HEADER OXIDOREDUCTASE 29-SEP-18 6IHD TITLE CRYSTAL STRUCTURE OF MALATE DEHYDROGENASE FROM METALLOSPHAERA SEDULA COMPND MOL_ID: 1; COMPND 2 MOLECULE: MALATE DEHYDROGENASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 2-306; COMPND 5 EC: 1.1.1.37; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METALLOSPHAERA SEDULA; SOURCE 3 ORGANISM_TAXID: 43687; SOURCE 4 STRAIN: DSM 5348; SOURCE 5 GENE: HA72_0455; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21_T1R(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET30A KEYWDS OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR D.LEE,K.J.KIM REVDAT 3 22-NOV-23 6IHD 1 REMARK REVDAT 2 09-SEP-20 6IHD 1 TITLE REVDAT 1 06-FEB-19 6IHD 0 JRNL AUTH D.LEE,J.HONG,K.J.KIM JRNL TITL CRYSTAL STRUCTURE AND BIOCHEMICAL CHARACTERIZATION OF MALATE JRNL TITL 2 DEHYDROGENASE FROM METALLOSPHAERA SEDULA JRNL REF BIOCHEM. BIOPHYS. RES. V. 509 833 2019 JRNL REF 2 COMMUN. JRNL REFN ESSN 1090-2104 JRNL PMID 30638660 JRNL DOI 10.1016/J.BBRC.2019.01.018 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 38270 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.242 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2006 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2669 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.42 REMARK 3 BIN R VALUE (WORKING SET) : 0.3210 REMARK 3 BIN FREE R VALUE SET COUNT : 139 REMARK 3 BIN FREE R VALUE : 0.3510 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4630 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 100 REMARK 3 SOLVENT ATOMS : 64 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.71 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.03000 REMARK 3 B22 (A**2) : -0.03000 REMARK 3 B33 (A**2) : 0.06000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.218 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.202 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.156 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.772 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4825 ; 0.016 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4740 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6518 ; 1.941 ; 1.993 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10967 ; 1.076 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 600 ; 7.230 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 181 ;41.637 ;25.138 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 869 ;17.879 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;19.217 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 746 ; 0.107 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5256 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 983 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6IHD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-OCT-18. REMARK 100 THE DEPOSITION ID IS D_1300009199. