HEADER FLUORESCENT PROTEIN 12-NOV-18 6IR7 TITLE GREEN FLUORESCENT PROTEIN VARIANT GFPUV WITH THE MODIFICATION TO 6- TITLE 2 HYDROXYNORLEUCINE AT THE C-TERMINUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: GREEN FLUORESCENT PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AEQUOREA VICTORIA; SOURCE 3 ORGANISM_COMMON: JELLYFISH; SOURCE 4 ORGANISM_TAXID: 6100; SOURCE 5 GENE: GFP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET25B KEYWDS FLUORESCENT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.NAKATANI,N.YASUI,A.YAMASHITA REVDAT 2 22-NOV-23 6IR7 1 LINK REVDAT 1 03-APR-19 6IR7 0 JRNL AUTH T.NAKATANI,N.YASUI,I.TAMURA,A.YAMASHITA JRNL TITL SPECIFIC MODIFICATION AT THE C-TERMINAL LYSINE RESIDUE OF JRNL TITL 2 THE GREEN FLUORESCENT PROTEIN VARIANT, GFPUV, EXPRESSED IN JRNL TITL 3 ESCHERICHIA COLI. JRNL REF SCI REP V. 9 4722 2019 JRNL REFN ESSN 2045-2322 JRNL PMID 30886277 JRNL DOI 10.1038/S41598-019-41309-8 REMARK 2 REMARK 2 RESOLUTION. 1.28 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.28 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.65 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.400 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 3 NUMBER OF REFLECTIONS : 56891 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 2889 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.6819 - 3.5219 0.95 2635 146 0.1912 0.2265 REMARK 3 2 3.5219 - 2.7956 0.95 2563 124 0.1850 0.1813 REMARK 3 3 2.7956 - 2.4422 0.98 2603 160 0.1800 0.1960 REMARK 3 4 2.4422 - 2.2189 0.99 2679 122 0.1716 0.1979 REMARK 3 5 2.2189 - 2.0599 0.98 2613 140 0.1595 0.1834 REMARK 3 6 2.0599 - 1.9384 0.98 2607 161 0.1565 0.1892 REMARK 3 7 1.9384 - 1.8413 0.99 2652 133 0.1639 0.1785 REMARK 3 8 1.8413 - 1.7612 0.98 2599 146 0.1635 0.1836 REMARK 3 9 1.7612 - 1.6934 0.98 2590 163 0.1620 0.1803 REMARK 3 10 1.6934 - 1.6349 0.96 2549 137 0.1615 0.1675 REMARK 3 11 1.6349 - 1.5838 0.96 2567 146 0.1517 0.1844 REMARK 3 12 1.5838 - 1.5385 0.96 2554 151 0.1595 0.1966 REMARK 3 13 1.5385 - 1.4980 0.97 2567 142 0.1662 0.1895 REMARK 3 14 1.4980 - 1.4615 0.98 2603 126 0.1725 0.1957 REMARK 3 15 1.4615 - 1.4283 0.97 2576 126 0.1742 0.1900 REMARK 3 16 1.4283 - 1.3979 0.94 2498 137 0.1790 0.1958 REMARK 3 17 1.3979 - 1.3699 0.96 2563 136 0.1836 0.1719 REMARK 3 18 1.3699 - 1.3440 0.97 2539 135 0.1818 0.1943 REMARK 3 19 1.3440 - 1.3200 0.96 2591 126 0.1812 0.1962 REMARK 3 20 1.3200 - 1.2977 0.96 2540 135 0.1947 0.2005 REMARK 3 21 1.2977 - 1.2767 0.87 2314 97 0.1973 0.2121 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.110 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.240 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1978 REMARK 3 ANGLE : 1.140 2687 REMARK 3 CHIRALITY : 0.047 289 REMARK 3 PLANARITY : 0.006 347 REMARK 3 DIHEDRAL : 16.357 744 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 4 THROUGH 22 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.9092 -5.4770 -0.0566 REMARK 3 T TENSOR