HEADER TRANSFERASE,DNA BINDING PROTEIN,PROTEIN 20-DEC-18 6IZO TITLE CRYSTAL STRUCTURE OF DNA POLYMERASE SLIDING CLAMP FROM CAULOBACTER TITLE 2 CRESCENTUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA SLIDING CLAMP; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: SLIDING CLAMP,BETA-CLAMP PROCESSIVITY FACTOR,DNA POLYMERASE COMPND 5 III BETA SLIDING CLAMP SUBUNIT,DNA POLYMERASE III SUBUNIT BETA; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAULOBACTER VIBRIOIDES CB15; SOURCE 3 ORGANISM_COMMON: CAULOBACTER CRESCENTUS; SOURCE 4 ORGANISM_TAXID: 190650; SOURCE 5 GENE: DNAN, CC_0156; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI K-12; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 83333; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: K-12 KEYWDS HOMODIMER, TRANSFERASE, DNA BINDING PROTEIN, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR X.JIANG,L.ZHANG,M.TENG,X.LI REVDAT 3 22-NOV-23 6IZO 1 REMARK REVDAT 2 10-JUN-20 6IZO 1 JRNL REVDAT 1 27-NOV-19 6IZO 0 SPRSDE 27-NOV-19 6IZO 5WYP JRNL AUTH X.JIANG,L.ZHANG,J.AN,M.WANG,M.TENG,Q.GUO,X.LI JRNL TITL CAULOBACTER CRESCENTUS BETA SLIDING CLAMP EMPLOYS A JRNL TITL 2 NONCANONICAL REGULATORY MODEL OF DNA REPLICATION. JRNL REF FEBS J. V. 287 2292 2020 JRNL REFN ISSN 1742-464X JRNL PMID 31725950 JRNL DOI 10.1111/FEBS.15138 REMARK 2 REMARK 2 RESOLUTION. 1.94 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.94 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 60347 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3213 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.94 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.99 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4453 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.53 REMARK 3 BIN R VALUE (WORKING SET) : 0.2760 REMARK 3 BIN FREE R VALUE SET COUNT : 245 REMARK 3 BIN FREE R VALUE : 0.2950 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5529 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 19 REMARK 3 SOLVENT ATOMS : 156 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 31.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.11 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.75000 REMARK 3 B22 (A**2) : 3.96000 REMARK 3 B33 (A**2) : -0.15000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.74000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.151 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.133 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.091 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.216 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.955 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5643 ; 0.010 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 5477 ; 0.007 