HEADER HYDROLASE 02-OCT-18 6IHT TITLE CRYSTAL STRUCTURE OF BACTERIAL SERINE PHOSPHATASE BOUND WITH TITLE 2 PHOSPHORYLATED PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHORYLATED PROTEIN PHOSPHATASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PROTEIN PHOSPHATASE,PROTEIN SERINE/THREONINE PHOSPHATASE COMPND 5 PRPC,REGULATION OF STATIONARY PHASE,PROTEIN-SERINE/THREONINE COMPND 6 PHOSPHATASE STP1,SERINE/THREONINE-PROTEIN PHOSPHATASE; COMPND 7 EC: 3.1.3.16; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: HIS12; COMPND 11 CHAIN: X; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 GENE: PRPC, PRPC_1, BN1321_240063, BTN44_06615, CSC83_01010, SOURCE 5 CSC87_08725, EP54_08495, EQ90_08165, ERS072840_01404, SOURCE 6 NCTC11940_01141, NCTC13131_00423, NCTC13196_02843, NCTC9944_01222, SOURCE 7 RK64_06500, SAMEA1469870_01594, SAMEA1531701_01402; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: PEPTIDE DISPLAY VECTOR FTH1; SOURCE 13 ORGANISM_TAXID: 160651 KEYWDS BACTERIA, PHOSPHATASE, METAL BINDING, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR C.-G.YANG,T.YANG REVDAT 3 22-NOV-23 6IHT 1 LINK REVDAT 2 21-AUG-19 6IHT 1 JRNL REVDAT 1 07-AUG-19 6IHT 0 JRNL AUTH T.YANG,T.LIU,J.GAN,K.YU,K.CHEN,W.XUE,L.LAN,S.YANG,C.G.YANG JRNL TITL STRUCTURAL INSIGHT INTO THE MECHANISM OF STAPHYLOCOCCUS JRNL TITL 2 AUREUS STP1 PHOSPHATASE. JRNL REF ACS INFECT DIS. V. 5 841 2019 JRNL REFN ESSN 2373-8227 JRNL PMID 30868877 JRNL DOI 10.1021/ACSINFECDIS.8B00316 REMARK 2 REMARK 2 RESOLUTION. 1.57 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.57 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.69 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.400 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 31676 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.160 REMARK 3 R VALUE (WORKING SET) : 0.159 REMARK 3 FREE R VALUE : 0.183 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.150 REMARK 3 FREE R VALUE TEST SET COUNT : 1630 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.7109 - 3.5911 0.96 2510 136 0.1713 0.1840 REMARK 3 2 3.5911 - 2.8505 0.98 2524 143 0.1570 0.1769 REMARK 3 3 2.8505 - 2.4902 0.99 2545 114 0.1668 0.1721 REMARK 3 4 2.4902 - 2.2625 0.99 2494 140 0.1573 0.2110 REMARK 3 5 2.2625 - 2.1003 0.99 2502 140 0.1544 0.1863 REMARK 3 6 2.1003 - 1.9765 1.00 2530 139 0.1458 0.1757 REMARK 3 7 1.9765 - 1.8775 1.00 2507 138 0.1459 0.1581 REMARK 3 8 1.8775 - 1.7958 1.00 2499 134 0.1449 0.1790 REMARK 3 9 1.7958 - 1.7267 1.00 2527 138 0.1467 0.1855 REMARK 3 10 1.7267 - 1.6671 1.00 2468 155 0.1507 0.1848 REMARK 3 11 1.6671 - 1.6149 1.00 2513 136 0.1587 0.2117 REMARK 3 12 1.6149 - 1.5688 0.95 2427 117 0.1644 0.2091 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.120 