HEADER DNA BINDING PROTEIN/DNA 29-OCT-18 6IOD TITLE THE STRUCTURE OF UDGX IN COMPLEX WITH SINGLE-STRANDED DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHAGE SPO1 DNA POLYMERASE-RELATED PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 7-215; COMPND 5 EC: 2.7.7.7; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DNA; COMPND 9 CHAIN: C, D; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM SMEGMATIS MC2 155; SOURCE 3 ORGANISM_TAXID: 246196; SOURCE 4 STRAIN: MC2 155; SOURCE 5 GENE: MSMEI_0259; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: MYCOBACTERIUM SMEGMATIS; SOURCE 11 ORGANISM_TAXID: 1772 KEYWDS URACIL DNA GLYCOSYLASE, DNA REPAIR, IRON-SULFUR, DNA BINDING PROTEIN- KEYWDS 2 DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR W.XIE,J.TU REVDAT 2 22-NOV-23 6IOD 1 REMARK REVDAT 1 31-JUL-19 6IOD 0 JRNL AUTH J.TU,R.CHEN,Y.YANG,W.CAO,W.XIE JRNL TITL SUICIDE INACTIVATION OF THE URACIL DNA GLYCOSYLASE UDGX BY JRNL TITL 2 COVALENT COMPLEX FORMATION. JRNL REF NAT.CHEM.BIOL. V. 15 615 2019 JRNL REFN ESSN 1552-4469 JRNL PMID 31101915 JRNL DOI 10.1038/S41589-019-0290-X REMARK 2 REMARK 2 RESOLUTION. 1.66 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.66 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.93 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 52033 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.920 REMARK 3 FREE R VALUE TEST SET COUNT : 2558 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.9444 - 4.3464 1.00 2805 150 0.1701 0.2045 REMARK 3 2 4.3464 - 3.4504 1.00 2788 158 0.1591 0.2173 REMARK 3 3 3.4504 - 3.0143 0.99 2744 159 0.1795 0.2236 REMARK 3 4 3.0143 - 2.7388 1.00 2751 146 0.1985 0.2323 REMARK 3 5 2.7388 - 2.5425 1.00 2785 123 0.2053 0.2398 REMARK 3 6 2.5425 - 2.3926 1.00 2748 148 0.1857 0.2184 REMARK 3 7 2.3926 - 2.2728 0.99 2722 146 0.1876 0.2128 REMARK 3 8 2.2728 - 2.1739 1.00 2732 147 0.1803 0.2013 REMARK 3 9 2.1739 - 2.0902 1.00 2723 166 0.1846 0.2240 REMARK 3 10 2.0902 - 2.0181 1.00 2759 147 0.1848 0.2170 REMARK 3 11 2.0181 - 1.9550 1.00 2766 132 0.1867 0.2164 REMARK 3 12 1.9550 - 1.8991 1.00 2723 135 0.1897 0.2223 REMARK 3 13 1.8991 - 1.8491 0.97 2725 134 0.1803 0.1926 REMARK 3 14 1.8491 - 1.8040 0.99 2734 125 0.1871 0.2129 REMARK 3 15 1.8040 - 1.7630 0.99 2762 122 0.1809 0.2152 REMARK 3 16 1.7630 - 1.7255 1.00 2741 148 0.1918 0.2121 REMARK 3 17 1.7255 - 1.6909 1.00 2696 129 0.1883 0.2266 REMARK 3 18 1.6909 - 1.6590 0.99 2771 143 0.2034 0.2120 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.310 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 3563 REMARK 3 ANGLE : 1.633 4922 REMARK 3 CHIRALITY : 0.063 564 REMARK 3 PLANARITY : 0.007 572 REMARK 3 DIHEDRAL : 18.414 2017 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -2 THROUGH 40 ) REMARK 3 ORIGIN FOR THE GROUP (A): 52.1414 -15.8244 266.7605 REMARK 3 T TENSOR REMARK 3 T11: 0.0581 T22: 0.0596 REMARK 3 T33: 0.0742 T12: -0.0075 REMARK 3 T13: -0.0185 T23: 0.0165 REMARK 3 L TENSOR REMARK 3 L11: 0.0346 L22: 0.0045 REMARK 3 L33: 0.0105 L12: 0.0065 REMARK 3 L13: 0.0177 L23: 0.0052 REMARK 3 S TENSOR REMARK 3 S11: 0.0403 S12: -0.0519 S13: -0.0307 REMARK 3 