HEADER PROTEIN TRANSPORT 21-NOV-18 6ITC TITLE STRUCTURE OF A SUBSTRATE ENGAGED SECA-SECY PROTEIN TRANSLOCATION TITLE 2 MACHINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN TRANSLOCASE SUBUNIT SECA; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: PROTEIN TRANSLOCASE SUBUNIT SECY; COMPND 7 CHAIN: Y; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: PROTEIN TRANSLOCASE SUBUNIT SECE; COMPND 12 CHAIN: E; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 4; COMPND 15 MOLECULE: NANOBODY; COMPND 16 CHAIN: V; COMPND 17 ENGINEERED: YES; COMPND 18 MOL_ID: 5; COMPND 19 MOLECULE: TRANSLOCATING PEPTIDE; COMPND 20 CHAIN: B; COMPND 21 ENGINEERED: YES; COMPND 22 MOL_ID: 6; COMPND 23 MOLECULE: GREEN FLUORESCENT PROTEIN; COMPND 24 CHAIN: G; COMPND 25 ENGINEERED: YES; COMPND 26 MUTATION: YES; COMPND 27 MOL_ID: 7; COMPND 28 MOLECULE: NANOBODY; COMPND 29 CHAIN: C; COMPND 30 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS (STRAIN 168); SOURCE 3 ORGANISM_TAXID: 224308; SOURCE 4 STRAIN: 168; SOURCE 5 GENE: SECA, DIV+, BSU35300; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI #1/H766; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 1354003; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: #1/H766; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: GEOBACILLUS THERMODENITRIFICANS (STRAIN NG80- SOURCE 11 2); SOURCE 12 ORGANISM_TAXID: 420246; SOURCE 13 STRAIN: NG80-2; SOURCE 14 GENE: SECY, GTNG_0125; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI K-12; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 83333; SOURCE 17 EXPRESSION_SYSTEM_STRAIN: K-12; SOURCE 18 MOL_ID: 3; SOURCE 19 ORGANISM_SCIENTIFIC: GEOBACILLUS THERMODENITRIFICANS (STRAIN NG80- SOURCE 20 2); SOURCE 21 ORGANISM_TAXID: 420246; SOURCE 22 STRAIN: NG80-2; SOURCE 23 GENE: SECE, GTNG_0091; SOURCE 24 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 25 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 26 MOL_ID: 4; SOURCE 27 ORGANISM_SCIENTIFIC: LAMA GLAMA; SOURCE 28 ORGANISM_TAXID: 9844; SOURCE 29 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 30 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 31 MOL_ID: 5; SOURCE 32 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 33 ORGANISM_TAXID: 562; SOURCE 34 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 35 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 36 MOL_ID: 6; SOURCE 37 ORGANISM_SCIENTIFIC: AEQUOREA VICTORIA; SOURCE 38 ORGANISM_COMMON: JELLYFISH; SOURCE 39 ORGANISM_TAXID: 6100; SOURCE 40 GENE: GFP; SOURCE 41 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 42 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 43 MOL_ID: 7; SOURCE 44 ORGANISM_SCIENTIFIC: LAMA GLAMA; SOURCE 45 ORGANISM_TAXID: 9844; SOURCE 46 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 47 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SECA, SECY, TRANSLOCATION, CRYO-EM, PROTEIN TRANSPORT EXPDTA ELECTRON MICROSCOPY AUTHOR C.Y.MA,X.F.WU,D.J.SUN,E.Y.PARK,T.A.RAPOPORT,N.GAO,L.LONG REVDAT 4 15-NOV-23 6ITC 1 HETSYN LINK ATOM REVDAT 3 06-NOV-19 6ITC 1 CRYST1 SCALE REVDAT 2 10-JUL-19 6ITC 1 JRNL REVDAT 1 12-JUN-19 6ITC 0 JRNL AUTH C.MA,X.WU,D.SUN,E.PARK,M.A.CATIPOVIC,T.A.RAPOPORT,N.GAO,L.LI JRNL TITL STRUCTURE OF THE SUBSTRATE-ENGAGED SECA-SECY PROTEIN JRNL TITL 2 TRANSLOCATION MACHINE. JRNL REF NAT COMMUN V. 10 2872 2019 JRNL REFN ESSN 2041-1723 JRNL PMID 31253804 JRNL DOI 10.1038/S41467-019-10918-2 REMARK 2 REMARK 2 RESOLUTION. 