HEADER TRANSPORT PROTEIN/PROTEIN BINDING 27-NOV-18 6IU7 TITLE CRYSTAL STRUCTURE OF IMPORTIN-ALPHA1 BOUND TO THE 53BP1 NUCLEAR TITLE 2 LOCALIZATION SIGNAL (WILD-TYPE) COMPND MOL_ID: 1; COMPND 2 MOLECULE: IMPORTIN SUBUNIT ALPHA-1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: IMPORTIN ALPHA P1,KARYOPHERIN SUBUNIT ALPHA-2,PENDULIN,PORE COMPND 5 TARGETING COMPLEX 58 KDA SUBUNIT,PTAC58,RAG COHORT PROTEIN 1,SRP1- COMPND 6 ALPHA; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: PEPTIDE FROM TP53-BINDING PROTEIN 1; COMPND 10 CHAIN: B; COMPND 11 SYNONYM: P53BP1; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: KPNA2, RCH1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: TP53BP1; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS IMPORTIN, NLS, TRANSPORT PROTEIN, TRANSPORT PROTEIN-PROTEIN BINDING KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR Y.MATSUURA REVDAT 3 22-NOV-23 6IU7 1 REMARK REVDAT 2 20-FEB-19 6IU7 1 JRNL REVDAT 1 30-JAN-19 6IU7 0 JRNL AUTH Y.MATSUURA JRNL TITL STRUCTURAL AND BIOCHEMICAL CHARACTERIZATION OF THE JRNL TITL 2 RECOGNITION OF THE 53BP1 NUCLEAR LOCALIZATION SIGNAL BY JRNL TITL 3 IMPORTIN-ALPHA. JRNL REF BIOCHEM. BIOPHYS. RES. V. 510 236 2019 JRNL REF 2 COMMUN. JRNL REFN ESSN 1090-2104 JRNL PMID 30685087 JRNL DOI 10.1016/J.BBRC.2019.01.075 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.97 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 54836 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.155 REMARK 3 R VALUE (WORKING SET) : 0.154 REMARK 3 FREE R VALUE : 0.185 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 2746 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.9780 - 5.1513 0.98 2743 166 0.1556 0.1589 REMARK 3 2 5.1513 - 4.0912 1.00 2719 132 0.1341 0.1740 REMARK 3 3 4.0912 - 3.5748 1.00 2649 151 0.1323 0.1621 REMARK 3 4 3.5748 - 3.2482 1.00 2659 128 0.1546 0.1862 REMARK 3 5 3.2482 - 3.0156 0.97 2568 127 0.1626 0.2134 REMARK 3 6 3.0156 - 2.8379 0.99 2630 124 0.1642 0.1991 REMARK 3 7 2.8379 - 2.6958 1.00 2640 129 0.1567 0.1920 REMARK 3 8 2.6958 - 2.5785 1.00 2598 130 0.1564 0.1998 REMARK 3 9 2.5785 - 2.4793 0.99 2634 121 0.1570 0.2204 REMARK 3 10 2.4793 - 2.3938 1.00 2625 114 0.1472 0.1926 REMARK 3 11 2.3938 - 2.3189 1.00 2588 129 0.1453 0.1676 REMARK 3 12 2.3189 - 2.2527 1.00 2599 152 0.1408 0.1986 REMARK 3 13 2.2527 - 2.1934 0.99 2562 147 0.1479 0.1789 REMARK 3 14 2.1934 - 2.1399 0.97 2569 113 0.1547 0.1972 REMARK 3 15 2.1399 - 2.0912 0.98 2493 147 0.1544 0.1685 REMARK 3 16 2.0912 - 2.0467 0.99 2591 150 0.1651 0.1775 REMARK 3 17 2.0467 - 