HEADER OXIDOREDUCTASE 09-NOV-18 6IQV TITLE CRYSTAL STRUCTURE OF CELL SURFACE GLYCERALDEHYDE-3-PHOSPHATE TITLE 2 DEHYDROGENASE COMPLEXED WITH HG2+ FROM LACTOBACILLUS PLANTARUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE, TYPE I; COMPND 3 CHAIN: A, B, C, D; COMPND 4 EC: 1.2.1.12; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LACTOBACILLUS PLANTARUM SUBSP. PLANTARUM JCM SOURCE 3 1149; SOURCE 4 ORGANISM_TAXID: 525338; SOURCE 5 GENE: GAP, HMPREF0531_11006; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: ROSETTA2 PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28B KEYWDS OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR K.YONEDA,H.KINOSHITA REVDAT 3 22-NOV-23 6IQV 1 JRNL LINK REVDAT 2 15-MAY-19 6IQV 1 JRNL REVDAT 1 21-NOV-18 6IQV 0 JRNL AUTH K.YONEDA,M.OGATA,K.NISHIYAMA,K.FUKUDA,S.YASUDA,K.IGOSHI, JRNL AUTH 2 H.KINOSHITA JRNL TITL CRYSTAL STRUCTURE OF CELL SURFACE GLYCERALDEHYDE-3-PHOSPHATE JRNL TITL 2 DEHYDROGENASE FROM LACTOBACILLUS PLANTARUM: INSIGHT INTO THE JRNL TITL 3 MERCURY BINDING MECHANISM JRNL REF MILK SCI V. 68 3 2019 JRNL REFN ISSN 1343-0289 JRNL DOI 10.11465/MILK.68.3 REMARK 2 REMARK 2 RESOLUTION. 2.13 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.13 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 101.86 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 86296 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4550 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.13 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.18 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5736 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.27 REMARK 3 BIN R VALUE (WORKING SET) : 0.3000 REMARK 3 BIN FREE R VALUE SET COUNT : 320 REMARK 3 BIN FREE R VALUE : 0.3330 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 10078 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 43 REMARK 3 SOLVENT ATOMS : 604 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 37.34 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.21 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.04000 REMARK 3 B22 (A**2) : 0.08000 REMARK 3 B33 (A**2) : -0.04000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.215 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.194 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.163 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.528 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 10336 ; 0.018 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 14028 ; 1.970 ; 1.954 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1340 ; 7.706 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 439 ;43.559 ;24.989 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1704 ;16.897 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 48 ;16.414 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1662 ; 0.131 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7728 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5379 ; 3.684 ; 4.061 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6712 ; 5.090 ; 6.062 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4957 ; 4.837 ; 4.331 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 15468 ; 9.270 ;56.107 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 6IQV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-NOV-18. REMARK 100 THE DEPOSITION ID IS D_1300009750. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-MAY-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : AR-NE3A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0085 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 90883 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.130 REMARK 200 RESOLUTION RANGE LOW (A) : 101.860 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 9.100 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.13 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.17 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 6.80 REMARK 200 R MERGE FOR SHELL (I) : 0.52100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5J9G REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% (W/V) PEG 1500, 0.1M MIB BUFFER REMARK 280 (PH 5.0), VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 74.61750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 74.61750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 63.02150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 86.47450 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 63.02150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 86.47450 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 74.61750 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 63.02150 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 86.47450 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 74.61750 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 63.02150 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 86.47450 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 17970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 45160 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -297.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH C 615 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 SER B 29 REMARK 465 ASP B 30 REMARK 465 GLY C 25 REMARK 465 GLU C 26 REMARK 465 LYS C 27 REMARK 465 SER C 28 REMARK 465 SER C 29 REMARK 465 ASP C 30 REMARK 465 ILE C 31 REMARK 465 VAL C 90 REMARK 465 LYS C 91 REMARK 465 ASN C 92 REMARK 465 ASP C 93 REMARK 465 GLY C 94 REMARK 465 VAL C 95 REMARK 465 ASP C 96 REMARK 465 LYS D 27 REMARK 465 SER D 28 REMARK 465 SER D 29 REMARK 465 ASP D 30 REMARK 465 ILE D 31 REMARK 465 PRO D 127 REMARK 465 ALA D 128 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SG CYS A 101 HG HG A 404 1.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 47 NE2 HIS A 47 CD2 -0.068 REMARK 500 HIS A 55 NE2 HIS A 55 CD2 -0.067 REMARK 500 HIS A 270 NE2 HIS A 270 CD2 -0.074 REMARK 500 LEU A 340 C LEU A 340 OXT -0.147 REMARK 500 HIS B 270 NE2 HIS B 270 CD2 -0.073 REMARK 500 HIS C 55 NE2 HIS C 55 CD2 -0.080 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ILE B 31 N - CA - C ANGL. DEV. = -40.1 DEGREES REMARK 500 CYS B 156 CA - CB - SG ANGL. DEV. = 6.9 DEGREES REMARK 500 PRO C 82 C - N - CD ANGL. DEV. = -15.5 DEGREES REMARK 500 CYS C 156 CA - CB - SG ANGL. DEV. = 6.7 DEGREES REMARK 500 PRO D 88 C - N - CD ANGL. DEV. = -15.1 DEGREES REMARK 500 TYR D 105 N - CA - C ANGL. DEV. = -16.