3.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : FLEXIBLE FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.450 REMARK 3 NUMBER OF PARTICLES : 130153 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 6ITC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-NOV-18. REMARK 100 THE DEPOSITION ID IS D_1300009813. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : SECA-SECY COMPLEX REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K2 QUANTUM (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : NULL REMARK 245 MAXIMUM DEFOCUS (NM) : NULL REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 500.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEPTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, Y, E, V, B, G, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LEU A 2 REMARK 465 GLY A 3 REMARK 465 ILE A 4 REMARK 465 LEU A 5 REMARK 465 ASN A 6 REMARK 465 LYS A 7 REMARK 465 MET A 8 REMARK 465 PHE A 9 REMARK 465 ASP A 10 REMARK 465 PRO A 11 REMARK 465 THR A 12 REMARK 465 LYS A 13 REMARK 465 GLU A 779 REMARK 465 ILE A 780 REMARK 465 MET Y 1 REMARK 465 PHE Y 203 REMARK 465 GLY Y 210 REMARK 465 GLY Y 211 REMARK 465 MET E 1 REMARK 465 GLU E 60 REMARK 465 GLY E 61 REMARK 465 GLY E 62 REMARK 465 HIS E 63 REMARK 465 HIS E 64 REMARK 465 HIS E 65 REMARK 465 HIS E 66 REMARK 465 HIS E 67 REMARK 465 HIS E 68 REMARK 465 HIS E 69 REMARK 465 HIS E 70 REMARK 465 MET B 1 REMARK 465 GLN B 36 REMARK 465 HIS B 37 REMARK 465 THR B 38 REMARK 465 PHE B 39 REMARK 465 ALA B 40 REMARK 465 GLY B 41 REMARK 465 GLY B 42 REMARK 465 ALA B 43 REMARK 465 ARG B 44 REMARK 465 SER B 45 REMARK 465 ILE B 46 REMARK 465 SER B 47 REMARK 465 GLY B 48 REMARK 465 ASP B 49 REMARK 465 GLY B 50 REMARK 465 MET G 1 REMARK 465 SER G 2 REMARK 465 THR G 230 REMARK 465 HIS G 231 REMARK 465 GLY G 232 REMARK 465 MET G 233 REMARK 465 ASP G 234 REMARK 465 GLU G 235 REMARK 465 LEU G 236 REMARK 465 TYR G 237 REMARK 465 LYS G 238 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS V 86 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASN A 662 O ASP A 667 1.79 REMARK 500 NH1 ARG A 525 F2 BEF A 1002 1.82 REMARK 500 NZ LYS Y 354 OE2 GLU Y 358 1.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLY Y 251 N GLY Y 251 CA -0.099 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 133 CA - CB - CG ANGL. DEV. = 19.0 DEGREES REMARK 500 LEU Y 262 CA - CB - CG ANGL. DEV. = 14.0 DEGREES REMARK 500 LEU E 26 CA - CB - CG ANGL. DEV. = 14.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 33 -166.57 -113.35 REMARK 500 GLU A 53 44.12 -94.57 REMARK 500 LEU A 61 31.65 -95.30 REMARK 500 ALA A 227 -166.42 -110.33 REMARK 500 THR A 243 50.98 -118.88 REMARK 500 LYS A 245 74.70 53.99 REMARK 500 ASP A 280 -168.91 -76.07 REMARK 500 LYS A 302 -70.61 -71.25 REMARK 500 SER A 330 -169.35 -118.31 REMARK 500 GLU A 331 28.48 48.03 REMARK 500 GLU A 365 -8.09 64.30 REMARK 500 LYS A 366 128.22 -176.40 REMARK 500 ALA A 368 -160.25 -114.91 REMARK 500 PRO A 393 -171.49 -65.42 REMARK 500 ASN A 395 1.87 83.98 REMARK 500 ARG A 396 130.62 -172.92 REMARK 500 ARG A 409 -153.15 -86.30 REMARK 500 THR A 410 152.40 -42.20 REMARK 500 LYS A 452 -8.16 77.07 REMARK 500 THR A 484 -160.51 -79.74 REMARK 500 ALA A 487 38.73 -97.43 REMARK 500 LEU A 505 72.65 60.67 REMARK 500 ARG A 528 150.21 -39.11 REMARK 500 GLN A 529 108.25 -49.58 REMARK 500 ARG A 553 1.31 -63.22 REMARK 500 ASP A 559 36.81 -94.95 REMARK 500 ASP A 619 48.92 -93.78 REMARK 500 LEU A 623 52.29 -91.51 REMARK 500 PRO A 649 175.43 -58.01 REMARK 500 GLU A 650 11.39 54.19 REMARK 500 ASP A 667 -162.24 67.69 REMARK 500 ILE A 676 -70.10 -117.24 REMARK 500 PHE A 677 67.41 28.57 REMARK 500 ASN A 747 80.38 53.09 REMARK 500 ALA Y 63 49.23 -89.72 REMARK 500 GLN Y 65 43.52 -90.89 REMARK 500 ASN Y 66 -146.38 -113.82 REMARK 500 PHE Y 67 46.76 76.68 REMARK 500 ASP Y 90 0.19 83.53 REMARK 500 VAL Y 92 75.28 43.03 REMARK 500 LEU Y 135 -39.67 -130.28 REMARK 500 LEU Y 140 -38.44 -133.07 REMARK 500 GLN Y 236 34.60 -96.87 REMARK 500 LEU Y 249 21.09 -73.54 REMARK 500 ARG Y 252 -28.13 74.54 REMARK 500 ASN Y 253 78.81 -162.24 REMARK 500 ASN Y 267 76.18 -119.63 REMARK 500 PRO Y 309 21.95 -72.01 REMARK 500 ASN Y 332 78.95 60.78 REMARK 500 ALA Y 389 -3.36 -142.90 REMARK 500 REMARK 500 THIS ENTRY HAS 76 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS A 245 ALA A 246 -144.11 REMARK 500 GLY V 42 LYS V 43 -133.68 REMARK 500 ARG V 44 ARG V 45 -138.29 REMARK 500 VAL V 101 MET V 102 -112.12 REMARK 500 LEU B 33 GLU B 34 -143.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PGV Y 501 REMARK 610 PGV Y 502 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BEF A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGV Y 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGV Y 502 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-9731 RELATED DB: EMDB REMARK 900 STRUCTURE OF A SUBSTRATE ENGAGED SECA-SECY PROTEIN TRANSLOCATION REMARK 900 MACHINE DBREF 6ITC A 1 780 UNP P28366 SECA_BACSU 1 780 DBREF 6ITC Y 1 430 UNP A4IJK8 A4IJK8_GEOTN 1 430 DBREF 6ITC E 1 60 UNP A4IJH4 A4IJH4_GEOTN 1 60 DBREF 6ITC V 1 116 PDB 6ITC 6ITC 1 116 DBREF 6ITC B 1 59 PDB 6ITC 6ITC 1 59 DBREF 6ITC G 1 238 UNP P42212 GFP_AEQVI 1 238 DBREF 6ITC C 2 112 PDB 6ITC 6ITC 2 112 SEQADV 6ITC CYS Y 60 UNP A4IJK8 GLY 60 ENGINEERED MUTATION SEQADV 6ITC THR Y 202 UNP A4IJK8 GLN 202 ENGINEERED MUTATION SEQADV 6ITC GLY Y 210 UNP A4IJK8 GLU 204 ENGINEERED MUTATION SEQADV 6ITC GLY Y 211 UNP A4IJK8 ASN 205 ENGINEERED MUTATION SEQADV 6ITC Y UNP A4IJK8 VAL 206 DELETION SEQADV 6ITC Y UNP A4IJK8 GLY 207 DELETION SEQADV 6ITC Y UNP A4IJK8 GLU 208 DELETION SEQADV 6ITC Y UNP A4IJK8 ASP 209 DELETION SEQADV 6ITC Y UNP A4IJK8 LEU 210 DELETION SEQADV 6ITC Y UNP A4IJK8 PHE 211 DELETION SEQADV 6ITC ASN Y 213 UNP A4IJK8 ARG 213 ENGINEERED MUTATION SEQADV 6ITC GLY E 61 UNP A4IJH4 EXPRESSION TAG SEQADV 6ITC GLY E 62 UNP A4IJH4 EXPRESSION TAG SEQADV 6ITC HIS E 63 UNP A4IJH4 EXPRESSION TAG SEQADV 6ITC HIS E 64 UNP A4IJH4 EXPRESSION TAG SEQADV 6ITC HIS E 65 UNP A4IJH4 EXPRESSION TAG SEQADV 6ITC HIS E 66 UNP A4IJH4 EXPRESSION TAG SEQADV 6ITC HIS E 67 UNP A4IJH4 EXPRESSION TAG SEQADV 6ITC HIS E 68 UNP A4IJH4 EXPRESSION TAG SEQADV 6ITC HIS E 69 UNP A4IJH4 EXPRESSION TAG SEQADV 6ITC HIS E 70 UNP A4IJH4 EXPRESSION TAG SEQADV 6ITC GYS G 66 UNP P42212 SER 65 CHROMOPHORE SEQADV 6ITC GYS G 66 UNP P42212 TYR 66 CHROMOPHORE SEQADV 6ITC GYS G 66 UNP P42212 GLY 67 CHROMOPHORE SEQADV 6ITC ARG G 80 UNP P42212 GLN 80 ENGINEERED MUTATION SEQADV 6ITC SER G 99 UNP P42212 PHE 99 