2.0058 0.99 2546 153 0.1865 0.2225 REMARK 3 18 2.0058 - 1.9680 0.99 2579 129 0.1999 0.2103 REMARK 3 19 1.9680 - 1.9328 0.99 2544 153 0.2107 0.2466 REMARK 3 20 1.9328 - 1.9001 0.99 2554 151 0.2281 0.2515 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.510 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.77 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 75:96) REMARK 3 ORIGIN FOR THE GROUP (A): 6.3859 -16.3644 -18.0288 REMARK 3 T TENSOR REMARK 3 T11: 0.3278 T22: 0.2241 REMARK 3 T33: 0.2719 T12: -0.0531 REMARK 3 T13: -0.0743 T23: -0.0341 REMARK 3 L TENSOR REMARK 3 L11: 3.3541 L22: 0.4479 REMARK 3 L33: 3.8950 L12: -0.9024 REMARK 3 L13: -1.9351 L23: 0.6507 REMARK 3 S TENSOR REMARK 3 S11: 0.1758 S12: -0.0599 S13: -0.2964 REMARK 3 S21: 0.3943 S22: -0.1118 S23: -0.0451 REMARK 3 S31: 0.3138 S32: 0.2788 S33: -0.0145 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 97:123) REMARK 3 ORIGIN FOR THE GROUP (A): 3.9191 -8.4946 -8.9211 REMARK 3 T TENSOR REMARK 3 T11: 0.2899 T22: 0.1868 REMARK 3 T33: 0.1834 T12: -0.0526 REMARK 3 T13: 0.0042 T23: -0.0169 REMARK 3 L TENSOR REMARK 3 L11: 3.7445 L22: 3.2646 REMARK 3 L33: 3.8177 L12: 0.6250 REMARK 3 L13: 0.9917 L23: -0.4140 REMARK 3 S TENSOR REMARK 3 S11: 0.1302 S12: -0.4040 S13: -0.2682 REMARK 3 S21: 0.5668 S22: -0.0863 S23: 0.1954 REMARK 3 S31: 0.0529 S32: -0.2603 S33: -0.0155 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 124:213) REMARK 3 ORIGIN FOR THE GROUP (A): 7.9064 4.8448 -16.8293 REMARK 3 T TENSOR REMARK 3 T11: 0.1465 T22: 0.1378 REMARK 3 T33: 0.1030 T12: -0.0072 REMARK 3 T13: -0.0163 T23: -0.0078 REMARK 3 L TENSOR REMARK 3 L11: 1.6536 L22: 2.4771 REMARK 3 L33: 0.6406 L12: 0.0661 REMARK 3 L13: -0.0866 L23: 0.2086 REMARK 3 S TENSOR REMARK 3 S11: 0.0439 S12: 0.0878 S13: -0.0319 REMARK 3 S21: -0.0843 S22: -0.0057 S23: -0.0243 REMARK 3 S31: 0.1032 S32: -0.0091 S33: -0.0407 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 214:240) REMARK 3 ORIGIN FOR THE GROUP (A): -1.7016 16.1867 -16.5889 REMARK 3 T TENSOR REMARK 3 T11: 0.1769 T22: 0.1392 REMARK 3 T33: 0.1859 T12: 0.0170 REMARK 3 T13: -0.0089 T23: -0.0078 REMARK 3 L TENSOR REMARK 3 L11: 1.9342 L22: 1.6478 REMARK 3 L33: 2.6592 L12: -0.4486 REMARK 3 L13: 0.3099 L23: -1.1431 REMARK 3 S TENSOR REMARK 3 S11: 0.0336 S12: 0.0470 S13: 0.0462 REMARK 3 S21: -0.2472 S22: -0.0489 S23: 0.2012 REMARK 3 S31: 0.1999 S32: -0.0247 S33: 0.0030 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 241:254) REMARK 3 ORIGIN FOR THE GROUP (A): 10.4527 24.8162 -12.0313 REMARK 3 T TENSOR REMARK 3 T11: 0.1706 T22: 0.1667 