HEADER TRANSFERASE 16-NOV-18 6ISE TITLE CRYSTAL STRUCTURE OF AMPPNP BOUND CK2 ALPHA FROM C. NEOFORMANS COMPND MOL_ID: 1; COMPND 2 MOLECULE: CASEIN KINASE II SUBUNIT ALPHA; COMPND 3 CHAIN: B, A; COMPND 4 SYNONYM: CK2 ALPHA; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CRYPTOCOCCUS NEOFORMANS VAR. GRUBII BT85; SOURCE 3 ORGANISM_TAXID: 1230076; SOURCE 4 GENE: C365_06417; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS KINASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR H.S.CHO REVDAT 2 22-NOV-23 6ISE 1 REMARK REVDAT 1 20-NOV-19 6ISE 0 JRNL AUTH H.S.CHO JRNL TITL CRYSTAL STRUCTURE OF AMPPNP BOUND CK2 ALPHA FROM C. JRNL TITL 2 NEOFORMANS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH K.NIEFIND,C.W.YDE,I.ERMAKOVA,O.G.ISSINGER REMARK 1 TITL EVOLVED TO BE ACTIVE: SULFATE IONS DEFINE SUBSTRATE REMARK 1 TITL 2 RECOGNITION SITES OF CK2ALPHA AND EMPHASISE ITS EXCEPTIONAL REMARK 1 TITL 3 ROLE WITHIN THE CMGC FAMILY OF EUKARYOTIC PROTEIN KINASES. REMARK 1 REF J.MOL.BIOL. V. 370 427 2007 REMARK 1 REFN ISSN 0022-2836 REMARK 1 PMID 17524418 REMARK 1 DOI 10.1016/J.JMB.2007.04.068 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.84 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 18151 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 928 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.88 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1196 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 87.05 REMARK 3 BIN R VALUE (WORKING SET) : 0.2270 REMARK 3 BIN FREE R VALUE SET COUNT : 61 REMARK 3 BIN FREE R VALUE : 0.2820 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5450 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 86 REMARK 3 SOLVENT ATOMS : 8 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.95 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.01000 REMARK 3 B22 (A**2) : -0.03000 REMARK 3 B33 (A**2) : 0.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.02000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.364 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.287 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 14.460 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.927 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.903 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5677 ; 0.011 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 5175 ; 0.002 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7690 ; 1.556 ; 1.650 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11983 ; 1.572 ; 1.584 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 652 ; 7.263 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 336 ;31.186 ;21.607 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 988 ;17.608 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 44 ;19.747 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 690 ; 0.077 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6254 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1292 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2614 ; 2.651 ; 3.919 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2613 ; 2.648 ; 3.918 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3264 ; 4.402 ; 5.875 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3265 ; 4.401 ; 5.877 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3062 ; 3.253 ; 4.344 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 3063 ; 3.252 ; 4.343 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 4427 ; 5.273 ; 6.371 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 23549 ; 9.311 ;73.807 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 23550 ; 9.310 ;73.806 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6ISE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-NOV-18. REMARK 100 THE DEPOSITION ID IS D_1300009827. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-APR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 11C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18151 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.85 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.16100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: 1LP4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M LITHIUM SULFATE, 0.1 M TRIS PH REMARK 280 8.5, 30 %(W/V) PEG 4000, 30%(W/V) DEXTRAN SULFATE SODIUM SALT, 2 REMARK 280 MM MGCL2, 5 MM AMPPNP, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 44.93850 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.79700 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 44.93850 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 47.79700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15610 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 GLY B 3 REMARK 465 GLY B 4 REMARK 465 GLN B 332 REMARK 465 ALA B 333 REMARK 465 SER B 334 REMARK 465 ALA B 335 REMARK 465 SER B 336 REMARK 465 GLN B 337 REMARK 465 PRO B 338 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 GLY A 3 REMARK 465 GLY A 4 REMARK 465 GLN A 332 REMARK 465 ALA A 333 REMARK 465 SER A 334 REMARK 465 ALA A 335 REMARK 465 SER A 336 REMARK 465 GLN A 337 REMARK 465 PRO A 338 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER B 50 O2B ANP B 403 2.01 REMARK 500 N ARG B 5 OE1 GLU B 207 2.14 REMARK 500 NH1 ARG B 9 O ARG B 311 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O LYS B 48 NZ LYS B 70 2555 1.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN B 27 39.02 -95.65 REMARK 500 VAL B 41 -74.82 -112.42 REMARK 500 GLN B 104 -62.03 -94.63 REMARK 500 ASP B 155 58.62 -146.81 REMARK 500 ASP B 174 73.35 44.36 REMARK 500 ALA B 192 -173.48 74.76 REMARK 500 ASP B 209 -159.31 -148.82 REMARK 500 SER A 6 132.33 -175.90 REMARK 500 VAL A 41 -70.45 -119.91 REMARK 500 ASP A 174 71.77 44.36 REMARK 500 ASP A 209 -154.80 -149.96 REMARK 500 ALA A 329 -8.99 -52.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY B 19 ARG B 20 149.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ANP B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ANP A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 404 DBREF1 6ISE B 1 338 UNP A0A226BA59_CRYNV DBREF2 6ISE B A0A226BA59 1 338 DBREF1 6ISE A 1 338 UNP A0A226BA59_CRYNV DBREF2 6ISE A A0A226BA59 1 338 SEQRES 1 B 338 MET SER GLY GLY ARG SER VAL ALA ARG VAL TYR ALA ASN SEQRES 2 B 338 VAL ASN GLU LYS LEU GLY ARG SER TRP TRP ASP TYR ASP SEQRES 3 B 338 ASN LEU VAL VAL GLN TRP GLY VAL GLN ASP ASN TYR GLU SEQRES 4 B 338 ILE VAL ARG LYS VAL GLY ARG GLY LYS TYR SER GLU VAL SEQRES 5 B 338 PHE GLU SER ILE HIS LEU PRO THR ASP SER LYS CYS ILE SEQRES 6 B 338 VAL LYS VAL LEU LYS PRO VAL LYS LYS LYS LYS ILE LYS SEQRES 7 B 338 ARG GLU ILE LYS ILE LEU GLN ASN LEU ALA GLY GLY PRO SEQRES 8 B 338 ASN VAL VAL GLY LEU LEU ASP VAL VAL ARG ASP SER GLN SEQRES 