ENGINEERED MUTATION SEQADV 6ITC THR G 153 UNP P42212 MET 153 ENGINEERED MUTATION SEQADV 6ITC ALA G 163 UNP P42212 VAL 163 ENGINEERED MUTATION SEQRES 1 A 780 MET LEU GLY ILE LEU ASN LYS MET PHE ASP PRO THR LYS SEQRES 2 A 780 ARG THR LEU ASN ARG TYR GLU LYS ILE ALA ASN ASP ILE SEQRES 3 A 780 ASP ALA ILE ARG GLY ASP TYR GLU ASN LEU SER ASP ASP SEQRES 4 A 780 ALA LEU LYS HIS LYS THR ILE GLU PHE LYS GLU ARG LEU SEQRES 5 A 780 GLU LYS GLY ALA THR THR ASP ASP LEU LEU VAL GLU ALA SEQRES 6 A 780 PHE ALA VAL VAL ARG GLU ALA SER ARG ARG VAL THR GLY SEQRES 7 A 780 MET PHE PRO PHE LYS VAL GLN LEU MET GLY GLY VAL ALA SEQRES 8 A 780 LEU HIS ASP GLY ASN ILE ALA GLU MET LYS THR GLY GLU SEQRES 9 A 780 GLY LYS THR LEU THR SER THR LEU PRO VAL TYR LEU ASN SEQRES 10 A 780 ALA LEU THR GLY LYS GLY VAL HIS VAL VAL THR VAL ASN SEQRES 11 A 780 GLU TYR LEU ALA SER ARG ASP ALA GLU GLN MET GLY LYS SEQRES 12 A 780 ILE PHE GLU PHE LEU GLY LEU THR VAL GLY LEU ASN LEU SEQRES 13 A 780 ASN SER MET SER LYS ASP GLU LYS ARG GLU ALA TYR ALA SEQRES 14 A 780 ALA ASP ILE THR TYR SER THR ASN ASN GLU LEU GLY PHE SEQRES 15 A 780 ASP TYR LEU ARG ASP ASN MET VAL LEU TYR LYS GLU GLN SEQRES 16 A 780 MET VAL GLN ARG PRO LEU HIS PHE ALA VAL ILE ASP GLU SEQRES 17 A 780 VAL ASP SER ILE LEU ILE ASP GLU ALA ARG THR PRO LEU SEQRES 18 A 780 ILE ILE SER GLY GLN ALA ALA LYS SER THR LYS LEU TYR SEQRES 19 A 780 VAL GLN ALA ASN ALA PHE VAL ARG THR LEU LYS ALA GLU SEQRES 20 A 780 LYS ASP TYR THR TYR ASP ILE LYS THR LYS ALA VAL GLN SEQRES 21 A 780 LEU THR GLU GLU GLY MET THR LYS ALA GLU LYS ALA PHE SEQRES 22 A 780 GLY ILE ASP ASN LEU PHE ASP VAL LYS HIS VAL ALA LEU SEQRES 23 A 780 ASN HIS HIS ILE ASN GLN ALA LEU LYS ALA HIS VAL ALA SEQRES 24 A 780 MET GLN LYS ASP VAL ASP TYR VAL VAL GLU ASP GLY GLN SEQRES 25 A 780 VAL VAL ILE VAL ASP SER PHE THR GLY ARG LEU MET LYS SEQRES 26 A 780 GLY ARG ARG TYR SER GLU GLY LEU HIS GLN ALA ILE GLU SEQRES 27 A 780 ALA LYS GLU GLY LEU GLU ILE GLN ASN GLU SER MET THR SEQRES 28 A 780 LEU ALA THR ILE THR PHE GLN ASN TYR PHE ARG MET TYR SEQRES 29 A 780 GLU LYS LEU ALA GLY MET THR GLY THR ALA LYS THR GLU SEQRES 30 A 780 GLU GLU GLU PHE ARG ASN ILE TYR ASN MET GLN VAL VAL SEQRES 31 A 780 THR ILE PRO THR ASN ARG PRO VAL VAL ARG ASP ASP ARG SEQRES 32 A 780 PRO ASP LEU ILE TYR ARG THR MET GLU GLY LYS PHE LYS SEQRES 33 A 780 ALA VAL ALA GLU ASP VAL ALA GLN ARG TYR MET THR GLY SEQRES 34 A 780 GLN PRO VAL LEU VAL GLY THR VAL ALA VAL GLU THR SER SEQRES 35 A 780 GLU LEU ILE SER LYS LEU LEU LYS ASN LYS GLY ILE PRO SEQRES 36 A 780 HIS GLN VAL LEU ASN ALA LYS ASN HIS GLU ARG GLU ALA SEQRES 37 A 780 GLN ILE ILE GLU GLU ALA GLY GLN LYS GLY ALA VAL THR SEQRES 38 A 780 ILE ALA THR ASN MET ALA GLY ARG GLY THR ASP ILE LYS SEQRES 39 A 780 LEU GLY GLU GLY VAL LYS GLU LEU GLY GLY LEU ALA VAL SEQRES 40 A 780 VAL GLY THR GLU ARG HIS GLU SER ARG ARG ILE ASP ASN SEQRES 41 A 780 GLN LEU ARG GLY ARG SER GLY ARG GLN GLY ASP PRO GLY SEQRES 42 A 780 ILE THR GLN PHE TYR LEU SER MET GLU ASP GLU LEU MET SEQRES 43 A 780 ARG ARG PHE GLY ALA GLU ARG THR MET ALA MET LEU ASP SEQRES 44 A 780 ARG PHE GLY MET ASP ASP SER THR PRO ILE GLN SER LYS SEQRES 45 A 780 MET VAL SER ARG ALA VAL GLU SER SER GLN LYS ARG VAL SEQRES 46 A 780 GLU GLY ASN ASN PHE ASP SER ARG LYS GLN LEU LEU GLN SEQRES 47 A 780 TYR ASP ASP VAL LEU ARG GLN GLN ARG