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-FEB-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 7A (6B, 6C1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97934 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40297 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 200 DATA REDUNDANCY : 11.30 REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.1 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : 0.27100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4PLH REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 35 %(V/V) 2-ETHOXYETHANOL, 0.1M SODIUM REMARK 280 CACODYLATE / HYDROCHLORIC ACID PH 6.0, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 115.57300 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 43.95000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 43.95000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 173.35950 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 43.95000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 43.95000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 57.78650 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 43.95000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.95000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 173.35950 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 43.95000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.95000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 57.78650 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 115.57300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 19380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 43360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -60.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 82 REMARK 465 LYS A 83 REMARK 465 PRO A 84 REMARK 465 GLY A 85 REMARK 465 MET A 86 REMARK 465 SER A 87 REMARK 465 ALA B 306 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 150 NE - CZ - NH1 ANGL. DEV. = 4.2 DEGREES REMARK 500 ARG A 150 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG B 150 NE - CZ - NH1 ANGL. DEV. = 5.6 DEGREES REMARK 500 ARG B 150 NE - CZ - NH2 ANGL. DEV. = -6.8 DEGREES REMARK 500 ASP B 228 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 89 -57.50 73.35 REMARK 500 ASN A 110 61.88 -117.92 REMARK 500 GLU A 192 12.23 -66.08 REMARK 500 THR A 219 -69.28 -132.25 REMARK 500 LYS A 251 -8.29 67.45 REMARK 500 PRO B 111 -74.60 -32.32 REMARK 500 THR B 219 -69.78 -136.65 REMARK 500 GLU B 250 65.02 30.94 REMARK 500 LYS B 251 53.20 -117.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ILE A 215 GLY A 216 -46.83 REMARK 500 GLU B 250 LYS B 251 -33.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAD A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ETX A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAD B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ETX B 402 DBREF1 6IHD A 2 306 UNP A0A088E2H7_9CREN DBREF2 6IHD A A0A088E2H7 2 306 DBREF1 6IHD B 2 306 UNP A0A088E2H7_9CREN DBREF2 6IHD B A0A088E2H7 2 306 SEQRES 1 A 305 ALA LYS VAL GLY PHE ILE GLY ALA GLY LYS ILE GLY GLN SEQRES 2 A 305 THR ILE ALA TYR SER ALA LEU VAL SER GLY ALA VAL ASP SEQRES 3 A 305 GLU ALA VAL ILE TYR ASP ILE ILE PRO GLU LEU PRO ASP SEQRES 4 A 305 LYS PHE GLU HIS GLU LEU ARG HIS ALA PHE ALA THR LYS SEQRES 5 A 305 GLY ILE LYS ALA ASN VAL LEU GLY THR ASN SER LEU ASP SEQRES 6 A 305 ASP VAL SER GLY MET ASP ILE VAL VAL ILE SER ALA GLY SEQRES 7 A 305 LYS PRO ARG LYS PRO GLY MET SER ARG ARG ASP LEU PHE SEQRES 8 A 305 VAL ASP ASN ALA LYS ILE MET ILE ASP LEU ALA GLN LYS SEQRES 9 A 305 LEU