HEADER TRANSLATION 13-SEP-18 6IE7 TITLE CRYSTAL STRUCTURE OF ADCP1 TANDEM AGENET DOMAIN 1-2 IN COMPLEX WITH TITLE 2 H3K9ME2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: AGENET DOMAIN-CONTAINING PROTEIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: AGENET DOMAIN, UNP RESIDUES 31-177; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: H3K9ME2 PEPTIDE; COMPND 8 CHAIN: E, F, G, H; COMPND 9 FRAGMENT: H3 PEPTIDE 1-15, K9 DIMETHYLATION; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: MOUSE-EAR CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: ADCP1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX6P; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 14 ORGANISM_TAXID: 3702; SOURCE 15 OTHER_DETAILS: CHEMICALLY SYNTHESIZED H3K9ME1 PEPTIDE KEYWDS AGENET DOMAIN, TRANSLATION EXPDTA X-RAY DIFFRACTION AUTHOR S.ZHAO,B.ZHANG,H.LI REVDAT 1 16-JAN-19 6IE7 0 JRNL AUTH S.ZHAO,B.ZHANG,H.LI JRNL TITL ADCP1-TANDEM AGENET DOMAIN 1-2 IN COMPLEX WIT H H3K9ME2 JRNL REF CELL RES. V. 29 54 2019 JRNL REFN ISSN 1001-0602 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.91 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.410 REMARK 3 COMPLETENESS FOR RANGE (%) : 88.9 REMARK 3 NUMBER OF REFLECTIONS : 15139 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.350 REMARK 3 FREE R VALUE TEST SET COUNT : 810 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.9106 - 4.9023 0.85 2319 127 0.1898 0.2254 REMARK 3 2 4.9023 - 3.8929 0.91 2487 112 0.1591 0.2135 REMARK 3 3 3.8929 - 3.4013 0.86 2292 141 0.1843 0.2665 REMARK 3 4 3.4013 - 3.0906 0.89 2387 137 0.1954 0.2588 REMARK 3 5 3.0906 - 2.8692 0.91 2424 152 0.2311 0.3144 REMARK 3 6 2.8692 - 2.7001 0.91 2420 141 0.2531 0.3494 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.390 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.670 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 44.71 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.77 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 4770 REMARK 3 ANGLE : 1.258 6410 REMARK 3 CHIRALITY : 0.051 659 REMARK 3 PLANARITY : 0.009 809 REMARK 3 DIHEDRAL : 14.345 1799 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 2 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A AND SEGID AA REMARK 3 SELECTION : CHAIN B AND SEGID BA REMARK 3 ATOM PAIRS NUMBER : 2555 REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: CHAIN A AND SEGID AA REMARK 3 SELECTION : CHAIN C AND SEGID CA REMARK 3 ATOM PAIRS NUMBER : 2555 REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 3 REMARK 3 REFERENCE SELECTION: CHAIN A AND SEGID AA REMARK 3 SELECTION : CHAIN D AND SEGID DA REMARK 3 ATOM PAIRS NUMBER : 2555 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN E AND SEGID E REMARK 3 SELECTION : CHAIN F AND SEGID F REMARK 3 ATOM PAIRS NUMBER : 157 REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: CHAIN E AND SEGID E REMARK 3 SELECTION : CHAIN G AND SEGID G REMARK 3 ATOM PAIRS NUMBER : 157 REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 3 REMARK 3 REFERENCE SELECTION: CHAIN E AND SEGID E REMARK 3 SELECTION : CHAIN H AND SEGID H REMARK 3 ATOM PAIRS NUMBER : 157 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6IE7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-SEP-18. REMARK 100 THE DEPOSITION ID IS D_1300009054. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-OCT-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL, SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15173 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.1 REMARK 200 DATA REDUNDANCY : 2.500 REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.75 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.50 REMARK 200 R MERGE FOR SHELL (I) : 0.29500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM ACETATE, 28% PEG 4000, REMARK 280 0.1M SODIUM ACETATE PH 5.0, PH 7.5, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 55.66900 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -2.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1560 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8400 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -4 REMARK 465 PRO A -3 REMARK 465 LEU A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 ASN A 1 REMARK 465 ARG A 2 REMARK 465 LYS A 3 REMARK 465 ARG A 4 REMARK 465 LEU A 5 REMARK 465 SER A 38 REMARK 465 SER A 39 REMARK 465 SER A 40 REMARK 465 ASP A 41 REMARK 465 LYS A 42 REMARK 465 ASP A 43 REMARK 465 SER A 44 REMARK 465 MET A 80 REMARK 465 SER A 81 REMARK 465 THR E 11 REMARK 465 GLY B -4 REMARK 465 PRO B -3 REMARK 465 LEU B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 ASN B 1 REMARK 465 ARG B 2 REMARK 465 LYS B 3 REMARK 465 ARG B 4 REMARK 465 SER B 38 REMARK 465 SER B 39 REMARK 465 SER B 40 REMARK 465 ASP B 41 REMARK 465 LYS B 42 REMARK 465 ASP B 43 REMARK 465 SER B 44 REMARK 465 SER B 81 REMARK 465 GLU B 82 REMARK 465 ILE B 83 REMARK 465 GLU B 84 REMARK 465 LYS B 85 REMARK 465 THR F 11 REMARK 465 GLY C -4 REMARK 465 PRO C -3 REMARK 465 LEU C -2 REMARK 465 GLY C -1 REMARK 465 SER C 0 REMARK 465 ASN C 1 REMARK 465 ARG C 2 REMARK 465 LYS C 3 REMARK 465 ARG C 4 REMARK 465 LEU C 5 REMARK 465 SER C 38 REMARK 465 SER C 39 REMARK 465 SER C 40 REMARK 465 ASP C 41 REMARK 465 LYS C 42 REMARK 465 ASP C 43 REMARK 465 SER C 44 REMARK 465 VAL C 45 REMARK 465 MET C 80 REMARK 465 SER C 81 REMARK 465 GLU C 82 REMARK 465 ILE C 83 REMARK 465 GLU C 84 REMARK 465 LYS C 85 REMARK 465 GLY D -4 REMARK 465 PRO D -3 REMARK 465 LEU D -2 REMARK 465 GLY D -1 REMARK 465 SER D 0 REMARK 465 ASN D 1 REMARK 465 ARG D 2 REMARK 465 LYS D 3 REMARK 465 ARG D 4 REMARK 465 LEU D 5 REMARK 465 ILE D 36 