GLU VAL ILE TYR SEQRES 48 A 780 LYS GLN ARG PHE GLU VAL ILE ASP SER GLU ASN LEU ARG SEQRES 49 A 780 GLU ILE VAL GLU ASN MET ILE LYS SER SER LEU GLU ARG SEQRES 50 A 780 ALA ILE ALA ALA TYR THR PRO ARG GLU GLU LEU PRO GLU SEQRES 51 A 780 GLU TRP LYS LEU ASP GLY LEU VAL ASP LEU ILE ASN THR SEQRES 52 A 780 THR TYR LEU ASP GLU GLY ALA LEU GLU LYS SER ASP ILE SEQRES 53 A 780 PHE GLY LYS GLU PRO ASP GLU MET LEU GLU LEU ILE MET SEQRES 54 A 780 ASP ARG ILE ILE THR LYS TYR ASN GLU LYS GLU GLU GLN SEQRES 55 A 780 PHE GLY LYS GLU GLN MET ARG GLU PHE GLU LYS VAL ILE SEQRES 56 A 780 VAL LEU ARG ALA VAL ASP SER LYS TRP MET ASP HIS ILE SEQRES 57 A 780 ASP ALA MET ASP GLN LEU ARG GLN GLY ILE HIS LEU ARG SEQRES 58 A 780 ALA TYR ALA GLN THR ASN PRO LEU ARG GLU TYR GLN MET SEQRES 59 A 780 GLU GLY PHE ALA MET PHE GLU HIS MET ILE GLU SER ILE SEQRES 60 A 780 GLU ASP GLU VAL ALA LYS PHE VAL MET LYS ALA GLU ILE SEQRES 1 Y 424 MET PHE ARG THR ILE SER ASN PHE MET ARG VAL SER ASP SEQRES 2 Y 424 ILE ARG ASN LYS ILE ILE PHE THR LEU LEU MET LEU ILE SEQRES 3 Y 424 VAL PHE ARG ILE GLY THR PHE ILE PRO VAL PRO SER VAL SEQRES 4 Y 424 ASN THR ASP VAL LEU LYS LEU GLN ASP GLN LEU ASN ALA SEQRES 5 Y 424 PHE GLY VAL LEU ASN ILE PHE CYS GLY GLY ALA LEU GLN SEQRES 6 Y 424 ASN PHE SER ILE PHE ALA MET GLY VAL MET PRO TYR ILE SEQRES 7 Y 424 THR ALA SER ILE ILE VAL GLN LEU LEU GLN MET ASP VAL SEQRES 8 Y 424 VAL PRO LYS PHE ALA GLU TRP SER LYS GLN GLY GLU MET SEQRES 9 Y 424 GLY ARG ARG LYS LEU ALA GLN PHE THR ARG TYR PHE THR SEQRES 10 Y 424 ILE VAL LEU GLY PHE ILE GLN ALA LEU GLY MET SER TYR SEQRES 11 Y 424 GLY PHE ASN ASN LEU ALA GLY GLY MET LEU ILE GLN ASN SEQRES 12 Y 424 PRO GLY ILE GLY THR TYR LEU LEU ILE ALA VAL VAL LEU SEQRES 13 Y 424 THR ALA GLY THR ALA PHE LEU MET TRP LEU GLY GLU GLN SEQRES 14 Y 424 ILE THR ALA LYS GLY VAL GLY ASN GLY ILE SER ILE ILE SEQRES 15 Y 424 ILE PHE ALA GLY ILE VAL SER GLY ILE PRO THR ILE LEU SEQRES 16 Y 424 ASN GLN ILE TYR ALA GLN THR PHE GLY GLY LEU ASN ILE SEQRES 17 Y 424 VAL ARG LEU LEU LEU VAL ALA LEU ALA VAL VAL ALA VAL SEQRES 18 Y 424 ILE VAL GLY VAL ILE TYR ILE GLN GLN ALA PHE ARG LYS SEQRES 19 Y 424 ILE PRO ILE GLN TYR ALA LYS ARG LEU GLU GLY ARG ASN SEQRES 20 Y 424 PRO VAL GLY GLY HIS SER THR HIS LEU PRO LEU LYS VAL SEQRES 21 Y 424 ASN PRO ALA GLY VAL ILE PRO VAL ILE PHE ALA VAL SER SEQRES 22 Y 424 PHE LEU ILE ALA PRO PRO THR ILE ALA SER PHE PHE GLY SEQRES 23 Y 424 THR ASN ASP VAL THR LEU TRP ILE ARG ARG THR PHE ASP SEQRES 24 Y 424 TYR THR HIS PRO VAL GLY MET THR ILE TYR VAL VAL LEU SEQRES 25 Y 424 ILE ILE ALA PHE THR TYR PHE TYR ALA PHE VAL GLN VAL SEQRES 26 Y 424 ASN PRO GLU GLN MET ALA ASP ASN LEU LYS LYS GLN GLY SEQRES 27 Y 424 GLY TYR ILE PRO GLY ILE ARG PRO GLY LYS ASN THR GLN SEQRES 28 Y 424 GLU TYR VAL THR ARG ILE LEU TYR ARG LEU THR LEU VAL SEQRES 29 Y 424 GLY SER LEU PHE LEU ALA PHE ILE ALA VAL LEU PRO VAL SEQRES 30 Y 424 PHE PHE VAL ASN PHE ALA ASN LEU PRO PRO SER ALA GLN SEQRES 31 Y 424 ILE GLY GLY THR SER LEU LEU ILE VAL VAL GLY VAL ALA SEQRES 32 Y 424 LEU GLU THR MET LYS GLN LEU GLU SER GLN LEU VAL LYS SEQRES 33 Y 424 ARG HIS TYR ARG GLY PHE ILE LYS SEQRES 1 E 70 MET GLN ARG VAL THR ASN PHE PHE LYS GLU VAL VAL ARG SEQRES 2 E 70 GLU LEU LYS LYS VAL SER TRP PRO ASN ARG LYS GLU LEU SEQRES 3 E 70 VAL ASN TYR THR ALA VAL VAL LEU ALA THR VAL ALA PHE