PRO SER LYS ASN PRO GLY ALA ILE TYR LEU MET VAL SEQRES 10 A 305 ALA ASN PRO VAL ASP MET MET ALA SER VAL PHE MET LYS SEQRES 11 A 305 TYR SER LYS GLN PHE THR ILE SER ALA GLY ASP GLN VAL SEQRES 12 A 305 GLU THR MET ARG MET ARG SER PHE ILE ALA LYS LYS LEU SEQRES 13 A 305 LYS ILE PRO VAL THR SER VAL ASP GLY PHE VAL GLY GLY SEQRES 14 A 305 GLU HIS GLY GLU ASP ALA VAL VAL LEU TRP SER THR VAL SEQRES 15 A 305 LYS ILE LYS GLY LYS PRO VAL ASP GLU PHE ASN ILE ASN SEQRES 16 A 305 LYS ASP GLU VAL SER ASP TYR VAL LYS LYS ILE PRO GLY SEQRES 17 A 305 GLU ILE ILE ARG VAL ILE GLY GLY THR THR TRP GLY PRO SEQRES 18 A 305 GLY THR ILE ILE ALA ASP ILE ILE LYS SER ILE ALA PHE SEQRES 19 A 305 SER GLU ASN ARG VAL MET SER ILE ALA THR PRO LYS GLU SEQRES 20 A 305 TYR GLU LYS GLU ILE ILE HIS VAL SER ALA PRO THR VAL SEQRES 21 A 305 VAL GLY SER SER ILE GLY PRO SER LEU GLU SER LEU LEU SEQRES 22 A 305 ASP GLU LYS ASP ARG TRP HIS LEU ASN SER ALA MET LYS SEQRES 23 A 305 ASP PHE TYR GLU ALA TYR LYS GLU ASN LEU LYS GLN LEU SEQRES 24 A 305 GLU GLN ALA THR LYS ALA SEQRES 1 B 305 ALA LYS VAL GLY PHE ILE GLY ALA GLY LYS ILE GLY GLN SEQRES 2 B 305 THR ILE ALA TYR SER ALA LEU VAL SER GLY ALA VAL ASP SEQRES 3 B 305 GLU ALA VAL ILE TYR ASP ILE ILE PRO GLU LEU PRO ASP SEQRES 4 B 305 LYS PHE GLU HIS GLU LEU ARG HIS ALA PHE ALA THR LYS SEQRES 5 B 305 GLY ILE LYS ALA ASN VAL LEU GLY THR ASN SER LEU ASP SEQRES 6 B 305 ASP VAL SER GLY MET ASP ILE VAL VAL ILE SER ALA GLY SEQRES 7 B 305 LYS PRO ARG LYS PRO GLY MET SER ARG ARG ASP LEU PHE SEQRES 8 B 305 VAL ASP ASN ALA LYS ILE MET ILE ASP LEU ALA GLN LYS SEQRES 9 B 305 LEU PRO SER LYS ASN PRO GLY ALA ILE TYR LEU MET VAL SEQRES 10 B 305 ALA ASN PRO VAL ASP MET MET ALA SER VAL PHE MET LYS SEQRES 11 B 305 TYR SER LYS GLN PHE THR ILE SER ALA GLY ASP GLN VAL SEQRES 12 B 305 GLU THR MET ARG MET ARG SER PHE ILE ALA LYS LYS LEU SEQRES 13 B 305 LYS ILE PRO VAL THR SER VAL ASP GLY PHE VAL GLY GLY SEQRES 14 B 305 GLU HIS GLY GLU ASP ALA VAL VAL LEU TRP SER THR VAL SEQRES 15 B 305 LYS ILE LYS GLY LYS PRO VAL ASP GLU PHE ASN ILE ASN SEQRES 16 B 305 LYS ASP GLU VAL SER ASP TYR VAL LYS LYS ILE PRO GLY SEQRES 17 B 305 GLU ILE ILE ARG VAL ILE GLY GLY THR THR TRP GLY PRO SEQRES 18 B 305 GLY THR ILE ILE ALA ASP ILE ILE LYS SER ILE ALA PHE SEQRES 19 B 305 SER GLU ASN ARG VAL MET SER ILE ALA THR PRO LYS GLU SEQRES 20 B 305 TYR GLU LYS GLU ILE ILE HIS VAL SER ALA PRO THR VAL SEQRES 21 B 305 VAL GLY SER SER ILE GLY PRO SER LEU GLU SER LEU LEU SEQRES 22 B 305 ASP GLU LYS ASP ARG TRP HIS LEU ASN SER ALA MET LYS SEQRES 23 B 305 ASP PHE TYR GLU ALA TYR LYS GLU ASN LEU LYS GLN LEU SEQRES 24 B 305 GLU GLN ALA THR LYS ALA HET NAD A 401 44 HET ETX A 402 6 HET NAD B 401 44 HET ETX B 402 6 HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM ETX 2-ETHOXYETHANOL FORMUL 3 NAD 2(C21 H27 N7 O14 P2) FORMUL 4 ETX 2(C4 H10 O2) FORMUL 7 HOH *64(H2 O) HELIX 1 AA1 GLY A 10 SER A 23 1 14 HELIX 2 AA2 GLU A 37 GLY A 54 1 18 HELIX 3 AA3 SER A 64 VAL A 68 5 5 HELIX 4 AA4 ARG A 89 ASN A 110 1 22 HELIX 5 AA5 PRO A 121 LYS A 134 1 14 HELIX 6 AA6 ASP A 142 LEU A 157 1 16 HELIX 7 AA7 PRO A 160 THR A 162 5 3 HELIX 8 AA8 HIS A 172 GLU A 174 5 3 HELIX 9 AA9 TRP A 180 THR A 182 5 3 HELIX 10 AB1 ASP A 