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 2 155.07 -44.33 REMARK 500 PHE A 10 48.17 -99.89 REMARK 500 LYS A 27 55.23 -119.68 REMARK 500 SER A 28 122.17 -25.60 REMARK 500 ASP A 30 69.12 65.64 REMARK 500 THR A 65 -168.59 -114.39 REMARK 500 ASP A 67 20.99 -140.82 REMARK 500 ASP A 96 -60.41 -96.46 REMARK 500 THR A 106 42.34 -80.43 REMARK 500 SER A 125 33.10 -80.02 REMARK 500 ALA A 128 39.84 -141.28 REMARK 500 GLU A 323 -69.00 -93.05 REMARK 500 PHE B 10 49.60 -96.95 REMARK 500 THR B 65 -164.63 -129.15 REMARK 500 THR B 106 36.36 -96.95 REMARK 500 SER B 125 42.11 -91.97 REMARK 500 ALA B 128 27.08 -145.49 REMARK 500 VAL B 139 -65.55 -122.64 REMARK 500 SER B 296 135.43 -171.12 REMARK 500 GLU B 323 -68.89 -91.49 REMARK 500 PHE C 10 52.59 -95.61 REMARK 500 THR C 65 -156.27 -135.22 REMARK 500 ASP C 67 18.99 -144.61 REMARK 500 ASN C 72 39.71 39.54 REMARK 500 THR C 106 41.58 -77.71 REMARK 500 SER C 125 40.41 -87.13 REMARK 500 GLU C 323 -63.15 -97.25 REMARK 500 THR C 339 24.81 -77.52 REMARK 500 PHE D 10 52.98 -94.10 REMARK 500 THR D 65 -164.74 -122.13 REMARK 500 LYS D 91 -73.84 -54.03 REMARK 500 THR D 106 39.52 -177.56 REMARK 500 ASN D 140 28.05 -140.20 REMARK 500 GLU D 323 -65.45 -90.79 REMARK 500 ALA D 338 -38.53 -38.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS A 27 SER A 28 -143.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A 402 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 160 SG REMARK 620 2 THR A 248 OG1 83.7 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG B 403 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 160 O REMARK 620 2 CYS B 160 SG 71.1 REMARK 620 3 THR B 248 OG1 135.8 80.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG C 403 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR C 248 OG1 REMARK 620 2 HOH C 505 O 45.4 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG D 402 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 100 O REMARK 620 2 CYS D 101 SG 81.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG D 403 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 160 SG REMARK 620 2 THR D 248 OG1 98.4 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HG A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HG A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HG A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TRS B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HG B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HG B 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HG B 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HG C 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HG C 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO D 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HG D 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HG D 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HG D 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO D 405 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6IQM RELATED DB: PDB REMARK 900 6IQM CONTAINS THE SAME ENZYME COMPLEXED WITH NAD. DBREF 6IQV A 1 340 UNP D7VA33 D7VA33_LACPN 20 359 DBREF 6IQV B 1 340 UNP D7VA33 D7VA33_LACPN 20 359 DBREF 6IQV C 1 340 UNP D7VA33 D7VA33_LACPN 20 359 DBREF 6IQV D 1 340 UNP D7VA33 D7VA33_LACPN 20 359 SEQRES 1 A 340 MET SER VAL LYS ILE GLY ILE ASN GLY PHE GLY ARG ILE SEQRES 2 A 340 GLY ARG LEU ALA