S21: -0.0018 S22: 0.0121 S23: -0.0532 REMARK 3 S31: 0.0217 S32: 0.0410 S33: 0.0887 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 41 THROUGH 79 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.2643 -13.5041 266.9285 REMARK 3 T TENSOR REMARK 3 T11: 0.0470 T22: 0.0400 REMARK 3 T33: 0.0637 T12: -0.0124 REMARK 3 T13: 0.0022 T23: 0.0040 REMARK 3 L TENSOR REMARK 3 L11: 0.0228 L22: 0.0062 REMARK 3 L33: 0.0374 L12: -0.0062 REMARK 3 L13: 0.0125 L23: -0.0076 REMARK 3 S TENSOR REMARK 3 S11: 0.0386 S12: -0.1572 S13: -0.0421 REMARK 3 S21: 0.0065 S22: -0.0201 S23: 0.0239 REMARK 3 S31: -0.0632 S32: -0.0339 S33: 0.0011 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 80 THROUGH 101 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.6321 -12.8383 265.7817 REMARK 3 T TENSOR REMARK 3 T11: -0.0188 T22: -0.1955 REMARK 3 T33: 0.0577 T12: -0.1479 REMARK 3 T13: 0.0397 T23: 0.0878 REMARK 3 L TENSOR REMARK 3 L11: 0.0093 L22: 0.0494 REMARK 3 L33: 0.0180 L12: -0.0190 REMARK 3 L13: 0.0067 L23: -0.0211 REMARK 3 S TENSOR REMARK 3 S11: 0.0227 S12: -0.0598 S13: -0.0201 REMARK 3 S21: -0.0218 S22: 0.0185 S23: 0.0443 REMARK 3 S31: -0.0705 S32: -0.0291 S33: 0.0088 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 102 THROUGH 113 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.5936 2.0645 261.4876 REMARK 3 T TENSOR REMARK 3 T11: 0.1013 T22: -0.0386 REMARK 3 T33: 0.0624 T12: -0.0273 REMARK 3 T13: 0.0250 T23: 0.0040 REMARK 3 L TENSOR REMARK 3 L11: 0.0000 L22: 0.0201 REMARK 3 L33: 0.0167 L12: -0.0016 REMARK 3 L13: -0.0050 L23: 0.0097 REMARK 3 S TENSOR REMARK 3 S11: 0.0053 S12: -0.0205 S13: 0.0172 REMARK 3 S21: 0.0017 S22: -0.0114 S23: 0.0061 REMARK 3 S31: -0.0124 S32: 0.0076 S33: -0.0135 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 114 THROUGH 157 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.1348 -19.3616 255.1966 REMARK 3 T TENSOR REMARK 3 T11: 0.0624 T22: 0.0369 REMARK 3 T33: 0.0782 T12: 0.0063 REMARK 3 T13: 0.0005 T23: 0.0118 REMARK 3 L TENSOR REMARK 3 L11: 0.0318 L22: 0.0539 REMARK 3 L33: 0.0281 L12: 0.0319 REMARK 3 L13: 0.0149 L23: 0.0299 REMARK 3 S TENSOR REMARK 3 S11: 0.0287 S12: 0.1241 S13: -0.1536 REMARK 3 S21: -0.0646 S22: 0.0389 S23: -0.0610 REMARK 3 S31: 0.0367 S32: 0.0972 S33: 0.0181 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 158 THROUGH 209 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.3592 -18.0907 254.7798 REMARK 3 T TENSOR REMARK 3 T11: 0.0870 T22: -0.1265 REMARK 3 T33: 0.1029 T12: -0.0045 REMARK 3 T13: -0.0079 T23: -0.0455 REMARK 3 L TENSOR REMARK 3 L11: 0.0200 L22: 0.0133 REMARK 3 L33: 0.0473 L12: 0.0045 REMARK 3 L13: 0.0111 L23: -0.0154 REMARK 3 S TENSOR REMARK 3 S11: -0.0279 S12: 0.0559 S13: -0.0183 REMARK 3 S21: -0.0304 S22: 0.0483 S23: -0.0429 REMARK 3 S31: 0.0104 S32: -0.0416 S33: 0.0157 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 4 THROUGH 13 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.2950 0.2355 293.5781 REMARK 3 T TENSOR REMARK 3 T11: 0.3521 T22: 0.4826 REMARK 3 T33: 0.4046 T12: -0.0753 REMARK 3 T13: -0.0611 T23: 0.0112 REMARK 3 L TENSOR REMARK 3 L11: 0.0007 L22: 0.0007 REMARK 3 L33: 0.0020 L12: 0.0003 REMARK 