REMARK 3 T33: 0.2610 T12: -0.0353 REMARK 3 T13: 0.0222 T23: 0.0108 REMARK 3 L TENSOR REMARK 3 L11: 6.0834 L22: 3.0335 REMARK 3 L33: 7.1809 L12: -1.8833 REMARK 3 L13: 5.5252 L23: -1.5835 REMARK 3 S TENSOR REMARK 3 S11: -0.0303 S12: 0.1725 S13: 0.4991 REMARK 3 S21: -0.0891 S22: -0.0250 S23: -0.1619 REMARK 3 S31: -0.3413 S32: 0.2278 S33: 0.0807 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 255:268) REMARK 3 ORIGIN FOR THE GROUP (A): -7.3395 22.1677 -16.1943 REMARK 3 T TENSOR REMARK 3 T11: 0.1771 T22: 0.1756 REMARK 3 T33: 0.1801 T12: 0.0195 REMARK 3 T13: -0.0416 T23: 0.0035 REMARK 3 L TENSOR REMARK 3 L11: 3.4947 L22: 3.8368 REMARK 3 L33: 3.6089 L12: 0.4393 REMARK 3 L13: -1.0634 L23: -0.5754 REMARK 3 S TENSOR REMARK 3 S11: 0.0087 S12: 0.0799 S13: -0.1912 REMARK 3 S21: -0.3577 S22: -0.2063 S23: 0.2150 REMARK 3 S31: 0.0323 S32: -0.1017 S33: 0.1929 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 269:337) REMARK 3 ORIGIN FOR THE GROUP (A): -3.2469 30.5790 -4.9738 REMARK 3 T TENSOR REMARK 3 T11: 0.1711 T22: 0.1642 REMARK 3 T33: 0.2117 T12: 0.0114 REMARK 3 T13: 0.0523 T23: -0.0028 REMARK 3 L TENSOR REMARK 3 L11: 1.4477 L22: 2.4652 REMARK 3 L33: 1.9367 L12: -1.3058 REMARK 3 L13: -0.7836 L23: 0.9199 REMARK 3 S TENSOR REMARK 3 S11: 0.1666 S12: 0.0562 S13: 0.3147 REMARK 3 S21: -0.2242 S22: -0.0149 S23: -0.2780 REMARK 3 S31: -0.2317 S32: 0.0144 S33: -0.1098 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 338:433) REMARK 3 ORIGIN FOR THE GROUP (A): -10.9030 35.9980 12.7293 REMARK 3 T TENSOR REMARK 3 T11: 0.1326 T22: 0.2006 REMARK 3 T33: 0.1785 T12: 0.0021 REMARK 3 T13: -0.0141 T23: -0.0448 REMARK 3 L TENSOR REMARK 3 L11: 2.0934 L22: 1.9558 REMARK 3 L33: 2.1512 L12: -0.1588 REMARK 3 L13: -0.7757 L23: 0.7344 REMARK 3 S TENSOR REMARK 3 S11: 0.0313 S12: -0.3369 S13: 0.1741 REMARK 3 S21: 0.1194 S22: 0.0464 S23: -0.1948 REMARK 3 S31: -0.0171 S32: 0.1904 S33: -0.0801 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN A AND RESID 434:456) REMARK 3 ORIGIN FOR THE GROUP (A): -4.5379 42.8458 24.3236 REMARK 3 T TENSOR REMARK 3 T11: 0.3956 T22: 0.6678 REMARK 3 T33: 0.4501 T12: -0.0439 REMARK 3 T13: -0.1186 T23: -0.2086 REMARK 3 L TENSOR REMARK 3 L11: 1.4566 L22: 8.2995 REMARK 3 L33: 2.8509 L12: -0.5000 REMARK 3 L13: -0.5689 L23: -0.6321 REMARK 3 S TENSOR REMARK 3 S11: 0.0980 S12: -0.7105 S13: 0.5610 REMARK 3 S21: 0.5300 S22: -0.0492 S23: -0.8651 REMARK 3 S31: -0.1661 S32: 0.7830 S33: -0.0400 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN A AND RESID 457:496) REMARK 3 ORIGIN FOR THE GROUP (A): -5.6619 39.5646 