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7672 ; 1.541 ; 1.989 REMARK 3 BOND ANGLES OTHERS (DEGREES): 12573 ; 0.942 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 736 ; 6.121 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 226 ;36.364 ;24.071 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 898 ;13.362 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 41 ;16.533 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 918 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6383 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1166 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 SF FILE CONTAINS FRIEDEL PAIRS UNDER I/F_MINUS AND I/F_PLUS REMARK 3 COLUMNS. REMARK 3 REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 4 REMARK 4 6IZO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-DEC-18. REMARK 100 THE DEPOSITION ID IS D_1300010215. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-APR-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 63559 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.940 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.94 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.380 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4TR8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.59 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG2000, 0.1M CALCIUM ACETATE, REMARK 280 0.1M NA ACETATE PH 5.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 29.74700 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 GLY A -3 REMARK 465 ARG A -2 REMARK 465 GLY A -1 REMARK 465 GLY A 195 REMARK 465 GLU A 282 REMARK 465 LYS A 283 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 GLY B -3 REMARK 465 ARG B -2 REMARK 465 GLY B -1 REMARK 465 SER B 92 REMARK 465 GLY B 93 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 0 OG REMARK 470 ARG A 23 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 24 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 151 CG CD OE1 OE2 REMARK 470 ARG A 153 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 191 CG CD OE1 OE2 REMARK 470 VAL A 194 CG1 CG2 REMARK 470 ILE A 196 CG1 CG2 CD1 REMARK 470 GLU A 218 CG CD OE1 OE2 REMARK 470 ARG A 252 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 256 CG CD NE CZ NH1 NH2 REMARK 470 SER A 284 OG REMARK 470 ARG A 285 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 301 CG CD NE CZ NH1 NH2 REMARK 470 MET A 303 CG SD CE REMARK 470 GLU A 304 CG CD OE1 OE2 REMARK 470 VAL A 372 CG1 CG2 REMARK 470 SER B 0 OG REMARK 470 ARG B 23 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 24 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 94 CG OD1 OD2 REMARK 470 ASP B 95 CG OD1 OD2 REMARK 470 GLU B 150 CG CD OE1 OE2 REMARK 470 GLU B 151 CG CD OE1 OE2 