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.100 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.013 1996 REMARK 3 ANGLE : 1.290 2701 REMARK 3 CHIRALITY : 0.084 300 REMARK 3 PLANARITY : 0.009 357 REMARK 3 DIHEDRAL : 14.925 1191 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESSEQ 1:241) REMARK 3 ORIGIN FOR THE GROUP (A): -3.8875 2.7017 79.0197 REMARK 3 T TENSOR REMARK 3 T11: 0.0976 T22: 0.0997 REMARK 3 T33: 0.1023 T12: 0.0027 REMARK 3 T13: -0.0002 T23: 0.0014 REMARK 3 L TENSOR REMARK 3 L11: 1.4024 L22: 0.9001 REMARK 3 L33: 1.7153 L12: -0.1126 REMARK 3 L13: 0.0569 L23: -0.0919 REMARK 3 S TENSOR REMARK 3 S11: -0.0124 S12: -0.1825 S13: -0.0386 REMARK 3 S21: 0.0869 S22: 0.0038 S23: -0.0262 REMARK 3 S31: 0.0281 S32: -0.0117 S33: 0.0034 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN X AND RESSEQ 1:3) REMARK 3 ORIGIN FOR THE GROUP (A): -17.4534 2.5437 81.6790 REMARK 3 T TENSOR REMARK 3 T11: 0.3011 T22: 0.4968 REMARK 3 T33: 0.4396 T12: 0.1300 REMARK 3 T13: 0.0726 T23: 0.0468 REMARK 3 L TENSOR REMARK 3 L11: 2.7551 L22: 1.3244 REMARK 3 L33: 1.5184 L12: 1.2459 REMARK 3 L13: 0.9503 L23: 1.3816 REMARK 3 S TENSOR REMARK 3 S11: -0.8187 S12: -1.2448 S13: 0.0024 REMARK 3 S21: 1.6548 S22: 1.1853 S23: 2.9679 REMARK 3 S31: -0.8007 S32: -2.1500 S33: -0.3553 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6IHT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-OCT-18. REMARK 100 THE DEPOSITION ID IS D_1300009213. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-DEC-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9735 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31706 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.569 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : 0.08700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 39.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.57 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.63 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.37000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5F1M REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 34.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.05 M MGCL2, 0.1 M HEPES (PH=7.5), REMARK 280 30% PEG 3350., VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 19.30450 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -43.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, X REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 GLY A -19 REMARK 465 SER A -18 REMARK 465 SER A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 SER A -10 REMARK 465 SER A -9 REMARK 465 GLY A -8 REMARK 465 LEU A -7 REMARK 465 VAL A -6 REMARK 465 PRO A -5 REMARK 465 ARG A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 GLY A 242 REMARK 