9 B 338 SER LYS THR PRO SER ILE VAL THR GLU TYR VAL ASN ASN SEQRES 10 B 338 THR GLU PHE LYS THR LEU TYR PRO LYS PHE SER ASP PHE SEQRES 11 B 338 ASP VAL ARG TYR TYR ILE PHE GLU LEU LEU LYS ALA LEU SEQRES 12 B 338 ASP PHE CYS HIS SER LYS GLY ILE MET HIS ARG ASP VAL SEQRES 13 B 338 LYS PRO HIS ASN VAL MET ILE ASP HIS GLU LYS ARG THR SEQRES 14 B 338 LEU ARG LEU ILE ASP TRP GLY LEU ALA GLU PHE TYR HIS SEQRES 15 B 338 PRO GLY THR GLU TYR ASN VAL ARG VAL ALA SER ARG TYR SEQRES 16 B 338 PHE LYS GLY PRO GLU LEU LEU VAL ASP PHE GLN GLU TYR SEQRES 17 B 338 ASP TYR SER LEU ASP MET TRP SER LEU GLY CYS MET PHE SEQRES 18 B 338 ALA SER MET ILE PHE ARG LYS GLU PRO PHE PHE HIS GLY SEQRES 19 B 338 HIS ASP ASN ALA ASP GLN LEU VAL LYS ILE ALA LYS VAL SEQRES 20 B 338 LEU GLY THR ASP GLU LEU TYR THR TYR LEU GLU ARG TYR SEQRES 21 B 338 ASP ILE ASP LEU ASP ALA GLN PHE ASP ASP ILE LEU GLY SEQRES 22 B 338 ARG TYR PRO ARG LYS PRO TRP SER ARG PHE VAL SER SER SEQRES 23 B 338 GLU ASN GLN ARG TYR ILE SER SER GLU ALA ILE ASP PHE SEQRES 24 B 338 LEU ASP LYS LEU LEU ARG TYR ASP HIS GLN GLU ARG LEU SEQRES 25 B 338 THR ALA GLU GLU ALA LYS GLU HIS PRO TYR PHE GLU PRO SEQRES 26 B 338 VAL ARG GLN ALA ALA ALA GLN ALA SER ALA SER GLN PRO SEQRES 1 A 338 MET SER GLY GLY ARG SER VAL ALA ARG VAL TYR ALA ASN SEQRES 2 A 338 VAL ASN GLU LYS LEU GLY ARG SER TRP TRP ASP TYR ASP SEQRES 3 A 338 ASN LEU VAL VAL GLN TRP GLY VAL GLN ASP ASN TYR GLU SEQRES 4 A 338 ILE VAL ARG LYS VAL GLY ARG GLY LYS TYR SER GLU VAL SEQRES 5 A 338 PHE GLU SER ILE HIS LEU PRO THR ASP SER LYS CYS ILE SEQRES 6 A 338 VAL LYS VAL LEU LYS PRO VAL LYS LYS LYS LYS ILE LYS SEQRES 7 A 338 ARG GLU ILE LYS ILE LEU GLN ASN LEU ALA GLY GLY PRO SEQRES 8 A 338 ASN VAL VAL GLY LEU LEU ASP VAL VAL ARG ASP SER GLN SEQRES 9 A 338 SER LYS THR PRO SER ILE VAL THR GLU TYR VAL ASN ASN SEQRES 10 A 338 THR GLU PHE LYS THR LEU TYR PRO LYS PHE SER ASP PHE SEQRES 11 A 338 ASP VAL ARG TYR TYR ILE PHE GLU LEU LEU LYS ALA LEU SEQRES 12 A 338 ASP PHE CYS HIS SER LYS GLY ILE MET HIS ARG ASP VAL SEQRES 13 A 338 LYS PRO HIS ASN VAL MET ILE ASP HIS GLU LYS ARG THR SEQRES 14 A 338 LEU ARG LEU ILE ASP TRP GLY LEU ALA GLU PHE TYR HIS SEQRES 15 A 338 PRO GLY THR GLU TYR ASN VAL ARG VAL ALA SER ARG TYR SEQRES 16 A 338 PHE LYS GLY PRO GLU LEU LEU VAL ASP PHE GLN GLU TYR SEQRES 17 A 338 ASP TYR SER LEU ASP MET TRP SER LEU GLY CYS MET PHE SEQRES 18 A 338 ALA SER MET ILE PHE ARG LYS GLU PRO PHE PHE HIS GLY SEQRES 19 A 338 HIS ASP ASN ALA ASP GLN LEU VAL LYS ILE ALA LYS VAL SEQRES 20 A 338 LEU GLY THR ASP GLU LEU TYR THR TYR LEU GLU ARG TYR SEQRES 21 A 338 ASP ILE ASP LEU ASP ALA GLN PHE ASP ASP ILE LEU GLY SEQRES 22 A 338 ARG TYR PRO ARG LYS PRO TRP SER ARG PHE VAL SER SER SEQRES 23 A 338 GLU ASN GLN ARG TYR ILE SER SER GLU ALA ILE ASP PHE SEQRES 24 A 338 LEU ASP LYS LEU LEU ARG TYR ASP HIS GLN GLU ARG LEU SEQRES 25 A 338 THR ALA GLU GLU ALA LYS GLU HIS PRO TYR PHE GLU PRO SEQRES 26 A 338 VAL ARG GLN ALA ALA ALA GLN ALA SER ALA SER GLN PRO HET SO4 B 401 5 HET SO4 B 402 5 HET ANP B 403 31 HET SO4 A 401 5 HET SO4 A 402 5 HET ANP A 403 31 HET EDO A 404 4 HETNAM SO4 SULFATE ION HETNAM ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 SO4 4(O4 S 2-) FORMUL 5 ANP 2(C10 H17 N6 O12 P3) FORMUL 9 EDO C2 H6 O2 FORMUL 10 HOH *8(H2 O) HELIX 1 AA1 ASN B 13 LEU B 18 1 6 HELIX 2 AA2 GLY B 19 ASP B 24 1 6 HELIX 3 AA3 TYR B 25 LEU B 28 5 4 