REMARK 465 PRO D 37 REMARK 465 SER D 38 REMARK 465 SER D 39 REMARK 465 SER D 40 REMARK 465 ASP D 41 REMARK 465 LYS D 42 REMARK 465 ASP D 43 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS A 10 O HOH A 301 1.90 REMARK 500 OG SER D 81 OE1 GLU D 84 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 37 C - N - CD ANGL. DEV. = -15.7 DEGREES REMARK 500 PRO B 6 C - N - CA ANGL. DEV. = 14.8 DEGREES REMARK 500 PRO B 6 C - N - CD ANGL. DEV. = -15.3 DEGREES REMARK 500 PRO B 37 C - N - CD ANGL. DEV. = -13.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 9 22.08 -77.87 REMARK 500 ASP A 143 49.19 38.89 REMARK 500 PRO B 6 116.93 -27.29 REMARK 500 ASP B 143 45.70 36.75 REMARK 500 ASP C 143 48.49 39.22 REMARK 500 ASP D 143 52.36 36.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NH4 B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NH4 C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NH4 D 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide ARG F 8 and MLY F 9 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide MLY F 9 and SER F 10 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide ARG G 8 and MLY G 9 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide MLY G 9 and SER G 10 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide ARG H 8 and MLY H 9 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide MLY H 9 and SER H 10 DBREF 6IE7 A 1 147 UNP Q500V5 Q500V5_ARATH 31 177 DBREF 6IE7 E 1 11 PDB 6IE7 6IE7 1 11 DBREF 6IE7 B 1 147 UNP Q500V5 Q500V5_ARATH 31 177 DBREF 6IE7 F 1 11 PDB 6IE7 6IE7 1 11 DBREF 6IE7 C 1 147 UNP Q500V5 Q500V5_ARATH 31 177 DBREF 6IE7 G 1 11 PDB 6IE7 6IE7 1 11 DBREF 6IE7 D 1 147 UNP Q500V5 Q500V5_ARATH 31 177 DBREF 6IE7 H 1 11 PDB 6IE7 6IE7 1 11 SEQADV 6IE7 GLY A -4 UNP Q500V5 EXPRESSION TAG SEQADV 6IE7 PRO A -3 UNP Q500V5 EXPRESSION TAG SEQADV 6IE7 LEU A -2 UNP Q500V5 EXPRESSION TAG SEQADV 6IE7 GLY A -1 UNP Q500V5 EXPRESSION TAG SEQADV 6IE7 SER A 0 UNP Q500V5 EXPRESSION TAG SEQADV 6IE7 GLY B -4 UNP Q500V5 EXPRESSION TAG SEQADV 6IE7 PRO B -3 UNP Q500V5 EXPRESSION TAG SEQADV 6IE7 LEU B -2 UNP Q500V5 EXPRESSION TAG SEQADV 6IE7 GLY B -1 UNP Q500V5 EXPRESSION TAG SEQADV 6IE7 SER B 0 UNP Q500V5 EXPRESSION TAG SEQADV 6IE7 GLY C -4 UNP Q500V5 EXPRESSION TAG SEQADV 6IE7 PRO C -3 UNP Q500V5 EXPRESSION TAG SEQADV 6IE7 LEU C -2 UNP Q500V5 EXPRESSION TAG SEQADV 6IE7 GLY C -1 UNP Q500V5 EXPRESSION TAG SEQADV 6IE7 SER C 0 UNP Q500V5 EXPRESSION TAG SEQADV 6IE7 GLY D -4 UNP Q500V5 EXPRESSION TAG SEQADV 6IE7 PRO D -3 UNP Q500V5 EXPRESSION TAG SEQADV 6IE7 LEU D -2 UNP Q500V5 EXPRESSION TAG SEQADV 6IE7 GLY D -1 UNP Q500V5 EXPRESSION TAG SEQADV 6IE7 SER D 0 UNP Q500V5 EXPRESSION TAG SEQRES 1 A 152 GLY PRO LEU GLY SER ASN ARG LYS ARG LEU PRO SER TYR SEQRES 2 A 152 LEU LYS PRO GLY SER ALA VAL GLU ILE SER SER ASP GLU SEQRES 3 A 152 ILE GLY