HEADER HYDROLASE 08-NOV-18 6IQU TITLE CRYSTAL STRUCTURE OF PRC WITH PDZ DOMAIN DELETION IN COMPLEX WITH NLPI COMPND MOL_ID: 1; COMPND 2 MOLECULE: LIPOPROTEIN NLPI; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: TAIL-SPECIFIC PROTEASE; COMPND 7 CHAIN: B; COMPND 8 SYNONYM: C-TERMINAL-PROCESSING PEPTIDASE,PRC PROTEIN,PROTEASE RE; COMPND 9 EC: 3.4.21.102; COMPND 10 ENGINEERED: YES; COMPND 11 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: NLPI, YHBM, B3163, JW3132; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI (STRAIN K12); SOURCE 11 ORGANISM_TAXID: 83333; SOURCE 12 STRAIN: K12; SOURCE 13 GENE: PRC, TSP, B1830, JW1819; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 15 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS PROTEIN QUALITY CONTROL, PEPTIDOGLYCAN REMODELING, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR C.K.CHUEH,C.I.CHANG REVDAT 3 22-NOV-23 6IQU 1 REMARK REVDAT 2 25-SEP-19 6IQU 1 JRNL REVDAT 1 24-JUL-19 6IQU 0 JRNL AUTH C.K.CHUEH,N.SOM,L.C.KE,M.R.HO,M.REDDY,C.I.CHANG JRNL TITL STRUCTURAL BASIS FOR THE DIFFERENTIAL REGULATORY ROLES OF JRNL TITL 2 THE PDZ DOMAIN IN C-TERMINAL PROCESSING PROTEASES. JRNL REF MBIO V. 10 2019 JRNL REFN ESSN 2150-7511 JRNL PMID 31387902 JRNL DOI 10.1128/MBIO.01129-19 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0232 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.80 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 88.9 REMARK 3 NUMBER OF REFLECTIONS : 22490 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1192 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.98 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1072 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 57.67 REMARK 3 BIN R VALUE (WORKING SET) : 0.2320 REMARK 3 BIN FREE R VALUE SET COUNT : 44 REMARK 3 BIN FREE R VALUE : 0.2810 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6434 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 11 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.79 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.384 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.257 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.737 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.931 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.896 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6556 ; 0.010 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 6049 ; 0.002 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8868 ; 1.765 ; 1.648 REMARK 3 BOND ANGLES OTHERS (DEGREES): 14035 ; 1.278 ; 1.582 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 795 ; 7.186 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 393 ;32.855 ;22.748 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1161 ;19.522 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 