PHE ARG ARG ILE LEU GLU LEU GLY GLU SEQRES 3 A 340 LYS SER SER ASP ILE GLU VAL VAL ALA ILE ASN ASP LEU SEQRES 4 A 340 THR SER PRO ALA LEU LEU ALA HIS LEU LEU LYS TYR ASP SEQRES 5 A 340 SER THR HIS GLY THR LEU ASN ALA ASP VAL SER ALA THR SEQRES 6 A 340 ASP ASP SER ILE VAL VAL ASN GLY LYS ASN TYR ARG VAL SEQRES 7 A 340 TYR ALA GLU PRO GLN ALA GLN ASN ILE PRO TRP VAL LYS SEQRES 8 A 340 ASN ASP GLY VAL ASP PHE VAL LEU GLU CYS THR GLY PHE SEQRES 9 A 340 TYR THR SER LYS ALA LYS SER GLN ALA HIS LEU ASP ALA SEQRES 10 A 340 GLY ALA LYS ARG VAL LEU ILE SER ALA PRO ALA GLY SER SEQRES 11 A 340 ASP LEU LYS THR ILE VAL TYR ASN VAL ASN ASP ASP ILE SEQRES 12 A 340 LEU THR ALA ASP ASP ARG ILE VAL SER ALA GLY SER CYS SEQRES 13 A 340 THR THR ASN CYS LEU ALA PRO LEU ALA PHE PHE GLU ASN SEQRES 14 A 340 LYS GLU PHE GLY ILE LYS VAL GLY THR MET THR THR ILE SEQRES 15 A 340 HIS ALA TYR THR SER THR GLN MET LEU LEU ASP GLY PRO SEQRES 16 A 340 VAL ARG GLY GLY ASN PHE ARG ALA ALA ARG ALA ALA GLY SEQRES 17 A 340 VAL ASN THR ILE PRO HIS SER THR GLY ALA ALA LYS ALA SEQRES 18 A 340 LEU GLY LEU VAL ILE PRO GLU LEU ASN GLY LYS LEU GLN SEQRES 19 A 340 GLY HIS ALA GLN ARG VAL GLY VAL VAL ASP GLY SER LEU SEQRES 20 A 340 THR GLU LEU VAL ALA ILE LEU ASP LYS LYS VAL THR ALA SEQRES 21 A 340 ASP GLU VAL ASN ALA ALA ILE LYS LYS HIS THR GLU GLY SEQRES 22 A 340 ASN GLU SER PHE GLY TYR ASN ASP ASP GLU ILE VAL SER SEQRES 23 A 340 SER ASP VAL ILE GLY THR THR PHE GLY SER ILE PHE ASP SEQRES 24 A 340 PRO THR GLN THR GLU VAL THR SER ASP GLY ASP ASN GLN SEQRES 25 A 340 LEU VAL LYS THR VAL ALA TRP TYR ASP ASN GLU TYR GLY SEQRES 26 A 340 PHE THR CYS GLN MET VAL ARG THR LEU LEU LYS PHE ALA SEQRES 27 A 340 THR LEU SEQRES 1 B 340 MET SER VAL LYS ILE GLY ILE ASN GLY PHE GLY ARG ILE SEQRES 2 B 340 GLY ARG LEU ALA PHE ARG ARG ILE LEU GLU LEU GLY GLU SEQRES 3 B 340 LYS SER SER ASP ILE GLU VAL VAL ALA ILE ASN ASP LEU SEQRES 4 B 340 THR SER PRO ALA LEU LEU ALA HIS LEU LEU LYS TYR ASP SEQRES 5 B 340 SER THR HIS GLY THR LEU ASN ALA ASP VAL SER ALA THR SEQRES 6 B 340 ASP ASP SER ILE VAL VAL ASN GLY LYS ASN TYR ARG VAL SEQRES 7 B 340 TYR ALA GLU PRO GLN ALA GLN ASN ILE PRO TRP VAL LYS SEQRES 8 B 340 ASN ASP GLY VAL ASP PHE VAL LEU GLU CYS THR GLY PHE SEQRES 9 B 340 TYR THR SER LYS ALA LYS SER GLN ALA HIS LEU ASP ALA SEQRES 10 B 340 GLY ALA LYS ARG VAL LEU ILE SER ALA PRO ALA GLY SER SEQRES 11 B 340 ASP LEU LYS THR ILE VAL TYR ASN VAL ASN ASP ASP ILE SEQRES 12 B 340 LEU THR ALA ASP ASP ARG ILE VAL SER ALA GLY SER CYS SEQRES 13 B 340 THR THR ASN CYS LEU ALA PRO LEU ALA PHE PHE GLU ASN SEQRES 14 B 340 LYS GLU PHE GLY ILE LYS VAL GLY THR MET THR THR ILE SEQRES 15 B 340 HIS ALA TYR THR SER THR GLN MET LEU LEU ASP GLY PRO SEQRES 16 B 340 VAL ARG GLY GLY ASN PHE ARG ALA ALA ARG ALA ALA GLY SEQRES 17 B 340 VAL ASN THR ILE PRO HIS SER THR GLY ALA ALA LYS ALA SEQRES 18 B 340 LEU GLY LEU VAL ILE PRO GLU LEU ASN GLY LYS LEU GLN SEQRES 19 B 340 GLY HIS ALA GLN ARG VAL GLY VAL VAL ASP GLY SER LEU SEQRES 20 B 340 THR GLU LEU VAL ALA ILE LEU ASP LYS LYS VAL THR ALA SEQRES 21 B 340 ASP GLU VAL ASN ALA ALA ILE LYS LYS HIS THR GLU GLY SEQRES 22 B 340 ASN GLU SER PHE GLY TYR ASN ASP ASP GLU ILE VAL SER SEQRES 23 B 340 SER ASP VAL ILE GLY THR THR PHE GLY SER ILE PHE ASP SEQRES 24 B 