33.7146 REMARK 3 T TENSOR REMARK 3 T11: 0.7923 T22: 0.9750 REMARK 3 T33: 0.3767 T12: -0.0196 REMARK 3 T13: -0.1039 T23: -0.1124 REMARK 3 L TENSOR REMARK 3 L11: 3.5780 L22: 4.6153 REMARK 3 L33: 0.7034 L12: -0.9385 REMARK 3 L13: 0.3235 L23: -1.0867 REMARK 3 S TENSOR REMARK 3 S11: -0.1655 S12: -1.0471 S13: 0.1738 REMARK 3 S21: 1.4159 S22: 0.1860 S23: -0.3768 REMARK 3 S31: -0.0483 S32: 0.6203 S33: -0.0374 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN B AND RESID 1665:1671) REMARK 3 ORIGIN FOR THE GROUP (A): 2.6984 31.5792 8.3812 REMARK 3 T TENSOR REMARK 3 T11: 0.2845 T22: 0.3555 REMARK 3 T33: 0.3348 T12: 0.0328 REMARK 3 T13: -0.0769 T23: -0.1064 REMARK 3 L TENSOR REMARK 3 L11: 2.1346 L22: 2.0931 REMARK 3 L33: 1.2875 L12: 2.0109 REMARK 3 L13: 1.3234 L23: 0.9752 REMARK 3 S TENSOR REMARK 3 S11: 0.2966 S12: -0.4303 S13: -0.1644 REMARK 3 S21: 0.1121 S22: -0.1471 S23: 0.0121 REMARK 3 S31: 0.3379 S32: 0.5875 S33: -0.3088 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: (CHAIN B AND RESID 1672:1676) REMARK 3 ORIGIN FOR THE GROUP (A): 0.2924 15.7108 4.9910 REMARK 3 T TENSOR REMARK 3 T11: 0.6213 T22: 0.4665 REMARK 3 T33: 0.4908 T12: 0.1975 REMARK 3 T13: -0.0005 T23: -0.0283 REMARK 3 L TENSOR REMARK 3 L11: 2.0052 L22: 1.3098 REMARK 3 L33: 9.8184 L12: 4.2295 REMARK 3 L13: 1.4543 L23: 0.4043 REMARK 3 S TENSOR REMARK 3 S11: 0.0607 S12: -0.7088 S13: -0.2867 REMARK 3 S21: 0.6752 S22: 0.0643 S23: -0.3129 REMARK 3 S31: 0.5911 S32: 0.1787 S33: -0.1033 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: (CHAIN B AND RESID 1677:1686) REMARK 3 ORIGIN FOR THE GROUP (A): -2.1045 6.8687 -7.2201 REMARK 3 T TENSOR REMARK 3 T11: 0.1483 T22: 0.2263 REMARK 3 T33: 0.2159 T12: -0.0054 REMARK 3 T13: 0.0272 T23: -0.0219 REMARK 3 L TENSOR REMARK 3 L11: 1.7584 L22: 4.4653 REMARK 3 L33: 5.0787 L12: -0.3022 REMARK 3 L13: 0.3286 L23: 2.9129 REMARK 3 S TENSOR REMARK 3 S11: 0.1089 S12: -0.0059 S13: 0.0028 REMARK 3 S21: 0.2879 S22: -0.4067 S23: 0.5826 REMARK 3 S31: 0.2143 S32: -0.5501 S33: 0.1933 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6IU7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 05-DEC-18. REMARK 100 THE DEPOSITION ID IS D_1300009945. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JUN-18 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 6.