49 ;20.457 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 827 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7383 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1396 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3189 ; 4.734 ; 5.188 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3188 ; 4.732 ; 5.188 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3981 ; 7.082 ; 7.777 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3982 ; 7.081 ; 7.777 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3366 ; 4.780 ; 5.481 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 3364 ; 4.769 ; 5.479 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 4887 ; 7.118 ; 8.064 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 26932 ;10.693 ;96.520 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 26933 ;10.692 ;96.520 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6IQU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-NOV-18. REMARK 100 THE DEPOSITION ID IS D_1300009223. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-SEP-18 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : TPS 05A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99984 REMARK 200 MONOCHROMATOR : LN2-COOLED, FIXED-EXIT DOUBLE REMARK 200 CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : LN2-COOLED FIXED-EXIT DOUBLE REMARK 200 CRYSTAL SI(111) MONOCHROMATOR , REMARK 200 A PAIR OF K-B FOCUSING MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 V712 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25531 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.9500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 76.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.20100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.390 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.70 REMARK 200 STARTING MODEL: 5WQL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG3350, SODIUM CITRATE TRIBASIC REMARK 280 DIHYDRATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 74.19000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 74.19000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 52.91350 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 75.54100 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 52.91350 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 75.54100 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 74.19000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 52.91350 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 75.54100 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 74.19000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 52.91350 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 75.54100 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 17 