340 PRO THR GLN THR GLU VAL THR SER ASP GLY ASP ASN GLN SEQRES 25 B 340 LEU VAL LYS THR VAL ALA TRP TYR ASP ASN GLU TYR GLY SEQRES 26 B 340 PHE THR CYS GLN MET VAL ARG THR LEU LEU LYS PHE ALA SEQRES 27 B 340 THR LEU SEQRES 1 C 340 MET SER VAL LYS ILE GLY ILE ASN GLY PHE GLY ARG ILE SEQRES 2 C 340 GLY ARG LEU ALA PHE ARG ARG ILE LEU GLU LEU GLY GLU SEQRES 3 C 340 LYS SER SER ASP ILE GLU VAL VAL ALA ILE ASN ASP LEU SEQRES 4 C 340 THR SER PRO ALA LEU LEU ALA HIS LEU LEU LYS TYR ASP SEQRES 5 C 340 SER THR HIS GLY THR LEU ASN ALA ASP VAL SER ALA THR SEQRES 6 C 340 ASP ASP SER ILE VAL VAL ASN GLY LYS ASN TYR ARG VAL SEQRES 7 C 340 TYR ALA GLU PRO GLN ALA GLN ASN ILE PRO TRP VAL LYS SEQRES 8 C 340 ASN ASP GLY VAL ASP PHE VAL LEU GLU CYS THR GLY PHE SEQRES 9 C 340 TYR THR SER LYS ALA LYS SER GLN ALA HIS LEU ASP ALA SEQRES 10 C 340 GLY ALA LYS ARG VAL LEU ILE SER ALA PRO ALA GLY SER SEQRES 11 C 340 ASP LEU LYS THR ILE VAL TYR ASN VAL ASN ASP ASP ILE SEQRES 12 C 340 LEU THR ALA ASP ASP ARG ILE VAL SER ALA GLY SER CYS SEQRES 13 C 340 THR THR ASN CYS LEU ALA PRO LEU ALA PHE PHE GLU ASN SEQRES 14 C 340 LYS GLU PHE GLY ILE LYS VAL GLY THR MET THR THR ILE SEQRES 15 C 340 HIS ALA TYR THR SER THR GLN MET LEU LEU ASP GLY PRO SEQRES 16 C 340 VAL ARG GLY GLY ASN PHE ARG ALA ALA ARG ALA ALA GLY SEQRES 17 C 340 VAL ASN THR ILE PRO HIS SER THR GLY ALA ALA LYS ALA SEQRES 18 C 340 LEU GLY LEU VAL ILE PRO GLU LEU ASN GLY LYS LEU GLN SEQRES 19 C 340 GLY HIS ALA GLN ARG VAL GLY VAL VAL ASP GLY SER LEU SEQRES 20 C 340 THR GLU LEU VAL ALA ILE LEU ASP LYS LYS VAL THR ALA SEQRES 21 C 340 ASP GLU VAL ASN ALA ALA ILE LYS LYS HIS THR GLU GLY SEQRES 22 C 340 ASN GLU SER PHE GLY TYR ASN ASP ASP GLU ILE VAL SER SEQRES 23 C 340 SER ASP VAL ILE GLY THR THR PHE GLY SER ILE PHE ASP SEQRES 24 C 340 PRO THR GLN THR GLU VAL THR SER ASP GLY ASP ASN GLN SEQRES 25 C 340 LEU VAL LYS THR VAL ALA TRP TYR ASP ASN GLU TYR GLY SEQRES 26 C 340 PHE THR CYS GLN MET VAL ARG THR LEU LEU LYS PHE ALA SEQRES 27 C 340 THR LEU SEQRES 1 D 340 MET SER VAL LYS ILE GLY ILE ASN GLY PHE GLY ARG ILE SEQRES 2 D 340 GLY ARG LEU ALA PHE ARG ARG ILE LEU GLU LEU GLY GLU SEQRES 3 D 340 LYS SER SER ASP ILE GLU VAL VAL ALA ILE ASN ASP LEU SEQRES 4 D 340 THR SER PRO ALA LEU LEU ALA HIS LEU LEU LYS TYR ASP SEQRES 5 D 340 SER THR HIS GLY THR LEU ASN ALA ASP VAL SER ALA THR SEQRES 6 D 340 ASP ASP SER ILE VAL VAL ASN GLY LYS ASN TYR ARG VAL SEQRES 7 D 340 TYR ALA GLU PRO GLN ALA GLN ASN ILE PRO TRP VAL LYS SEQRES 8 D 340 ASN ASP GLY VAL ASP PHE VAL LEU GLU CYS THR GLY PHE SEQRES 9 D 340 TYR THR SER LYS ALA LYS SER GLN ALA HIS LEU ASP ALA SEQRES 10 D 340 GLY ALA LYS ARG VAL LEU ILE SER ALA PRO ALA GLY SER SEQRES 11 D 340 ASP LEU LYS THR ILE VAL TYR ASN VAL ASN ASP ASP ILE SEQRES 12 D 340 LEU THR ALA ASP ASP ARG ILE VAL SER ALA GLY SER CYS SEQRES 13 D 340 THR THR ASN CYS LEU ALA PRO LEU ALA PHE PHE GLU ASN SEQRES 14 D 340 LYS GLU PHE GLY ILE LYS VAL GLY THR MET THR THR ILE SEQRES 15 D 340 HIS ALA TYR THR SER THR GLN MET LEU LEU ASP GLY PRO SEQRES 16 D 340 VAL ARG GLY GLY ASN PHE ARG ALA ALA ARG ALA ALA GLY SEQRES 17 D 340 VAL ASN THR ILE PRO HIS SER THR GLY ALA ALA LYS ALA SEQRES 18 D 340 LEU GLY LEU VAL ILE PRO GLU LEU ASN GLY LYS LEU GLN SEQRES 19 D 340 GLY HIS ALA GLN ARG VAL GLY