HEADER DNA BINDING PROTEIN 21-DEC-18 6J08 TITLE CRYSTAL STRUCTURE OF HUMAN MAJIN AND TERB2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MEMBRANE-ANCHORED JUNCTION PROTEIN; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: NTD DOMAIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: TELOMERE REPEATS-BINDING BOUQUET FORMATION PROTEIN 2; COMPND 8 CHAIN: D, E, F; COMPND 9 FRAGMENT: TERB2 BINDING MOTIF; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MAJIN, C11ORF85; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PRSFDUET; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 GENE: TERB2, C15ORF43; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 17 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PRSFDUET KEYWDS TELOMERE, MEIOSIS, PROTEIN-PROTEIN COMPLEX, NUCLEAR ENVELOPE KEYWDS 2 ATTACHMENT, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.WANG,Y.CHEN,J.WU,C.HUANG,M.LEI REVDAT 2 27-MAR-24 6J08 1 REMARK REVDAT 1 27-FEB-19 6J08 0 JRNL AUTH Y.WANG,Y.CHEN,J.CHEN,L.WANG,L.NIE,J.LONG,H.CHANG,J.WU, JRNL AUTH 2 C.HUANG,M.LEI JRNL TITL THE MEIOTIC TERB1-TERB2-MAJIN COMPLEX TETHERS TELOMERES TO JRNL TITL 2 THE NUCLEAR ENVELOPE. JRNL REF NAT COMMUN V. 10 564 2019 JRNL REFN ESSN 2041-1723 JRNL PMID 30718482 JRNL DOI 10.1038/S41467-019-08437-1 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.19 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 13729 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.214 REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.262 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.820 REMARK 3 FREE R VALUE TEST SET COUNT : 662 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.1937 - 4.9542 1.00 2728 123 0.2117 0.2697 REMARK 3 2 4.9542 - 3.9346 1.00 2614 147 0.1876 0.2273 REMARK 3 3 3.9346 - 3.4379 1.00 2594 133 0.2234 0.2718 REMARK 3 4 3.4379 - 3.1238 1.00 2572 137 0.2386 0.2881 REMARK 3 5 3.1238 - 2.9001 1.00 2559 122 0.2626 0.3443 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.410 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.880 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 91.39 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): 20.6844 44.3325 41.1332 REMARK 3 T TENSOR REMARK 3 T11: 0.5345 T22: 0.5582 REMARK 3 T33: 0.5189 T12: 0.1285 REMARK 3 T13: 0.0211 T23: -0.0743 REMARK 3 L TENSOR REMARK 3 L11: 1.5501 L22: 2.9333 REMARK 3 L33: 1.5983 L12: -0.6634 REMARK 3 L13: 1.5316 L23: -1.2871 REMARK 3 S TENSOR REMARK 3 S11: 0.1009 S12: -0.0889 S13: -0.0001 REMARK 3 S21: 0.1045 S22: 0.0260 S23: 0.3740 REMARK 3 S31: -0.1350 S32: -0.0075 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN D REMARK 3 ORIGIN FOR THE GROUP (A): 17.3287 48.4194 35.4964 REMARK 3 T TENSOR REMARK 3 T11: 0.7028 T22: 0.5603 