 0.946 -0.568 2.926 -1.333 -5.310 43.242 -0.305 -1.390 2.943 -7.171 1.801 43.571 21 EE_DA9DA10:DT5DT6_FF E 9 ? F 6 ? E 10 ? F 5 ? 1 E DA 10 1_555 F DT 6 1_555 E DG 11 1_555 F DC 5 1_555 0.110 -1.215 3.775 3.087 0.045 26.231 -2.674 0.709 3.760 0.099 -6.773 26.408 22 EE_DA10DG11:DC4DT5_FF E 10 ? F 5 ? E 11 ? F 4 ? 1 E DG 11 1_555 F DC 5 1_555 E DT 12 1_555 F DA 4 1_555 -1.662 -1.233 3.304 -7.974 -3.012 33.362 -1.575 1.460 3.686 -5.143 13.616 34.403 23 EE_DG11DT12:DA3DC4_FF E 11 ? F 4 ? E 12 ? F 3 ? 1 E DT 12 1_555 F DA 4 1_555 E DG 13 1_555 F DC 3 1_555 0.981 0.577 3.437 14.746 7.249 34.737 -0.149 0.599 3.598 11.387 -23.164 38.319 24 EE_DT12DG13:DC2DA3_FF E 12 ? F 3 ? E 13 ? F 2 ? 1 E DG 13 1_555 F DC 3 1_555 E DG 14 1_555 F DC 2 1_555 -0.961 1.325 3.123 -2.416 4.228 34.495 1.578 1.242 3.315 7.087 4.048 34.826 25 EE_DG13DG14:DC1DC2_FF E 13 ? F 2 ? E 14 ? F 1 ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5IPL _pdbx_initial_refinement_model.details ? #