VAL VAL ASP GLY SER LEU SEQRES 20 D 340 THR GLU LEU VAL ALA ILE LEU ASP LYS LYS VAL THR ALA SEQRES 21 D 340 ASP GLU VAL ASN ALA ALA ILE LYS LYS HIS THR GLU GLY SEQRES 22 D 340 ASN GLU SER PHE GLY TYR ASN ASP ASP GLU ILE VAL SER SEQRES 23 D 340 SER ASP VAL ILE GLY THR THR PHE GLY SER ILE PHE ASP SEQRES 24 D 340 PRO THR GLN THR GLU VAL THR SER ASP GLY ASP ASN GLN SEQRES 25 D 340 LEU VAL LYS THR VAL ALA TRP TYR ASP ASN GLU TYR GLY SEQRES 26 D 340 PHE THR CYS GLN MET VAL ARG THR LEU LEU LYS PHE ALA SEQRES 27 D 340 THR LEU HET EDO A 401 4 HET HG A 402 1 HET HG A 403 1 HET HG A 404 1 HET EDO A 405 4 HET TRS B 401 8 HET EDO B 402 4 HET HG B 403 1 HET HG B 404 1 HET HG B 405 1 HET EDO C 401 4 HET HG C 402 1 HET HG C 403 1 HET EDO D 401 4 HET HG D 402 1 HET HG D 403 1 HET HG D 404 1 HET EDO D 405 4 HETNAM EDO 1,2-ETHANEDIOL HETNAM HG MERCURY (II) ION HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETSYN EDO ETHYLENE GLYCOL HETSYN TRS TRIS BUFFER FORMUL 5 EDO 6(C2 H6 O2) FORMUL 6 HG 11(HG 2+) FORMUL 10 TRS C4 H12 N O3 1+ FORMUL 23 HOH *604(H2 O) HELIX 1 AA1 GLY A 11 LYS A 27 1 17 HELIX 2 AA2 SER A 41 TYR A 51 1 11 HELIX 3 AA3 GLN A 83 ILE A 87 5 5 HELIX 4 AA4 PRO A 88 GLY A 94 1 7 HELIX 5 AA5 SER A 107 ALA A 117 1 11 HELIX 6 AA6 ASN A 140 LEU A 144 5 5 HELIX 7 AA7 SER A 155 GLY A 173 1 19 HELIX 8 AA8 ALA A 221 VAL A 225 5 5 HELIX 9 AA9 ILE A 226 ASN A 230 5 5 HELIX 10 AB1 THR A 259 HIS A 270 1 12 HELIX 11 AB2 VAL A 285 ILE A 290 5 6 HELIX 12 AB3 PRO A 300 THR A 303 5 4 HELIX 13 AB4 GLU A 323 ALA A 338 1 16 HELIX 14 AB5 GLY B 11 GLY B 25 1 15 HELIX 15 AB6 SER B 41 TYR B 51 1 11 HELIX 16 AB7 GLN B 83 ILE B 87 5 5 HELIX 17 AB8 PRO B 88 GLY B 94 1 7 HELIX 18 AB9 SER B 107 ALA B 117 1 11 HELIX 19 AC1 ASN B 140 LEU B 144 5 5 HELIX 20 AC2 SER B 155 GLY B 173 1 19 HELIX 21 AC3 ALA B 206 ASN B 210 5 5 HELIX 22 AC4 ALA B 221 VAL B 225 5 5 HELIX 23 AC5 ILE B 226 ASN B 230 5 5 HELIX 24 AC6 THR B 259 HIS B 270 1 12 HELIX 25 AC7 VAL B 285 ILE B 290 5 6 HELIX 26 AC8 PRO B 300 THR B 303 5 4 HELIX 27 AC9 GLU B 323 THR B 339 1 17 HELIX 28 AD1 GLY C 11 LEU C 24 1 14 HELIX 29 AD2 SER C 41 TYR C 51 1 11 HELIX 30 AD3 GLN C 83 ILE C 87 5 5 HELIX 31 AD4 SER C 111 ALA C 117 1 7 HELIX 32 AD5 ASN C 140 LEU C 144 5 5 HELIX 33 AD6 SER C 155 GLY C 173 1 19 HELIX 34 AD7 ALA C 206 ASN C 210 5 5 HELIX 35 AD8 ALA C 221 VAL C 225 5 5 HELIX 36 AD9 ILE C 226 ASN C 230 5 5 HELIX 37 AE1 THR C 259 LYS C 269 1 11 HELIX 38 AE2 VAL C 285 ILE C 290 5 6 HELIX 39 AE3 PRO C 300 THR C 303 5 4 HELIX 40 AE4 GLU C 323 PHE C 337 1 15 HELIX 41 AE5 ALA C 338 LEU C 340 5 3 HELIX 42 AE6 GLY D 11 GLY D 25 1 15 HELIX 43 AE7 SER D 41 TYR D 51 1 11 HELIX 44 AE8 GLN D 83 ILE D 87 5 5 HELIX 45 AE9 SER D 107 ASP D 116 1 10 HELIX 46 AF1 ASN D 140 LEU D 144 5 5 HELIX 47 AF2 THR D 157 GLY D 173 1 17 HELIX 48 AF3 ALA D 219 VAL D 225 5 7 HELIX 49 AF4 ILE D 226 ASN D 230 5 5 HELIX 50 AF5 THR D 259 HIS D 270 1 12 HELIX 51 AF6 VAL D 285 ILE D 290 5 6 HELIX 52 AF7 PRO D 300 THR D 303 5 4 HELIX 53 AF8 GLU D 323 THR D 339 1 17 SHEET 1 AA1 8 VAL A 62 ALA A 64 0 SHEET 2 AA1 8 SER A 68 VAL A 71 -1 O VAL A 70 N SER A 63 SHEET 3 AA1 8 LYS A 74 TYR A 79 -1 O LYS A 74 N VAL A 71 SHEET 4 AA1 8 ILE A 31 ASN A 37 1 N ILE A 36 O TYR A 79 SHEET 5 AA1 8 VAL A 3 ASN A 8 1 N ILE A 5 O