REMARK 3 T11: 0.0984 T22: 0.0784 REMARK 3 T33: 0.0918 T12: 0.0014 REMARK 3 T13: 0.0082 T23: -0.0221 REMARK 3 L TENSOR REMARK 3 L11: 3.4373 L22: 1.0720 REMARK 3 L33: 1.4019 L12: -0.4305 REMARK 3 L13: 1.3635 L23: -0.3450 REMARK 3 S TENSOR REMARK 3 S11: 0.0909 S12: -0.0242 S13: -0.1587 REMARK 3 S21: -0.1489 S22: 0.0327 S23: 0.0188 REMARK 3 S31: 0.0927 S32: -0.0993 S33: -0.1127 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 23 THROUGH 81 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.5271 -1.0166 5.6415 REMARK 3 T TENSOR REMARK 3 T11: 0.0918 T22: 0.0800 REMARK 3 T33: 0.0918 T12: 0.0052 REMARK 3 T13: 0.0001 T23: -0.0113 REMARK 3 L TENSOR REMARK 3 L11: 0.8478 L22: 0.6910 REMARK 3 L33: 0.9118 L12: 0.1346 REMARK 3 L13: -0.0795 L23: -0.1314 REMARK 3 S TENSOR REMARK 3 S11: -0.0014 S12: -0.0130 S13: -0.0094 REMARK 3 S21: -0.0224 S22: 0.0063 S23: -0.0078 REMARK 3 S31: 0.0355 S32: -0.0197 S33: -0.0140 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 82 THROUGH 128 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.0878 -5.4080 -0.2713 REMARK 3 T TENSOR REMARK 3 T11: 0.0965 T22: 0.0797 REMARK 3 T33: 0.0902 T12: -0.0029 REMARK 3 T13: 0.0037 T23: -0.0050 REMARK 3 L TENSOR REMARK 3 L11: 1.3793 L22: 0.4724 REMARK 3 L33: 1.0713 L12: -0.1422 REMARK 3 L13: 0.5334 L23: -0.1625 REMARK 3 S TENSOR REMARK 3 S11: -0.0042 S12: 0.0664 S13: -0.0821 REMARK 3 S21: -0.0405 S22: 0.0083 S23: -0.0555 REMARK 3 S31: 0.0238 S32: 0.0425 S33: -0.0111 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 129 THROUGH 147 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.2163 1.4657 18.3210 REMARK 3 T TENSOR REMARK 3 T11: 0.1197 T22: 0.1369 REMARK 3 T33: 0.1093 T12: -0.0017 REMARK 3 T13: -0.0117 T23: -0.0185 REMARK 3 L TENSOR REMARK 3 L11: 1.2947 L22: 1.0059 REMARK 3 L33: 1.2031 L12: -0.4433 REMARK 3 L13: -0.5332 L23: 0.3752 REMARK 3 S TENSOR REMARK 3 S11: -0.1670 S12: -0.2674 S13: 0.0483 REMARK 3 S21: 0.1870 S22: 0.1557 S23: -0.1476 REMARK 3 S31: -0.0071 S32: 0.1072 S33: 0.0227 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 148 THROUGH 198 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.4104 4.2487 -1.6791 REMARK 3 T TENSOR REMARK 3 T11: 0.1025 T22: 0.0967 REMARK 3 T33: 0.1194 T12: -0.0063 REMARK 3 T13: 0.0156 T23: -0.0030 REMARK 3 L TENSOR REMARK 3 L11: 0.9480 L22: 0.8272 REMARK 3 L33: 0.8750 L12: 0.1645 REMARK 3 L13: 0.1893 L23: -0.3009 REMARK 3 S TENSOR REMARK 3 S11: 0.0153 S12: 0.0283 S13: 0.0132 REMARK 3 S21: -0.0763 S22: 0.0029 S23: -0.0979 REMARK 3 S31: -0.0225 S32: 0.0584 S33: -0.0298 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 199 THROUGH 237 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.3818 8.9965 4.2815 REMARK 3 T TENSOR REMARK 3 T11: 0.1097 T22: 0.1024 REMARK 3 T33: 0.0999 T12: -0.0062 REMARK 3 T13: 0.0083 T23: -0.0045 REMARK 3 L TENSOR REMARK 3 L11: 0.4874 L22: 0.3532 REMARK 3 L33: 0.1262 L12: -0.2969 REMARK 3 L13: 0.2317 L23: -0.0307 REMARK 3 S TENSOR REMARK 3 S11: 0.0168 S12: 0.0228 S13: 0.0634 REMARK 3 S21: 0.0469 S22: 0.0179 S23: 0.0278 REMARK 3 S31: -0.0852 S32: -0.0383 S33: -0.0398 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6IR7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 29-NOV-18. REMARK 100 THE DEPOSITION ID IS D_1300009673. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-JUL-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56911 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.280 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 200 DATA REDUNDANCY : 3.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07100 REMARK 200 FOR THE DATA SET : 27.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.28 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.4 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.24800 REMARK 200 FOR SHELL : 7.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1B9C REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM SULFATE, 0.1 M MES PH REMARK 280 6.5, 30% PEGMME5000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 25.57600 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 SER A 2 REMARK 465 LYS A 3 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 CRO A 66 CG1 REMARK 470 ARG A 80 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 531 O HOH A 604 2.13 REMARK 500 O HOH A 582 O HOH A 671 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 103 -154.42 -150.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 765 DISTANCE = 5.86 ANGSTROMS REMARK 525 HOH A 766 DISTANCE = 5.90 ANGSTROMS REMARK 525 HOH A 767 DISTANCE = 6.10 ANGSTROMS REMARK 525 HOH A 768 DISTANCE = 6.36 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue LDO A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MES A 303 REMARK 999 REMARK 999 SEQUENCE REMARK 999 RESIDUE THR 65 HAS BEEN MUTATED TO SER 65. RESIDUES SER 65, TYR 66 REMARK 999 AND GLY 67 CONSTITUTE THE CHROMOPHORE CRO 66 DBREF 6IR7 A 2 237 UNP P42212 GFP_AEQVI 2 237 SEQADV 6IR7 GLY A 1 UNP P42212 EXPRESSION TAG SEQADV 6IR7 CRO A 66 UNP P42212 SER 65 CHROMOPHORE SEQADV 6IR7 CRO A 66 UNP P42212 TYR 66 CHROMOPHORE SEQADV 6IR7 CRO A 66 UNP P42212 GLY 67 CHROMOPHORE SEQADV 6IR7 ARG A 80 UNP P42212 GLN 80 ENGINEERED MUTATION SEQADV 6IR7 SER A 99 UNP P42212 PHE 99 ENGINEERED MUTATION SEQADV 6IR7 THR A 153 UNP P42212 MET 153 ENGINEERED MUTATION SEQADV 6IR7 ALA A 163 UNP P42212 VAL 163 ENGINEERED MUTATION SEQADV 6IR7 LYS A 206 UNP P42212 ALA 206 ENGINEERED MUTATION SEQRES 1 A 235 GLY SER LYS GLY GLU GLU LEU PHE THR GLY VAL VAL PRO SEQRES 2 A 235 ILE LEU VAL GLU LEU ASP GLY ASP VAL ASN GLY HIS LYS SEQRES 3 A 235 PHE SER VAL SER GLY GLU GLY GLU GLY ASP ALA THR TYR SEQRES 4 A 235 GLY LYS LEU THR LEU LYS PHE ILE CYS THR THR GLY LYS SEQRES 5 A 235 LEU PRO VAL PRO TRP PRO THR LEU VAL THR THR PHE CRO SEQRES 6 A 235 VAL GLN CYS PHE SER ARG TYR PRO ASP HIS MET LYS ARG SEQRES 7 A 235 HIS ASP PHE PHE LYS SER ALA MET PRO GLU GLY TYR VAL SEQRES 8 A 235 GLN GLU ARG THR ILE