PHE ARG GLY SER TRP TYR MET GLY LYS VAL ILE SEQRES 4 A 152 THR ILE PRO SER SER SER ASP LYS ASP SER VAL LYS CYS SEQRES 5 A 152 GLN VAL GLU TYR THR THR LEU PHE PHE ASP LYS GLU GLY SEQRES 6 A 152 THR LYS PRO LEU LYS GLU VAL VAL ASP MET SER GLN LEU SEQRES 7 A 152 ARG PRO PRO ALA PRO PRO MET SER GLU ILE GLU LYS LYS SEQRES 8 A 152 LYS LYS ILE VAL VAL GLY GLU GLU VAL ASP ALA PHE TYR SEQRES 9 A 152 ASN ASP GLY TRP TRP GLU GLY ASP VAL THR GLU VAL LEU SEQRES 10 A 152 ASP ASP GLY LYS PHE SER VAL PHE PHE ARG SER SER LYS SEQRES 11 A 152 GLU GLN ILE ARG PHE ARG LYS ASP GLU LEU ARG PHE HIS SEQRES 12 A 152 ARG GLU TRP VAL ASP GLY ALA TRP LYS SEQRES 1 E 11 ALA ARG THR LYS GLN THR ALA ARG MLY SER THR SEQRES 1 B 152 GLY PRO LEU GLY SER ASN ARG LYS ARG LEU PRO SER TYR SEQRES 2 B 152 LEU LYS PRO GLY SER ALA VAL GLU ILE SER SER ASP GLU SEQRES 3 B 152 ILE GLY PHE ARG GLY SER TRP TYR MET GLY LYS VAL ILE SEQRES 4 B 152 THR ILE PRO SER SER SER ASP LYS ASP SER VAL LYS CYS SEQRES 5 B 152 GLN VAL GLU TYR THR THR LEU PHE PHE ASP LYS GLU GLY SEQRES 6 B 152 THR LYS PRO LEU LYS GLU VAL VAL ASP MET SER GLN LEU SEQRES 7 B 152 ARG PRO PRO ALA PRO PRO MET SER GLU ILE GLU LYS LYS SEQRES 8 B 152 LYS LYS ILE VAL VAL GLY GLU GLU VAL ASP ALA PHE TYR SEQRES 9 B 152 ASN ASP GLY TRP TRP GLU GLY ASP VAL THR GLU VAL LEU SEQRES 10 B 152 ASP ASP GLY LYS PHE SER VAL PHE PHE ARG SER SER LYS SEQRES 11 B 152 GLU GLN ILE ARG PHE ARG LYS ASP GLU LEU ARG PHE HIS SEQRES 12 B 152 ARG GLU TRP VAL ASP GLY ALA TRP LYS SEQRES 1 F 11 ALA ARG THR LYS GLN THR ALA ARG MLY SER THR SEQRES 1 C 152 GLY PRO LEU GLY SER ASN ARG LYS ARG LEU PRO SER TYR SEQRES 2 C 152 LEU LYS PRO GLY SER ALA VAL GLU ILE SER SER ASP GLU SEQRES 3 C 152 ILE GLY PHE ARG GLY SER TRP TYR MET GLY LYS VAL ILE SEQRES 4 C 152 THR ILE PRO SER SER SER ASP LYS ASP SER VAL LYS CYS SEQRES 5 C 152 GLN VAL GLU TYR THR THR LEU PHE PHE ASP LYS GLU GLY SEQRES 6 C 152 THR LYS PRO LEU LYS GLU VAL VAL ASP MET SER GLN LEU SEQRES 7 C 152 ARG PRO PRO ALA PRO PRO MET SER GLU ILE GLU LYS LYS SEQRES 8 C 152 LYS LYS ILE VAL VAL GLY GLU GLU VAL ASP ALA PHE TYR SEQRES 9 C 152 ASN ASP GLY TRP TRP GLU GLY ASP VAL THR GLU VAL LEU SEQRES 10 C 152 ASP ASP GLY LYS PHE SER VAL PHE PHE ARG SER SER LYS SEQRES 11 C 152 GLU GLN ILE ARG PHE ARG LYS ASP GLU LEU ARG PHE HIS SEQRES 12 C 152 ARG GLU TRP VAL ASP GLY ALA TRP LYS SEQRES 1 G 11 ALA ARG THR LYS GLN THR ALA ARG MLY SER THR SEQRES 1 D 152 GLY PRO LEU GLY SER ASN ARG LYS ARG LEU PRO SER TYR SEQRES 2 D 152 LEU LYS PRO GLY SER ALA VAL GLU ILE SER SER ASP GLU SEQRES 3 D 152 ILE GLY PHE ARG GLY SER TRP TYR MET GLY LYS VAL ILE SEQRES 4 D 152 THR ILE PRO SER SER SER ASP LYS ASP SER VAL LYS CYS SEQRES 5 D 152 GLN VAL GLU TYR THR THR LEU PHE PHE ASP LYS GLU GLY SEQRES 6 D 152 THR LYS PRO LEU LYS GLU VAL VAL ASP MET SER GLN LEU SEQRES 7 D 152 ARG PRO PRO