GLU A 32 SHEET 6 AA1 8 PHE A 97 GLU A 100 1 O LEU A 99 N GLY A 6 SHEET 7 AA1 8 ARG A 121 ILE A 124 1 O LEU A 123 N GLU A 100 SHEET 8 AA1 8 ILE A 150 SER A 152 1 O VAL A 151 N ILE A 124 SHEET 1 AA2 7 ILE A 212 HIS A 214 0 SHEET 2 AA2 7 LEU A 233 VAL A 240 -1 O ARG A 239 N ILE A 212 SHEET 3 AA2 7 ILE A 174 ALA A 184 1 N HIS A 183 O VAL A 240 SHEET 4 AA2 7 SER A 246 LEU A 254 -1 O VAL A 251 N THR A 178 SHEET 5 AA2 7 ASN A 311 TYR A 320 -1 O THR A 316 N LEU A 250 SHEET 6 AA2 7 SER A 296 PHE A 298 -1 N ILE A 297 O TRP A 319 SHEET 7 AA2 7 PHE A 277 TYR A 279 1 N GLY A 278 O SER A 296 SHEET 1 AA3 6 ILE A 212 HIS A 214 0 SHEET 2 AA3 6 LEU A 233 VAL A 240 -1 O ARG A 239 N ILE A 212 SHEET 3 AA3 6 ILE A 174 ALA A 184 1 N HIS A 183 O VAL A 240 SHEET 4 AA3 6 SER A 246 LEU A 254 -1 O VAL A 251 N THR A 178 SHEET 5 AA3 6 ASN A 311 TYR A 320 -1 O THR A 316 N LEU A 250 SHEET 6 AA3 6 GLU A 304 ASP A 308 -1 N GLU A 304 O LYS A 315 SHEET 1 AA4 9 VAL B 62 ALA B 64 0 SHEET 2 AA4 9 SER B 68 VAL B 71 -1 O VAL B 70 N SER B 63 SHEET 3 AA4 9 LYS B 74 TYR B 79 -1 O TYR B 76 N ILE B 69 SHEET 4 AA4 9 GLU B 32 ASN B 37 1 N ILE B 36 O ARG B 77 SHEET 5 AA4 9 LYS B 4 ASN B 8 1 N ILE B 5 O GLU B 32 SHEET 6 AA4 9 PHE B 97 GLU B 100 1 O LEU B 99 N GLY B 6 SHEET 7 AA4 9 ARG B 121 ILE B 124 1 O LEU B 123 N GLU B 100 SHEET 8 AA4 9 ILE B 150 SER B 152 1 O VAL B 151 N ILE B 124 SHEET 9 AA4 9 LYS B 133 THR B 134 1 N LYS B 133 O SER B 152 SHEET 1 AA5 7 ILE B 212 HIS B 214 0 SHEET 2 AA5 7 LEU B 233 VAL B 240 -1 O ARG B 239 N ILE B 212 SHEET 3 AA5 7 ILE B 174 ALA B 184 1 N THR B 181 O GLN B 238 SHEET 4 AA5 7 SER B 246 LEU B 254 -1 O VAL B 251 N THR B 178 SHEET 5 AA5 7 ASN B 311 TYR B 320 -1 O THR B 316 N LEU B 250 SHEET 6 AA5 7 SER B 296 PHE B 298 -1 N ILE B 297 O TRP B 319 SHEET 7 AA5 7 PHE B 277 TYR B 279 1 N GLY B 278 O SER B 296 SHEET 1 AA6 6 ILE B 212 HIS B 214 0 SHEET 2 AA6 6 LEU B 233 VAL B 240 -1 O ARG B 239 N ILE B 212 SHEET 3 AA6 6 ILE B 174 ALA B 184 1 N THR B 181 O GLN B 238 SHEET 4 AA6 6 SER B 246 LEU B 254 -1 O VAL B 251 N THR B 178 SHEET 5 AA6 6 ASN B 311 TYR B 320 -1 O THR B 316 N LEU B 250 SHEET 6 AA6 6 GLU B 304 ASP B 308 -1 N THR B 306 O LEU B 313 SHEET 1 AA7 8 VAL C 62 ALA C 64 0 SHEET 2 AA7 8 SER C 68 VAL C 71 -1 O VAL C 70 N SER C 63 SHEET 3 AA7 8 LYS C 74 TYR C 79 -1 O TYR C 76 N ILE C 69 SHEET 4 AA7 8 VAL C 33 ASN C 37 1 N ILE C 36 O TYR C 79 SHEET 5 AA7 8 ILE C 5 ASN C 8 1 N ILE C 7 O ASN C 37 SHEET 6 AA7 8 VAL C 98 GLU C 100 1 O LEU C 99 N GLY C 6 SHEET 7 AA7 8 VAL C 122 ILE C 124 1 O LEU C 123 N VAL C 98 SHEET 8 AA7 8 ILE C 150 SER C 152 1 O VAL C 151 N ILE C 124 SHEET 1 AA8 7 ILE C 212 HIS C 214 0 SHEET 2 AA8 7 LEU C 233 VAL C 240 -1 O ARG C 239 N ILE C 212 SHEET 3 AA8 7 ILE C 174 ALA C 184 1 N HIS C 183 O VAL C 240 SHEET 4 AA8 7 SER C 246 LEU C 254 -1 O LEU C 247 N ILE C 182 SHEET 5 AA8 7 ASN C 311 TYR C 320 -1 O TYR C 320 N SER C 246 SHEET 6 AA8 7 SER C 296 PHE C 298 -1 N ILE C 297 O TRP C 319 SHEET 7 AA8 7 PHE C 277 TYR C 279 1 N GLY C 278 O SER C 296 SHEET 1 AA9 6 ILE C 212 HIS C 214 0 SHEET 2 AA9 6 LEU C 233 VAL C 240 -1 O ARG C 239 N ILE C 212 SHEET 3 AA9 6 ILE C 174 ALA C 184 1 N HIS C 183 O VAL C 240 SHEET 4 AA9 6 SER C 246 LEU C 254 -1 O LEU C 247 N ILE C 182 SHEET 5 AA9 6 ASN C 311 TYR C 320 -1 O TYR C 320 