REMARK 470 ARG B 153 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 191 CG CD OE1 OE2 REMARK 470 ARG B 252 CG CD NE CZ NH1 NH2 REMARK 470 VAL B 253 CG1 CG2 REMARK 470 ARG B 256 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 282 CG CD OE1 OE2 REMARK 470 LYS B 283 CG CD CE NZ REMARK 470 ARG B 301 CG CD NE CZ NH1 NH2 REMARK 470 VAL B 372 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 49 -27.52 79.59 REMARK 500 ARG A 153 47.83 -98.00 REMARK 500 ASP A 249 81.79 -65.30 REMARK 500 ALA A 305 -12.29 78.86 REMARK 500 ALA A 347 -95.67 -105.02 REMARK 500 LEU B 49 -34.64 79.96 REMARK 500 ALA B 347 -96.41 -110.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 402 DBREF 6IZO A 1 372 UNP P0CAU5 DPO3B_CAUVC 1 372 DBREF 6IZO B 1 372 UNP P0CAU5 DPO3B_CAUVC 1 372 SEQADV 6IZO MET A -19 UNP P0CAU5 INITIATING METHIONINE SEQADV 6IZO GLY A -18 UNP P0CAU5 EXPRESSION TAG SEQADV 6IZO SER A -17 UNP P0CAU5 EXPRESSION TAG SEQADV 6IZO SER A -16 UNP P0CAU5 EXPRESSION TAG SEQADV 6IZO HIS A -15 UNP P0CAU5 EXPRESSION TAG SEQADV 6IZO HIS A -14 UNP P0CAU5 EXPRESSION TAG SEQADV 6IZO HIS A -13 UNP P0CAU5 EXPRESSION TAG SEQADV 6IZO HIS A -12 UNP P0CAU5 EXPRESSION TAG SEQADV 6IZO HIS A -11 UNP P0CAU5 EXPRESSION TAG SEQADV 6IZO HIS A -10 UNP P0CAU5 EXPRESSION TAG SEQADV 6IZO SER A -9 UNP P0CAU5 EXPRESSION TAG SEQADV 6IZO SER A -8 UNP P0CAU5 EXPRESSION TAG SEQADV 6IZO GLY A -7 UNP P0CAU5 EXPRESSION TAG SEQADV 6IZO LEU A -6 UNP P0CAU5 EXPRESSION TAG SEQADV 6IZO VAL A -5 UNP P0CAU5 EXPRESSION TAG SEQADV 6IZO PRO A -4 UNP P0CAU5 EXPRESSION TAG SEQADV 6IZO GLY A -3 UNP P0CAU5 EXPRESSION TAG SEQADV 6IZO ARG A -2 UNP P0CAU5 EXPRESSION TAG SEQADV 6IZO GLY A -1 UNP P0CAU5 EXPRESSION TAG SEQADV 6IZO SER A 0 UNP P0CAU5 EXPRESSION TAG SEQADV 6IZO MET B -19 UNP P0CAU5 INITIATING METHIONINE SEQADV 6IZO GLY B -18 UNP P0CAU5 EXPRESSION TAG SEQADV 6IZO SER B -17 UNP P0CAU5 EXPRESSION TAG SEQADV 6IZO SER B -16 UNP P0CAU5 EXPRESSION TAG SEQADV 6IZO HIS B -15 UNP P0CAU5 EXPRESSION TAG SEQADV 6IZO HIS B -14 UNP P0CAU5 EXPRESSION TAG SEQADV 6IZO HIS B -13 UNP P0CAU5 EXPRESSION TAG SEQADV 6IZO HIS B -12 UNP P0CAU5 EXPRESSION TAG SEQADV 6IZO HIS B -11 UNP P0CAU5 EXPRESSION TAG SEQADV 6IZO HIS B -10 UNP P0CAU5 EXPRESSION TAG SEQADV 6IZO SER B -9 UNP P0CAU5 EXPRESSION TAG SEQADV 6IZO SER B -8 UNP P0CAU5 EXPRESSION TAG SEQADV 6IZO GLY B -7 UNP P0CAU5 EXPRESSION TAG SEQADV 6IZO LEU B -6 UNP P0CAU5 EXPRESSION TAG SEQADV 6IZO VAL B -5 UNP P0CAU5 EXPRESSION TAG SEQADV 6IZO PRO B -4 UNP P0CAU5 EXPRESSION TAG SEQADV 6IZO GLY B -3 UNP P0CAU5 EXPRESSION TAG SEQADV 6IZO ARG B -2 UNP P0CAU5 EXPRESSION TAG SEQADV 6IZO GLY B -1 UNP P0CAU5 EXPRESSION TAG SEQADV 6IZO SER B 0 UNP P0CAU5 EXPRESSION TAG SEQRES 1 A 392 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 