SEQRES 4 E 70 PHE THR VAL PHE PHE ALA VAL ILE ASP LEU GLY ILE SER SEQRES 5 E 70 GLN LEU ILE ARG LEU VAL PHE GLU GLY GLY HIS HIS HIS SEQRES 6 E 70 HIS HIS HIS HIS HIS SEQRES 1 V 116 GLN VAL GLN LEU VAL GLU THR GLY GLY GLY LEU VAL GLN SEQRES 2 V 116 PRO GLY GLY SER LEU ARG LEU SER CYS GLY ALA SER GLY SEQRES 3 V 116 SER ILE PHE ASN MET TYR ALA MET GLY TRP TYR ARG GLN SEQRES 4 V 116 ALA PRO GLY LYS ARG ARG GLU VAL VAL ALA ARG ILE ALA SEQRES 5 V 116 THR ASP ASP SER THR MET TYR PRO ASP SER VAL LYS GLY SEQRES 6 V 116 ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN THR VAL SEQRES 7 V 116 TYR LEU GLN MET ASN SER LEU LYS PRO GLU ASP THR ALA SEQRES 8 V 116 VAL TYR TYR CYS TYR TYR GLN ARG THR VAL MET SER GLN SEQRES 9 V 116 PRO TYR TRP GLY GLN GLY THR GLN VAL THR VAL SER SEQRES 1 B 59 MET ALA LYS LYS THR ALA ILE ALA ILE ALA VAL ALA LEU SEQRES 2 B 59 ALA GLY PHE ALA THR VAL ALA SER TYR ALA GLN TYR GLU SEQRES 3 B 59 ASP GLY CYS SER GLY GLU LEU GLU ARG GLN HIS THR PHE SEQRES 4 B 59 ALA GLY GLY ALA ARG SER ILE SER GLY ASP GLY ASP SER SEQRES 5 B 59 PRO HIS SER TYR HIS SER GLY SEQRES 1 G 236 MET SER LYS GLY GLU GLU LEU PHE THR GLY VAL VAL PRO SEQRES 2 G 236 ILE LEU VAL GLU LEU ASP GLY ASP VAL ASN GLY HIS LYS SEQRES 3 G 236 PHE SER VAL SER GLY GLU GLY GLU GLY ASP ALA THR TYR SEQRES 4 G 236 GLY LYS LEU THR LEU LYS PHE ILE CYS THR THR GLY LYS SEQRES 5 G 236 LEU PRO VAL PRO TRP PRO THR LEU VAL THR THR PHE GYS SEQRES 6 G 236 VAL GLN CYS PHE SER ARG TYR PRO ASP HIS MET LYS ARG SEQRES 7 G 236 HIS ASP PHE PHE LYS SER ALA MET PRO GLU GLY TYR VAL SEQRES 8 G 236 GLN GLU ARG THR ILE SER PHE LYS ASP ASP GLY ASN TYR SEQRES 9 G 236 LYS THR ARG ALA GLU VAL LYS PHE GLU GLY ASP THR LEU SEQRES 10 G 236 VAL ASN ARG ILE GLU LEU LYS GLY ILE ASP PHE LYS GLU SEQRES 11 G 236 ASP GLY ASN ILE LEU GLY HIS LYS LEU GLU TYR ASN TYR SEQRES 12 G 236 ASN SER HIS ASN VAL TYR ILE THR ALA ASP LYS GLN LYS SEQRES 13 G 236 ASN GLY ILE LYS ALA ASN PHE LYS ILE ARG HIS ASN ILE SEQRES 14 G 236 GLU ASP GLY SER VAL GLN LEU ALA ASP HIS TYR GLN GLN SEQRES 15 G 236 ASN THR PRO ILE GLY ASP GLY PRO VAL LEU LEU PRO ASP SEQRES 16 G 236 ASN HIS TYR LEU SER THR GLN SER ALA LEU SER LYS ASP SEQRES 17 G 236 PRO ASN GLU LYS ARG ASP HIS MET VAL LEU LEU GLU PHE SEQRES 18 G 236 VAL THR ALA ALA GLY ILE THR HIS GLY MET ASP GLU LEU SEQRES 19 G 236 TYR LYS SEQRES 1 C 112 VAL ALA LEU VAL GLU SER GLY GLY ALA LEU VAL GLN PRO SEQRES 2 C 112 GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY PHE SEQRES 3 C 112 PRO VAL ASN ARG TYR SER MET ARG TRP TYR ARG GLN ALA SEQRES 4 C 112 PRO GLY LYS GLU ARG GLU TRP VAL ALA GLY MET SER ALA SEQRES 5 C 112 GLY ASP ARG SER SER TYR GLU ASP SER VAL LYS GLY ARG SEQRES 6 C 112 PHE THR ILE SER ARG ASP ASP ALA ARG ASN THR VAL TYR SEQRES 7 C 112 LEU GLN MET ASN SER LEU LYS PRO GLU ASP THR ALA VAL SEQRES 8 C 112 TYR TYR CYS ASN VAL ASN VAL GLY PHE GLU TYR TRP GLY SEQRES 9 C 112 GLN GLY THR GLN VAL THR VAL SER MODRES 6ITC GYS G 66 SER CHROMOPHORE MODRES 6ITC GYS G 66 TYR CHROMOPHORE MODRES 6ITC GYS G 66 GLY CHROMOPHORE HET GYS G 66 21 HET MG A1001 1 HET BEF A1002 4 HET ADP A1003 27 HET PGV Y 501 27 HET PGV Y 502 41 HETNAM GYS [(4Z)-2-(1-AMINO-2-HYDROXYETHYL)-4-(4- HETNAM 2 GYS HYDROXYBENZYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1- HETNAM 3 GYS YL]ACETIC ACID HETNAM MG MAGNESIUM ION HETNAM