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.1 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54893 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 32.973 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.07200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.94 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.67400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5X8N REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM CITRATE, HEPES, DTT, PH 6.7, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 39.73000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.36000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.07500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 48.36000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 39.73000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 45.07500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18730 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 72 REMARK 465 THR A 73 REMARK 465 VAL A 74 REMARK 465 SER A 497 REMARK 465 VAL A 498 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 576 O HOH A 578 2.16 REMARK 500 O HOH A 600 O HOH A 722 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 258 NE - CZ - NH1 ANGL. DEV. = -4.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 239 154.90 81.31 REMARK 500 LYS A 432 53.50 -93.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6IUA RELATED DB: PDB DBREF 6IU7 A 72 498 UNP P52293 IMA1_MOUSE 72 498 DBREF 6IU7 B 1665 1686 UNP Q12888 TP53B_HUMAN 1665 1686 SEQRES 1 A 427 GLY THR VAL ASN TRP SER VAL GLU ASP ILE VAL LYS GLY SEQRES 2 A 427 ILE ASN SER ASN ASN LEU GLU SER GLN LEU GLN ALA THR SEQRES 3 A 427 GLN ALA ALA ARG LYS LEU LEU SER ARG GLU LYS GLN PRO SEQRES 4 A 427 PRO ILE ASP ASN ILE ILE ARG ALA GLY LEU ILE PRO LYS SEQRES 5 A 427 PHE VAL SER PHE LEU GLY LYS THR ASP CYS SER PRO ILE SEQRES 6 A 427 GLN PHE GLU SER ALA TRP ALA LEU THR ASN ILE ALA SER SEQRES 7 A 427 GLY THR SER GLU GLN THR LYS ALA VAL VAL ASP GLY GLY SEQRES 8 A 427 ALA ILE PRO ALA PHE ILE SER LEU LEU ALA SER PRO HIS SEQRES 9 A 427 ALA HIS ILE SER GLU GLN ALA VAL TRP ALA LEU GLY ASN SEQRES 10 A 427 ILE ALA GLY ASP GLY SER ALA PHE ARG ASP LEU VAL ILE SEQRES 11 A 427 LYS HIS GLY ALA ILE ASP PRO LEU LEU ALA LEU LEU ALA SEQRES 12 A 427 VAL PRO ASP LEU SER THR LEU ALA CYS GLY TYR LEU ARG SEQRES 13 A 427 ASN LEU THR TRP THR LEU SER ASN LEU CYS ARG ASN LYS SEQRES 14 A 427 ASN PRO ALA PRO PRO LEU ASP ALA VAL GLU GLN ILE LEU SEQRES 15 A 427 PRO THR LEU VAL ARG LEU LEU HIS HIS ASN ASP PRO GLU SEQRES 16 A 427 VAL LEU ALA ASP SER CYS TRP ALA ILE SER TYR LEU THR SEQRES 17 A 427 ASP GLY PRO ASN GLU ARG ILE GLU MET VAL VAL LYS LYS SEQRES 18 A 427 GLY VAL VAL PRO GLN LEU VAL LYS LEU LEU GLY ALA THR SEQRES 19 A 427 GLU LEU PRO ILE VAL THR PRO ALA LEU ARG ALA ILE GLY SEQRES 20 A 