392 LEU VAL PRO GLY ARG GLY SER MET LYS LEU THR ILE GLU SEQRES 3 A 392 ARG ALA ALA LEU LEU LYS ALA LEU GLY HIS VAL GLN SER SEQRES 4 A 392 VAL VAL GLU ARG ARG ASN THR ILE PRO ILE LEU SER ASN SEQRES 5 A 392 ILE LEU LEU SER ALA GLU GLY ASP ARG LEU SER PHE SER SEQRES 6 A 392 ALA THR ASP LEU ASP MET GLU ILE ILE ASP GLU GLY PHE SEQRES 7 A 392 ALA GLN ILE ASP VAL PRO GLY GLN ILE THR ALA PRO ALA SEQRES 8 A 392 HIS THR LEU TYR GLU ILE VAL ARG LYS LEU PRO ASP GLY SEQRES 9 A 392 ALA ASP VAL SER LEU SER PHE SER GLY ASP ASP PRO ARG SEQRES 10 A 392 LEU VAL ILE GLN ALA GLY ARG SER ARG PHE ASN LEU PRO SEQRES 11 A 392 VAL LEU PRO ALA GLY ASP PHE PRO VAL MET SER SER ASP SEQRES 12 A 392 GLY LEU SER SER ARG ILE ALA VAL ASP THR ASN GLU LEU SEQRES 13 A 392 ILE ARG LEU ILE ASP LYS THR ARG PHE ALA ILE SER THR SEQRES 14 A 392 GLU GLU THR ARG TYR TYR LEU ASN GLY LEU TYR VAL HIS SEQRES 15 A 392 THR VAL ASN GLU GLY GLY GLU THR LYS LEU ARG ALA VAL SEQRES 16 A 392 ALA THR ASP GLY HIS ARG LEU ALA LEU ALA GLU MET PRO SEQRES 17 A 392 ALA PRO GLU GLY ALA VAL GLY ILE PRO GLY VAL ILE VAL SEQRES 18 A 392 PRO ARG LYS THR ILE ALA GLU ALA ARG ARG LEU MET GLU SEQRES 19 A 392 SER ALA GLY GLU THR VAL ASP LEU GLN VAL SER PRO GLN SEQRES 20 A 392 LYS VAL ARG PHE GLU PHE GLY ALA ALA ALA LEU THR SER SEQRES 21 A 392 LYS VAL ILE ASP GLY ALA PHE PRO ASP TYR MET ARG VAL SEQRES 22 A 392 ILE PRO ARG ASP ASN ALA LYS ILE LEU THR LEU ASP ASN SEQRES 23 A 392 ASP LEU PHE ALA LYS ALA VAL ASP ARG VAL ALA THR ILE SEQRES 24 A 392 SER ALA GLU LYS SER ARG SER VAL LYS LEU ALA VAL GLU SEQRES 25 A 392 PRO GLY ARG ILE THR LEU THR VAL ARG ASN MET GLU ALA SEQRES 26 A 392 GLY GLN ALA VAL GLU GLU VAL GLU VAL ASP TYR ASP GLY SEQRES 27 A 392 GLU PRO PHE GLU ILE GLY PHE ASN ALA ARG TYR LEU LEU SEQRES 28 A 392 ASP VAL CYS GLY GLN ILE ALA GLY PRO GLN ALA GLU PHE SEQRES 29 A 392 ARG PHE ALA ASP PRO ALA SER PRO THR LEU VAL VAL ASP SEQRES 30 A 392 PRO VAL ASP PRO GLY VAL LYS TYR VAL LEU MET PRO LEU SEQRES 31 A 392 ARG VAL SEQRES 1 B 392 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 392 LEU VAL PRO GLY ARG GLY SER MET LYS LEU THR ILE GLU SEQRES 3 B 392 ARG ALA ALA LEU LEU LYS ALA LEU GLY HIS VAL GLN SER SEQRES 4 B 392 VAL VAL GLU ARG ARG ASN THR ILE PRO ILE LEU SER ASN SEQRES 5 B 392 ILE LEU LEU SER ALA GLU GLY ASP ARG LEU SER PHE SER SEQRES 6 B 392 ALA THR ASP LEU ASP MET GLU ILE ILE ASP GLU GLY PHE SEQRES 7 B 392 ALA GLN ILE ASP VAL PRO GLY GLN ILE THR ALA PRO ALA SEQRES 8 B 392 HIS THR LEU TYR GLU ILE VAL ARG LYS LEU PRO ASP GLY SEQRES 9 B 392 ALA ASP VAL SER LEU SER PHE SER GLY ASP ASP PRO ARG SEQRES 10 B 392 LEU VAL ILE GLN ALA GLY ARG SER ARG PHE ASN LEU PRO SEQRES 11 B 392 VAL LEU PRO ALA GLY ASP PHE PRO VAL MET SER SER ASP SEQRES 12 B 392 GLY LEU SER SER ARG