REMARK 3 T33: 0.8949 T12: 0.0849 REMARK 3 T13: -0.1586 T23: -0.0239 REMARK 3 L TENSOR REMARK 3 L11: 0.4094 L22: -0.3222 REMARK 3 L33: 2.2639 L12: -1.0472 REMARK 3 L13: -0.5165 L23: -0.7669 REMARK 3 S TENSOR REMARK 3 S11: 0.3218 S12: -0.3088 S13: 0.1408 REMARK 3 S21: 0.0767 S22: -0.0665 S23: 0.1340 REMARK 3 S31: -0.0739 S32: -0.0487 S33: -0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): 33.5423 58.2160 17.7406 REMARK 3 T TENSOR REMARK 3 T11: 0.4954 T22: 0.5792 REMARK 3 T33: 0.4470 T12: 0.0863 REMARK 3 T13: -0.0176 T23: -0.0328 REMARK 3 L TENSOR REMARK 3 L11: 1.2742 L22: 3.5610 REMARK 3 L33: 2.2451 L12: 0.7949 REMARK 3 L13: 0.3839 L23: -0.8415 REMARK 3 S TENSOR REMARK 3 S11: 0.0843 S12: -0.0711 S13: -0.0974 REMARK 3 S21: 0.0430 S22: -0.0361 S23: -0.1006 REMARK 3 S31: 0.1742 S32: 0.2571 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN E REMARK 3 ORIGIN FOR THE GROUP (A): 33.2719 52.1453 21.6876 REMARK 3 T TENSOR REMARK 3 T11: 0.7897 T22: 0.6521 REMARK 3 T33: 0.6458 T12: 0.1919 REMARK 3 T13: -0.0585 T23: 0.0137 REMARK 3 L TENSOR REMARK 3 L11: 1.2560 L22: 0.8228 REMARK 3 L33: 2.5195 L12: 2.0398 REMARK 3 L13: 1.2964 L23: -1.6423 REMARK 3 S TENSOR REMARK 3 S11: 0.3269 S12: -0.0673 S13: -0.2245 REMARK 3 S21: 0.5108 S22: -0.1558 S23: -0.2913 REMARK 3 S31: 0.4298 S32: 0.5451 S33: -0.0000 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN C REMARK 3 ORIGIN FOR THE GROUP (A): 16.3506 78.0625 10.5881 REMARK 3 T TENSOR REMARK 3 T11: 0.4945 T22: 0.4504 REMARK 3 T33: 0.5348 T12: 0.0523 REMARK 3 T13: 0.0858 T23: 0.0058 REMARK 3 L TENSOR REMARK 3 L11: 2.4562 L22: 1.2886 REMARK 3 L33: 2.7141 L12: -0.2518 REMARK 3 L13: -0.5331 L23: -0.0311 REMARK 3 S TENSOR REMARK 3 S11: -0.1437 S12: -0.0502 S13: -0.0878 REMARK 3 S21: -0.0030 S22: 0.1531 S23: 0.2032 REMARK 3 S31: -0.3799 S32: -0.0543 S33: 0.0000 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN F REMARK 3 ORIGIN FOR THE GROUP (A): 8.1072 78.8350 11.0017 REMARK 3 T TENSOR REMARK 3 T11: 0.7209 T22: 0.8629 REMARK 3 T33: 0.7134 T12: 0.2014 REMARK 3 T13: 0.0039 T23: -0.0032 REMARK 3 L TENSOR REMARK 3 L11: 1.5672 L22: 1.6066 REMARK 3 L33: 0.9746 L12: 0.7938 REMARK 3 L13: -0.4122 L23: 0.4316 REMARK 3 S TENSOR REMARK 3 S11: 0.6451 S12: 0.4744 S13: 0.3579 REMARK 3 S21: -0.4969 S22: -0.3036 S23: 0.1660 REMARK 3 S31: -0.8046 S32: -0.3729 S33: -0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6J08 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-JAN-19. REMARK 100 THE DEPOSITION ID IS D_1300010244. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-SEP-16; 14-SEP-16 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 6.