HEADER HYDROLASE 07-OCT-18 6IIN TITLE USP14 CATALYTIC DOMAIN WITH IU1-248 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 14; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: CATALYTIC DOMAIN; COMPND 5 SYNONYM: DEUBIQUITINATING ENZYME 14,UBIQUITIN THIOESTERASE 14, COMPND 6 UBIQUITIN-SPECIFIC-PROCESSING PROTEASE 14; COMPND 7 EC: 3.4.19.12; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: USP14, TGT; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS USP14 INHIBITOR COMPLEX, STRUCTURAL PROTEIN, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Z.Q.MEI,J.W.WANG,F.WANG,Y.W.WANG REVDAT 2 27-MAR-24 6IIN 1 REMARK REVDAT 1 19-DEC-18 6IIN 0 JRNL AUTH Y.WANG,Y.JIANG,S.DING,J.LI,N.SONG,Y.REN,D.HONG,C.WU,B.LI, JRNL AUTH 2 F.WANG,W.HE,J.WANG,Z.MEI JRNL TITL SMALL MOLECULE INHIBITORS REVEAL ALLOSTERIC REGULATION OF JRNL TITL 2 USP14 VIA STERIC BLOCKADE. JRNL REF CELL RES. V. 28 1186 2018 JRNL REFN ISSN 1748-7838 JRNL PMID 30254335 JRNL DOI 10.1038/S41422-018-0091-X REMARK 2 REMARK 2 RESOLUTION. 2.53 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8_1069 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.53 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.25 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 33924 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.264 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 1713 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.0875 - 5.7766 0.97 2842 137 0.1947 0.2178 REMARK 3 2 5.7766 - 4.5875 0.99 2754 153 0.1861 0.2096 REMARK 3 3 4.5875 - 4.0084 0.98 2718 143 0.1786 0.2451 REMARK 3 4 4.0084 - 3.6422 0.99 2727 127 0.1975 0.2777 REMARK 3 5 3.6422 - 3.3813 0.98 2659 161 0.2151 0.2579 REMARK 3 6 3.3813 - 3.1820 0.99 2716 130 0.2313 0.3244 REMARK 3 7 3.1820 - 3.0228 0.99 2686 130 0.2411 0.3028 REMARK 3 8 3.0228 - 2.8912 0.99 2675 157 0.2357 0.3042 REMARK 3 9 2.8912 - 2.7800 0.99 2661 166 0.2387 0.2876 REMARK 3 10 2.7800 - 2.6841 1.00 2705 135 0.2746 0.3589 REMARK 3 11 2.6841 - 2.6001 0.99 2683 143 0.2741 0.3491 REMARK 3 12 2.6001 - 2.5258 0.89 2385 131 0.2955 0.3483 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.590 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 5543 REMARK 3 ANGLE : 0.886 7467 REMARK 3 CHIRALITY : 0.055 814 REMARK 3 PLANARITY : 0.003 953 REMARK 3 DIHEDRAL : 14.450 2096 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): 19.8793 -1.6952 -0.5431 REMARK 3 T TENSOR REMARK 3 T11: 0.2601 T22: 0.3526 REMARK 3 T33: 0.2173 T12: -0.0145 REMARK 3 T13: 0.0018 T23: -0.0074 REMARK 3 L TENSOR REMARK 3 L11: 3.3401 L22: 1.2227 REMARK 3 L33: 1.8394 L12: -0.2707 REMARK 3 L13: 