BEF BERYLLIUM TRIFLUORIDE ION HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM PGV (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY) HETNAM 2 PGV PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)- HETNAM 3 PGV OCTADEC-11-ENOATE HETSYN GYS CHROMOPHORE (SER-TYR-GLY) HETSYN PGV PHOSPHATIDYLGLYCEROL; 2-VACCENOYL-1-PALMITOYL-SN- HETSYN 2 PGV GLYCEROL-3-PHOSPHOGLYCEROL FORMUL 6 GYS C14 H15 N3 O5 FORMUL 8 MG MG 2+ FORMUL 9 BEF BE F3 1- FORMUL 10 ADP C10 H15 N5 O10 P2 FORMUL 11 PGV 2(C40 H77 O10 P) HELIX 1 AA1 ARG A 14 ARG A 30 1 17 HELIX 2 AA2 GLY A 31 TYR A 33 5 3 HELIX 3 AA3 ALA A 40 GLU A 53 1 14 HELIX 4 AA4 LEU A 61 GLY A 78 1 18 HELIX 5 AA5 LYS A 83 ASP A 94 1 12 HELIX 6 AA6 LYS A 106 ALA A 118 1 13 HELIX 7 AA7 ASN A 130 PHE A 147 1 18 HELIX 8 AA8 SER A 160 ALA A 169 1 10 HELIX 9 AA9 ASN A 177 ASN A 188 1 12 HELIX 10 AB1 TYR A 192 MET A 196 5 5 HELIX 11 AB2 GLU A 208 LEU A 213 1 6 HELIX 12 AB3 THR A 231 ARG A 242 1 12 HELIX 13 AB4 LYS A 245 ASP A 249 1 5 HELIX 14 AB5 THR A 262 PHE A 273 1 12 HELIX 15 AB6 HIS A 283 ALA A 299 1 17 HELIX 16 AB7 GLN A 301 TYR A 306 1 6 HELIX 17 AB8 LEU A 333 GLU A 341 1 9 HELIX 18 AB9 PHE A 357 ARG A 362 1 6 HELIX 19 AC1 ALA A 374 THR A 376 5 3 HELIX 20 AC2 GLU A 377 ILE A 384 1 8 HELIX 21 AC3 THR A 410 MET A 427 1 18 HELIX 22 AC4 VAL A 439 LEU A 449 1 11 HELIX 23 AC5 ASN A 463 GLU A 465 5 3 HELIX 24 AC6 ARG A 466 ILE A 471 1 6 HELIX 25 AC7 GLU A 472 ALA A 474 5 3 HELIX 26 AC8 THR A 484 GLY A 488 5 5 HELIX 27 AC9 SER A 515 ARG A 525 1 11 HELIX 28 AD1 ASP A 543 GLY A 550 1 8 HELIX 29 AD2 SER A 571 ASP A 619 1 49 HELIX 30 AD3 LEU A 623 THR A 643 1 21 HELIX 31 AD4 LYS A 653 TYR A 665 1 13 HELIX 32 AD5 GLU A 672 ILE A 676 5 5 HELIX 33 AD6 GLU A 680 GLY A 704 1 25 HELIX 34 AD7 LYS A 705 ILE A 738 1 34 HELIX 35 AD8 HIS A 739 TYR A 743 5 5 HELIX 36 AD9 ASN A 747 LYS A 777 1 31 HELIX 37 AE1 THR Y 4 MET Y 9 1 6 HELIX 38 AE2 VAL Y 11 GLY Y 31 1 21 HELIX 39 AE3 ASN Y 40 GLN Y 47 1 8 HELIX 40 AE4 VAL Y 74 GLN Y 88 1 15 HELIX 41 AE5 VAL Y 92 GLY Y 102 1 11 HELIX 42 AE6 GLU Y 103 LEU Y 135 1 33 HELIX 43 AE7 THR Y 148 GLY Y 174 1 27 HELIX 44 AE8 ASN Y 177 VAL Y 188 1 12 HELIX 45 AE9 GLY Y 190 THR Y 202 1 13 HELIX 46 AF1 ILE Y 214 GLN Y 236 1 23 HELIX 47 AF2 VAL Y 271 SER Y 289 1 19 HELIX 48 AF3 ASN Y 294 PHE Y 304 1 11 HELIX 49 AF4 VAL Y 310 VAL Y 331 1 22 HELIX 50 AF5 ASN Y 332 GLN Y 343 1 12 HELIX 51 AF6 LYS Y 354 LEU Y 381 1 28 HELIX 52 AF7 PRO Y 382 ASN Y 390 1 9 HELIX 53 AF8 GLY Y 399 SER Y 418 1 20 HELIX 54 AF9 GLN Y 419 HIS Y 424 1 6 HELIX 55 AG1 ARG E 3 LEU E 15 1 13 HELIX 56 AG2 ASN E 22 PHE E 59 1 38 HELIX 57 AG3 LYS V 86 THR V 90 5 5 HELIX 58 AG4 LYS B 3 ALA B 20 1 18 HELIX 59 AG5 SER B 21 GLN B 24 5 4 HELIX 60 AG6 TRP G 57 THR G 62 1 6 HELIX 61 AG7 PRO C 28 TYR C 32 5 5 HELIX 62 AG8 LYS C 83 THR C 87 5 5 SHEET 1 AA1 2 ILE A 97 GLU A 99 0 SHEET 2 AA1 2 VAL A 389 THR A 391 1 O VAL A 390 N ILE A 97 SHEET 1 AA2 4 GLY A 153 LEU A 154 0 SHEET 2 AA2 4 THR A 173 THR A 176 1 O TYR A 174 N GLY A 153 SHEET 3 AA2 4 HIS A 125 THR A 128 1 N VAL A 126 O THR A 173 SHEET 4 AA2 4 ALA A 204 ILE A 206 1 O VAL A 205 N HIS A 125 SHEET 1 AA3 2 PRO A 220 GLN A 226 0 SHEET 2 AA3 2 SER A 349 THR A 356 -1 O LEU A 352 N ILE A 223 SHEET 1 AA4 2 TYR A 250 ASP A 253 0 SHEET 2 AA4 2 ALA A 258 LEU A 261 -1 O GLN A 260 N THR A 251 SHEET 1 