REMARK 465 HIS A 18 REMARK 465 MET A 19 REMARK 465 SER A 20 REMARK 465 ASN A 21 REMARK 465 THR A 22 REMARK 465 SER A 23 REMARK 465 TRP A 24 REMARK 465 ARG A 25 REMARK 465 LYS A 26 REMARK 465 SER A 27 REMARK 465 ASP A 287 REMARK 465 LEU A 288 REMARK 465 ALA A 289 REMARK 465 GLU A 290 REMARK 465 SER A 291 REMARK 465 ASP A 292 REMARK 465 GLN A 293 REMARK 465 GLN A 294 REMARK 465 MET B 1 REMARK 465 ASN B 2 REMARK 465 MET B 3 REMARK 465 PHE B 4 REMARK 465 PHE B 5 REMARK 465 ARG B 6 REMARK 465 LEU B 7 REMARK 465 THR B 8 REMARK 465 ALA B 9 REMARK 465 LEU B 10 REMARK 465 ALA B 11 REMARK 465 GLY B 12 REMARK 465 LEU B 13 REMARK 465 LEU B 14 REMARK 465 ALA B 15 REMARK 465 ILE B 16 REMARK 465 ALA B 17 REMARK 465 GLY B 18 REMARK 465 GLN B 19 REMARK 465 THR B 20 REMARK 465 PHE B 21 REMARK 465 ALA B 22 REMARK 465 VAL B 23 REMARK 465 GLU B 24 REMARK 465 ASP B 25 REMARK 465 ILE B 26 REMARK 465 GLU B 235 REMARK 465 GLN B 236 REMARK 465 PHE B 237 REMARK 465 ASN B 238 REMARK 465 THR B 239 REMARK 465 GLU B 240 REMARK 465 MET B 241 REMARK 465 SER B 242 REMARK 465 LEU B 243 REMARK 465 SER B 244 REMARK 465 LEU B 245 REMARK 465 GLU B 246 REMARK 465 PHE B 247 REMARK 465 LYS B 579 REMARK 465 ALA B 580 REMARK 465 ARG B 581 REMARK 465 PRO B 582 REMARK 465 ALA B 583 REMARK 465 GLU B 584 REMARK 465 GLN B 585 REMARK 465 PRO B 586 REMARK 465 ALA B 587 REMARK 465 PRO B 588 REMARK 465 VAL B 589 REMARK 465 LYS B 590 REMARK 465 HIS B 591 REMARK 465 HIS B 592 REMARK 465 HIS B 593 REMARK 465 HIS B 594 REMARK 465 HIS B 595 REMARK 465 HIS B 596 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 48 -17.57 -46.19 REMARK 500 THR A 57 160.85 -48.95 REMARK 500 ASP A 94 -8.37 -58.32 REMARK 500 ASN A 111 76.92 -103.92 REMARK 500 ASP A 126 99.46 -163.30 REMARK 500 ARG A 145 75.09 -101.36 REMARK 500 ASP A 160 82.61 -168.84 REMARK 500 THR A 224 -65.66 -120.66 REMARK 500 ASN A 264 49.70 35.64 REMARK 500 GLN A 283 -8.33 -144.00 REMARK 500 ALA B 29 -157.66 -145.48 REMARK 500 ASP B 79 74.92 -117.19 REMARK 500 LEU B 109 50.21 -99.43 REMARK 500 ALA B 119 -13.79 88.93 REMARK 500 LEU B 179 5.71 -69.09 REMARK 500 ARG B 251 39.63 -98.98 REMARK 500 GLN B 291 26.28 -75.33 REMARK 500 PRO B 320 -73.12 -61.36 REMARK 500 SER B 360 -126.78 57.43 REMARK 500 PRO B 381 140.62 -38.85 REMARK 500 ARG B 403 68.24 -118.41 REMARK 500 LYS B 430 -42.07 -145.67 REMARK 500 LYS B 450 -33.33 -39.42 REMARK 500 ASN B 504 -72.92 -66.30 REMARK 500 MET B 506 52.73 -111.37 REMARK 500 LYS B 509 12.24 -58.93 REMARK 500 ASN B 511 51.24 -114.15 REMARK 500 ASP B 561 69.82 -110.23 REMARK 500 REMARK 500 REMARK: NULL DBREF 6IQU A 20 294 UNP P0AFB1 NLPI_ECOLI 20 294 DBREF 6IQU B 1 590 UNP P23865 PRC_ECOLI 1 682 SEQADV 6IQU GLY A 17 UNP P0AFB1 EXPRESSION TAG SEQADV 6IQU HIS A 18 UNP P0AFB1 EXPRESSION TAG SEQADV 6IQU MET A 19 UNP P0AFB1 EXPRESSION