HEADER TRANSCRIPTION/DNA 12-NOV-18 6IR8 TITLE RICE WRKY/DNA COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: OSWRKY45; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: DNA (5'-D(P*GP*AP*TP*AP*TP*TP*TP*GP*AP*CP*CP*GP*GP*A)-3'); COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: DNA (5'-D(P*TP*CP*CP*GP*GP*TP*CP*AP*AP*AP*TP*AP*TP*C)-3'); COMPND 11 CHAIN: C; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ORYZA SATIVA JAPONICA GROUP; SOURCE 3 ORGANISM_COMMON: RICE; SOURCE 4 ORGANISM_TAXID: 39947; SOURCE 5 GENE: OSJ_18062; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 11 ORGANISM_TAXID: 32630; SOURCE 12 MOL_ID: 3; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 15 ORGANISM_TAXID: 32630 KEYWDS TRANSCRIPTION FACTOR COMPLEX ZINC FINGER DIMER, TRANSCRIPTION, KEYWDS 2 TRANSCRIPTION-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.LIU,X.CHENG,D.WANG REVDAT 4 22-NOV-23 6IR8 1 REMARK REVDAT 3 10-JUL-19 6IR8 1 JRNL REVDAT 2 06-MAR-19 6IR8 1 JRNL REVDAT 1 20-FEB-19 6IR8 0 JRNL AUTH X.CHENG,Y.ZHAO,Q.JIANG,J.YANG,W.ZHAO,I.A.TAYLOR,Y.L.PENG, JRNL AUTH 2 D.WANG,J.LIU JRNL TITL STRUCTURAL BASIS OF DIMERIZATION AND DUAL W-BOX DNA JRNL TITL 2 RECOGNITION BY RICE WRKY DOMAIN. JRNL REF NUCLEIC ACIDS RES. V. 47 4308 2019 JRNL REFN ESSN 1362-4962 JRNL PMID 30783673 JRNL DOI 10.1093/NAR/GKZ113 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.92 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 9748 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.320 REMARK 3 FREE R VALUE TEST SET COUNT : 519 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.9237 - 3.6507 1.00 2405 128 0.1758 0.2219 REMARK 3 2 3.6507 - 2.8978 1.00 2309 118 0.1834 0.2511 REMARK 3 3 2.8978 - 2.5316 1.00 2237 151 0.2225 0.2423 REMARK 3 4 2.5316 - 2.3001 1.00 2278 122 0.2329 0.3023 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.710 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 1225 REMARK 3 ANGLE : 0.944 1771 REMARK 3 CHIRALITY : 0.050 191 REMARK 3 PLANARITY : 0.005 132 REMARK 3 DIHEDRAL : 25.372 628 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 110 THROUGH 143 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.0947 11.2354 -3.6926 REMARK 3 T TENSOR REMARK 3 T11: 0.0618 T22: 0.1423 REMARK 3 T33: 0.1484 T12: 0.0010 REMARK 3 T13: 0.0109 T23: -0.0000 REMARK 3 L TENSOR REMARK 3 L11: 2.6548 L22: 4.3922 REMARK 3 L33: 4.4271 L12: -0.1087 REMARK 3 L13: -0.1281 L23: -0.3764 REMARK 3 S TENSOR REMARK 3 S11: 0.1044 S12: -0.0525 S13: 0.0557 REMARK 3 S21: 0.1465 S22: 0.0128 S23: 0.0873 REMARK 3 S31: -0.2093 S32: -0.1705 S33: -0.0601 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 144 THROUGH 153 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.5740 3.6972 -24.7629 REMARK 3 T TENSOR REMARK 3 T11: 0.2300 T22: 0.2515 REMARK 3 T33: 0.1676 T12: -0.0123 REMARK 3 T13: 0.0058 T23: 0.0297 REMARK 3 L TENSOR REMARK 3 L11: 0.4773 L22: 1.2572 REMARK 3 L33: 5.8661 L12: 0.7694 REMARK 3 L13: 1.6779 L23: 2.6897 REMARK 3 S TENSOR REMARK 3 S11: 0.1894 S12: -0.0458 S13: -0.0744 REMARK 3 S21: 0.0389 S22: -0.1104 S23: -0.0615 REMARK 3 S31: 0.5774 S32: 0.1350 S33: 0.0817 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 154 THROUGH 178 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.0352 6.8836 -47.4922 REMARK 3 T TENSOR REMARK 3 T11: 0.1005 T22: 0.1443 REMARK 3 T33: 0.1759 T12: 0.0148 REMARK 3 T13: 0.0034 T23: -0.0070 REMARK 3 L TENSOR REMARK 3 L11: 2.8832 L22: 5.8489 REMARK 3 L33: 5.2661 L12: -0.2499 REMARK 3 L13: 0.5147 L23: -2.1184 REMARK 3 S TENSOR REMARK 3 S11: 0.1156 S12: 0.2485 S13: 0.0841 REMARK 3 S21: -0.3271 S22: -0.2478 S23: -0.2360 REMARK 3 S31: 0.2985 S32: 0.6422 S33: 0.2988 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 14 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.0498 20.2570 -15.6352 REMARK 3 T TENSOR REMARK 3 T11: 0.2291 T22: 0.3517 REMARK 3 T33: 0.2954 T12: -0.0232 REMARK 3 T13: 0.0230 T23: -0.0853 REMARK 3 L TENSOR REMARK 3 L11: 5.9534 L22: 5.2075 REMARK 3 L33: 3.6604 L12: -0.6687 REMARK 3 L13: -1.6539 L23: 0.2672 REMARK 3 S TENSOR REMARK 3 S11: 0.1432 S12: 1.3705 S13: -0.0728 REMARK 3 S21: -0.4308 S22: -0.1108 S23: -0.5152 REMARK 3 S31: -0.1668 S32: -0.2513 S33: -0.0837 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 14 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.7174 21.9563 -13.2372 REMARK 3 T TENSOR REMARK 3 T11: 0.1905 T22: 0.2933 REMARK 3 T33: 0.3030 T12: -0.0030 REMARK 3 T13: 0.0067 T23: 0.0956 REMARK 3 L TENSOR REMARK 3 L11: 6.2869 L22: 4.4031 REMARK 3 L33: 5.1952 L12: 0.0070 REMARK 3 L13: -1.0012 L23: 0.3528 REMARK 3 S TENSOR REMARK 3 S11: -0.2139 S12: 1.0150 S13: 0.5288 REMARK 3 S21: -0.2627 S22: 0.1112 S23: -0.3430 REMARK 3 S31: -0.3144 S32: 0.1887 S33: 0.1198 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6IR8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-DEC-18. REMARK 100 THE DEPOSITION ID IS D_1300009767. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-APR-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9778 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9748 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 49.850 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.10 REMARK 200 R MERGE (I) : 0.15100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 24.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.53100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1AUT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.27 M CALCIUM ACETATE HYDRATE, 21% REMARK 280 (W/V) PEG 3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 278K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 49.84550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 49.84550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 24.11250 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.91550 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 24.11250 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.91550 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 49.84550 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 24.11250 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 43.91550 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 49.84550 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 24.11250 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 43.91550 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2580 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -45.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 320 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 361 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 365 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 113 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DG C 4 O3' DG C 4 C3' -0.038 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG B 1 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 DT B 7 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DG C 4 O4' - C1' - N9 ANGL. DEV. = 2.4 DEGREES REMARK 500 DC C 14 O4' - C1' - N1 ANGL. DEV. = 2.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 143 SG REMARK 620 2 CYS A 151 SG 93.4 REMARK 620 3 HIS A 175 ND1 96.9 3.5 REMARK 620 4 CYS A 177 SG 104.5 11.4 7.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 201 DBREF 6IR8 A 110 178 UNP B9FNW2 B9FNW2_ORYSJ 128 196 DBREF 6IR8 B 1 14 PDB 6IR8 6IR8 1 14 DBREF 6IR8 C 1 14 PDB 6IR8 6IR8 1 14 SEQRES 1 A 69 ASN SER VAL VAL VAL LYS ASN LEU ASP ASP GLY GLN ALA SEQRES 2 A 69 TRP ARG LYS TYR GLY GLN LYS GLU ILE GLN ASN SER LYS SEQRES 3 A 69 HIS PRO LYS ALA TYR PHE ARG CYS THR HIS LYS TYR ASP SEQRES 4 A 69 GLN LEU CYS THR ALA GLN ARG GLN VAL GLN ARG CYS ASP SEQRES 5 A 69 ASP ASP PRO ALA SER TYR ARG VAL THR TYR ILE GLY GLU SEQRES 6 A 69 HIS THR CYS ARG SEQRES 1 B 14 DG DA DT DA DT DT DT DG DA DC DC DG DG SEQRES 2 B 14 DA SEQRES 1 C 14 DT DC DC DG DG DT DC DA DA DA DT DA DT SEQRES 2 C 14 DC HET ZN A 201 1 HETNAM ZN ZINC ION FORMUL 4 ZN ZN 2+ FORMUL 5 HOH *111(H2 O) SHEET 1 AA1 2 TRP A 123 LYS A 129 0 SHEET 2 AA1 2 LYS A 138 CYS A 143 -1 O LYS A 138 N LYS A 129 SHEET 1 AA2 2 GLN A 154 ARG A 159 0 SHEET 2 AA2 2 TYR A 167 ILE A 172 -1 O ARG A 168 N GLN A 158 LINK SG CYS A 143 ZN ZN A 201 1555 1555 2.26 LINK SG CYS A 151 ZN ZN A 201 1555 3554 2.19 LINK ND1 HIS A 175 ZN ZN A 201 1555 3554 2.07 LINK SG CYS A 177 ZN ZN A 201 1555 3554 2.41 SITE 1 AC1 4 CYS A 143 CYS A 151 HIS A 175 CYS A 177 CRYST1 48.225 87.831 99.691 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020736 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011385 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010031 0.00000