N SER C 246 SHEET 6 AA9 6 GLU C 304 ASP C 308 -1 N GLU C 304 O LYS C 315 SHEET 1 AB1 8 VAL D 62 ALA D 64 0 SHEET 2 AB1 8 SER D 68 VAL D 71 -1 O VAL D 70 N SER D 63 SHEET 3 AB1 8 LYS D 74 TYR D 79 -1 O TYR D 76 N ILE D 69 SHEET 4 AB1 8 VAL D 33 ASN D 37 1 N ILE D 36 O TYR D 79 SHEET 5 AB1 8 ILE D 5 ASN D 8 1 N ILE D 7 O ASN D 37 SHEET 6 AB1 8 PHE D 97 GLU D 100 1 O LEU D 99 N GLY D 6 SHEET 7 AB1 8 ARG D 121 ILE D 124 1 O LEU D 123 N GLU D 100 SHEET 8 AB1 8 ILE D 150 SER D 152 1 O VAL D 151 N ILE D 124 SHEET 1 AB2 7 ILE D 212 HIS D 214 0 SHEET 2 AB2 7 LEU D 233 VAL D 240 -1 O ALA D 237 N HIS D 214 SHEET 3 AB2 7 ILE D 174 ALA D 184 1 N HIS D 183 O VAL D 240 SHEET 4 AB2 7 SER D 246 LEU D 254 -1 O ILE D 253 N LYS D 175 SHEET 5 AB2 7 ASN D 311 TYR D 320 -1 O THR D 316 N LEU D 250 SHEET 6 AB2 7 SER D 296 PHE D 298 -1 N ILE D 297 O TRP D 319 SHEET 7 AB2 7 PHE D 277 TYR D 279 1 N GLY D 278 O SER D 296 SHEET 1 AB3 6 ILE D 212 HIS D 214 0 SHEET 2 AB3 6 LEU D 233 VAL D 240 -1 O ALA D 237 N HIS D 214 SHEET 3 AB3 6 ILE D 174 ALA D 184 1 N HIS D 183 O VAL D 240 SHEET 4 AB3 6 SER D 246 LEU D 254 -1 O ILE D 253 N LYS D 175 SHEET 5 AB3 6 ASN D 311 TYR D 320 -1 O THR D 316 N LEU D 250 SHEET 6 AB3 6 GLU D 304 ASP D 308 -1 N GLU D 304 O LYS D 315 LINK OG SER A 125 HG HG A 404 1555 1555 3.09 LINK SG CYS A 160 HG HG A 402 1555 1555 2.33 LINK OG1 THR A 248 HG HG A 402 1555 1555 3.12 LINK SG CYS A 328 HG HG A 403 1555 1555 3.12 LINK SG CYS B 101 HG HG B 405 1555 1555 2.88 LINK O CYS B 160 HG HG B 403 1555 1555 3.18 LINK SG CYS B 160 HG HG B 403 1555 1555 2.32 LINK OG1 THR B 248 HG HG B 403 1555 1555 2.93 LINK OG1 THR C 248 HG HG C 403 1555 1555 3.15 LINK SG CYS C 328 HG HG C 402 1555 1555 3.00 LINK HG HG C 403 O HOH C 505 1555 1555 3.16 LINK O GLU D 100 HG HG D 402 1555 1555 3.10 LINK SG CYS D 101 HG HG D 402 1555 1555 3.17 LINK SG CYS D 160 HG HG D 403 1555 1555 2.41 LINK OG1 THR D 248 HG HG D 403 1555 1555 2.81 SITE 1 AC1 4 HIS A 47 VAL A 62 HOH A 505 HOH D 506 SITE 1 AC2 4 CYS A 160 LEU A 161 THR A 248 ALA A 318 SITE 1 AC3 3 ARG A 20 TYR A 324 CYS A 328 SITE 1 AC4 3 ILE A 13 CYS A 101 SER A 125 SITE 1 AC5 7 ARG A 15 LEU A 16 ARG A 19 LEU A 48 SITE 2 AC5 7 LEU A 49 ASP A 52 HOH A 568 SITE 1 AC6 12 HOH A 552 HOH A 556 GLY B 208 GLY B 241 SITE 2 AC6 12 HOH B 557 HOH B 559 HOH B 587 HOH C 555 SITE 3 AC6 12 GLY D 208 GLY D 241 HOH D 526 HOH D 561 SITE 1 AC7 4 HIS B 47 VAL B 62 HOH B 530 ASP C 282 SITE 1 AC8 3 CYS B 160 LEU B 161 THR B 248 SITE 1 AC9 4 ARG B 20 TYR B 324 THR B 327 CYS B 328 SITE 1 AD1 3 GLY B 9 GLY B 11 CYS B 101 SITE 1 AD2 5 PHE A 201 HOH B 514 HIS C 47 VAL C 62 SITE 2 AD2 5 HOH C 502 SITE 1 AD3 3 ARG C 20 TYR C 324 CYS C 328 SITE 1 AD4 3 CYS C 160 LEU C 161 THR C 248 SITE 1 AD5 6 ASP A 282 HOH A 620 HIS D 47 VAL D 62 SITE 2 AD5 6 HOH D 524 HOH D 540 SITE 1 AD6 4 LEU D 99 GLU D 100 CYS D 101 MET D 330 SITE 1 AD7 3 CYS D 160 LEU D 161 THR D 248 SITE 1 AD8 4 ARG D 20 TYR D 324 THR D 327 CYS D 328 SITE 1 AD9 5 ARG D 15 ARG D 19 LEU D 48 TYR D 51 SITE 2 AD9 5 ASP D 52 CRYST1 126.043 172.949 149.235 90.00 90.00 90.00 C 2 2 21 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007934 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005782 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006701 0.00000