3 L13: 0.0003 L23: -0.0018 REMARK 3 S TENSOR REMARK 3 S11: 0.0050 S12: -0.0027 S13: 0.0028 REMARK 3 S21: 0.0030 S22: 0.0062 S23: -0.0063 REMARK 3 S31: 0.0006 S32: 0.0021 S33: 0.0000 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 14 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.0158 -8.4696 285.8565 REMARK 3 T TENSOR REMARK 3 T11: 0.0574 T22: 0.4088 REMARK 3 T33: 0.0652 T12: -0.0214 REMARK 3 T13: -0.0374 T23: 0.0636 REMARK 3 L TENSOR REMARK 3 L11: 0.0185 L22: 0.0369 REMARK 3 L33: 0.0436 L12: -0.0015 REMARK 3 L13: 0.0042 L23: -0.0127 REMARK 3 S TENSOR REMARK 3 S11: 0.0049 S12: -0.1437 S13: -0.0082 REMARK 3 S21: 0.0143 S22: -0.0710 S23: -0.0693 REMARK 3 S31: -0.0135 S32: 0.0903 S33: -0.0279 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 68 THROUGH 91 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.3325 -4.0765 276.4611 REMARK 3 T TENSOR REMARK 3 T11: 0.0959 T22: 0.1708 REMARK 3 T33: 0.0691 T12: -0.0118 REMARK 3 T13: 0.0040 T23: -0.0326 REMARK 3 L TENSOR REMARK 3 L11: 0.0051 L22: 0.0034 REMARK 3 L33: 0.0131 L12: 0.0037 REMARK 3 L13: -0.0079 L23: -0.0061 REMARK 3 S TENSOR REMARK 3 S11: 0.0165 S12: -0.0346 S13: 0.0098 REMARK 3 S21: -0.0268 S22: -0.0097 S23: -0.0063 REMARK 3 S31: -0.0390 S32: 0.0314 S33: 0.0078 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 92 THROUGH 113 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.4651 -17.3259 292.1206 REMARK 3 T TENSOR REMARK 3 T11: 0.1586 T22: 0.4186 REMARK 3 T33: 0.1391 T12: -0.0120 REMARK 3 T13: -0.0250 T23: 0.0997 REMARK 3 L TENSOR REMARK 3 L11: 0.0086 L22: 0.0106 REMARK 3 L33: 0.0087 L12: 0.0029 REMARK 3 L13: -0.0083 L23: 0.0022 REMARK 3 S TENSOR REMARK 3 S11: -0.0050 S12: -0.0239 S13: -0.0272 REMARK 3 S21: 0.0073 S22: 0.0018 S23: -0.0016 REMARK 3 S31: 0.0188 S32: 0.0140 S33: -0.0053 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 114 THROUGH 140 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.3149 -0.4334 292.4067 REMARK 3 T TENSOR REMARK 3 T11: 0.1960 T22: 0.4310 REMARK 3 T33: 0.0140 T12: -0.1595 REMARK 3 T13: 0.0013 T23: -0.1294 REMARK 3 L TENSOR REMARK 3 L11: 0.0089 L22: -0.0003 REMARK 3 L33: 0.0063 L12: 0.0020 REMARK 3 L13: 0.0052 L23: 0.0035 REMARK 3 S TENSOR REMARK 3 S11: -0.0138 S12: -0.0455 S13: 0.0172 REMARK 3 S21: 0.0320 S22: -0.0318 S23: -0.0117 REMARK 3 S31: -0.0226 S32: 0.0158 S33: -0.0280 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 141 THROUGH 157 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.8778 -3.5973 297.4000 REMARK 3 T TENSOR REMARK 3 T11: 0.2066 T22: 0.4469 REMARK 3 T33: 0.0982 T12: -0.0761 REMARK 3 T13: 0.0383 T23: -0.0923 REMARK 3 L TENSOR REMARK 3 L11: 0.0164 L22: 0.0023 REMARK 3 L33: 0.0099 L12: -0.0068 REMARK 3 L13: -0.0028 L23: 0.0016 REMARK 3 S TENSOR REMARK 3 S11: 0.0169 S12: 0.0023 S13: 0.0050 REMARK 3 S21: 0.0020 S22: 0.0085 S23: 0.0138 REMARK 3 S31: -0.0065 S32: -0.0085 S33: 0.0120 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 158 THROUGH 186 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.8720 -3.2910 288.8062 REMARK 3 T TENSOR REMARK 3 T11: 0.1447 T22: 0.2687 REMARK 3 T33: 0.1106 T12: -0.0200 REMARK 3 T13: 0.0317 T23: -0.0452 REMARK 3 L TENSOR REMARK 3 L11: 0.0442 L22: 0.0042 REMARK 3 L33: 0.0653 L12: -0.0034 REMARK 3 L13: -0.0018 L23: -0.0163 REMARK 3 S TENSOR REMARK 3 S11: 0.0632 S12: -0.0213 S13: 0.0269 REMARK 3 S21: -0.0010 S22: 0.0435 S23: -0.0023 REMARK 3 S31: -0.0029 S32: -0.0132 S33: 0.0399 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 187 THROUGH 208 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.7411 -3.8205 280.4449 REMARK 3 T TENSOR REMARK 3 T11: 0.1057 T22: 0.1964 REMARK 3 T33: 0.1097 T12: -0.0084 REMARK 3 T13: 0.0035 T23: -0.0421 REMARK 3 L TENSOR REMARK 3 L11: 0.0472 L22: 0.0533 REMARK 3 L33: 0.0661 L12: -0.0244 REMARK 3 L13: 0.0198 L23: -0.0357 REMARK 3 S TENSOR REMARK 3 S11: 0.0431 S12: -0.0485 S13: 0.0148 REMARK 3 S21: -0.0120 S22: 0.0548 S23: -0.0032 REMARK 3 S31: -0.0088 S32: -0.0204 S33: 0.0281 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 6 THROUGH 16 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.6145 -0.8202 248.8297 REMARK 3 T TENSOR REMARK 3 T11: 0.1044 T22: 0.0505 REMARK 3 T33: 0.0838 T12: -0.0010 REMARK 3 T13: 0.0087 T23: 0.0037 REMARK 3 L TENSOR REMARK 3 L11: 0.0080 L22: 0.0057 REMARK 3 L33: 0.0004 L12: 0.0059 REMARK 3 L13: 0.0005 L23: -0.0039 REMARK 3 S TENSOR REMARK 3 S11: -0.0102 S12: -0.0102 S13: 0.0576 REMARK 3 S21: -0.0324 S22: -0.0190 S23: -0.0466 REMARK 3 S31: -0.0343 S32: -0.0210 S33: -0.0697 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 6 THROUGH 16 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.1705 -18.9089 297.6932 REMARK 3 T TENSOR REMARK 3 T11: 0.2047 T22: 0.3089 REMARK 3 T33: 0.1690 T12: -0.0336 REMARK 3 T13: 0.0339 T23: 0.0236 REMARK 3 L TENSOR REMARK 3 L11: 0.0001 L22: 0.0031 REMARK 3 L33: 0.0010 L12: -0.0026 REMARK 3 L13: -0.0003 L23: -0.0008 REMARK 3 S TENSOR REMARK 3 S11: 0.0122 S12: -0.0270 S13: -0.0425 REMARK 3 S21: 0.0536 S22: -0.0049 S23: 0.0083 REMARK 3 S31: 0.0401 S32: 0.0029 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6IOD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-NOV-18. REMARK 100 THE DEPOSITION ID IS D_1300009451. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-SEP-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NFPSS REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52269 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.660 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 5.500 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.05200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 33.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.66 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.72 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.80 REMARK 200 R MERGE FOR SHELL (I) : 0.49600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6IO9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.15M SODIUM MALONATE PH 7.0 AND 3.8% REMARK 280 MPD, PH 5.6, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 21.90250 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.93100 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 21.90250 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 41.93100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2220 