HEADER DNA BINDING PROTEIN 15-NOV-18 6IS4 TITLE CRYSTAL STRUCTURE OF STAPHYLOCOCCUS AUREUS RESPONSE REGULATOR ARLR DNA TITLE 2 BINDING DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: RESPONSE REGULATOR ARLR; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 123-219; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 273036; SOURCE 4 STRAIN: BOVINE RF122 / ET3-1; SOURCE 5 GENE: ARLR, SAB1271C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BACTERIAL SIGNALING, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.WEN,Z.OUYANG REVDAT 3 22-NOV-23 6IS4 1 LINK REVDAT 2 13-MAY-20 6IS4 1 JRNL REVDAT 1 30-OCT-19 6IS4 0 JRNL AUTH Z.OUYANG,F.ZHENG,J.Y.CHEW,Y.PEI,J.ZHOU,K.WEN,M.HAN, JRNL AUTH 2 M.J.LEMIEUX,P.M.HWANG,Y.WEN JRNL TITL DECIPHERING THE ACTIVATION AND RECOGNITION MECHANISMS OF JRNL TITL 2 STAPHYLOCOCCUS AUREUS RESPONSE REGULATOR ARLR. JRNL REF NUCLEIC ACIDS RES. V. 47 11418 2019 JRNL REFN ESSN 1362-4962 JRNL PMID 31598698 JRNL DOI 10.1093/NAR/GKZ891 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.69 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 17959 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1796 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.6968 - 4.3556 1.00 1405 156 0.1940 0.2168 REMARK 3 2 4.3556 - 3.4584 1.00 1296 145 0.1660 0.1833 REMARK 3 3 3.4584 - 3.0216 1.00 1263 140 0.2015 0.2418 REMARK 3 4 3.0216 - 2.7455 1.00 1248 138 0.2296 0.2357 REMARK 3 5 2.7455 - 2.5488 1.00 1244 139 0.2162 0.2624 REMARK 3 6 2.5488 - 2.3986 1.00 1225 136 0.1930 0.2064 REMARK 3 7 2.3986 - 2.2785 1.00 1236 137 0.1852 0.2109 REMARK 3 8 2.2785 - 2.1793 1.00 1213 135 0.1781 0.1994 REMARK 3 9 2.1793 - 2.0954 1.00 1204 133 0.1739 0.1842 REMARK 3 10 2.0954 - 2.0231 1.00 1225 135 0.1825 0.2149 REMARK 3 11 2.0231 - 1.9599 0.99 1194 134 0.1942 0.2299 REMARK 3 12 1.9599 - 1.9039 1.00 1205 134 0.2056 0.2431 REMARK 3 13 1.9039 - 1.8537 0.99 1205 134 0.2493 0.2316 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.210 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.013 850 REMARK 3 ANGLE : 0.921 1153 REMARK 3 CHIRALITY : 0.058 131 REMARK 3 PLANARITY : 0.006 147 REMARK 3 DIHEDRAL : 17.453 510 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -28.7529 -11.1073 -10.4450 REMARK 3 T TENSOR REMARK 3 T11: 0.3227 T22: 0.1887 REMARK 3 T33: 0.2232 T12: 0.0476 REMARK 3 T13: 0.0202 T23: 0.0037 REMARK 3 L TENSOR REMARK 3 L11: 0.8032 L22: 2.2539 REMARK 3 L33: 3.1118 L12: 0.2107 REMARK 3 L13: -1.0651 L23: 0.9053 REMARK 3 S TENSOR REMARK 3 S11: 0.1115 S12: 0.0887 S13: -0.0271 REMARK 3 S21: -0.2535 S22: -0.1082 S23: -0.1448 REMARK 3 S31: 0.3412 S32: 0.2345 S33: 0.0134 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6IS4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-NOV-18. REMARK 100 THE DEPOSITION ID IS D_1300009805. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-MAR-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17990 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 32.670 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 37.70 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.0600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1GXQ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS PH 8.5 AND 2.0M AMMONIUM REMARK 280 SULFATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+1/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.01900 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 102.03800 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 51.01900 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 102.03800 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 51.01900 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 102.03800 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 51.01900 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 102.03800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6890 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 MG MG A 301 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 