HEADER PROTEIN BINDING 26-NOV-18 6ITU TITLE CRYSTAL STRUCTURE OF THE GULP1 PTB DOMAIN-APP PEPTIDE COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: PTB DOMAIN-CONTAINING ENGULFMENT ADAPTER PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CELL DEATH PROTEIN 6 HOMOLOG,PTB DOMAIN ADAPTER PROTEIN CED- COMPND 5 6,PROTEIN GULP; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: AMYLOID BETA A4 PROTEIN; COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GULP1, CED6, GULP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_TAXID: 9606 KEYWDS PTB, APP-BINDING, PHOSPHOPROTEIN, CYTOPLASMIC, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR K.W.Y.YUNG,K.F.LAU,J.C.K.NGO REVDAT 3 22-NOV-23 6ITU 1 REMARK REVDAT 2 20-NOV-19 6ITU 1 JRNL REVDAT 1 14-AUG-19 6ITU 0 JRNL AUTH D.D.CHAU,K.W.YUNG,W.W.CHAN,Y.AN,Y.HAO,H.E.CHAN,J.C.NGO, JRNL AUTH 2 K.F.LAU JRNL TITL ATTENUATION OF AMYLOID-BETA GENERATION BY ATYPICAL PROTEIN JRNL TITL 2 KINASE C-MEDIATED PHOSPHORYLATION OF ENGULFMENT ADAPTOR PTB JRNL TITL 3 DOMAIN CONTAINING 1 THREONINE 35. JRNL REF FASEB J. V. 33 12019 2019 JRNL REFN ESSN 1530-6860 JRNL PMID 31373844 JRNL DOI 10.1096/FJ.201802825RR REMARK 2 REMARK 2 RESOLUTION. 2.17 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0171 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.17 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 3 NUMBER OF REFLECTIONS : 13107 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 688 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.17 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.23 REMARK 3 REFLECTION IN BIN (WORKING SET) : 930 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.01 REMARK 3 BIN R VALUE (WORKING SET) : 0.2110 REMARK 3 BIN FREE R VALUE SET COUNT : 56 REMARK 3 BIN FREE R VALUE : 0.2990 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1284 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 14 REMARK 3 SOLVENT ATOMS : 48 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 56.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.05000 REMARK 3 B22 (A**2) : -0.05000 REMARK 3 B33 (A**2) : 0.16000 REMARK 3 B12 (A**2) : -0.03000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.185 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.158 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.106 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.159 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.946 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1341 ; 0.014 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1246 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1801 ; 1.678 ; 1.962 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2913 ; 0.974 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 160 ; 7.728 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 64 ;34.307 ;24.375 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 252 ;14.556 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;10.518 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 193 ; 0.094 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1459 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 271 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 640 ; 4.114 ; 3.373 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 639 ; 4.105 ; 3.372 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 800 ; 5.623 ; 5.010 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 801 ; 5.625 ; 5.011 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 700 ; 5.492 ; 3.943 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 700 ; 5.490 ; 3.943 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1002 ; 7.657 ; 5.702 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 1428 ;10.039 ;39.641 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 1429 ;10.037 ;39.671 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 15 A 160 REMARK 3 ORIGIN FOR THE GROUP (A): 2.2140 32.8170 34.3420 REMARK 3 T TENSOR REMARK 3 T11: 0.0612 T22: 0.0874 REMARK 3 T33: 0.1087 T12: -0.0063 REMARK 3 T13: -0.0063 T23: 0.0444 REMARK 3 L TENSOR REMARK 3 L11: 0.9554 L22: 5.2404 REMARK 3 L33: 6.8705 L12: -0.6997 REMARK 3 L13: 1.5686 L23: -4.4357 REMARK 3 S TENSOR REMARK 3 S11: 0.0190 S12: -0.1162 S13: -0.2439 REMARK 3 S21: -0.2597 S22: 0.4520 S23: 0.4450 REMARK 3 S31: 0.3775 S32: -0.6244 S33: -0.4711 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 13 REMARK 3 ORIGIN FOR THE GROUP (A): 11.6670 28.4480 43.8620 REMARK 3 T TENSOR REMARK 3 T11: 0.0716 T22: 0.0409 REMARK 3 T33: 0.0174 T12: 0.0272 REMARK 3 T13: 0.0086 T23: 0.0008 REMARK 3 L TENSOR REMARK 3 L11: 11.1733 L22: 13.0955 REMARK 3 L33: 6.1626 L12: -6.0478 REMARK 3 L13: 0.0411 L23: 0.0403 REMARK 3 S TENSOR REMARK 3 S11: 0.1870 S12: -0.4461 S13: 0.1682 REMARK 3 S21: -0.1214 S22: -0.0003 S23: -0.3134 REMARK 3 S31: -0.3135 S32: -0.1428 S33: -0.1867 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.00 REMARK 3 ION PROBE RADIUS : 0.70 REMARK 3 SHRINKAGE RADIUS : 0.70 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6ITU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-DEC-18. REMARK 100 THE DEPOSITION ID IS D_1300009916. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-SEP-11 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 3.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E+ SUPERBRIGHT REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5419 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13797 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.170 REMARK 200 RESOLUTION RANGE LOW (A) : 32.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : 0.05600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 26.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.17 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.29 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.36900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1NTV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM GLYCINE (PH3.3), 2000 MM REMARK 280 (NH4)2SO4, 50 MM NACL AND 50 MM KCL, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 289.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.51400 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 36.25700 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 36.25700 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 72.51400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1850 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9400 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 ARG A 3 REMARK 465 ALA A 4 REMARK 465 PHE A 5 REMARK 465 SER A 6 REMARK 465 ARG A 7 REMARK 465 LYS A 8 REMARK 465 LYS A 9 REMARK 465 ASP A 10 REMARK 465 LYS A 11 REMARK 465 THR A 12 REMARK 465 TRP A 13 REMARK 465 MET A 14 REMARK 465 GLU A 161 REMARK 465 THR A 162 REMARK 465 ARG A 163 REMARK 465 LYS A 164 REMARK 465 GLN A 165 REMARK 465 ILE A 166 REMARK 465 ALA A 167 REMARK 465 GLY A 168 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 23 -124.41 -132.16 REMARK 500 LYS A 108 -52.52 -29.24 REMARK 500 LYS A 158 -169.71 -100.35 REMARK 500 ASP A 159 148.27 73.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 101 DBREF 6ITU A 1 168 UNP Q9UBP9 GULP1_HUMAN 1 168 DBREF 6ITU B 2 13 PDB 6ITU 6ITU 2 13 SEQRES 1 A 168 MET ASN ARG ALA PHE SER ARG LYS LYS ASP LYS THR TRP SEQRES 2 A 168 MET HIS THR PRO GLU ALA LEU SER LYS HIS PHE ILE PRO SEQRES 3 A 168 TYR ASN ALA LYS PHE LEU GLY SER THR GLU VAL GLU GLN SEQRES 4 A 168 PRO LYS GLY THR GLU VAL VAL ARG ASP ALA VAL ARG LYS SEQRES 5 A 168 LEU LYS PHE ALA ARG HIS ILE LYS LYS SER GLU GLY GLN SEQRES 6 A 168 LYS ILE PRO LYS VAL GLU LEU GLN ILE SER ILE TYR GLY SEQRES 7 A 168 VAL LYS ILE LEU GLU PRO LYS THR LYS GLU VAL GLN HIS SEQRES 8 A 168 ASN CYS GLN LEU HIS ARG ILE SER PHE CYS ALA ASP ASP SEQRES 9 A 168 LYS THR ASP LYS ARG ILE PHE THR PHE ILE CYS LYS ASP SEQRES 10 A 168 SER GLU SER ASN LYS HIS LEU CYS TYR VAL PHE ASP SER SEQRES 11 A 168 GLU LYS CYS ALA GLU GLU ILE THR LEU THR ILE GLY GLN SEQRES 12 A 168 ALA PHE ASP LEU ALA TYR ARG LYS PHE LEU GLU SER GLY SEQRES 13 A 168 GLY LYS ASP VAL GLU THR ARG LYS GLN ILE ALA GLY SEQRES 1 B 12 ASN GLY TYR GLU ASN PRO THR TYR LYS PHE PHE GLU HET SO4 A 201 5 HET SO4 A 202 5 HET EDO B 101 4 HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 SO4 2(O4 S 2-) FORMUL 5 EDO C2 H6 O2 FORMUL 6 HOH *48(H2 O) HELIX 1 AA1 THR A 16 HIS A 23 1 8 HELIX 2 AA2 GLY A 42 GLU A 63 1 22 HELIX 3 AA3 CYS A 133 SER A 155 1 23 HELIX 4 AA4 THR B 8 GLU B 13 5 6 SHEET 1 AA1 8 GLU A 88 GLN A 94 0 SHEET 2 AA1 8 GLY A 78 GLU A 83 -1 N ILE A 81 O GLN A 90 SHEET 3 AA1 8 LYS A 69 SER A 75 -1 N GLU A 71 O LEU A 82 SHEET 4 AA1 8 ILE A 25 VAL A 37 -1 N TYR A 27 O LEU A 72 SHEET 5 AA1 8 HIS A 123 ASP A 129 -1 O CYS A 125 N THR A 35 SHEET 6 AA1 8 ILE A 110 LYS A 116 -1 N PHE A 113 O TYR A 126 SHEET 7 AA1 8 ILE A 98 ASP A 103 -1 N ALA A 102 O THR A 112 SHEET 8 AA1 8 GLY B 3 GLU B 5 -1 O TYR B 4 N CYS A 101 SITE 1 AC1 4 THR A 35 GLU A 36 HOH A 312 HOH A 317 SITE 1 AC2 5 ARG A 47 HIS A 96 ARG A 97 VAL A 160 SITE 2 AC2 5 PHE B 12 SITE 1 AC3 3 HIS A 58 SER A 62 HOH B 205 CRYST1 63.910 63.910 108.771 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015647 0.009034 0.000000 0.00000 SCALE2 0.000000 0.018068 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009194 0.00000