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : SSRF; SSRF REMARK 200 BEAMLINE : BL18U1; BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97776; 0.97776 REMARK 200 MONOCHROMATOR : NULL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL; PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M; DECTRIS REMARK 200 PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13769 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 13.20 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 13.50 REMARK 200 R MERGE FOR SHELL (I) : 0.65500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM HEPES PH 6.8, 0.2 M POTASSIUM REMARK 280 THIOCYANATE, 22% (W/V) POLYETHYLENE GLYCOL 3350, 25% (V/V) REMARK 280 GLYCEROL, EVAPORATION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z REMARK 290 7555 -X+1/2,Y+1/2,-Z REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 53.86850 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 64.38350 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 53.86850 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 64.38350 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 53.86850 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 64.38350 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 53.86850 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 64.38350 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2560 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8900 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2640 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8270 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ILE A 33 REMARK 465 ARG A 34 REMARK 465 GLY A 35 REMARK 465 GLU A 36 REMARK 465 GLU A 37 REMARK 465 ILE A 38 REMARK 465 SER B 32 REMARK 465 ILE B 33 REMARK 465 ARG B 34 REMARK 465 GLY B 35 REMARK 465 GLU B 36 REMARK 465 GLU B 37 REMARK 465 THR E 174 REMARK 465 ASN E 206 REMARK 465 GLU E 207 REMARK 465 ILE E 208 REMARK 465 ASN E 209 REMARK 465 GLY C 35 REMARK 465 GLU C 36 REMARK 465 GLU C 37 REMARK 465 ILE C 38 REMARK 465 GLU C 39 REMARK 465 THR F 174 REMARK 465 ASN F 209 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 77 OG REMARK 470 LYS B 86 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 12 CD GLU A 12 OE1 0.070 REMARK 500 ASN D 209 C ASN D 209 O 0.137 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 THR D 196 N - CA - C ANGL. DEV. = 24.3 DEGREES REMARK 500 SER D 197 N - CA - CB ANGL. DEV. = 21.4 DEGREES REMARK 500 SER D 197 N - CA - C ANGL. DEV. = -18.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 31 104.45 -59.30 REMARK 500 ASN A 58 44.45 -144.95 REMARK 500 ASN A 61 45.58 -142.13 REMARK 500 PRO A 98 49.96 -79.38 REMARK 500 THR D 196 -73.64 -77.49 REMARK 500 GLU B 39 -73.40 -63.50 REMARK 500 ASN B 58 41.31 -144.84 REMARK 500 ASN B 61 48.13 -144.58 REMARK 500 THR B 67 -170.00 -110.25 REMARK 500 SER B 83 -37.37 -35.68 REMARK 500 PRO B 98 33.18 -78.27 REMARK 500 SER C 32 79.95 50.61 REMARK 500 ASN C 58 44.94 -151.88 REMARK 500 THR C 67 -167.35 -100.21 REMARK 500 ARG C 81 39.47 75.63 REMARK 500 LYS C 108 57.20 -101.