465 ASP A 243 REMARK 465 LYS A 244 REMARK 465 VAL A 245 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 199 CD CE NZ REMARK 470 LYS A 209 CE NZ REMARK 470 GLU A 210 CD OE1 OE2 REMARK 470 GLU A 241 C O CB CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS A 230 O HOH A 401 2.09 REMARK 500 OE1 GLU A 1 O HOH A 402 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 17 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 16 OE2 REMARK 620 2 HOH A 412 O 86.7 REMARK 620 3 HOH A 429 O 89.9 94.5 REMARK 620 4 HOH A 484 O 93.8 90.6 173.8 REMARK 620 5 HOH A 521 O 92.2 174.2 91.2 83.7 REMARK 620 6 HOH A 543 O 173.7 87.7 87.6 89.2 93.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 303 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 35 OD2 REMARK 620 2 ASP A 192 OD1 88.1 REMARK 620 3 ASP A 231 OD2 169.4 89.7 REMARK 620 4 HOH A 462 O 84.0 103.6 86.5 REMARK 620 5 SEP X 3 O2P 100.0 164.6 84.6 90.3 REMARK 620 6 SEP X 3 O3P 94.3 98.8 96.3 157.5 67.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 304 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 35 OD1 REMARK 620 2 GLY A 36 O 90.5 REMARK 620 3 HOH A 428 O 83.0 108.7 REMARK 620 4 HOH A 457 O 169.1 84.5 89.5 REMARK 620 5 SEP X 3 O1P 93.7 85.5 165.4 95.5 REMARK 620 6 SEP X 3 O2P 94.6 156.5 94.6 93.8 71.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 305 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 118 OD2 REMARK 620 2 ASP A 192 OD2 96.5 REMARK 620 3 HOH A 418 O 170.2 89.4 REMARK 620 4 HOH A 427 O 86.3 174.2 88.5 REMARK 620 5 HOH A 440 O 87.3 97.2 84.2 88.0 REMARK 620 6 HOH A 452 O 94.4 85.9 93.7 88.8 176.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 185 OD1 REMARK 620 2 HOH A 404 O 67.4 REMARK 620 3 HOH A 435 O 159.0 92.4 REMARK 620 4 HOH A 438 O 116.2 175.6 84.3 REMARK 620 5 HOH A 449 O 78.3 80.6 93.6 102.3 REMARK 620 6 HOH A 473 O 89.1 92.0 97.4 85.6 167.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 306 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR A 186 OH REMARK 620 2 LEU A 207 O 97.8 REMARK 620 3 LYS A 209 O 165.9 95.1 REMARK 620 4 HIS A 216 NE2 87.2 96.9 85.4 REMARK 620 5 HOH A 478 O 82.0 173.2 86.0 89.9 REMARK 620 6 HOH A 529 O 88.9 92.5 96.4 170.3 80.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 306 DBREF 6IHT A 1 245 UNP Q9RL81 Q9RL81_STAAU 3 247 DBREF 6IHT X 1 3 PDB 6IHT 6IHT 1 3 SEQADV 6IHT MET A -20 UNP Q9RL81 INITIATING METHIONINE SEQADV 6IHT GLY A -19 UNP Q9RL81 EXPRESSION TAG SEQADV 6IHT SER A -18 UNP Q9RL81 EXPRESSION TAG SEQADV 6IHT SER A -17 UNP Q9RL81 EXPRESSION TAG SEQADV 6IHT HIS A -16 UNP Q9RL81 EXPRESSION TAG SEQADV 6IHT HIS A -15 UNP Q9RL81 EXPRESSION TAG SEQADV 6IHT HIS A -14 UNP Q9RL81 EXPRESSION TAG SEQADV 6IHT HIS A -13 UNP Q9RL81 EXPRESSION TAG SEQADV 