ILE ALA VAL ASP THR ASN GLU LEU SEQRES 13 B 392 ILE ARG LEU ILE ASP LYS THR ARG PHE ALA ILE SER THR SEQRES 14 B 392 GLU GLU THR ARG TYR TYR LEU ASN GLY LEU TYR VAL HIS SEQRES 15 B 392 THR VAL ASN GLU GLY GLY GLU THR LYS LEU ARG ALA VAL SEQRES 16 B 392 ALA THR ASP GLY HIS ARG LEU ALA LEU ALA GLU MET PRO SEQRES 17 B 392 ALA PRO GLU GLY ALA VAL GLY ILE PRO GLY VAL ILE VAL SEQRES 18 B 392 PRO ARG LYS THR ILE ALA GLU ALA ARG ARG LEU MET GLU SEQRES 19 B 392 SER ALA GLY GLU THR VAL ASP LEU GLN VAL SER PRO GLN SEQRES 20 B 392 LYS VAL ARG PHE GLU PHE GLY ALA ALA ALA LEU THR SER SEQRES 21 B 392 LYS VAL ILE ASP GLY ALA PHE PRO ASP TYR MET ARG VAL SEQRES 22 B 392 ILE PRO ARG ASP ASN ALA LYS ILE LEU THR LEU ASP ASN SEQRES 23 B 392 ASP LEU PHE ALA LYS ALA VAL ASP ARG VAL ALA THR ILE SEQRES 24 B 392 SER ALA GLU LYS SER ARG SER VAL LYS LEU ALA VAL GLU SEQRES 25 B 392 PRO GLY ARG ILE THR LEU THR VAL ARG ASN MET GLU ALA SEQRES 26 B 392 GLY GLN ALA VAL GLU GLU VAL GLU VAL ASP TYR ASP GLY SEQRES 27 B 392 GLU PRO PHE GLU ILE GLY PHE ASN ALA ARG TYR LEU LEU SEQRES 28 B 392 ASP VAL CYS GLY GLN ILE ALA GLY PRO GLN ALA GLU PHE SEQRES 29 B 392 ARG PHE ALA ASP PRO ALA SER PRO THR LEU VAL VAL ASP SEQRES 30 B 392 PRO VAL ASP PRO GLY VAL LYS TYR VAL LEU MET PRO LEU SEQRES 31 B 392 ARG VAL HET EDO A 401 4 HET PEG A 402 7 HET EDO B 401 4 HET EDO B 402 4 HETNAM EDO 1,2-ETHANEDIOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN EDO ETHYLENE GLYCOL FORMUL 3 EDO 3(C2 H6 O2) FORMUL 4 PEG C4 H10 O3 FORMUL 7 HOH *156(H2 O) HELIX 1 AA1 ARG A 7 SER A 19 1 13 HELIX 2 AA2 ILE A 27 LEU A 30 5 4 HELIX 3 AA3 ALA A 71 LEU A 81 1 11 HELIX 4 AA4 PRO A 113 PHE A 117 5 5 HELIX 5 AA5 THR A 133 LYS A 142 1 10 HELIX 6 AA6 THR A 143 ILE A 147 5 5 HELIX 7 AA7 TYR A 154 LEU A 156 5 3 HELIX 8 AA8 ARG A 203 GLU A 214 1 12 HELIX 9 AA9 ASP A 249 VAL A 253 5 5 HELIX 10 AB1 ASN A 266 THR A 278 1 13 HELIX 11 AB2 ALA A 327 ILE A 337 1 11 HELIX 12 AB3 ARG B 7 SER B 19 1 13 HELIX 13 AB4 ILE B 27 LEU B 30 5 4 HELIX 14 AB5 ALA B 71 LYS B 80 1 10 HELIX 15 AB6 PRO B 113 PHE B 117 5 5 HELIX 16 AB7 THR B 133 LYS B 142 1 10 HELIX 17 AB8 THR B 143 ILE B 147 5 5 HELIX 18 AB9 TYR B 154 LEU B 156 5 3 HELIX 19 AC1 ARG B 203 GLU B 214 1 12 HELIX 20 AC2 ASP B 249 ILE B 254 1 6 HELIX 21 AC3 ASN B 266 THR B 278 1 13 HELIX 22 AC4 ALA B 327 ILE B 337 1 11 SHEET 1 AA1 9 GLN A 60 VAL A 63 0 SHEET 2 AA1 9 LYS A 2 GLU A 6 -1 N THR A 4 O GLN A 60 SHEET 3 AA1 9 ASP A 86 SER A 90 -1 O VAL A 87 N ILE A 5 SHEET 4 AA1 9 LEU A 98 ALA A 102 -1 O GLN A 101 N SER A 88 SHEET 5 AA1 9 SER A 105 LEU A 109 -1 O PHE A 107 N ILE A 100 SHEET 6 AA1 9 GLN B 307 GLU B 313 -1 O GLN B 307 N ASN A 108 SHEET 7 AA1 9 ARG B 295 ARG B 301 -1 N LEU B 298 O GLU B 310 SHEET 8 AA1 9 SER B 286 GLU B 292 -1 N LYS B 288 