ALA PRO PRO MET SER GLU ILE GLU LYS LYS SEQRES 8 D 152 LYS LYS ILE VAL VAL GLY GLU GLU VAL ASP ALA PHE TYR SEQRES 9 D 152 ASN ASP GLY TRP TRP GLU GLY ASP VAL THR GLU VAL LEU SEQRES 10 D 152 ASP ASP GLY LYS PHE SER VAL PHE PHE ARG SER SER LYS SEQRES 11 D 152 GLU GLN ILE ARG PHE ARG LYS ASP GLU LEU ARG PHE HIS SEQRES 12 D 152 ARG GLU TRP VAL ASP GLY ALA TRP LYS SEQRES 1 H 11 ALA ARG THR LYS GLN THR ALA ARG MLY SER THR HET MLY E 9 11 HET MLY F 9 11 HET MLY G 9 11 HET MLY H 9 11 HET NH4 A 201 5 HET NH4 B 201 5 HET NH4 C 201 5 HET NH4 D 201 5 HETNAM MLY N-DIMETHYL-LYSINE HETNAM NH4 AMMONIUM ION FORMUL 2 MLY 4(C8 H18 N2 O2) FORMUL 9 NH4 4(H4 N 1+) FORMUL 13 HOH *49(H2 O) HELIX 1 AA1 PRO A 6 LYS A 10 5 5 HELIX 2 AA2 ILE A 83 LYS A 87 1 5 HELIX 3 AA3 PRO B 6 LYS B 10 5 5 HELIX 4 AA4 ARG B 131 ASP B 133 5 3 HELIX 5 AA5 ASP C 69 SER C 71 5 3 HELIX 6 AA6 THR G 3 ARG G 8 1 6 HELIX 7 AA7 PRO D 6 LYS D 10 5 5 SHEET 1 AA1 5 LEU A 73 ARG A 74 0 SHEET 2 AA1 5 ALA A 14 ILE A 17 -1 N GLU A 16 O ARG A 74 SHEET 3 AA1 5 SER A 27 THR A 35 -1 O TYR A 29 N ILE A 17 SHEET 4 AA1 5 LYS A 46 PHE A 55 -1 O GLN A 48 N THR A 35 SHEET 5 AA1 5 PRO A 63 ASP A 69 -1 O LEU A 64 N TYR A 51 SHEET 1 AA2 6 LEU A 135 PHE A 137 0 SHEET 2 AA2 6 GLU A 94 TYR A 99 -1 N ASP A 96 O ARG A 136 SHEET 3 AA2 6 GLY A 102 VAL A 111 -1 O TRP A 104 N ALA A 97 SHEET 4 AA2 6 SER A 27 THR A 35 -1 N TRP A 28 O TRP A 103 SHEET 5 AA2 6 LYS A 46 PHE A 55 -1 O GLN A 48 N THR A 35 SHEET 6 AA2 6 ARG E 2 THR E 3 1 O ARG E 2 N PHE A 55 SHEET 1 AA3 5 GLU A 126 ARG A 131 0 SHEET 2 AA3 5 LYS A 116 PHE A 121 -1 N VAL A 119 O ILE A 128 SHEET 3 AA3 5 GLY A 102 VAL A 111 -1 N ASP A 107 O PHE A 120 SHEET 4 AA3 5 GLU A 94 TYR A 99 -1 N ALA A 97 O TRP A 104 SHEET 5 AA3 5 LEU A 135 PHE A 137 -1 O ARG A 136 N ASP A 96 SHEET 1 AA4 2 TRP A 141 VAL A 142 0 SHEET 2 AA4 2 ALA A 145 TRP A 146 -1 O ALA A 145 N VAL A 142 SHEET 1 AA5 6 PRO B 63 ASP B 69 0 SHEET 2 AA5 6 LYS B 46 PHE B 55 -1 N VAL B 49 O GLU B 66 SHEET 3 AA5 6 SER B 27 THR B 35 -1 N THR B 35 O GLN B 48 SHEET 4 AA5 6 GLY B 102 VAL B 111 -1 O TRP B 103 N TRP B 28 SHEET 5 AA5 6 PHE B 117 PHE B 121 -1 O PHE B 120 N ASP B 107 SHEET 6 AA5 6 GLU B 126 PHE B 130 -1 O PHE B 130 N PHE B 117 SHEET 1 AA6 6 LEU B 73 ARG B 74 0 SHEET 2 AA6 6 ALA B 14 ILE B 17 -1 N GLU B 16 O ARG B 74 SHEET 3 AA6 6 SER B 27 THR B 35 -1 O TYR B 29 N ILE B 17 SHEET 4 AA6 6 GLY B 102 VAL B 111 -1 O TRP B 103 N TRP B 28 SHEET 5 AA6 6 GLU B 94 TYR B 99 -1 N ALA B 97 O TRP B 104 SHEET 6 AA6 6 LEU B 135 PHE B 137 -1 O ARG B 136 N ASP B 96 SHEET 1 AA7 2 TRP B 141 VAL B 142 0 SHEET 2 AA7 2 ALA B 145 TRP B 146 -1 O ALA B 145 N VAL B 142 SHEET 1 AA8 6 PRO C 63 VAL C 68 0 SHEET 2 AA8 6 CYS C 47 PHE C 55 -1 N VAL C 49 O GLU C 66 SHEET 3 AA8 6 SER C 27 THR C 35 -1 N LYS C 32 O GLU C 50 SHEET 4 AA8 6 GLY C 102 VAL C 111 -1 O TRP C 103 N