6IHT HIS A -12 UNP Q9RL81 EXPRESSION TAG SEQADV 6IHT HIS A -11 UNP Q9RL81 EXPRESSION TAG SEQADV 6IHT SER A -10 UNP Q9RL81 EXPRESSION TAG SEQADV 6IHT SER A -9 UNP Q9RL81 EXPRESSION TAG SEQADV 6IHT GLY A -8 UNP Q9RL81 EXPRESSION TAG SEQADV 6IHT LEU A -7 UNP Q9RL81 EXPRESSION TAG SEQADV 6IHT VAL A -6 UNP Q9RL81 EXPRESSION TAG SEQADV 6IHT PRO A -5 UNP Q9RL81 EXPRESSION TAG SEQADV 6IHT ARG A -4 UNP Q9RL81 EXPRESSION TAG SEQADV 6IHT GLY A -3 UNP Q9RL81 EXPRESSION TAG SEQADV 6IHT SER A -2 UNP Q9RL81 EXPRESSION TAG SEQADV 6IHT HIS A -1 UNP Q9RL81 EXPRESSION TAG SEQADV 6IHT MET A 0 UNP Q9RL81 EXPRESSION TAG SEQRES 1 A 266 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 266 LEU VAL PRO ARG GLY SER HIS MET GLU ALA GLN PHE PHE SEQRES 3 A 266 THR ASP THR GLY GLN HIS ARG ASP LYS ASN GLU ASP ALA SEQRES 4 A 266 GLY GLY ILE PHE TYR ASN GLN THR ASN GLN GLN LEU LEU SEQRES 5 A 266 VAL LEU CYS ASP GLY MET GLY GLY HIS LYS ALA GLY GLU SEQRES 6 A 266 VAL ALA SER LYS PHE VAL THR ASP GLU LEU LYS SER ARG SEQRES 7 A 266 PHE GLU ALA GLU ASN LEU ILE GLU GLN HIS GLN ALA GLU SEQRES 8 A 266 ASN TRP LEU ARG ASN ASN ILE LYS ASP ILE ASN PHE GLN SEQRES 9 A 266 LEU TYR HIS TYR ALA GLN GLU ASN ALA GLU TYR LYS GLY SEQRES 10 A 266 MET GLY THR THR CYS VAL CYS ALA LEU VAL PHE GLU LYS SEQRES 11 A 266 SER VAL VAL ILE ALA ASN VAL GLY ASP SER ARG ALA TYR SEQRES 12 A 266 VAL ILE ASN SER ARG GLN ILE GLU GLN ILE THR SER ASP SEQRES 13 A 266 HIS SER PHE VAL ASN HIS LEU VAL LEU THR GLY GLN ILE SEQRES 14 A 266 THR PRO GLU GLU ALA PHE THR HIS PRO GLN ARG ASN ILE SEQRES 15 A 266 ILE THR LYS VAL MET GLY THR ASP LYS ARG VAL SER PRO SEQRES 16 A 266 ASP LEU PHE ILE LYS ARG LEU ASN PHE TYR ASP TYR LEU SEQRES 17 A 266 LEU LEU ASN SER ASP GLY LEU THR ASP TYR VAL LYS ASP SEQRES 18 A 266 ASN GLU ILE LYS ARG LEU LEU VAL LYS GLU GLY THR ILE SEQRES 19 A 266 GLU ASP HIS GLY ASP GLN LEU MET GLN LEU ALA LEU ASP SEQRES 20 A 266 ASN HIS SER LYS ASP ASN VAL THR PHE ILE LEU ALA ALA SEQRES 21 A 266 ILE GLU GLY ASP LYS VAL SEQRES 1 X 3 GLY GLY SEP HET SEP X 3 11 HET MG A 301 1 HET MG A 302 1 HET MN A 303 1 HET MN A 304 1 HET MN A 305 1 HET MN A 306 1 HETNAM SEP PHOSPHOSERINE HETNAM MG MAGNESIUM ION HETNAM MN MANGANESE (II) ION HETSYN SEP PHOSPHONOSERINE FORMUL 2 SEP C3 H8 N O6 P FORMUL 3 MG 2(MG 2+) FORMUL 5 MN 4(MN 2+) FORMUL 9 HOH *153(H2 O) HELIX 1 AA1 ALA A 42 ALA A 60 1 19 HELIX 2 AA2 GLU A 65 ASN A 91 1 27 HELIX 3 AA3 ALA A 92 LYS A 95 5 4 HELIX 4 AA4 SER A 137 THR A 145 1 9 HELIX 5 AA5 THR A 149 PHE A 154 1 6 HELIX 6 AA6 SER A 191 ASP A 196 1 6 HELIX 7 AA7 LYS A 199 VAL A 208 1 10 HELIX 8 AA8 THR A 212 ASN A 227 1 16 SHEET 1 AA1 5 GLU A 1 ASP A 7 0 SHEET 2 AA1 5 VAL A 233 ALA A 239 -1 O ALA A 239 N GLU A 1 SHEET 3 AA1 5 TYR A 186 ASN A 190 -1 N LEU