O THR B 299 SHEET 9 AA1 9 PHE B 321 ASN B 326 -1 O ILE B 323 N LEU B 289 SHEET 1 AA2 8 GLY A 65 PRO A 70 0 SHEET 2 AA2 8 ASN A 32 GLU A 38 -1 N ALA A 37 O GLY A 65 SHEET 3 AA2 8 ARG A 41 THR A 47 -1 O SER A 43 N SER A 36 SHEET 4 AA2 8 MET A 51 PHE A 58 -1 O ASP A 55 N PHE A 44 SHEET 5 AA2 8 ALA A 236 LYS A 241 -1 O THR A 239 N GLU A 52 SHEET 6 AA2 8 LYS A 228 PHE A 233 -1 N PHE A 233 O ALA A 236 SHEET 7 AA2 8 THR A 219 VAL A 224 -1 N ASP A 221 O GLU A 232 SHEET 8 AA2 8 ILE A 129 ASP A 132 -1 N VAL A 131 O VAL A 220 SHEET 1 AA3 8 VAL A 199 PRO A 202 0 SHEET 2 AA3 8 GLY A 158 GLU A 166 -1 N VAL A 161 O VAL A 199 SHEET 3 AA3 8 GLU A 169 THR A 177 -1 O ARG A 173 N HIS A 162 SHEET 4 AA3 8 ARG A 181 PRO A 188 -1 O ALA A 185 N ALA A 174 SHEET 5 AA3 8 ASP A 360 LEU A 367 -1 O LYS A 364 N LEU A 184 SHEET 6 AA3 8 THR A 353 ASP A 357 -1 N VAL A 355 O TYR A 365 SHEET 7 AA3 8 GLN A 341 PHE A 346 -1 N ARG A 345 O LEU A 354 SHEET 8 AA3 8 LYS A 260 ASP A 265 -1 N LYS A 260 O PHE A 346 SHEET 1 AA4 9 PHE A 321 ASN A 326 0 SHEET 2 AA4 9 SER A 286 GLU A 292 -1 N VAL A 291 O PHE A 321 SHEET 3 AA4 9 ARG A 295 ARG A 301 -1 O THR A 299 N LYS A 288 SHEET 4 AA4 9 GLN A 307 GLU A 313 -1 O GLU A 310 N LEU A 298 SHEET 5 AA4 9 SER B 105 LEU B 109 -1 O ASN B 108 N GLN A 307 SHEET 6 AA4 9 LEU B 98 ALA B 102 -1 N ILE B 100 O PHE B 107 SHEET 7 AA4 9 ASP B 86 SER B 90 -1 N SER B 90 O VAL B 99 SHEET 8 AA4 9 LYS B 2 GLU B 6 -1 N ILE B 5 O VAL B 87 SHEET 9 AA4 9 GLN B 60 VAL B 63 -1 O GLN B 60 N THR B 4 SHEET 1 AA5 8 GLY B 65 PRO B 70 0 SHEET 2 AA5 8 ASN B 32 GLU B 38 -1 N LEU B 35 O ILE B 67 SHEET 3 AA5 8 ARG B 41 THR B 47 -1 O SER B 43 N SER B 36 SHEET 4 AA5 8 MET B 51 PHE B 58 -1 O ASP B 55 N PHE B 44 SHEET 5 AA5 8 ALA B 237 LYS B 241 -1 O THR B 239 N GLU B 52 SHEET 6 AA5 8 LYS B 228 GLU B 232 -1 N PHE B 231 O LEU B 238 SHEET 7 AA5 8 THR B 219 VAL B 224 -1 N GLN B 223 O ARG B 230 SHEET 8 AA5 8 ILE B 129 ASP B 132 -1 N VAL B 131 O VAL B 220 SHEET 1 AA6 8 VAL B 199 PRO B 202 0 SHEET 2 AA6 8 GLY B 158 GLU B 166 -1 N VAL B 161 O VAL B 199 SHEET 3 AA6 8 GLU B 169 THR B 177 -1 O ARG B 173 N HIS B 162 SHEET 4 AA6 8 ARG B 181 PRO B 188 -1 O ALA B 185 N ALA B 174 SHEET 5 AA6 8 ASP B 360 LEU B 367 -1 O LYS B 364 N LEU B 184 SHEET 6 AA6 8 THR B 353 ASP B 357 -1 N THR B 353 O LEU B 367 SHEET 7 AA6 8 GLN B 341 PHE B 346 -1 N GLU B 343 O VAL B 356 SHEET 8 AA6 8 LYS B 260 ASP B 265 -1 N LEU B 262 O PHE B 344 SITE 1 AC1 1 ASP A 40 SITE 1 AC2 4 ASP A 267 GLY A 335 ALA A 338 GLY A 339 SITE 1 AC3 1 ASP B 40 SITE 1 AC4 2 GLU B 186 LYS B 364 CRYST1 84.108 59.494 87.245 90.00 92.45 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011889 0.000000 0.000508 0.00000 SCALE2 0.000000 0.016808 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011472 0.00000