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6J07 RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 SEQUENCE OF CHAIN A,B,C WAS BASED ON ISOFORM 1 OF UNP DATABASE REMARK 999 Q3KP22 (MAJIN_HUMAN). DBREF 6J08 A 2 109 UNP Q3KP22 MAJIN_HUMAN 2 109 DBREF 6J08 D 174 209 UNP Q8NHR7 TERB2_HUMAN 174 209 DBREF 6J08 B 2 109 UNP Q3KP22 MAJIN_HUMAN 2 109 DBREF 6J08 E 174 209 UNP Q8NHR7 TERB2_HUMAN 174 209 DBREF 6J08 C 2 109 UNP Q3KP22 MAJIN_HUMAN 2 109 DBREF 6J08 F 174 209 UNP Q8NHR7 TERB2_HUMAN 174 209 SEQADV 6J08 SER A 1 UNP Q3KP22 EXPRESSION TAG SEQADV 6J08 SER B 1 UNP Q3KP22 EXPRESSION TAG SEQADV 6J08 SER C 1 UNP Q3KP22 EXPRESSION TAG SEQRES 1 A 109 SER SER LEU LYS PRO PHE THR TYR PRO PHE PRO GLU THR SEQRES 2 A 109 ARG PHE LEU HIS ALA GLY PRO ASN VAL TYR LYS PHE LYS SEQRES 3 A 109 ILE ARG TYR GLY LYS SER ILE ARG GLY GLU GLU ILE GLU SEQRES 4 A 109 ASN LYS GLU VAL ILE THR GLN GLU LEU GLU ASP SER VAL SEQRES 5 A 109 ARG VAL VAL LEU GLY ASN LEU ASP ASN LEU GLN PRO PHE SEQRES 6 A 109 ALA THR GLU HIS PHE ILE VAL PHE PRO TYR LYS SER LYS SEQRES 7 A 109 TRP GLU ARG VAL SER HIS LEU LYS PHE LYS HIS GLY GLU SEQRES 8 A 109 ILE ILE LEU ILE PRO TYR PRO PHE VAL PHE THR LEU TYR SEQRES 9 A 109 VAL GLU MET LYS TRP SEQRES 1 D 36 THR GLY TYR ILE SER ILE ASP ALA MET LYS LYS PHE LEU SEQRES 2 D 36 GLY GLU LEU HIS ASP PHE ILE PRO GLY THR SER GLY TYR SEQRES 3 D 36 LEU ALA TYR HIS VAL GLN ASN GLU ILE ASN SEQRES 1 B 109 SER SER LEU LYS PRO PHE THR TYR PRO PHE PRO GLU THR SEQRES 2 B 109 ARG PHE LEU HIS ALA GLY PRO ASN VAL TYR LYS PHE LYS SEQRES 3 B 109 ILE ARG TYR GLY LYS SER ILE ARG GLY GLU GLU ILE GLU SEQRES 4 B 109 ASN LYS GLU VAL ILE THR GLN GLU LEU GLU ASP SER VAL SEQRES 5 B 109 ARG VAL VAL LEU GLY ASN LEU ASP ASN LEU GLN PRO PHE SEQRES 6 B 109 ALA THR GLU HIS PHE ILE VAL PHE PRO TYR LYS SER LYS SEQRES 7 B 109 TRP GLU ARG VAL SER HIS LEU LYS PHE LYS HIS GLY GLU SEQRES 8 B 109 ILE ILE LEU ILE PRO TYR PRO PHE VAL PHE THR LEU TYR SEQRES 9 B 109 VAL GLU MET LYS TRP SEQRES 1 E 36 THR GLY TYR ILE SER ILE ASP ALA MET LYS LYS PHE LEU SEQRES 2 E 36 GLY GLU LEU HIS ASP PHE ILE PRO GLY THR SER GLY TYR SEQRES 3 E 36 LEU ALA TYR HIS VAL GLN ASN GLU ILE ASN SEQRES 1 C 109 SER SER LEU LYS PRO PHE THR TYR PRO PHE PRO GLU THR SEQRES 2 C 109 ARG PHE LEU HIS ALA GLY PRO ASN VAL TYR LYS PHE LYS SEQRES 3 C 109 ILE ARG TYR GLY LYS SER ILE ARG GLY GLU GLU ILE GLU SEQRES 4 C 109 ASN LYS GLU VAL ILE THR GLN GLU LEU GLU ASP SER VAL SEQRES 5 C 109 ARG VAL VAL LEU GLY ASN LEU ASP ASN LEU GLN PRO PHE SEQRES 6 C 109 ALA THR GLU