HEADER APOPTOSIS 11-OCT-18 6IJQ TITLE SOLUTION STRUCTURE OF BCL-XL BOUND TO P73-TAD PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: TUMOR PROTEIN P73; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: P53-LIKE TRANSCRIPTION FACTOR,P53-RELATED PROTEIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: BCL-2-LIKE PROTEIN 1,BCL-2-LIKE PROTEIN 1; COMPND 8 CHAIN: B; COMPND 9 SYNONYM: BCL2-L-1,APOPTOSIS REGULATOR BCL-X,BCL2-L-1,APOPTOSIS COMPND 10 REGULATOR BCL-X; COMPND 11 ENGINEERED: YES; COMPND 12 OTHER_DETAILS: THIS CONSTRUCT IS 40 RESIDUE-DELETED MUTANT (AA 45-84) COMPND 13 WITH THE ADDITIONAL FIRST 4 RESIDUES AND THE LAST 8 RESIDUES FROM COMPND 14 EXPRESSION VECTOR.,THIS CONSTRUCT IS 40 RESIDUE-DELETED MUTANT (AA COMPND 15 45-84) WITH THE ADDITIONAL FIRST 4 RESIDUES AND THE LAST 8 RESIDUES COMPND 16 FROM EXPRESSION VECTOR. SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 4 ORGANISM_COMMON: HUMAN; SOURCE 5 ORGANISM_TAXID: 9606; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 8 ORGANISM_COMMON: HUMAN; SOURCE 9 ORGANISM_TAXID: 9606; SOURCE 10 GENE: BCL2L1, BCL2L, BCLX; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS COMPLEX STRUCTURE, APOPTOSIS EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR M.-K.YOON,J.-H.HA,M.-S.LEE,S.-W.CHI REVDAT 4 14-JUN-23 6IJQ 1 REMARK REVDAT 3 02-JAN-19 6IJQ 1 JRNL REVDAT 2 05-DEC-18 6IJQ 1 JRNL REVDAT 1 21-NOV-18 6IJQ 0 JRNL AUTH M.-K.YOON,B.-Y.KIM,J.-Y.LEE,J.-H.HA,S.A.KIM,D.-H.LEE, JRNL AUTH 2 M.-S.LEE,M.-K.LEE,J.S.CHOI,J.H.CHO,J.-H.KIM,S.KIM,J.SONG, JRNL AUTH 3 S.G.PARK,B.C.PARK,K.-H.BAE,S.U.CHOI,S.-W.CHI JRNL TITL CYTOPLASMIC PRO-APOPTOTIC FUNCTION OF THE TUMOR SUPPRESSOR JRNL TITL 2 P73 IS MEDIATED THROUGH A MODIFIED MODE OF RECOGNITION OF JRNL TITL 3 THE ANTI-APOPTOTIC REGULATOR BCL-XL. JRNL REF J. BIOL. CHEM. V. 293 19546 2018 JRNL REFN ESSN 1083-351X JRNL PMID 30429221 JRNL DOI 10.1074/JBC.RA118.003061 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR NIH, CNS REMARK 3 AUTHORS : SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE (X-PLOR REMARK 3 NIH), BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6IJQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-OCT-18. REMARK 100 THE DEPOSITION ID IS D_1300009320. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 150 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1 MM [U-13C; U-15[U-13C; U REMARK 210 -15N]N] BCL-XL, 2 MM P73 PEPTIDE, REMARK 210 90% H2O/10% D2O; 0.1 MM BCL-XL, REMARK 210 1 MM P73 PEPTIDE, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCACB; 3D REMARK 210 CBCA(CO)NH; 3D HCCH-TOCSY; 3D REMARK 210 13C/15N-EDITED NOESY-HSQC; 15N/ REMARK 210 13C-EDITED, 15N/13C-FILTERED 3D REMARK 210 NOESY; 2D TRANSFERRED NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE II REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CARA REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 MET B -3 REMARK 465 SER B -2 REMARK 465 MET B -1 REMARK 465 ALA B 0 REMARK 465 HIS B 172 REMARK 465 HIS B 173 REMARK 465 HIS B 174 REMARK 465 HIS B 175 REMARK 465 HIS B 176 REMARK 465 HIS B 177 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 314 -81.86 67.06 REMARK 500 1 SER B 2 -79.39 52.91 REMARK 500 1 THR B 35 -87.55 -70.18 REMARK 500 1 ALA B 37 72.93 44.15 REMARK 500 1 GLU B 39 2.38 55.79 REMARK 500 1 THR B 41 -80.67 -108.93 REMARK 500 1 GLU B 42 -19.88 -172.85 REMARK 500 1 LEU B 72 35.97 -85.26 REMARK 500 1 PRO B 76 91.55 -62.08 REMARK 500 1 ASN B 96 79.98 75.19 REMARK 500 1 LYS B 165 -72.41 -64.54 REMARK 500 2 ASP B 29 18.44 59.69 REMARK 500 2 GLU B 31 15.65 55.52 REMARK 500 2 ALA B 37 77.31 60.47 REMARK 500 2 HIS B 73 57.17 29.87 REMARK 500 2 ILE B 74 80.35 -44.68 REMARK 500 2 PRO B 76 108.97 -53.05 REMARK 500 2 ASN B 96 -13.92 -173.15 REMARK 500 2 MET B 119 -60.00 -96.41 REMARK 500 2 GLN B 120 -38.71 69.25 REMARK 500 2 ASN B 145 11.14 -168.88 REMARK 500 2 ASN B 157 -72.52 71.85 REMARK 500 2 ASN B 158 37.68 -161.89 REMARK 500 2 GLN B 167 36.30 16.73 REMARK 500 3 ASP B 29 73.25 48.50 REMARK 500 3 ALA B 37 85.51 62.36 REMARK 500 3 HIS B 73 -37.14 77.19 REMARK 500 3 ILE B 74 108.10 69.46 REMARK 500 3 PRO B 76 101.46 -51.68 REMARK 500 3 TRP B 148 -42.27 -151.99 REMARK 500 3 TYR B 155 -62.73 -108.38 REMARK 500 4 THR A 314 -84.93 58.66 REMARK 500 4 SER B 28 -51.01 -126.58 REMARK 500 4 GLU B 39 -38.58 -171.83 REMARK 500 4 GLU B 42 -22.75 -29.62 REMARK 500 4 GLU B 58 0.67 -64.06 REMARK 500 4 LEU B 59 -73.00 -86.87 REMARK 500 4 PRO B 76 104.60 -47.41 REMARK 500 4 ASN B 96 81.63 -166.84 REMARK 500 4 TRP B 97 -52.78 -29.32 REMARK 500 4 ASN B 145 11.89 -172.76 REMARK 500 4 LYS B 165 -83.35 -62.85 REMARK 500 4 ARG B 169 28.41 -78.20 REMARK 500 5 SER B 2 -22.39 -142.18 REMARK 500 5 ASP B 29 -22.30 74.48 REMARK 500 5 VAL B 30 33.47 -88.11 REMARK 500 5 THR B 35 98.10 -63.71 REMARK 500 5 GLU B 42 76.48 55.22 REMARK 500 5 ILE B 74 73.20 57.76 REMARK 500 5 PRO B 76 95.48 -51.20 REMARK 500 REMARK 500 THIS ENTRY HAS 237 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 VAL B 95 ASN B 96 10 147.13 REMARK 500 VAL B 95 ASN B 96 18 147.