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11560 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10790 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 ALA B 101 REMARK 465 ALA B 102 REMARK 465 GLY B 103 REMARK 465 GLY B 104 REMARK 465 LYS B 105 REMARK 465 ARG B 106 REMARK 465 ASP B 166 REMARK 465 VAL B 167 REMARK 465 PRO B 168 REMARK 465 GLY B 169 REMARK 465 ASP B 170 REMARK 465 PRO B 209 REMARK 465 DT C 1 REMARK 465 DC C 2 REMARK 465 DA C 3 REMARK 465 DA C 4 REMARK 465 DG C 5 REMARK 465 DT D 1 REMARK 465 DC D 2 REMARK 465 DA D 3 REMARK 465 DA D 4 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 105 CG CD CE NZ REMARK 470 ASP A 166 CG OD1 OD2 REMARK 470 LYS A 187 CG CD CE NZ REMARK 470 GLU A 189 CG CD OE1 OE2 REMARK 470 ARG A 190 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 191 CG CD OE1 OE2 REMARK 470 HIS B 10 CG ND1 CD2 CE1 NE2 REMARK 470 ARG B 25 CG CD NE CZ NH1 NH2 REMARK 470 TYR B 30 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG B 31 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 46 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 97 CG CD CE NZ REMARK 470 ARG B 100 CG CD NE CZ NH1 NH2 REMARK 470 ILE B 108 CG1 CG2 CD1 REMARK 470 LYS B 110 CG CD CE NZ REMARK 470 ILE B 125 CG1 CG2 CD1 REMARK 470 GLU B 132 CG CD OE1 OE2 REMARK 470 VAL B 164 CG1 CG2 REMARK 470 LYS B 187 CG CD CE NZ REMARK 470 VAL B 207 CG1 CG2 REMARK 470 ARG B 208 CG CD NE CZ NH1 NH2 REMARK 470 ORP C 8 O1 REMARK 470 ORP D 8 O1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE2 HIS A 109 C1 ORP C 8 1.50 REMARK 500 NE2 HIS B 109 C1 ORP D 8 1.50 REMARK 500 O HOH A 405 O HOH A 426 2.00 REMARK 500 O HOH A 402 O HOH A 521 2.02 REMARK 500 O HOH A 463 O HOH A 566 2.04 REMARK 500 O HOH B 455 O HOH B 460 2.04 REMARK 500 OD1 ASP A 165 O HOH A 401 2.07 REMARK 500 O HOH A 402 O HOH A 415 2.09 REMARK 500 O HOH C 126 O HOH C 134 2.09 REMARK 500 O HOH B 409 O HOH B 432 2.10 REMARK 500 O HOH C 112 O HOH C 132 2.12 REMARK 500 NE ARG B 202 O HOH B 401 2.13 REMARK 500 O HOH A 435 O HOH C 132 2.14 REMARK 500 O HOH A 591 O HOH B 463 2.17 REMARK 500 O HOH A 602 O HOH C 123 2.17 REMARK 500 O HOH A 435 O HOH C 128 2.17 REMARK 500 O HOH A 433 O HOH A 575 2.19 REMARK 500 O HOH A 540 O HOH A 553 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH C 111 O HOH C 121 2859 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DG D 7 O3' ORP D 8 P -0.090 REMARK 500 DG D 11 O3' DG D 11 C3' -0.041 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU B 63 CA - CB - CG ANGL. DEV. = 15.9 DEGREES REMARK 500 DG C 11 O4' - C1' - N9 ANGL. DEV. = 2.5 DEGREES REMARK 500 DG D 7 C3' - O3' - P ANGL. DEV. = 7.8 DEGREES REMARK 500 DG D 11 C3' - C2' - C1' ANGL. DEV. = -5.6 DEGREES REMARK 500 DG D 11 O4' - C1' - N9 ANGL. DEV. = 2.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR B 11 143.42 -172.27 REMARK 500 ARG B 25 34.73 -144.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 608 DISTANCE = 6.78 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 301 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 24 SG REMARK 620 2 SF4 A 301 S1 105.5 REMARK 620 3 SF4 A 301 S2 115.2 105.1 REMARK 620 4 SF4 A 301 S4 120.7 107.3 101.