0.1863 L23: -0.1595 REMARK 3 S TENSOR REMARK 3 S11: -0.0627 S12: 0.3390 S13: 0.1260 REMARK 3 S21: -0.1858 S22: 0.0183 S23: 0.0458 REMARK 3 S31: 0.0732 S32: -0.0654 S33: 0.0471 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): -19.8815 -3.3441 -35.5590 REMARK 3 T TENSOR REMARK 3 T11: 0.3034 T22: 0.5832 REMARK 3 T33: 0.3154 T12: -0.0314 REMARK 3 T13: -0.0120 T23: 0.1222 REMARK 3 L TENSOR REMARK 3 L11: 4.6379 L22: 1.3048 REMARK 3 L33: 2.4490 L12: -0.3563 REMARK 3 L13: 0.0796 L23: 0.2069 REMARK 3 S TENSOR REMARK 3 S11: -0.1231 S12: -0.7019 S13: -0.4026 REMARK 3 S21: 0.1977 S22: 0.1094 S23: 0.0641 REMARK 3 S31: 0.1530 S32: -0.1861 S33: 0.0287 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6IIN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-OCT-18. REMARK 100 THE DEPOSITION ID IS D_1300009270. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-NOV-12 REMARK 200 TEMPERATURE (KELVIN) : 77 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.984 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33924 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.530 REMARK 200 RESOLUTION RANGE LOW (A) : 36.250 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.9300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.53 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.62 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.87 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, NH4F, CSCL, GLYCINE, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 40.90450 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 59.13550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 52.17550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 59.13550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 40.90450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 52.17550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1470 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31390 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 220 REMARK 465 ASP A 221 REMARK 465 SER A 222 REMARK 465 VAL A 223 REMARK 465 LYS A 224 REMARK 465 GLU A 225 REMARK 465 THR A 226 REMARK 465 ASP A 227 REMARK 465 SER A 228 REMARK 465 SER A 229 REMARK 465 SER A 230 REMARK 465 ALA A 231 REMARK 465 SER A 232 REMARK 465 ALA A 233 REMARK 465 ALA A 234 REMARK 465 THR A 235 REMARK 465 PRO A 236 REMARK 465 SER A 237 REMARK 465 LYS A 238 REMARK 465 LYS A 239 REMARK 465 LYS A 334 REMARK 465 GLU A 335 REMARK 465 LYS A 336 REMARK 465 GLU A 337 REMARK 465 SER A 338 REMARK 465 VAL A 339 REMARK 465 GLU A 378 REMARK 465 ASP A 379 REMARK 465 LYS A 380 REMARK 465 LYS A 381 REMARK 465 VAL A 