SER PHE LYS ASP ASP GLY ASN TYR SEQRES 9 A 235 LYS THR ARG ALA GLU VAL LYS PHE GLU GLY ASP THR LEU SEQRES 10 A 235 VAL ASN ARG ILE GLU LEU LYS GLY ILE ASP PHE LYS GLU SEQRES 11 A 235 ASP GLY ASN ILE LEU GLY HIS LYS LEU GLU TYR ASN TYR SEQRES 12 A 235 ASN SER HIS ASN VAL TYR ILE THR ALA ASP LYS GLN LYS SEQRES 13 A 235 ASN GLY ILE LYS ALA ASN PHE LYS ILE ARG HIS ASN ILE SEQRES 14 A 235 GLU ASP GLY SER VAL GLN LEU ALA ASP HIS TYR GLN GLN SEQRES 15 A 235 ASN THR PRO ILE GLY ASP GLY PRO VAL LEU LEU PRO ASP SEQRES 16 A 235 ASN HIS TYR LEU SER THR GLN SER LYS LEU SER LYS ASP SEQRES 17 A 235 PRO ASN GLU LYS ARG ASP HIS MET VAL LEU LEU GLU PHE SEQRES 18 A 235 VAL THR ALA ALA GLY ILE THR HIS GLY MET ASP GLU LEU SEQRES 19 A 235 TYR MODRES 6IR7 CRO A 66 SER CHROMOPHORE MODRES 6IR7 CRO A 66 TYR CHROMOPHORE MODRES 6IR7 CRO A 66 GLY CHROMOPHORE HET CRO A 66 21 HET LDO A 301 10 HET SO4 A 302 5 HET MES A 303 12 HETNAM CRO {2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(4- HETNAM 2 CRO HYDROXYBENZYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1- HETNAM 3 CRO YL}ACETIC ACID HETNAM LDO 6-HYDROXY-L-NORLEUCINE HETNAM SO4 SULFATE ION HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID HETSYN CRO PEPTIDE DERIVED CHROMOPHORE FORMUL 1 CRO C15 H17 N3 O5 FORMUL 2 LDO C6 H13 N O3 FORMUL 3 SO4 O4 S 2- FORMUL 4 MES C6 H13 N O4 S FORMUL 5 HOH *368(H2 O) HELIX 1 AA1 GLY A 4 THR A 9 5 6 HELIX 2 AA2 PRO A 56 VAL A 61 5 6 HELIX 3 AA3 VAL A 68 SER A 72 5 5 HELIX 4 AA4 PRO A 75 HIS A 81 5 7 HELIX 5 AA5 ASP A 82 ALA A 87 1 6 HELIX 6 AA6 LYS A 156 ASN A 159 5 4 HELIX 7 AA7 THR A 230 LEU A 236 1 7 SHEET 1 AA112 VAL A 12 VAL A 22 0 SHEET 2 AA112 HIS A 25 ASP A 36 -1 O PHE A 27 N GLY A 20 SHEET 3 AA112 LYS A 41 CYS A 48 -1 O ILE A 47 N SER A 30 SHEET 4 AA112 HIS A 217 ALA A 227 -1 O LEU A 220 N LEU A 44 SHEET 5 AA112 HIS A 199 SER A 208 -1 N SER A 202 O THR A 225 SHEET 6 AA112 HIS A 148 ASP A 155 -1 N HIS A 148 O THR A 203 SHEET 7 AA112 GLY A 160 ASN A 170 -1 O GLY A 160 N ASP A 155 SHEET 8 AA112 VAL A 176 PRO A 187 -1 O HIS A 181 N PHE A 165 SHEET 9 AA112 TYR A 92 PHE A 100 -1 N VAL A 93 O THR A 186 SHEET 10 AA112 ASN A 105 GLU A 115 -1 O VAL A 112 N TYR A 92 SHEET 11 AA112 THR A 118 ILE A 128 -1 O VAL A 120 N LYS A 113 SHEET 12 AA112 VAL A 12 VAL A 22 1 N GLU A 17 O ILE A 123 LINK C PHE A 64 N1 CRO A 66 1555 1555 1.35 LINK C3 CRO A 66 N VAL A 68 1555 1555 1.31 LINK C TYR A 237 N LDO A 301 1555 1555 1.33 CISPEP 1 MET A 88 PRO A 89 0 5.65 SITE 1 AC1 5 ASP A 234 GLU A 235 LEU A 236 TYR A 237 SITE 2 AC1 5 HOH A 591 SITE 1 AC2 11 VAL A 55 PRO A 56 TRP A 57 PRO A 58 SITE 2 AC2 11 HIS A 139 HOH A 416 HOH A 444 HOH A 486 SITE 3 AC2 11 HOH A 492 HOH A 550 HOH A 577 SITE 1 AC3 4 TYR A 151 PHE A 165 LYS A 166 HOH A 447 CRYST1 47.295 51.152 48.506 90.00 100.79 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021144 0.000000 0.004029 0.00000 SCALE2 0.000000 0.019550 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020987 0.00000