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 301 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 27 SG REMARK 620 2 SF4 A 301 S2 121.2 REMARK 620 3 SF4 A 301 S3 103.3 104.2 REMARK 620 4 SF4 A 301 S4 119.1 102.7 104.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 301 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 95 ND1 REMARK 620 2 SF4 A 301 S1 108.4 REMARK 620 3 SF4 A 301 S3 121.9 103.7 REMARK 620 4 SF4 A 301 S4 110.5 106.3 104.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 301 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 120 SG REMARK 620 2 SF4 A 301 S1 113.2 REMARK 620 3 SF4 A 301 S2 113.0 105.5 REMARK 620 4 SF4 A 301 S3 115.6 103.9 104.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 B 301 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 24 SG REMARK 620 2 SF4 B 301 S1 110.3 REMARK 620 3 SF4 B 301 S2 142.0 101.0 REMARK 620 4 SF4 B 301 S4 113.5 86.3 88.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 B 301 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 27 SG REMARK 620 2 SF4 B 301 S2 100.4 REMARK 620 3 SF4 B 301 S3 117.3 90.4 REMARK 620 4 SF4 B 301 S4 141.8 90.1 99.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 B 301 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 95 ND1 REMARK 620 2 SF4 B 301 S1 104.3 REMARK 620 3 SF4 B 301 S3 129.2 91.4 REMARK 620 4 SF4 B 301 S4 129.7 86.2 98.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 B 301 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 120 SG REMARK 620 2 SF4 B 301 S1 117.9 REMARK 620 3 SF4 B 301 S2 119.6 103.3 REMARK 620 4 SF4 B 301 S3 126.8 92.7 90.3 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SF4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SF4 B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Poly-Saccharide residues DG C 7 REMARK 800 through HIS A 109 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-Saccharide ORP C 8 and DA C REMARK 800 9 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Poly-Saccharide residues DG D 7 REMARK 800 through HIS B 109 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-Saccharide ORP D 8 and DA D REMARK 800 9 DBREF 6IOD A 1 209 UNP I7F541 I7F541_MYCS2 7 215 DBREF 6IOD B 1 209 UNP I7F541 I7F541_MYCS2 7 215 DBREF 6IOD C 1 16 PDB 6IOD 6IOD 1 16 DBREF 6IOD D 1 16 PDB 6IOD 6IOD 1 16 SEQADV 6IOD GLY A -2 UNP I7F541 EXPRESSION TAG SEQADV 6IOD SER A -1 UNP I7F541 EXPRESSION TAG SEQADV 6IOD HIS A 0 UNP I7F541 EXPRESSION TAG SEQADV 6IOD GLY B -2 UNP I7F541 EXPRESSION TAG SEQADV 6IOD SER B -1 UNP I7F541 EXPRESSION TAG SEQADV 6IOD HIS B 0 UNP I7F541 EXPRESSION TAG SEQRES 1 A 212 GLY SER HIS MET ALA GLY ALA GLN ASP PHE VAL PRO HIS SEQRES 2 A 212 THR ALA ASP LEU ALA GLU LEU ALA ALA ALA ALA GLY GLU SEQRES 3 A 212 CYS ARG GLY CYS GLY LEU TYR ARG ASP ALA THR GLN ALA SEQRES 4 A 212 VAL PHE GLY ALA GLY GLY ARG SER ALA ARG ILE MET MET SEQRES 5 A 212 ILE GLY GLU GLN PRO GLY ASP LYS GLU ASP LEU ALA GLY SEQRES 6 A 212 LEU PRO PHE VAL GLY PRO ALA GLY ARG LEU LEU ASP ARG SEQRES 7 A 212 ALA LEU GLU ALA ALA ASP ILE ASP ARG ASP ALA LEU TYR SEQRES 8 A 212 