TAG SEQADV 6IQU B UNP P23865 GLY 247 DELETION SEQADV 6IQU B UNP P23865 ILE 248 DELETION SEQADV 6IQU B UNP P23865 GLY 249 DELETION SEQADV 6IQU B UNP P23865 ALA 250 DELETION SEQADV 6IQU B UNP P23865 VAL 251 DELETION SEQADV 6IQU B UNP P23865 LEU 252 DELETION SEQADV 6IQU B UNP P23865 GLN 253 DELETION SEQADV 6IQU B UNP P23865 MET 254 DELETION SEQADV 6IQU B UNP P23865 ASP 255 DELETION SEQADV 6IQU B UNP P23865 ASP 256 DELETION SEQADV 6IQU B UNP P23865 ASP 257 DELETION SEQADV 6IQU B UNP P23865 TYR 258 DELETION SEQADV 6IQU B UNP P23865 THR 259 DELETION SEQADV 6IQU B UNP P23865 VAL 260 DELETION SEQADV 6IQU B UNP P23865 ILE 261 DELETION SEQADV 6IQU B UNP P23865 ASN 262 DELETION SEQADV 6IQU B UNP P23865 SER 263 DELETION SEQADV 6IQU B UNP P23865 MET 264 DELETION SEQADV 6IQU B UNP P23865 VAL 265 DELETION SEQADV 6IQU B UNP P23865 ALA 266 DELETION SEQADV 6IQU B UNP P23865 GLY 267 DELETION SEQADV 6IQU B UNP P23865 GLY 268 DELETION SEQADV 6IQU B UNP P23865 PRO 269 DELETION SEQADV 6IQU B UNP P23865 ALA 270 DELETION SEQADV 6IQU B UNP P23865 ALA 271 DELETION SEQADV 6IQU B UNP P23865 LYS 272 DELETION SEQADV 6IQU B UNP P23865 SER 273 DELETION SEQADV 6IQU B UNP P23865 LYS 274 DELETION SEQADV 6IQU B UNP P23865 ALA 275 DELETION SEQADV 6IQU B UNP P23865 ILE 276 DELETION SEQADV 6IQU B UNP P23865 SER 277 DELETION SEQADV 6IQU B UNP P23865 VAL 278 DELETION SEQADV 6IQU B UNP P23865 GLY 279 DELETION SEQADV 6IQU B UNP P23865 ASP 280 DELETION SEQADV 6IQU B UNP P23865 LYS 281 DELETION SEQADV 6IQU B UNP P23865 ILE 282 DELETION SEQADV 6IQU B UNP P23865 VAL 283 DELETION SEQADV 6IQU B UNP P23865 GLY 284 DELETION SEQADV 6IQU B UNP P23865 VAL 285 DELETION SEQADV 6IQU B UNP P23865 GLY 286 DELETION SEQADV 6IQU B UNP P23865 GLN 287 DELETION SEQADV 6IQU B UNP P23865 THR 288 DELETION SEQADV 6IQU B UNP P23865 GLY 289 DELETION SEQADV 6IQU B UNP P23865 LYS 290 DELETION SEQADV 6IQU B UNP P23865 PRO 291 DELETION SEQADV 6IQU B UNP P23865 MET 292 DELETION SEQADV 6IQU B UNP P23865 VAL 293 DELETION SEQADV 6IQU B UNP P23865 ASP 294 DELETION SEQADV 6IQU B UNP P23865 VAL 295 DELETION SEQADV 6IQU B UNP P23865 ILE 296 DELETION SEQADV 6IQU B UNP P23865 GLY 297 DELETION SEQADV 6IQU B UNP P23865 TRP 298 DELETION SEQADV 6IQU B UNP P23865 ARG 299 DELETION SEQADV 6IQU B UNP P23865 LEU 300 DELETION SEQADV 6IQU B UNP P23865 ASP 301 DELETION SEQADV 6IQU B UNP P23865 ASP 302 DELETION SEQADV 6IQU B UNP P23865 VAL 303 DELETION SEQADV 6IQU B UNP P23865 VAL 304 DELETION SEQADV 6IQU B UNP P23865 ALA 305 DELETION SEQADV 6IQU B UNP P23865 LEU 306 DELETION SEQADV 6IQU B UNP P23865 ILE 307 DELETION SEQADV 6IQU B UNP P23865 LYS 308 DELETION SEQADV 6IQU B UNP P23865 GLY 309 DELETION SEQADV 6IQU B UNP P23865 PRO 310 DELETION SEQADV 6IQU B UNP P23865 LYS 311 DELETION SEQADV 6IQU B UNP P23865 GLY 312 DELETION SEQADV 6IQU B UNP