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 36133 RELATED DB: BMRB DBREF 6IJQ A 310 325 UNP O15350 P73_HUMAN 10 25 DBREF 6IJQ B 1 44 UNP Q07817 B2CL1_HUMAN 1 44 DBREF 6IJQ B 45 169 UNP Q07817 B2CL1_HUMAN 85 209 SEQADV 6IJQ MET B -3 UNP Q07817 EXPRESSION TAG SEQADV 6IJQ SER B -2 UNP Q07817 EXPRESSION TAG SEQADV 6IJQ MET B -1 UNP Q07817 EXPRESSION TAG SEQADV 6IJQ ALA B 0 UNP Q07817 EXPRESSION TAG SEQADV 6IJQ LEU B 170 UNP Q07817 EXPRESSION TAG SEQADV 6IJQ GLU B 171 UNP Q07817 EXPRESSION TAG SEQADV 6IJQ HIS B 172 UNP Q07817 EXPRESSION TAG SEQADV 6IJQ HIS B 173 UNP Q07817 EXPRESSION TAG SEQADV 6IJQ HIS B 174 UNP Q07817 EXPRESSION TAG SEQADV 6IJQ HIS B 175 UNP Q07817 EXPRESSION TAG SEQADV 6IJQ HIS B 176 UNP Q07817 EXPRESSION TAG SEQADV 6IJQ HIS B 177 UNP Q07817 EXPRESSION TAG SEQRES 1 A 16 ASP GLY GLY THR THR PHE GLU HIS LEU TRP SER SER LEU SEQRES 2 A 16 GLU PRO ASP SEQRES 1 B 181 MET SER MET ALA MET SER GLN SER ASN ARG GLU LEU VAL SEQRES 2 B 181 VAL ASP PHE LEU SER TYR LYS LEU SER GLN LYS GLY TYR SEQRES 3 B 181 SER TRP SER GLN PHE SER ASP VAL GLU GLU ASN ARG THR SEQRES 4 B 181 GLU ALA PRO GLU GLY THR GLU SER GLU ALA VAL LYS GLN SEQRES 5 B 181 ALA LEU ARG GLU ALA GLY ASP GLU PHE GLU LEU ARG TYR SEQRES 6 B 181 ARG ARG ALA PHE SER ASP LEU THR SER GLN LEU HIS ILE SEQRES 7 B 181 THR PRO GLY THR ALA TYR GLN SER PHE GLU GLN VAL VAL SEQRES 8 B 181 ASN GLU LEU PHE ARG ASP GLY VAL ASN TRP GLY ARG ILE SEQRES 9 B 181 VAL ALA PHE PHE SER PHE GLY GLY ALA LEU CYS VAL GLU SEQRES 10 B 181 SER VAL ASP LYS GLU MET GLN VAL LEU VAL SER ARG ILE SEQRES 11 B 181 ALA ALA TRP MET ALA THR TYR LEU ASN ASP HIS LEU GLU SEQRES 12 B 181 PRO TRP ILE GLN GLU ASN GLY GLY TRP ASP THR PHE VAL SEQRES 13 B 181 GLU LEU TYR GLY ASN ASN ALA ALA ALA GLU SER ARG LYS SEQRES 14 B 181 GLY GLN GLU ARG LEU GLU HIS HIS HIS HIS HIS HIS HELIX 1 AA1 THR A 314 GLU A 323 1 10 HELIX 2 AA2 SER B 2 SER B 18 1 17 HELIX 3 AA3 GLN B 19 GLY B 21 5 3 HELIX 4 AA4 SER B 23 ASP B 29 1 7 HELIX 5 AA5 GLU B 31 THR B 35 5 5 HELIX 6 AA6 GLU B 42 HIS B 73 1 32 HELIX 7 AA7 TYR B 80 ASP B 93 1 14 HELIX 8 AA8 GLY B 98 LYS B 117 1 20 HELIX 9 AA9 GLN B 120 HIS B 137 1 18 HELIX 10 AB1 GLU B 139 GLU B 144 1 6 HELIX 11 AB2 TRP B 148 GLY B 156 1 9 HELIX 12 AB3 ASN B 158 ARG B 164 1 7 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1