489 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 115 REMARK 465 GLY A 116 REMARK 465 HIS A 117 REMARK 465 HIS A 118 REMARK 465 HIS A 119 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 163 CD NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ2 LYS A 134 O HOH A 402 1.36 REMARK 500 HH21 ARG A 193 O HOH A 401 1.59 REMARK 500 H ARG A 219 O HOH A 403 1.59 REMARK 500 O HOH A 483 O HOH A 487 2.00 REMARK 500 NH2 ARG A 193 O HOH A 401 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TYR A 157 CE1 TYR A 157 CZ -0.084 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 214 -60.33 -125.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 136 O REMARK 620 2 ALA A 136 O 0.0 REMARK 620 3 HOH A 450 O 97.1 97.1 REMARK 620 4 HOH A 450 O 98.8 98.8 155.1 REMARK 620 5 HOH A 476 O 90.6 90.6 78.8 82.1 REMARK 620 6 HOH A 476 O 169.2 169.2 82.1 78.8 78.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LYS A 138 O REMARK 620 2 HOH A 449 O 85.2 REMARK 620 3 HOH A 450 O 90.6 173.0 REMARK 620 4 HOH A 476 O 95.9 91.2 83.7 REMARK 620 5 HOH A 485 O 177.4 92.4 91.7 83.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 303 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 420 O REMARK 620 2 HOH A 427 O 90.0 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 303 DBREF 6IS4 A 123 219 UNP Q2YY03 ARLR_STAAB 123 219 SEQADV 6IS4 MET A 115 UNP Q2YY03 INITIATING METHIONINE SEQADV 6IS4 GLY A 116 UNP Q2YY03 EXPRESSION TAG SEQADV 6IS4 HIS A 117 UNP Q2YY03 EXPRESSION TAG SEQADV 6IS4 HIS A 118 UNP Q2YY03 EXPRESSION TAG SEQADV 6IS4 HIS A 119 UNP Q2YY03 EXPRESSION TAG SEQADV 6IS4 HIS A 120 UNP Q2YY03 EXPRESSION TAG SEQADV 6IS4 HIS A 121 UNP Q2YY03 EXPRESSION TAG SEQADV 6IS4 HIS A 122 UNP Q2YY03 EXPRESSION TAG SEQRES 1 A 105 MET GLY HIS HIS HIS HIS HIS HIS ASP ILE ILE ASP VAL SEQRES 2 A 105 ASN GLY ILE THR ILE ASP LYS ASN ALA PHE LYS VAL THR SEQRES 3 A 105 VAL ASN GLY ALA GLU ILE GLU LEU THR LYS THR GLU TYR SEQRES 4 A 105 ASP LEU LEU TYR LEU LEU ALA GLU ASN LYS ASN HIS VAL SEQRES 5 A 105 MET GLN ARG GLU GLN ILE LEU ASN HIS VAL TRP GLY TYR SEQRES 6 A 105 ASN SER GLU VAL GLU THR ASN VAL VAL ASP VAL TYR ILE SEQRES 7 A 105 ARG TYR LEU ARG ASN LYS LEU LYS PRO TYR ASP ARG ASP SEQRES 8 A 105 LYS MET ILE GLU THR VAL ARG GLY VAL GLY TYR VAL ILE SEQRES 9 A 105 ARG HET MG A 301 1 HET MG A 302 1 HET NA A 303 1 HETNAM MG MAGNESIUM ION HETNAM NA SODIUM ION FORMUL 2 MG 2(MG 2+) FORMUL 4 NA NA 1+ FORMUL 5 HOH *92(H2 O) HELIX 1 AA1 THR A 149 ASN A 162 1 14 HELIX 2 AA2 ARG A 169 GLY A 178 1 10 HELIX 3 AA3 ASN A 186 LYS A 200 1 15 HELIX 4 AA4 PRO A 201 ASP A 203 5 3 HELIX 5 AA5 ARG A 204 LYS A 206 5 3 SHEET 1 AA1 2 ILE A 124 VAL A 127 0 SHEET 2 AA1 2 ILE A 130 ASP A 133 -1 O ILE A 132 N ILE A 125 SHEET 1 AA2 2 LYS A 138 VAL A 141 0 SHEET 2 AA2 2 ALA A 144 GLU A 147 -1 O ALA A 144 N VAL A 141 SHEET 1 AA3 3 MET A 167 GLN A 168 0 SHEET 2 AA3 3 GLY A 215 ILE A 218 -1 O TYR A 216 N MET A 167 SHEET 3 AA3 3 ILE A 208 VAL A 211 -1 N VAL A 211 O GLY A 215 LINK O ALA A 136 MG MG A 301 1555 1555 2.29 LINK O ALA A 136 MG MG A 301 1555 4455 2.29 LINK O LYS A 138 MG MG A 302 1555 1555 2.22 LINK MG MG A 301 O HOH A 450 1555 1555 2.57 LINK MG MG A 301 O HOH A 450 1555 4455 2.57 LINK MG MG A 301 O HOH A 476 1555 1555 2.45 LINK MG MG A 301 O HOH A 476 1555 4455 2.45 LINK MG MG A 302 O HOH A 449 1555 1555 2.31 LINK MG MG A 302 O HOH A 450 1555 1555 2.43 LINK MG MG A 302 O HOH A 476 1555 1555 2.35 LINK MG MG A 302 O HOH A 485 1555 4455 2.42 LINK NA NA A 303 O HOH A 420 1555 1555 3.05 LINK NA NA A 303 O HOH A 427 1555 1555 3.14 SITE 1 AC1 3 ALA A 136 HOH A 450 HOH A 476 SITE 1 AC2 5 LYS A 138 HOH A 449 HOH A 450 HOH A 476 SITE 2 AC2 5 HOH A 485 SITE 1 AC3 3 GLU A 147 LYS A 198 HOH A 420 CRYST1 66.928 66.928 153.057 90.00 90.00 120.00 P 64 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014941 0.008626 0.000000 0.00000 SCALE2 0.000000 0.017253 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006534 0.00000