382 REMARK 465 ASN A 383 REMARK 465 GLN A 384 REMARK 465 GLN A 385 REMARK 465 PRO A 386 REMARK 465 ASN A 387 REMARK 465 THR A 388 REMARK 465 SER A 389 REMARK 465 ASP A 390 REMARK 465 LYS A 391 REMARK 465 LYS A 392 REMARK 465 SER A 393 REMARK 465 SER A 394 REMARK 465 PRO A 395 REMARK 465 GLN A 396 REMARK 465 LYS A 397 REMARK 465 GLU A 398 REMARK 465 VAL A 399 REMARK 465 LYS A 400 REMARK 465 ASP B 220 REMARK 465 ASP B 221 REMARK 465 SER B 222 REMARK 465 VAL B 223 REMARK 465 LYS B 224 REMARK 465 GLU B 225 REMARK 465 THR B 226 REMARK 465 ASP B 227 REMARK 465 SER B 228 REMARK 465 SER B 229 REMARK 465 SER B 230 REMARK 465 ALA B 231 REMARK 465 SER B 232 REMARK 465 ALA B 233 REMARK 465 ALA B 234 REMARK 465 THR B 235 REMARK 465 PRO B 236 REMARK 465 SER B 237 REMARK 465 LYS B 238 REMARK 465 LYS B 239 REMARK 465 LYS B 334 REMARK 465 GLU B 335 REMARK 465 LYS B 336 REMARK 465 GLU B 337 REMARK 465 SER B 338 REMARK 465 VAL B 339 REMARK 465 GLU B 378 REMARK 465 ASP B 379 REMARK 465 LYS B 380 REMARK 465 LYS B 381 REMARK 465 VAL B 382 REMARK 465 ASN B 383 REMARK 465 GLN B 384 REMARK 465 GLN B 385 REMARK 465 PRO B 386 REMARK 465 ASN B 387 REMARK 465 THR B 388 REMARK 465 SER B 389 REMARK 465 ASP B 390 REMARK 465 LYS B 391 REMARK 465 LYS B 392 REMARK 465 SER B 393 REMARK 465 SER B 394 REMARK 465 PRO B 395 REMARK 465 GLN B 396 REMARK 465 LYS B 397 REMARK 465 GLU B 398 REMARK 465 VAL B 399 REMARK 465 LYS B 400 REMARK 465 TYR B 401 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 101 CG SD CE REMARK 470 TYR A 333 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASN A 340 CG OD1 ND2 REMARK 470 MET B 101 CG SD CE REMARK 470 PHE B 332 CG CD1 CD2 CE1 CE2 CZ REMARK 470 VAL B 485 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 354 O HOH A 601 1.92 REMARK 500 OG SER A 276 O HOH A 602 2.05 REMARK 500 O HOH A 630 O HOH A 636 2.10 REMARK 500 OG SER B 456 O HOH B 601 2.10 REMARK 500 O HOH A 635 O HOH A 657 2.14 REMARK 500 OD1 ASP A 161 O HOH A 603 2.18 REMARK 500 O PRO B 321 OH TYR B 418 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 631 O HOH B 635 2455 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 145 -72.00 -66.16 REMARK 500 SER A 168 -100.14 -101.01 REMARK 500 ARG A 330 59.32 -99.05 REMARK 500 GLU A 402 116.32 65.65 REMARK 500 ASP A 452 -113.42 55.34 REMARK 500 ALA B 139 130.88 -172.02 REMARK 500 SER B 168 -93.66 -96.61 REMARK 500 SER B 260 108.71 -166.09 REMARK 500 GLU B 282 -2.56 70.27 REMARK 500 LYS B 300 -86.10 -154.02 REMARK 500 ARG B 307 -155.52 -164.78 REMARK 500 SER B 433 -158.36 -155.46 REMARK 500 ASP B 451 74.76 -103.00 REMARK 500 ASP B 452 -113.40 56.