P23865 SER 313 DELETION SEQADV 6IQU B UNP P23865 LYS 314 DELETION SEQADV 6IQU B UNP P23865 VAL 315 DELETION SEQADV 6IQU B UNP P23865 ARG 316 DELETION SEQADV 6IQU B UNP P23865 LEU 317 DELETION SEQADV 6IQU B UNP P23865 GLU 318 DELETION SEQADV 6IQU B UNP P23865 ILE 319 DELETION SEQADV 6IQU B UNP P23865 LEU 320 DELETION SEQADV 6IQU B UNP P23865 PRO 321 DELETION SEQADV 6IQU B UNP P23865 ALA 322 DELETION SEQADV 6IQU B UNP P23865 GLY 323 DELETION SEQADV 6IQU B UNP P23865 LYS 324 DELETION SEQADV 6IQU B UNP P23865 GLY 325 DELETION SEQADV 6IQU B UNP P23865 THR 326 DELETION SEQADV 6IQU B UNP P23865 LYS 327 DELETION SEQADV 6IQU B UNP P23865 THR 328 DELETION SEQADV 6IQU B UNP P23865 ARG 329 DELETION SEQADV 6IQU B UNP P23865 THR 330 DELETION SEQADV 6IQU B UNP P23865 VAL 331 DELETION SEQADV 6IQU B UNP P23865 THR 332 DELETION SEQADV 6IQU B UNP P23865 LEU 333 DELETION SEQADV 6IQU B UNP P23865 THR 334 DELETION SEQADV 6IQU B UNP P23865 ARG 335 DELETION SEQADV 6IQU B UNP P23865 GLU 336 DELETION SEQADV 6IQU B UNP P23865 ARG 337 DELETION SEQADV 6IQU B UNP P23865 ILE 338 DELETION SEQADV 6IQU PHE B 247 UNP P23865 ARG 339 LINKER SEQADV 6IQU HIS B 591 UNP P23865 EXPRESSION TAG SEQADV 6IQU HIS B 592 UNP P23865 EXPRESSION TAG SEQADV 6IQU HIS B 593 UNP P23865 EXPRESSION TAG SEQADV 6IQU HIS B 594 UNP P23865 EXPRESSION TAG SEQADV 6IQU HIS B 595 UNP P23865 EXPRESSION TAG SEQADV 6IQU HIS B 596 UNP P23865 EXPRESSION TAG SEQRES 1 A 278 GLY HIS MET SER ASN THR SER TRP ARG LYS SER GLU VAL SEQRES 2 A 278 LEU ALA VAL PRO LEU GLN PRO THR LEU GLN GLN GLU VAL SEQRES 3 A 278 ILE LEU ALA ARG MET GLU GLN ILE LEU ALA SER ARG ALA SEQRES 4 A 278 LEU THR ASP ASP GLU ARG ALA GLN LEU LEU TYR GLU ARG SEQRES 5 A 278 GLY VAL LEU TYR ASP SER LEU GLY LEU ARG ALA LEU ALA SEQRES 6 A 278 ARG ASN ASP PHE SER GLN ALA LEU ALA ILE ARG PRO ASP SEQRES 7 A 278 MET PRO GLU VAL PHE ASN TYR LEU GLY ILE TYR LEU THR SEQRES 8 A 278 GLN ALA GLY ASN PHE ASP ALA ALA TYR GLU ALA PHE ASP SEQRES 9 A 278 SER VAL LEU GLU LEU ASP PRO THR TYR ASN TYR ALA HIS SEQRES 10 A 278 LEU ASN ARG GLY ILE ALA LEU TYR TYR GLY GLY ARG ASP SEQRES 11 A 278 LYS LEU ALA GLN ASP ASP LEU LEU ALA PHE TYR GLN ASP SEQRES 12 A 278 ASP PRO ASN ASP PRO PHE ARG SER LEU TRP LEU TYR LEU SEQRES 13 A 278 ALA GLU GLN LYS LEU ASP GLU LYS GLN ALA LYS GLU VAL SEQRES 14 A 278 LEU LYS GLN HIS PHE GLU LYS SER ASP LYS GLU GLN TRP SEQRES 15 A 278 GLY TRP ASN ILE VAL GLU PHE TYR LEU GLY ASN ILE SER SEQRES 16 A 278 GLU GLN THR LEU MET GLU ARG LEU LYS ALA ASP ALA THR SEQRES 17 A 278 ASP ASN THR SER LEU ALA GLU HIS LEU SER GLU THR ASN SEQRES 18 A 278 PHE TYR LEU GLY LYS TYR TYR LEU SER LEU GLY ASP LEU SEQRES 19 A 278 ASP SER ALA THR ALA LEU PHE LYS LEU ALA VAL ALA ASN SEQRES 20 A 278 ASN VAL HIS ASN PHE VAL GLU HIS ARG TYR ALA LEU LEU SEQRES 21 A 278 GLU LEU SER LEU LEU GLY