191 PHE A 193 5 3 HELIX 11 AB2 ASN A 196 GLY A 216 1 21 HELIX 12 AB3 THR A 219 PHE A 235 1 17 HELIX 13 AB4 GLU A 271 LEU A 274 5 4 HELIX 14 AB5 ASP A 275 GLN A 302 1 28 HELIX 15 AB6 GLY B 10 SER B 23 1 14 HELIX 16 AB7 GLU B 37 GLY B 54 1 18 HELIX 17 AB8 SER B 64 VAL B 68 5 5 HELIX 18 AB9 SER B 87 ASN B 110 1 24 HELIX 19 AC1 PRO B 121 LYS B 134 1 14 HELIX 20 AC2 ASP B 142 LYS B 158 1 17 HELIX 21 AC3 PRO B 160 THR B 162 5 3 HELIX 22 AC4 HIS B 172 GLU B 174 5 3 HELIX 23 AC5 ASP B 191 PHE B 193 5 3 HELIX 24 AC6 ASN B 196 GLY B 216 1 21 HELIX 25 AC7 THR B 219 PHE B 235 1 17 HELIX 26 AC8 GLU B 271 LEU B 274 5 4 HELIX 27 AC9 ASP B 275 GLU B 301 1 27 SHEET 1 AA1 6 ASN A 58 THR A 62 0 SHEET 2 AA1 6 GLU A 28 TYR A 32 1 N ILE A 31 O LEU A 60 SHEET 3 AA1 6 LYS A 3 ILE A 7 1 N PHE A 6 O VAL A 30 SHEET 4 AA1 6 ILE A 73 ILE A 76 1 O VAL A 75 N ILE A 7 SHEET 5 AA1 6 ILE A 114 MET A 117 1 O LEU A 116 N VAL A 74 SHEET 6 AA1 6 THR A 137 SER A 139 1 O ILE A 138 N MET A 117 SHEET 1 AA2 3 VAL A 164 ASP A 165 0 SHEET 2 AA2 3 LYS A 184 ILE A 185 -1 O LYS A 184 N ASP A 165 SHEET 3 AA2 3 LYS A 188 PRO A 189 -1 O LYS A 188 N ILE A 185 SHEET 1 AA3 2 VAL A 168 GLY A 170 0 SHEET 2 AA3 2 ALA A 176 VAL A 178 -1 O VAL A 177 N GLY A 169 SHEET 1 AA4 3 ARG A 239 TYR A 249 0 SHEET 2 AA4 3 GLU A 252 VAL A 262 -1 O GLU A 252 N TYR A 249 SHEET 3 AA4 3 ILE A 266 SER A 269 -1 O GLY A 267 N VAL A 261 SHEET 1 AA5 6 ASN B 58 THR B 62 0 SHEET 2 AA5 6 GLU B 28 TYR B 32 1 N ILE B 31 O LEU B 60 SHEET 3 AA5 6 LYS B 3 ILE B 7 1 N PHE B 6 O TYR B 32 SHEET 4 AA5 6 ILE B 73 ILE B 76 1 O VAL B 75 N GLY B 5 SHEET 5 AA5 6 ILE B 114 MET B 117 1 O LEU B 116 N VAL B 74 SHEET 6 AA5 6 THR B 137 SER B 139 1 O ILE B 138 N MET B 117 SHEET 1 AA6 3 VAL B 164 GLY B 170 0 SHEET 2 AA6 3 ALA B 176 ILE B 185 -1 O VAL B 177 N GLY B 169 SHEET 3 AA6 3 LYS B 188 PRO B 189 -1 O LYS B 188 N ILE B 185 SHEET 1 AA7 3 ARG B 239 MET B 241 0 SHEET 2 AA7 3 THR B 260 VAL B 262 -1 O THR B 260 N MET B 241 SHEET 3 AA7 3 ILE B 266 SER B 269 -1 O PRO B 268 N VAL B 261 SHEET 1 AA8 2 ALA B 244 TYR B 249 0 SHEET 2 AA8 2 GLU B 252 SER B 257 -1 O GLU B 252 N TYR B 249 CISPEP 1 ASN A 120 PRO A 121 0 -5.61 CISPEP 2 GLY A 216 GLY A 217 0 26.95 CISPEP 3 GLY A 267 PRO A 268 0 6.57 CISPEP 4 ASN B 120 PRO B 121 0 -10.03 CISPEP 5 ILE B 266 GLY B 267 0 15.86 CISPEP 6 GLY B 267 PRO B 268 0 1.18 SITE 1 AC1 15 GLY A 10 LYS A 11 ILE A 12 TYR A 32 SITE 2 AC1 15 ASP A 33 ILE A 34 ILE A 35 SER A 77 SITE 3 AC1 15 ALA A 78 ILE A 98 VAL A 118 ALA A 119 SITE 4 AC1 15 ASN A 120 THR A 218 HOH A 511 SITE 1 AC2 8 ARG A 47 PHE A 50 ILE A 55 LYS A 56 SITE 2 AC2 8 HOH A 505 ILE B 159 PRO B 160 VAL B 161 SITE 1 AC3 21 GLY B 10 LYS B 11 ILE B 12 TYR B 32 SITE 2 AC3 21 ASP B 33 ILE B 34 ILE B 35 SER B 77 SITE 3 AC3 21 ALA B 78 LYS B 80 ARG B 82 ILE B 98 SITE 4 AC3 21 VAL B 118 ALA B 119 ASN B 120 THR B 218 SITE 5 AC3 21 PRO B 222 HOH B 518 HOH B 520 HOH B 522 SITE 6 AC3 21 HOH B 529 SITE 1 AC4 5 ASP B 165 PHE B 167 THR B 182 SER B 265 SITE 2 AC4 5 GLY B 267 CRYST1 87.900 87.900 231.146 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011377 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011377 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004326 0.00000