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue A8O A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue A8O B 501 DBREF 6IIN A 101 485 UNP P54578 UBP14_HUMAN 101 485 DBREF 6IIN B 101 485 UNP P54578 UBP14_HUMAN 101 485 SEQRES 1 A 385 MET GLU LEU PRO CYS GLY LEU THR ASN LEU GLY ASN THR SEQRES 2 A 385 CYS TYR MET ASN ALA THR VAL GLN CYS ILE ARG SER VAL SEQRES 3 A 385 PRO GLU LEU LYS ASP ALA LEU LYS ARG TYR ALA GLY ALA SEQRES 4 A 385 LEU ARG ALA SER GLY GLU MET ALA SER ALA GLN TYR ILE SEQRES 5 A 385 THR ALA ALA LEU ARG ASP LEU PHE ASP SER MET ASP LYS SEQRES 6 A 385 THR SER SER SER ILE PRO PRO ILE ILE LEU LEU GLN PHE SEQRES 7 A 385 LEU HIS MET ALA PHE PRO GLN PHE ALA GLU LYS GLY GLU SEQRES 8 A 385 GLN GLY GLN TYR LEU GLN GLN ASP ALA ASN GLU CYS TRP SEQRES 9 A 385 ILE GLN MET MET ARG VAL LEU GLN GLN LYS LEU GLU ALA SEQRES 10 A 385 ILE GLU ASP ASP SER VAL LYS GLU THR ASP SER SER SER SEQRES 11 A 385 ALA SER ALA ALA THR PRO SER LYS LYS LYS SER LEU ILE SEQRES 12 A 385 ASP GLN PHE PHE GLY VAL GLU PHE GLU THR THR MET LYS SEQRES 13 A 385 CYS THR GLU SER GLU GLU GLU GLU VAL THR LYS GLY LYS SEQRES 14 A 385 GLU ASN GLN LEU GLN LEU SER CYS PHE ILE ASN GLN GLU SEQRES 15 A 385 VAL LYS TYR LEU PHE THR GLY LEU LYS LEU ARG LEU GLN SEQRES 16 A 385 GLU GLU ILE THR LYS GLN SER PRO THR LEU GLN ARG ASN SEQRES 17 A 385 ALA LEU TYR ILE LYS SER SER LYS ILE SER ARG LEU PRO SEQRES 18 A 385 ALA TYR LEU THR ILE GLN MET VAL ARG PHE PHE TYR LYS SEQRES 19 A 385 GLU LYS GLU SER VAL ASN ALA LYS VAL LEU LYS ASP VAL SEQRES 20 A 385 LYS PHE PRO LEU MET LEU ASP MET TYR GLU LEU CYS THR SEQRES 21 A 385 PRO GLU LEU GLN GLU LYS MET VAL SER PHE ARG SER LYS SEQRES 22 A 385 PHE LYS ASP LEU GLU ASP LYS LYS VAL ASN GLN GLN PRO SEQRES 23 A 385 ASN THR SER ASP LYS LYS SER SER PRO GLN LYS GLU VAL SEQRES 24 A 385 LYS TYR GLU PRO PHE SER PHE ALA ASP ASP ILE GLY SER SEQRES 25 A 385 ASN ASN CYS GLY TYR TYR ASP LEU GLN ALA VAL LEU THR SEQRES 26 A 385 HIS GLN GLY ARG SER SER SER SER GLY HIS TYR VAL SER SEQRES 27 A 385 TRP VAL LYS ARG LYS GLN ASP GLU TRP ILE LYS PHE ASP SEQRES 28 A 385 ASP ASP LYS VAL SER ILE VAL THR PRO GLU ASP ILE LEU SEQRES 29 A 385 ARG LEU SER GLY GLY GLY ASP TRP HIS ILE ALA TYR VAL SEQRES 30 A 385 LEU LEU TYR GLY PRO ARG ARG VAL SEQRES 1 B 385 MET GLU LEU PRO CYS GLY LEU THR ASN LEU GLY ASN THR SEQRES 2 B 385 CYS TYR MET ASN ALA THR VAL GLN CYS ILE ARG SER VAL SEQRES 3 B 385 PRO GLU LEU LYS ASP ALA LEU LYS ARG TYR ALA GLY ALA SEQRES 4 B 385 LEU ARG ALA SER GLY GLU MET ALA SER ALA GLN TYR ILE SEQRES 5 B 385 THR ALA ALA LEU ARG ASP LEU PHE ASP SER MET ASP LYS SEQRES 6 B 385 THR SER SER SER ILE PRO PRO