AA5 2 VAL A 307 GLU A 309 0 SHEET 2 AA5 2 GLN A 312 VAL A 314 -1 O GLN A 312 N GLU A 309 SHEET 1 AA6 2 ARG A 327 TYR A 329 0 SHEET 2 AA6 2 HIS B 54 TYR B 56 -1 O SER B 55 N ARG A 328 SHEET 1 AA7 2 LEU A 406 ILE A 407 0 SHEET 2 AA7 2 TYR A 538 LEU A 539 1 O LEU A 539 N LEU A 406 SHEET 1 AA8 3 VAL A 480 ALA A 483 0 SHEET 2 AA8 3 VAL A 432 GLY A 435 1 N VAL A 434 O THR A 481 SHEET 3 AA8 3 ALA A 506 VAL A 508 1 O VAL A 508 N LEU A 433 SHEET 1 AA9 2 PHE Y 238 PRO Y 242 0 SHEET 2 AA9 2 HIS Y 261 LYS Y 265 -1 O LEU Y 264 N ARG Y 239 SHEET 1 AB1 4 LEU V 4 THR V 7 0 SHEET 2 AB1 4 SER V 17 ALA V 24 -1 O GLY V 23 N VAL V 5 SHEET 3 AB1 4 THR V 77 ASN V 83 -1 O MET V 82 N LEU V 18 SHEET 4 AB1 4 THR V 68 ASP V 72 -1 N THR V 68 O GLN V 81 SHEET 1 AB2 3 LEU V 11 VAL V 12 0 SHEET 2 AB2 3 GLY V 110 VAL V 115 1 O THR V 114 N VAL V 12 SHEET 3 AB2 3 ALA V 91 TYR V 94 -1 N ALA V 91 O VAL V 113 SHEET 1 AB3 2 MET V 34 TYR V 37 0 SHEET 2 AB3 2 VAL V 47 ILE V 51 -1 O VAL V 48 N TRP V 36 SHEET 1 AB412 VAL G 12 VAL G 22 0 SHEET 2 AB412 HIS G 25 ASP G 36 -1 O GLY G 33 N ILE G 14 SHEET 3 AB412 LYS G 41 CYS G 48 -1 O THR G 43 N GLU G 34 SHEET 4 AB412 HIS G 217 ALA G 227 -1 O LEU G 220 N LEU G 44 SHEET 5 AB412 HIS G 199 SER G 208 -1 N GLN G 204 O PHE G 223 SHEET 6 AB412 HIS G 148 ASP G 155 -1 N ILE G 152 O HIS G 199 SHEET 7 AB412 GLY G 160 ASN G 170 -1 O GLY G 160 N ASP G 155 SHEET 8 AB412 VAL G 176 PRO G 187 -1 O ALA G 179 N ILE G 167 SHEET 9 AB412 TYR G 92 PHE G 100 -1 N VAL G 93 O THR G 186 SHEET 10 AB412 ASN G 105 GLU G 115 -1 O ALA G 110 N GLN G 94 SHEET 11 AB412 THR G 118 ILE G 128 -1 O VAL G 120 N LYS G 113 SHEET 12 AB412 VAL G 12 VAL G 22 1 N GLU G 17 O ILE G 123 SHEET 1 AB5 4 ALA C 3 SER C 7 0 SHEET 2 AB5 4 ARG C 19 SER C 25 -1 O SER C 21 N SER C 7 SHEET 3 AB5 4 THR C 77 GLN C 81 -1 O VAL C 78 N CYS C 22 SHEET 4 AB5 4 THR C 68 ASP C 72 -1 N SER C 70 O TYR C 79 SHEET 1 AB6 6 LEU C 11 VAL C 12 0 SHEET 2 AB6 6 THR C 107 VAL C 111 1 O THR C 110 N VAL C 12 SHEET 3 AB6 6 ALA C 88 ASN C 95 -1 N TYR C 90 O THR C 107 SHEET 4 AB6 6 MET C 34 GLN C 39 -1 N GLN C 39 O VAL C 89 SHEET 5 AB6 6 TRP C 47 MET C 51 -1 O ALA C 49 N TRP C 36 SHEET 6 AB6 6 SER C 57 TYR C 59 -1 O SER C 58 N GLY C 50 SHEET 1 AB7 4 LEU C 11 VAL C 12 0 SHEET 2 AB7 4 THR C 107 VAL C 111 1 O THR C 110 N VAL C 12 SHEET 3 AB7 4 ALA C 88 ASN C 95 -1 N TYR C 90 O THR C 107 SHEET 4 AB7 4 GLU C 101 TYR C 102 -1 O TYR C 102 N VAL C 94 SSBOND 1 CYS Y 60 CYS B 29 1555 1555 2.06 SSBOND 2 CYS V 22 CYS V 95 1555 1555 2.04 SSBOND 3 CYS C 22 CYS C 92 1555 1555 2.04 LINK NH2 ARG A 528 F1 BEF A1002 1555 1555 1.57 LINK C PHE G 64 N1 GYS G 66 1555 1555 1.43 LINK C3 GYS G 66 N VAL G 68 1555 1555 1.55 LINK O3 GYS G 66 N VAL G 68 1555 1555 1.30 LINK MG MG A1001 O2B ADP A1003 1555 1555 2.52 CISPEP 1 MET G 88 PRO G 89 0 8.51 SITE 1 AC1 2 BEF A1002 ADP A1003 SITE 1 AC2 9 THR A 102 GLY A 103 ARG A 489 GLY A 490 SITE 2 AC2 9 GLN A 521 ARG A 525 ARG A 528 MG A1001 SITE 3 AC2 9 ADP A1003 SITE 1 AC3 12 MET A 79 PHE A 80 PHE A 82 GLN A 85 SITE 2 AC3 12 GLY A 103 GLY A 105 LYS A 106 THR A 107 SITE 3 AC3 12 ASP A 492 ARG A 528 MG A1001 BEF A1002 SITE 1 AC4 1 ARG Y 362 SITE 1 AC5 9 CYS Y 60 ILE Y 187 ILE Y 191 ILE Y 194 SITE 2 AC5 9 ALA Y 221 GLN Y 396 ILE Y 397 SER Y 401 SITE 3 AC5 9 LEU Y 402 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000