VAL THR ASN ALA VAL LYS HIS PHE LYS PHE THR ARG ALA SEQRES 9 A 212 ALA GLY GLY LYS ARG ARG ILE HIS LYS THR PRO SER ARG SEQRES 10 A 212 THR GLU VAL VAL ALA CYS ARG PRO TRP LEU ILE ALA GLU SEQRES 11 A 212 MET THR SER VAL GLU PRO ASP VAL VAL VAL LEU LEU GLY SEQRES 12 A 212 ALA THR ALA ALA LYS ALA LEU LEU GLY ASN ASP PHE ARG SEQRES 13 A 212 VAL THR GLN HIS ARG GLY GLU VAL LEU HIS VAL ASP ASP SEQRES 14 A 212 VAL PRO GLY ASP PRO ALA LEU VAL ALA THR VAL HIS PRO SEQRES 15 A 212 SER SER LEU LEU ARG GLY PRO LYS GLU GLU ARG GLU SER SEQRES 16 A 212 ALA PHE ALA GLY LEU VAL ASP ASP LEU ARG VAL ALA ALA SEQRES 17 A 212 ASP VAL ARG PRO SEQRES 1 B 212 GLY SER HIS MET ALA GLY ALA GLN ASP PHE VAL PRO HIS SEQRES 2 B 212 THR ALA ASP LEU ALA GLU LEU ALA ALA ALA ALA GLY GLU SEQRES 3 B 212 CYS ARG GLY CYS GLY LEU TYR ARG ASP ALA THR GLN ALA SEQRES 4 B 212 VAL PHE GLY ALA GLY GLY ARG SER ALA ARG ILE MET MET SEQRES 5 B 212 ILE GLY GLU GLN PRO GLY ASP LYS GLU ASP LEU ALA GLY SEQRES 6 B 212 LEU PRO PHE VAL GLY PRO ALA GLY ARG LEU LEU ASP ARG SEQRES 7 B 212 ALA LEU GLU ALA ALA ASP ILE ASP ARG ASP ALA LEU TYR SEQRES 8 B 212 VAL THR ASN ALA VAL LYS HIS PHE LYS PHE THR ARG ALA SEQRES 9 B 212 ALA GLY GLY LYS ARG ARG ILE HIS LYS THR PRO SER ARG SEQRES 10 B 212 THR GLU VAL VAL ALA CYS ARG PRO TRP LEU ILE ALA GLU SEQRES 11 B 212 MET THR SER VAL GLU PRO ASP VAL VAL VAL LEU LEU GLY SEQRES 12 B 212 ALA THR ALA ALA LYS ALA LEU LEU GLY ASN ASP PHE ARG SEQRES 13 B 212 VAL THR GLN HIS ARG GLY GLU VAL LEU HIS VAL ASP ASP SEQRES 14 B 212 VAL PRO GLY ASP PRO ALA LEU VAL ALA THR VAL HIS PRO SEQRES 15 B 212 SER SER LEU LEU ARG GLY PRO LYS GLU GLU ARG GLU SER SEQRES 16 B 212 ALA PHE ALA GLY LEU VAL ASP ASP LEU ARG VAL ALA ALA SEQRES 17 B 212 ASP VAL ARG PRO SEQRES 1 C 16 DT DC DA DA DG DT DG ORP DA DG DG DC DA SEQRES 2 C 16 DT DG DC SEQRES 1 D 16 DT DC DA DA DG DT DG ORP DA DG DG DC DA SEQRES 2 D 16 DT DG DC HET ORP C 8 11 HET ORP D 8 11 HET SF4 A 301 8 HET SF4 B 301 8 HETNAM ORP 2-DEOXY-5-PHOSPHONO-RIBOSE HETNAM SF4 IRON/SULFUR CLUSTER FORMUL 3 ORP 2(C5 H11 O7 P) FORMUL 5 SF4 2(FE4 S4) FORMUL 7 HOH *322(H2 O) HELIX 1 AA1 ALA A 4 VAL A 8 5 5 HELIX 2 AA2 ASP A 13 GLY A 22 1 10 HELIX 3 AA3 CYS A 27 ARG A 31 5 5 HELIX 4 AA4 GLY A 55 GLY A 62 1 8 HELIX 5 AA5 GLY A 67 ALA A 80 1 14 HELIX 6 AA6 ASP A 83 ASP A 85 5 3 HELIX 7 AA7 SER A 113 GLU A 132 1 20 HELIX 8 AA8 GLY A 140 GLY A 149 1 10 HELIX 9 AA9 ARG A 153 ARG A 158 1 6 HELIX 10 AB1 HIS A 178 GLY A 185 1 8 HELIX 11 AB2 PRO A 186 GLU A 188 5 3 HELIX 12 AB3 GLU A 189 ASP A 206 1 18 HELIX 13 AB4 ALA B 4 VAL B 8 5 5 HELIX 14 AB5 ASP B 13 GLY B 22 1 10 HELIX 15 AB6 CYS B 27 ARG B 31 5 5 HELIX 16 AB7 GLY B 55 GLY B 62 1 8 HELIX 17 AB8 GLY B 67 ALA B 80 1 14 HELIX 18 AB9 ASP B 83 ASP B 85 5 3 HELIX 19 AC1 SER B 113 CYS B 120 1 8 HELIX 20 AC2 CYS B 120 GLU B 132 1 13 HELIX 21 AC3 GLY B 140 GLY B 149 1 10 HELIX 22 AC4 ARG B 153 ARG B 158 1 6 HELIX 23 AC5 HIS B 178 GLY B 185 1 8 HELIX 24 AC6 PRO B 186 VAL B 207 1 22 SHEET 1 AA1 6 ALA A 40 GLY A 41 0 SHEET 2 AA1 6 LEU A 87 ASN A 91 -1 O VAL A 89 N ALA A 40 SHEET 3 AA1 6 ILE A 47 GLY A 51 1 N GLY A 51 O THR A 90 SHEET 4 AA1 6 VAL A 135 LEU A 