GLN ASP GLN ASP ASP LEU ALA SEQRES 22 A 278 GLU SER ASP GLN GLN SEQRES 1 B 596 MET ASN MET PHE PHE ARG LEU THR ALA LEU ALA GLY LEU SEQRES 2 B 596 LEU ALA ILE ALA GLY GLN THR PHE ALA VAL GLU ASP ILE SEQRES 3 B 596 THR ARG ALA ASP GLN ILE PRO VAL LEU LYS GLU GLU THR SEQRES 4 B 596 GLN HIS ALA THR VAL SER GLU ARG VAL THR SER ARG PHE SEQRES 5 B 596 THR ARG SER HIS TYR ARG GLN PHE ASP LEU ASP GLN ALA SEQRES 6 B 596 PHE SER ALA LYS ILE PHE ASP ARG TYR LEU ASN LEU LEU SEQRES 7 B 596 ASP TYR SER HIS ASN VAL LEU LEU ALA SER ASP VAL GLU SEQRES 8 B 596 GLN PHE ALA LYS LYS LYS THR GLU LEU GLY ASP GLU LEU SEQRES 9 B 596 ARG SER GLY LYS LEU ASP VAL PHE TYR ASP LEU TYR ASN SEQRES 10 B 596 LEU ALA GLN LYS ARG ARG PHE GLU ARG TYR GLN TYR ALA SEQRES 11 B 596 LEU SER VAL LEU GLU LYS PRO MET ASP PHE THR GLY ASN SEQRES 12 B 596 ASP THR TYR ASN LEU ASP ARG SER LYS ALA PRO TRP PRO SEQRES 13 B 596 LYS ASN GLU ALA GLU LEU ASN ALA LEU TRP ASP SER LYS SEQRES 14 B 596 VAL LYS PHE ASP GLU LEU SER LEU LYS LEU THR GLY LYS SEQRES 15 B 596 THR ASP LYS GLU ILE ARG GLU THR LEU THR ARG ARG TYR SEQRES 16 B 596 LYS PHE ALA ILE ARG ARG LEU ALA GLN THR ASN SER GLU SEQRES 17 B 596 ASP VAL PHE SER LEU ALA MET THR ALA PHE ALA ARG GLU SEQRES 18 B 596 ILE ASP PRO HIS THR ASN TYR LEU SER PRO ARG ASN THR SEQRES 19 B 596 GLU GLN PHE ASN THR GLU MET SER LEU SER LEU GLU PHE SEQRES 20 B 596 LEU GLU ASP ARG ALA VAL LYS MET SER VAL LYS THR VAL SEQRES 21 B 596 GLY LYS GLU LYS VAL GLY VAL LEU ASP ILE PRO GLY PHE SEQRES 22 B 596 TYR VAL GLY LEU THR ASP ASP VAL LYS VAL GLN LEU GLN SEQRES 23 B 596 LYS LEU GLU LYS GLN ASN VAL SER SER VAL ILE ILE ASP SEQRES 24 B 596 LEU ARG SER ASN GLY GLY GLY ALA LEU THR GLU ALA VAL SEQRES 25 B 596 SER LEU SER GLY LEU PHE ILE PRO ALA GLY PRO ILE VAL SEQRES 26 B 596 GLN VAL ARG ASP ASN ASN GLY LYS VAL ARG GLU ASP SER SEQRES 27 B 596 ASP THR ASP GLY GLN VAL PHE TYR LYS GLY PRO LEU VAL SEQRES 28 B 596 VAL LEU VAL ASP ARG PHE SER ALA SER ALA SER GLU ILE SEQRES 29 B 596 PHE ALA ALA ALA MET GLN ASP TYR GLY ARG ALA LEU VAL SEQRES 30 B 596 VAL GLY GLU PRO THR PHE GLY LYS GLY THR VAL GLN GLN SEQRES 31 B 596 TYR ARG SER LEU ASN ARG ILE TYR ASP GLN MET LEU ARG SEQRES 32 B 596 PRO GLU TRP PRO ALA LEU GLY SER VAL GLN TYR THR ILE SEQRES 33 B 596 GLN LYS PHE TYR ARG VAL ASN GLY GLY SER THR GLN ARG SEQRES 34 B 596 LYS GLY VAL THR PRO ASP ILE ILE MET PRO THR GLY ASN SEQRES 35 B 596 GLU GLU THR GLU THR GLY GLU LYS PHE GLU ASP ASN ALA SEQRES 36 B 596 LEU PRO TRP ASP SER ILE ASP ALA ALA THR TYR VAL LYS SEQRES 37 B 596 SER GLY ASP LEU THR ALA PHE GLU PRO GLU LEU LEU LYS SEQRES 38 B 596 GLU HIS ASN ALA ARG ILE ALA LYS ASP PRO GLU PHE GLN SEQRES 39 B 596 ASN ILE MET LYS ASP ILE ALA ARG PHE ASN ALA MET LYS SEQRES 40 B 596 ASP LYS ARG ASN ILE VAL SER LEU ASN TYR ALA VAL ARG SEQRES 41 B 596 GLU LYS