427 ASN ILE VAL THR GLY THR ASP GLU GLN THR GLN LYS VAL SEQRES 21 A 427 ILE ASP ALA GLY ALA LEU ALA VAL PHE PRO SER LEU LEU SEQRES 22 A 427 THR ASN PRO LYS THR ASN ILE GLN LYS GLU ALA THR TRP SEQRES 23 A 427 THR MET SER ASN ILE THR ALA GLY ARG GLN ASP GLN ILE SEQRES 24 A 427 GLN GLN VAL VAL ASN HIS GLY LEU VAL PRO PHE LEU VAL SEQRES 25 A 427 GLY VAL LEU SER LYS ALA ASP PHE LYS THR GLN LYS GLU SEQRES 26 A 427 ALA ALA TRP ALA ILE THR ASN TYR THR SER GLY GLY THR SEQRES 27 A 427 VAL GLU GLN ILE VAL TYR LEU VAL HIS CYS GLY ILE ILE SEQRES 28 A 427 GLU PRO LEU MET ASN LEU LEU SER ALA LYS ASP THR LYS SEQRES 29 A 427 ILE ILE GLN VAL ILE LEU ASP ALA ILE SER ASN ILE PHE SEQRES 30 A 427 GLN ALA ALA GLU LYS LEU GLY GLU THR GLU LYS LEU SER SEQRES 31 A 427 ILE MET ILE GLU GLU CYS GLY GLY LEU ASP LYS ILE GLU SEQRES 32 A 427 ALA LEU GLN ARG HIS GLU ASN GLU SER VAL TYR LYS ALA SEQRES 33 A 427 SER LEU ASN LEU ILE GLU LYS TYR PHE SER VAL SEQRES 1 B 22 SER GLY LYS ARG LYS LEU ILE THR SER GLU GLU GLU ARG SEQRES 2 B 22 SER PRO ALA LYS ARG GLY ARG LYS SER FORMUL 3 HOH *316(H2 O) HELIX 1 AA1 SER A 77 ASN A 86 1 10 HELIX 2 AA2 ASN A 89 SER A 105 1 17 HELIX 3 AA3 PRO A 111 ALA A 118 1 8 HELIX 4 AA4 LEU A 120 GLY A 129 1 10 HELIX 5 AA5 CYS A 133 SER A 149 1 17 HELIX 6 AA6 THR A 151 GLY A 161 1 11 HELIX 7 AA7 GLY A 162 LEU A 171 1 10 HELIX 8 AA8 HIS A 175 GLY A 191 1 17 HELIX 9 AA9 GLY A 193 HIS A 203 1 11 HELIX 10 AB1 ALA A 205 LEU A 212 1 8 HELIX 11 AB2 ASP A 217 LEU A 221 5 5 HELIX 12 AB3 ALA A 222 ARG A 238 1 17 HELIX 13 AB4 PRO A 245 HIS A 261 1 17 HELIX 14 AB5 ASP A 264 THR A 279 1 16 HELIX 15 AB6 PRO A 282 LYS A 292 1 11 HELIX 16 AB7 VAL A 294 GLY A 303 1 10 HELIX 17 AB8 GLU A 306 VAL A 321 1 16 HELIX 18 AB9 THR A 324 ALA A 334 1 11 HELIX 19 AC1 GLY A 335 ALA A 338 5 4 HELIX 20 AC2 VAL A 339 LEU A 344 1 6 HELIX 21 AC3 LYS A 348 ALA A 364 1 17 HELIX 22 AC4 ARG A 366 HIS A 376 1 11 HELIX 23 AC5 GLY A 377 LYS A 388 1 12 HELIX 24 AC6 ASP A 390 GLY A 408 1 19 HELIX 25 AC7 THR A 409 CYS A 419 1 11 HELIX 26 AC8 ILE A 421 LEU A 428 1 8 HELIX 27 AC9 LEU A 429 ALA A 431 5 3 HELIX 28 AD1 ASP A 433 LEU A 454 1 22 HELIX 29 AD2 GLU A 456 CYS A 467 1 12 HELIX 30 AD3 GLY A 468 LEU A 476 1 9 HELIX 31 AD4 GLN A 477 HIS A 479 5 3 HELIX 32 AD5 ASN A 481 PHE A 496 1 16 HELIX 33 AD6 SER B 1673 ARG B 1677 5 5 CISPEP 1 ASN A 241 PRO A 242 0 -1.12 CRYST1 79.460 90.150 96.720 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012585 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011093 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010339 0.00000