139 1 O VAL A 137 N MET A 48 SHEET 5 AA1 6 ALA A 172 THR A 176 1 O VAL A 174 N LEU A 138 SHEET 6 AA1 6 VAL A 161 LEU A 162 -1 N LEU A 162 O LEU A 173 SHEET 1 AA2 2 PHE A 98 THR A 99 0 SHEET 2 AA2 2 ILE A 108 HIS A 109 -1 O ILE A 108 N THR A 99 SHEET 1 AA3 5 LEU B 87 ASN B 91 0 SHEET 2 AA3 5 ILE B 47 GLY B 51 1 N MET B 49 O THR B 90 SHEET 3 AA3 5 VAL B 135 LEU B 139 1 O LEU B 139 N ILE B 50 SHEET 4 AA3 5 ALA B 172 THR B 176 1 O VAL B 174 N LEU B 138 SHEET 5 AA3 5 VAL B 161 LEU B 162 -1 N LEU B 162 O LEU B 173 SHEET 1 AA4 2 PHE B 98 THR B 99 0 SHEET 2 AA4 2 ILE B 108 HIS B 109 -1 O ILE B 108 N THR B 99 LINK O3' DG C 7 P ORP C 8 1555 1555 1.59 LINK O3 ORP C 8 P DA C 9 1555 1555 1.59 LINK O3' DG D 7 P ORP D 8 1555 1555 1.52 LINK O3 ORP D 8 P DA D 9 1555 1555 1.56 LINK SG CYS A 24 FE3 SF4 A 301 1555 1555 2.36 LINK SG CYS A 27 FE1 SF4 A 301 1555 1555 2.28 LINK ND1 HIS A 95 FE2 SF4 A 301 1555 1555 2.08 LINK SG CYS A 120 FE4 SF4 A 301 1555 1555 2.30 LINK SG CYS B 24 FE3 SF4 B 301 1555 1555 2.31 LINK SG CYS B 27 FE1 SF4 B 301 1555 1555 2.17 LINK ND1 HIS B 95 FE2 SF4 B 301 1555 1555 1.86 LINK SG CYS B 120 FE4 SF4 B 301 1555 1555 2.17 SITE 1 AC1 8 CYS A 24 GLY A 26 CYS A 27 LYS A 94 SITE 2 AC1 8 HIS A 95 CYS A 120 TRP A 123 HOH A 533 SITE 1 AC2 5 CYS B 24 GLY B 26 CYS B 27 HIS B 95 SITE 2 AC2 5 CYS B 120 SITE 1 AC3 40 ALA A 4 GLN A 5 ASP A 6 HIS A 10 SITE 2 AC3 40 THR A 11 ALA A 20 ARG A 25 GLU A 52 SITE 3 AC3 40 GLN A 53 PRO A 54 GLY A 55 PRO A 68 SITE 4 AC3 40 ALA A 69 ILE A 108 LYS A 110 TRP A 123 SITE 5 AC3 40 HIS A 178 SER A 180 SER A 181 LEU A 183 SITE 6 AC3 40 ARG A 184 HOH A 411 HOH A 428 HOH A 430 SITE 7 AC3 40 HOH A 444 HOH A 460 HOH A 461 HOH A 529 SITE 8 AC3 40 HOH A 531 DT C 6 DG C 10 DA C 13 SITE 9 AC3 40 DT C 14 HOH C 103 HOH C 107 HOH C 108 SITE 10 AC3 40 HOH C 110 HOH C 118 HOH C 123 HOH C 135 SITE 1 AC4 35 ALA A 4 GLN A 5 ASP A 6 PHE A 7 SITE 2 AC4 35 HIS A 10 THR A 11 ALA A 20 GLU A 52 SITE 3 AC4 35 GLN A 53 PRO A 54 GLY A 55 PRO A 68 SITE 4 AC4 35 ALA A 69 ILE A 108 LYS A 110 HIS A 178 SITE 5 AC4 35 SER A 180 SER A 181 ARG A 184 HOH A 411 SITE 6 AC4 35 HOH A 428 HOH A 430 HOH A 444 HOH A 460 SITE 7 AC4 35 HOH A 531 DG C 7 DG C 10 DA C 13 SITE 8 AC4 35 DT C 14 HOH C 107 HOH C 108 HOH C 110 SITE 9 AC4 35 HOH C 118 HOH C 123 HOH C 135 SITE 1 AC5 33 ALA B 4 GLN B 5 ASP B 6 HIS B 10 SITE 2 AC5 33 THR B 11 ALA B 20 ARG B 25 GLY B 26 SITE 3 AC5 33 GLU B 52 GLN B 53 PRO B 54 GLY B 55 SITE 4 AC5 33 GLY B 67 PRO B 68 ALA B 69 PHE B 96 SITE 5 AC5 33 ILE B 108 LYS B 110 TRP B 123 HIS B 178 SITE 6 AC5 33 SER B 180 LEU B 183 ARG B 184 HOH B 407 SITE 7 AC5 33 HOH B 415 HOH B 428 HOH B 434 HOH B 438 SITE 8 AC5 33 HOH B 458 DT D 6 DG D 10 HOH D 103 SITE 9 AC5 33 HOH D 106 SITE 1 AC6 16 GLN B 53 PRO B 54 GLY B 55 GLY B 67 SITE 2 AC6 16 PRO B 68 ALA B 69 HIS B 109 HIS B 178 SITE 3 AC6 16 SER B 180 ARG B 184 HOH B 407 HOH B 434 SITE 4 AC6 16 DG D 7 DG D 10 HOH D 103 HOH D 106 CRYST1 43.805 83.862 122.664 90.00 94.51 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022828 0.000000 0.001801 0.00000 SCALE2 0.000000 0.011924 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008178 0.00000