GLU ASN ASN GLU ASP ASP ALA THR ARG LEU ALA SEQRES 42 B 596 ARG LEU ASN GLU ARG PHE LYS ARG GLU GLY LYS PRO GLU SEQRES 43 B 596 LEU LYS LYS LEU ASP ASP LEU PRO LYS ASP TYR GLN GLU SEQRES 44 B 596 PRO ASP PRO TYR LEU ASP GLU THR VAL ASN ILE ALA LEU SEQRES 45 B 596 ASP LEU ALA LYS LEU GLU LYS ALA ARG PRO ALA GLU GLN SEQRES 46 B 596 PRO ALA PRO VAL LYS HIS HIS HIS HIS HIS HIS FORMUL 3 HOH *11(H2 O) HELIX 1 AA1 THR A 37 LEU A 51 1 15 HELIX 2 AA2 THR A 57 LEU A 75 1 19 HELIX 3 AA3 LEU A 77 ALA A 90 1 14 HELIX 4 AA4 MET A 95 ALA A 109 1 15 HELIX 5 AA5 ASN A 111 ASP A 126 1 16 HELIX 6 AA6 ASN A 130 GLY A 143 1 14 HELIX 7 AA7 ARG A 145 GLN A 158 1 14 HELIX 8 AA8 ASP A 163 GLN A 175 1 13 HELIX 9 AA9 ASP A 178 LYS A 192 1 15 HELIX 10 AB1 GLY A 199 LEU A 207 1 9 HELIX 11 AB2 SER A 211 ALA A 223 1 13 HELIX 12 AB3 ASP A 225 LEU A 247 1 23 HELIX 13 AB4 ASP A 249 ALA A 262 1 14 HELIX 14 AB5 PHE A 268 GLY A 282 1 15 HELIX 15 AB6 GLN B 40 HIS B 56 1 17 HELIX 16 AB7 ASP B 63 ASP B 79 1 17 HELIX 17 AB8 LEU B 86 LYS B 95 1 10 HELIX 18 AB9 LYS B 96 THR B 98 5 3 HELIX 19 AC1 GLU B 99 GLY B 107 1 9 HELIX 20 AC2 LEU B 109 LEU B 118 1 10 HELIX 21 AC3 GLN B 120 GLU B 135 1 16 HELIX 22 AC4 ASN B 158 LEU B 179 1 22 HELIX 23 AC5 THR B 183 ALA B 203 1 21 HELIX 24 AC6 ASN B 206 ARG B 220 1 15 HELIX 25 AC7 LEU B 248 ALA B 252 5 5 HELIX 26 AC8 GLY B 276 GLN B 291 1 16 HELIX 27 AC9 ALA B 307 LEU B 317 1 11 HELIX 28 AD1 SER B 360 TYR B 372 1 13 HELIX 29 AD2 TYR B 398 ARG B 403 1 6 HELIX 30 AD3 MET B 438 GLU B 443 1 6 HELIX 31 AD4 GLY B 448 GLU B 452 5 5 HELIX 32 AD5 PHE B 475 ASP B 490 1 16 HELIX 33 AD6 ASP B 490 MET B 506 1 17 HELIX 34 AD7 ASP B 508 ARG B 510 5 3 HELIX 35 AD8 ASN B 516 GLY B 543 1 28 HELIX 36 AD9 LYS B 549 LEU B 553 5 5 HELIX 37 AE1 ASP B 561 GLU B 578 1 18 SHEET 1 AA1 2 THR B 145 ASN B 147 0 SHEET 2 AA1 2 ILE B 512 SER B 514 -1 O VAL B 513 N TYR B 146 SHEET 1 AA2 4 ASN B 227 LEU B 229 0 SHEET 2 AA2 4 SER B 411 TYR B 420 -1 O GLN B 413 N ASN B 227 SHEET 3 AA2 4 GLY B 322 ASP B 329 -1 N ARG B 328 O LYS B 418 SHEET 4 AA2 4 VAL B 334 ASP B 339 -1 O ASP B 337 N ILE B 324 SHEET 1 AA3 3 ASN B 227 LEU B 229 0 SHEET 2 AA3 3 SER B 411 TYR B 420 -1 O GLN B 413 N ASN B 227 SHEET 3 AA3 3 THR B 387 SER B 393 -1 N GLN B 390 O TYR B 414 SHEET 1 AA4 6 LYS B 254 VAL B 260 0 SHEET 2 AA4 6 GLU B 263 ASP B 269 -1 O ASP B 269 N LYS B 254 SHEET 3 AA4 6 VAL B 296 ASP B 299 1 O ASP B 299 N LEU B 268 SHEET 4 AA4 6 LEU B 350 VAL B 354 1 O LEU B 353 N ILE B 298 SHEET 5 AA4 6 LEU B 376 GLY B 379 1 O VAL B 378 N VAL B 352 SHEET 6 AA4 6 ILE B 436 ILE B 437 1 O ILE B 436 N VAL B 377 CRYST1 105.827 151.082 148.380 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009449 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006619 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006739 0.00000