ILE ILE LEU LEU GLN PHE SEQRES 7 B 385 LEU HIS MET ALA PHE PRO GLN PHE ALA GLU LYS GLY GLU SEQRES 8 B 385 GLN GLY GLN TYR LEU GLN GLN ASP ALA ASN GLU CYS TRP SEQRES 9 B 385 ILE GLN MET MET ARG VAL LEU GLN GLN LYS LEU GLU ALA SEQRES 10 B 385 ILE GLU ASP ASP SER VAL LYS GLU THR ASP SER SER SER SEQRES 11 B 385 ALA SER ALA ALA THR PRO SER LYS LYS LYS SER LEU ILE SEQRES 12 B 385 ASP GLN PHE PHE GLY VAL GLU PHE GLU THR THR MET LYS SEQRES 13 B 385 CYS THR GLU SER GLU GLU GLU GLU VAL THR LYS GLY LYS SEQRES 14 B 385 GLU ASN GLN LEU GLN LEU SER CYS PHE ILE ASN GLN GLU SEQRES 15 B 385 VAL LYS TYR LEU PHE THR GLY LEU LYS LEU ARG LEU GLN SEQRES 16 B 385 GLU GLU ILE THR LYS GLN SER PRO THR LEU GLN ARG ASN SEQRES 17 B 385 ALA LEU TYR ILE LYS SER SER LYS ILE SER ARG LEU PRO SEQRES 18 B 385 ALA TYR LEU THR ILE GLN MET VAL ARG PHE PHE TYR LYS SEQRES 19 B 385 GLU LYS GLU SER VAL ASN ALA LYS VAL LEU LYS ASP VAL SEQRES 20 B 385 LYS PHE PRO LEU MET LEU ASP MET TYR GLU LEU CYS THR SEQRES 21 B 385 PRO GLU LEU GLN GLU LYS MET VAL SER PHE ARG SER LYS SEQRES 22 B 385 PHE LYS ASP LEU GLU ASP LYS LYS VAL ASN GLN GLN PRO SEQRES 23 B 385 ASN THR SER ASP LYS LYS SER SER PRO GLN LYS GLU VAL SEQRES 24 B 385 LYS TYR GLU PRO PHE SER PHE ALA ASP ASP ILE GLY SER SEQRES 25 B 385 ASN ASN CYS GLY TYR TYR ASP LEU GLN ALA VAL LEU THR SEQRES 26 B 385 HIS GLN GLY ARG SER SER SER SER GLY HIS TYR VAL SER SEQRES 27 B 385 TRP VAL LYS ARG LYS GLN ASP GLU TRP ILE LYS PHE ASP SEQRES 28 B 385 ASP ASP LYS VAL SER ILE VAL THR PRO GLU ASP ILE LEU SEQRES 29 B 385 ARG LEU SER GLY GLY GLY ASP TRP HIS ILE ALA TYR VAL SEQRES 30 B 385 LEU LEU TYR GLY PRO ARG ARG VAL HET A8O A 501 25 HET A8O B 501 25 HETNAM A8O 4-{3-[(4-HYDROXYPIPERIDIN-1-YL)ACETYL]-2,5-DIMETHYL-1H- HETNAM 2 A8O PYRROL-1-YL}BENZONITRILE FORMUL 3 A8O 2(C20 H23 N3 O2) FORMUL 5 HOH *104(H2 O) HELIX 1 AA1 THR A 113 SER A 125 1 13 HELIX 2 AA2 VAL A 126 ARG A 135 1 10 HELIX 3 AA3 MET A 146 THR A 166 1 21 HELIX 4 AA4 PRO A 172 PHE A 183 1 12 HELIX 5 AA5 ASP A 199 LEU A 215 1 17 HELIX 6 AA6 SER A 241 GLY A 248 1 8 HELIX 7 AA7 TYR A 285 LEU A 294 1 10 HELIX 8 AA8 TYR A 356 CYS A 359 5 4 HELIX 9 AA9 THR A 360 SER A 372 1 13 HELIX 10 AB1 THR A 459 ARG A 465 1 7 HELIX 11 AB2 LEU A 466 GLY A 468 5 3 HELIX 12 AB3 THR B 113 SER B 125 1 13 HELIX 13 AB4 VAL B 126 TYR B 136 1 11 HELIX 14 AB5 MET B 146 THR B 166 1 21 HELIX 15 AB6 PRO B 172 PHE B 183 1 12 HELIX 16 AB7 PRO B 184 GLU B 188 5 5 HELIX 17 AB8 ASP B 199 LEU B 215 1 17 HELIX 18 AB9 SER B 241 GLY B 248 1 8 HELIX 19 AC1 TYR B 285 LEU B 294 1 10 HELIX 20 AC2 TYR B 356 CYS B 359 5 4 HELIX 21 AC3 THR B 360 LYS B 375 1 16 HELIX 