A 187 O ALA A 238 SHEET 4 AA1 5 ARG A 120 ILE A 124 -1 N TYR A 122 O LEU A 188 SHEET 5 AA1 5 ILE A 129 GLN A 131 -1 O GLU A 130 N VAL A 123 SHEET 1 AA2 5 ASP A 17 TYR A 23 0 SHEET 2 AA2 5 GLN A 29 ASP A 35 -1 O CYS A 34 N ALA A 18 SHEET 3 AA2 5 CYS A 101 VAL A 106 -1 O ALA A 104 N LEU A 31 SHEET 4 AA2 5 SER A 110 VAL A 116 -1 O VAL A 116 N CYS A 101 SHEET 5 AA2 5 ASP A 175 ARG A 180 -1 O PHE A 177 N ILE A 113 LINK C GLY X 2 N SEP X 3 1555 1555 1.34 LINK OE2 GLU A 16 MG MG A 301 1555 1555 2.02 LINK OD2 ASP A 35 MN MN A 303 1555 1555 2.15 LINK OD1 ASP A 35 MN MN A 304 1555 1555 2.06 LINK O GLY A 36 MN MN A 304 1555 1555 2.03 LINK OD2 ASP A 118 MN MN A 305 1555 1555 1.99 LINK OD1 ASP A 185 MG MG A 302 1555 1555 2.30 LINK OH TYR A 186 MN MN A 306 1555 1555 2.28 LINK OD1 ASP A 192 MN MN A 303 1555 1555 2.09 LINK OD2 ASP A 192 MN MN A 305 1555 1555 2.08 LINK O LEU A 207 MN MN A 306 1555 1555 2.24 LINK O LYS A 209 MN MN A 306 1555 1555 2.21 LINK NE2 HIS A 216 MN MN A 306 1555 1555 2.33 LINK OD2 ASP A 231 MN MN A 303 1555 1555 2.15 LINK MG MG A 301 O HOH A 412 1555 1555 2.18 LINK MG MG A 301 O HOH A 429 1555 1555 2.05 LINK MG MG A 301 O HOH A 484 1555 1555 2.08 LINK MG MG A 301 O HOH A 521 1555 1555 2.12 LINK MG MG A 301 O HOH A 543 1555 1555 2.16 LINK MG MG A 302 O HOH A 404 1555 1555 1.99 LINK MG MG A 302 O HOH A 435 1555 2648 2.02 LINK MG MG A 302 O HOH A 438 1555 1555 2.15 LINK MG MG A 302 O HOH A 449 1555 1555 2.01 LINK MG MG A 302 O HOH A 473 1555 1555 2.27 LINK MN MN A 303 O HOH A 462 1555 1555 2.24 LINK MN MN A 303 O2P SEP X 3 1555 1555 2.40 LINK MN MN A 303 O3P SEP X 3 1555 1555 2.25 LINK MN MN A 304 O HOH A 428 1555 1555 2.06 LINK MN MN A 304 O HOH A 457 1555 1555 2.11 LINK MN MN A 304 O1P SEP X 3 1555 1555 2.08 LINK MN MN A 304 O2P SEP X 3 1555 1555 2.10 LINK MN MN A 305 O HOH A 418 1555 1555 2.08 LINK MN MN A 305 O HOH A 427 1555 1555 2.14 LINK MN MN A 305 O HOH A 440 1555 1555 2.15 LINK MN MN A 305 O HOH A 452 1555 1555 2.12 LINK MN MN A 306 O HOH A 478 1555 2648 2.18 LINK MN MN A 306 O HOH A 529 1555 1555 2.04 SITE 1 AC1 6 GLU A 16 HOH A 412 HOH A 429 HOH A 484 SITE 2 AC1 6 HOH A 521 HOH A 543 SITE 1 AC2 5 ASP A 185 HOH A 404 HOH A 438 HOH A 449 SITE 2 AC2 5 HOH A 473 SITE 1 AC3 5 ASP A 35 ASP A 192 ASP A 231 HOH A 462 SITE 2 AC3 5 SEP X 3 SITE 1 AC4 5 ASP A 35 GLY A 36 HOH A 428 HOH A 457 SITE 2 AC4 5 SEP X 3 SITE 1 AC5 6 ASP A 118 ASP A 192 HOH A 418 HOH A 427 SITE 2 AC5 6 HOH A 440 HOH A 452 SITE 1 AC6 5 TYR A 186 LEU A 207 LYS A 209 HIS A 216 SITE 2 AC6 5 HOH A 529 CRYST1 46.693 38.609 65.003 90.00 101.89 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021416 0.000000 0.004508 0.00000 SCALE2 0.000000 0.025901 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015721 0.00000