HELIX 4 AA4 VAL B 34 ASP B 36 5 3 HELIX 5 AA5 LYS B 73 LEU B 87 1 15 HELIX 6 AA6 GLU B 119 TYR B 124 1 6 HELIX 7 AA7 SER B 128 LYS B 149 1 22 HELIX 8 AA8 LYS B 157 HIS B 159 5 3 HELIX 9 AA9 ASP B 174 ALA B 178 5 5 HELIX 10 AB1 SER B 193 LYS B 197 5 5 HELIX 11 AB2 GLY B 198 VAL B 203 1 6 HELIX 12 AB3 TYR B 210 ARG B 227 1 18 HELIX 13 AB4 ASP B 236 GLY B 249 1 14 HELIX 14 AB5 THR B 250 ASP B 261 1 12 HELIX 15 AB6 GLN B 267 LEU B 272 1 6 HELIX 16 AB7 PRO B 279 VAL B 284 5 6 HELIX 17 AB8 ASN B 288 ILE B 292 5 5 HELIX 18 AB9 SER B 293 LYS B 302 1 10 HELIX 19 AC1 THR B 313 GLU B 319 1 7 HELIX 20 AC2 HIS B 320 TYR B 322 5 3 HELIX 21 AC3 PHE B 323 ALA B 331 1 9 HELIX 22 AC4 ASN A 13 LEU A 18 1 6 HELIX 23 AC5 GLY A 19 ASP A 24 1 6 HELIX 24 AC6 TYR A 25 LEU A 28 5 4 HELIX 25 AC7 VAL A 34 ASP A 36 5 3 HELIX 26 AC8 LYS A 73 ALA A 88 1 16 HELIX 27 AC9 GLU A 119 TYR A 124 1 6 HELIX 28 AD1 SER A 128 SER A 148 1 21 HELIX 29 AD2 LYS A 157 HIS A 159 5 3 HELIX 30 AD3 ASP A 174 ALA A 178 5 5 HELIX 31 AD4 SER A 193 LYS A 197 5 5 HELIX 32 AD5 GLY A 198 VAL A 203 1 6 HELIX 33 AD6 SER A 211 ARG A 227 1 17 HELIX 34 AD7 ASP A 236 GLY A 249 1 14 HELIX 35 AD8 THR A 250 ASP A 261 1 12 HELIX 36 AD9 ASP A 265 GLY A 273 1 9 HELIX 37 AE1 PRO A 279 VAL A 284 5 6 HELIX 38 AE2 ASN A 288 ILE A 292 5 5 HELIX 39 AE3 SER A 293 LYS A 302 1 10 HELIX 40 AE4 ASP A 307 ARG A 311 5 5 HELIX 41 AE5 THR A 313 GLU A 319 1 7 HELIX 42 AE6 HIS A 320 TYR A 322 5 3 HELIX 43 AE7 PHE A 323 ALA A 329 1 7 SHEET 1 AA1 5 TYR B 38 ARG B 46 0 SHEET 2 AA1 5 SER B 50 HIS B 57 -1 O GLU B 54 N ARG B 42 SHEET 3 AA1 5 SER B 62 LEU B 69 -1 O CYS B 64 N SER B 55 SHEET 4 AA1 5 PRO B 108 THR B 112 -1 O ILE B 110 N LYS B 67 SHEET 5 AA1 5 LEU B 96 ARG B 101 -1 N ASP B 98 O VAL B 111 SHEET 1 AA2 2 ILE B 151 MET B 152 0 SHEET 2 AA2 2 GLU B 179 PHE B 180 -1 O GLU B 179 N MET B 152 SHEET 1 AA3 2 VAL B 161 ASP B 164 0 SHEET 2 AA3 2 THR B 169 LEU B 172 -1 O ARG B 171 N MET B 162 SHEET 1 AA4 5 TYR A 38 ARG A 46 0 SHEET 2 AA4 5 SER A 50 HIS A 57 -1 O GLU A 54 N ARG A 42 SHEET 3 AA4 5 SER A 62 LEU A 69 -1 O VAL A 66 N PHE A 53 SHEET 4 AA4 5 PRO A 108 THR A 112 -1 O ILE A 110 N LYS A 67 SHEET 5 AA4 5 LEU A 96 ARG A 101 -1 N ASP A 98 O VAL A 111 SHEET 1 AA5 2 ILE A 151 MET A 152 0 SHEET 2 AA5 2 GLU A 179 PHE A 180 -1 O GLU A 179 N MET A 152 SHEET 1 AA6 2 VAL A 161 ASP A 164 0 SHEET 2 AA6 2 THR A 169 LEU A 172 -1 O ARG A 171 N MET A 162 CISPEP 1 GLU B 229 PRO B 230 0 -6.63 CISPEP 2 GLU A 229 PRO A 230 0 -14.12 SITE 1 AC1 5 LYS B 76 ARG B 79 ARG B 154 ASN B 188 SITE 2 AC1 5 HOH B 501 SITE 1 AC2 4 ARG B 277 PRO B 279 TRP B 280 SER B 281 SITE 1 AC3 12 GLY B 47 SER B 50 VAL B 52 LYS B 67 SITE 2 AC3 12 GLU B 113 VAL B 115 ASP B 155 LYS B 157 SITE 3 AC3 12 HIS B 159 ASN B 160 ILE B 173 ASP B 174 SITE 1 AC4 4 ARG A 277 PRO A 279 TRP A 280 SER A 281 SITE 1 AC5 5 LYS A 76 ARG A 79 ARG A 154 ASN A 188 SITE 2 AC5 5 HOH A 502 SITE 1 AC6 14 ARG A 46 GLY A 47 SER A 50 VAL A 52 SITE 2 AC6 14 LYS A 67 GLU A 113 VAL A 115 ASP A 155 SITE 3 AC6 14 LYS A 157 HIS A 159 ASN A 160 MET A 162 SITE 4 AC6 14 ILE A 173 ASP A 174 SITE 1 AC7 6 VAL A 10 HIS A 147 TYR A 210 SER A 211 SITE 2 AC7 6 THR A 313 ALA A 314 CRYST1 89.877 95.594 93.300 90.00 90.04 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011126 0.000000 0.000007 0.00000 SCALE2 0.000000 0.010461 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010718 0.00000