22 AC4 THR B 459 ARG B 465 1 7 SHEET 1 AA1 2 GLY A 106 LEU A 107 0 SHEET 2 AA1 2 SER A 169 ILE A 170 1 O ILE A 170 N GLY A 106 SHEET 1 AA2 4 THR A 266 GLN A 272 0 SHEET 2 AA2 4 VAL A 249 CYS A 257 -1 N VAL A 249 O GLN A 272 SHEET 3 AA2 4 ARG A 307 ARG A 319 -1 O SER A 318 N GLU A 250 SHEET 4 AA2 4 GLN A 295 SER A 302 -1 N GLU A 296 O LYS A 313 SHEET 1 AA3 5 LEU A 275 PHE A 278 0 SHEET 2 AA3 5 LEU A 324 VAL A 329 1 O THR A 325 N LEU A 275 SHEET 3 AA3 5 ILE A 474 PRO A 482 -1 O TYR A 480 N LEU A 324 SHEET 4 AA3 5 TYR A 417 GLN A 427 -1 N ASP A 419 O GLY A 481 SHEET 5 AA3 5 MET A 352 ASP A 354 -1 N LEU A 353 O TYR A 418 SHEET 1 AA4 7 LEU A 275 PHE A 278 0 SHEET 2 AA4 7 LEU A 324 VAL A 329 1 O THR A 325 N LEU A 275 SHEET 3 AA4 7 ILE A 474 PRO A 482 -1 O TYR A 480 N LEU A 324 SHEET 4 AA4 7 TYR A 417 GLN A 427 -1 N ASP A 419 O GLY A 481 SHEET 5 AA4 7 HIS A 435 LYS A 443 -1 O HIS A 435 N GLN A 427 SHEET 6 AA4 7 GLU A 446 ASP A 451 -1 O PHE A 450 N SER A 438 SHEET 7 AA4 7 LYS A 454 VAL A 458 -1 O SER A 456 N LYS A 449 SHEET 1 AA5 2 GLY B 106 LEU B 107 0 SHEET 2 AA5 2 SER B 169 ILE B 170 1 O ILE B 170 N GLY B 106 SHEET 1 AA6 4 THR B 266 GLN B 272 0 SHEET 2 AA6 4 VAL B 249 CYS B 257 -1 N VAL B 249 O GLN B 272 SHEET 3 AA6 4 TYR B 311 ARG B 319 -1 O SER B 318 N GLU B 250 SHEET 4 AA6 4 GLN B 295 ILE B 298 -1 N GLU B 296 O LYS B 313 SHEET 1 AA7 5 LEU B 275 PHE B 278 0 SHEET 2 AA7 5 LEU B 324 VAL B 329 1 O THR B 325 N LEU B 275 SHEET 3 AA7 5 ILE B 474 PRO B 482 -1 O LEU B 478 N ILE B 326 SHEET 4 AA7 5 TYR B 417 GLN B 427 -1 N ASP B 419 O GLY B 481 SHEET 5 AA7 5 MET B 352 ASP B 354 -1 N LEU B 353 O TYR B 418 SHEET 1 AA8 7 LEU B 275 PHE B 278 0 SHEET 2 AA8 7 LEU B 324 VAL B 329 1 O THR B 325 N LEU B 275 SHEET 3 AA8 7 ILE B 474 PRO B 482 -1 O LEU B 478 N ILE B 326 SHEET 4 AA8 7 TYR B 417 GLN B 427 -1 N ASP B 419 O GLY B 481 SHEET 5 AA8 7 HIS B 435 LYS B 443 -1 O VAL B 437 N THR B 425 SHEET 6 AA8 7 GLU B 446 ASP B 451 -1 O GLU B 446 N ARG B 442 SHEET 7 AA8 7 LYS B 454 VAL B 458 -1 O VAL B 458 N TRP B 447 CISPEP 1 ALA B 137 GLY B 138 0 -5.68 CISPEP 2 PHE B 332 TYR B 333 0 0.44 SITE 1 AC1 10 GLN A 197 GLN A 198 ASP A 199 ARG A 330 SITE 2 AC1 10 PHE A 331 SER A 431 SER A 432 SER A 433 SITE 3 AC1 10 TYR A 436 TYR A 476 SITE 1 AC2 12 LEU B 196 GLN B 197 GLN B 198 ASP B 199 SITE 2 AC2 12 ARG B 330 LYS B 342 HIS B 426 SER B 431 SITE 3 AC2 12 SER B 432 SER B 433 TYR B 436 TYR B 476 CRYST1 81.809 104.351 118.271 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012224 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009583 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008455 0.00000