TRP C 28 SHEET 5 AA8 6 LYS C 116 PHE C 121 -1 O SER C 118 N THR C 109 SHEET 6 AA8 6 GLU C 126 ARG C 131 -1 O PHE C 130 N PHE C 117 SHEET 1 AA9 6 LEU C 73 ARG C 74 0 SHEET 2 AA9 6 ALA C 14 ILE C 17 -1 N GLU C 16 O ARG C 74 SHEET 3 AA9 6 SER C 27 THR C 35 -1 O TYR C 29 N ILE C 17 SHEET 4 AA9 6 GLY C 102 VAL C 111 -1 O TRP C 103 N TRP C 28 SHEET 5 AA9 6 GLU C 94 TYR C 99 -1 N ALA C 97 O TRP C 104 SHEET 6 AA9 6 LEU C 135 PHE C 137 -1 O ARG C 136 N ASP C 96 SHEET 1 AB1 2 TRP C 141 VAL C 142 0 SHEET 2 AB1 2 ALA C 145 TRP C 146 -1 O ALA C 145 N VAL C 142 SHEET 1 AB2 6 PRO D 63 ASP D 69 0 SHEET 2 AB2 6 LYS D 46 PHE D 55 -1 N LEU D 54 O LEU D 64 SHEET 3 AB2 6 SER D 27 VAL D 33 -1 N LYS D 32 O GLU D 50 SHEET 4 AB2 6 GLY D 102 VAL D 111 -1 O TRP D 103 N TRP D 28 SHEET 5 AB2 6 LYS D 116 PHE D 121 -1 O PHE D 120 N ASP D 107 SHEET 6 AB2 6 GLU D 126 ARG D 131 -1 O ILE D 128 N VAL D 119 SHEET 1 AB3 6 LEU D 73 ARG D 74 0 SHEET 2 AB3 6 ALA D 14 SER D 18 -1 N GLU D 16 O ARG D 74 SHEET 3 AB3 6 SER D 27 VAL D 33 -1 O TYR D 29 N ILE D 17 SHEET 4 AB3 6 GLY D 102 VAL D 111 -1 O TRP D 103 N TRP D 28 SHEET 5 AB3 6 GLU D 94 TYR D 99 -1 N ALA D 97 O TRP D 104 SHEET 6 AB3 6 LEU D 135 PHE D 137 -1 O ARG D 136 N ASP D 96 SHEET 1 AB4 2 TRP D 141 VAL D 142 0 SHEET 2 AB4 2 ALA D 145 TRP D 146 -1 O ALA D 145 N VAL D 142 LINK C ARG E 8 N MLY E 9 1555 1555 1.32 LINK C MLY E 9 N SER E 10 1555 1555 1.33 LINK C ARG F 8 N MLY F 9 1555 1555 1.33 LINK C MLY F 9 N SER F 10 1555 1555 1.33 LINK C ARG G 8 N MLY G 9 1555 1555 1.32 LINK C MLY G 9 N SER G 10 1555 1555 1.33 LINK C ARG H 8 N MLY H 9 1555 1555 1.33 LINK C MLY H 9 N SER H 10 1555 1555 1.33 SITE 1 AC1 1 TYR B 51 SITE 1 AC2 1 TYR C 51 SITE 1 AC3 1 TYR D 51 SITE 1 AC4 13 GLU B 21 GLY B 23 PHE B 24 TYR B 99 SITE 2 AC4 13 TRP B 104 PHE B 121 SER B 124 GLU B 126 SITE 3 AC4 13 LYS F 4 GLN F 5 ALA F 7 SER F 10 SITE 4 AC4 13 HOH F 103 SITE 1 AC5 11 GLY B 23 TYR B 99 TRP B 104 PHE B 121 SITE 2 AC5 11 SER B 124 GLU B 126 ASP C 114 ARG C 129 SITE 3 AC5 11 ALA F 7 ARG F 8 HOH F 101 SITE 1 AC6 13 LYS B 116 ARG B 129 GLU C 21 ILE C 22 SITE 2 AC6 13 GLY C 23 PHE C 24 TYR C 99 TRP C 104 SITE 3 AC6 13 GLU C 126 LYS G 4 ALA G 7 SER G 10 SITE 4 AC6 13 THR G 11 SITE 1 AC7 9 ASP B 114 ARG B 129 ILE C 22 GLY C 23 SITE 2 AC7 9 TYR C 99 TRP C 104 GLU C 126 ARG G 8 SITE 3 AC7 9 THR G 11 SITE 1 AC8 10 GLU D 21 ILE D 22 GLY D 23 PHE D 24 SITE 2 AC8 10 TYR D 99 PHE D 121 GLU D 126 LYS H 4 SITE 3 AC8 10 ALA H 7 SER H 10 SITE 1 AC9 12 LEU A 112 ASP A 114 LYS A 116 ARG A 129 SITE 2 AC9 12 GLY D 23 TYR D 99 PHE D 121 SER D 124 SITE 3 AC9 12 GLU D 126 ALA H 7 ARG H 8 THR H 11 CRYST1 41.472 111.338 68.144 90.00 90.63 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024113 0.000000 0.000265 0.00000 SCALE2 0.000000 0.008982 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014676 0.00000