HIS PHE ILE VAL PHE PRO TYR LYS SER LYS SEQRES 7 C 109 TRP GLU ARG VAL SER HIS LEU LYS PHE LYS HIS GLY GLU SEQRES 8 C 109 ILE ILE LEU ILE PRO TYR PRO PHE VAL PHE THR LEU TYR SEQRES 9 C 109 VAL GLU MET LYS TRP SEQRES 1 F 36 THR GLY TYR ILE SER ILE ASP ALA MET LYS LYS PHE LEU SEQRES 2 F 36 GLY GLU LEU HIS ASP PHE ILE PRO GLY THR SER GLY TYR SEQRES 3 F 36 LEU ALA TYR HIS VAL GLN ASN GLU ILE ASN HELIX 1 AA1 ASN A 40 GLY A 57 1 18 HELIX 2 AA2 ASP D 180 MET D 182 5 3 HELIX 3 AA3 ASN B 40 GLY B 57 1 18 HELIX 4 AA4 SER E 178 MET E 182 5 5 HELIX 5 AA5 LYS C 41 GLY C 57 1 17 HELIX 6 AA6 SER F 178 MET F 182 5 5 SHEET 1 AA1 7 ILE D 177 SER D 178 0 SHEET 2 AA1 7 PHE A 65 ALA A 66 1 N ALA A 66 O ILE D 177 SHEET 3 AA1 7 PHE A 70 LYS A 78 -1 O VAL A 72 N PHE A 65 SHEET 4 AA1 7 ILE A 92 MET A 107 -1 O VAL A 100 N SER A 77 SHEET 5 AA1 7 ASN A 21 TYR A 29 1 N LYS A 26 O PHE A 101 SHEET 6 AA1 7 GLU A 12 ALA A 18 -1 N GLU A 12 O ILE A 27 SHEET 7 AA1 7 LEU D 189 ASP D 191 -1 O HIS D 190 N HIS A 17 SHEET 1 AA2 6 ILE D 177 SER D 178 0 SHEET 2 AA2 6 PHE A 65 ALA A 66 1 N ALA A 66 O ILE D 177 SHEET 3 AA2 6 PHE A 70 LYS A 78 -1 O VAL A 72 N PHE A 65 SHEET 4 AA2 6 ILE A 92 MET A 107 -1 O VAL A 100 N SER A 77 SHEET 5 AA2 6 LEU A 85 HIS A 89 -1 N HIS A 89 O ILE A 92 SHEET 6 AA2 6 TYR D 199 HIS D 203 -1 O LEU D 200 N LYS A 88 SHEET 1 AA3 6 PHE B 65 ALA B 66 0 SHEET 2 AA3 6 PHE B 70 LYS B 78 -1 O VAL B 72 N PHE B 65 SHEET 3 AA3 6 ILE B 92 MET B 107 -1 O GLU B 106 N ILE B 71 SHEET 4 AA3 6 ASN B 21 TYR B 29 1 N ARG B 28 O VAL B 105 SHEET 5 AA3 6 GLU B 12 ALA B 18 -1 N LEU B 16 O TYR B 23 SHEET 6 AA3 6 LEU E 189 ASP E 191 -1 O HIS E 190 N HIS B 17 SHEET 1 AA4 5 PHE B 65 ALA B 66 0 SHEET 2 AA4 5 PHE B 70 LYS B 78 -1 O VAL B 72 N PHE B 65 SHEET 3 AA4 5 ILE B 92 MET B 107 -1 O GLU B 106 N ILE B 71 SHEET 4 AA4 5 LEU B 85 HIS B 89 -1 N PHE B 87 O LEU B 94 SHEET 5 AA4 5 TYR E 199 HIS E 203 -1 O LEU E 200 N LYS B 88 SHEET 1 AA5 6 PHE C 65 ALA C 66 0 SHEET 2 AA5 6 PHE C 70 LYS C 78 -1 O VAL C 72 N PHE C 65 SHEET 3 AA5 6 ILE C 92 MET C 107 -1 O VAL C 100 N SER C 77 SHEET 4 AA5 6 ASN C 21 TYR C 29 1 N LYS C 26 O PHE C 101 SHEET 5 AA5 6 GLU C 12 ALA C 18 -1 N ARG C 14 O PHE C 25 SHEET 6 AA5 6 HIS F 190 ASP F 191 -1 O HIS F 190 N HIS C 17 SHEET 1 AA6 5 PHE C 65 ALA C 66 0 SHEET 2 AA6 5 PHE C 70 LYS C 78 -1 O VAL C 72 N PHE C 65 SHEET 3 AA6 5 ILE C 92 MET C 107 -1 O VAL C 100 N SER C 77 SHEET 4 AA6 5 LEU C 85 HIS C 89 -1 N HIS C 89 O ILE C 92 SHEET 5 AA6 5 TYR F 199 HIS F 203 -1 O LEU F 200 N LYS C 88 CRYST1 107.737 128.767 86.890 90.00 90.00 90.00 C 2 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009282 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007766 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011509 0.00000