data_6J0I
#
_entry.id 6J0I
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.380
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 6J0I pdb_00006j0i 10.2210/pdb6j0i/pdb
WWPDB D_1300009603 ? ?
#
_pdbx_database_status.status_code REL
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.entry_id 6J0I
_pdbx_database_status.recvd_initial_deposition_date 2018-12-24
_pdbx_database_status.SG_entry N
_pdbx_database_status.deposit_site PDBJ
_pdbx_database_status.process_site PDBJ
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_nmr_data ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
_audit_author.identifier_ORCID
'Satange, R.B.' 1 ?
'Chuang, C.Y.' 2 ?
'Hou, M.H.' 3 ?
#
_citation.abstract ?
_citation.abstract_id_CAS ?
_citation.book_id_ISBN ?
_citation.book_publisher ?
_citation.book_publisher_city ?
_citation.book_title ?
_citation.coordinate_linkage ?
_citation.country UK
_citation.database_id_Medline ?
_citation.details ?
_citation.id primary
_citation.journal_abbrev 'Nucleic Acids Res.'
_citation.journal_id_ASTM NARHAD
_citation.journal_id_CSD 0389
_citation.journal_id_ISSN 1362-4962
_citation.journal_full ?
_citation.journal_issue ?
_citation.journal_volume 47
_citation.language ?
_citation.page_first 8899
_citation.page_last 8912
_citation.title
'Polymorphic G:G mismatches act as hotspots for inducing right-handed Z DNA by DNA intercalation.'
_citation.year 2019
_citation.database_id_CSD ?
_citation.pdbx_database_id_DOI 10.1093/nar/gkz653
_citation.pdbx_database_id_PubMed 31361900
_citation.unpublished_flag ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Satange, R.' 1 ?
primary 'Chuang, C.Y.' 2 ?
primary 'Neidle, S.' 3 ?
primary 'Hou, M.H.' 4 ?
#
_cell.angle_alpha 90.000
_cell.angle_alpha_esd ?
_cell.angle_beta 90.000
_cell.angle_beta_esd ?
_cell.angle_gamma 90.000
_cell.angle_gamma_esd ?
_cell.entry_id 6J0I
_cell.details ?
_cell.formula_units_Z ?
_cell.length_a 47.826
_cell.length_a_esd ?
_cell.length_b 48.096
_cell.length_b_esd ?
_cell.length_c 96.725
_cell.length_c_esd ?
_cell.volume ?
_cell.volume_esd ?
_cell.Z_PDB 24
_cell.reciprocal_angle_alpha ?
_cell.reciprocal_angle_beta ?
_cell.reciprocal_angle_gamma ?
_cell.reciprocal_angle_alpha_esd ?
_cell.reciprocal_angle_beta_esd ?
_cell.reciprocal_angle_gamma_esd ?
_cell.reciprocal_length_a ?
_cell.reciprocal_length_b ?
_cell.reciprocal_length_c ?
_cell.reciprocal_length_a_esd ?
_cell.reciprocal_length_b_esd ?
_cell.reciprocal_length_c_esd ?
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 6J0I
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 17
_symmetry.space_group_name_Hall ?
_symmetry.space_group_name_H-M 'P 2 2 21'
_symmetry.pdbx_full_space_group_name_H-M ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn
;DNA (5'-D(*TP*TP*GP*GP*CP*GP*AP*A)-3')
;
2466.641 6 ? ? ? ?
2 branched man
'2,6-dideoxy-4-O-methyl-alpha-D-galactopyranose-(1-3)-(2R,3R,6R)-6-hydroxy-2-methyltetrahydro-2H-pyran-3-yl acetate' 318.363 6
? ? ? ?
3 branched man
;3-C-methyl-4-O-acetyl-alpha-L-Olivopyranose-(1-3)-(2R,5S,6R)-6-methyltetrahydro-2H-pyran-2,5-diol-(1-3)-(2R,5S,6R)-6-methyltetrahydro-2H-pyran-2,5-diol
;
432.506 6 ? ? ? ?
4 non-polymer man '1,2-HYDRO-1-OXY-3,4-HYDRO-3-(1-METHOXY-2-OXY-3,4-DIHYDROXYPENTYL)-8,9-DIHYROXY-7-METHYLANTHRACENE' 388.411 6
? ? ? ?
5 non-polymer man 'COBALT (II) ION' 58.933 7 ? ? ? ?
6 water nat water 18.015 381 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type polydeoxyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code '(DT)(DT)(DG)(DG)(DC)(DG)(DA)(DA)'
_entity_poly.pdbx_seq_one_letter_code_can TTGGCGAA
_entity_poly.pdbx_strand_id A,B,C,D,E,F
_entity_poly.pdbx_target_identifier ?
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 DT n
1 2 DT n
1 3 DG n
1 4 DG n
1 5 DC n
1 6 DG n
1 7 DA n
1 8 DA n
#
_pdbx_entity_src_syn.entity_id 1
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num 1
_pdbx_entity_src_syn.pdbx_end_seq_num 8
_pdbx_entity_src_syn.organism_scientific 'synthetic construct'
_pdbx_entity_src_syn.organism_common_name ?
_pdbx_entity_src_syn.ncbi_taxonomy_id 32630
_pdbx_entity_src_syn.details ?
#
_struct_ref.id 1
_struct_ref.db_name PDB
_struct_ref.db_code 6J0I
_struct_ref.pdbx_db_accession 6J0I
_struct_ref.pdbx_db_isoform ?
_struct_ref.entity_id 1
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_align_begin 1
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.pdbx_PDB_id_code
_struct_ref_seq.pdbx_strand_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.pdbx_seq_align_beg_ins_code
_struct_ref_seq.seq_align_end
_struct_ref_seq.pdbx_seq_align_end_ins_code
_struct_ref_seq.pdbx_db_accession
_struct_ref_seq.db_align_beg
_struct_ref_seq.pdbx_db_align_beg_ins_code
_struct_ref_seq.db_align_end
_struct_ref_seq.pdbx_db_align_end_ins_code
_struct_ref_seq.pdbx_auth_seq_align_beg
_struct_ref_seq.pdbx_auth_seq_align_end
1 1 6J0I A 1 ? 8 ? 6J0I 1 ? 8 ? 1 8
2 1 6J0I B 1 ? 8 ? 6J0I 9 ? 16 ? 9 16
3 1 6J0I C 1 ? 8 ? 6J0I 1 ? 8 ? 1 8
4 1 6J0I D 1 ? 8 ? 6J0I 9 ? 16 ? 9 16
5 1 6J0I E 1 ? 8 ? 6J0I 1 ? 8 ? 1 8
6 1 6J0I F 1 ? 8 ? 6J0I 9 ? 16 ? 9 16
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
1GL 'D-saccharide, alpha linking' . 2,6-dideoxy-4-O-methyl-alpha-D-galactopyranose
;4-O-METHYL-2,6-DIDEOXY-ALPHA-D-GALACTO-HEXOPYRANOSE; 2-deoxy-4-O-methyl-alpha-D-fucopyranose; 2,6-dideoxy-4-O-methyl-alpha-D-galactose; 2,6-dideoxy-4-O-methyl-D-galactose; 2,6-dideoxy-4-O-methyl-galactose
;
'C7 H14 O4' 162.184
ARI 'D-saccharide, beta linking' . '(2R,3R,6R)-6-hydroxy-2-methyltetrahydro-2H-pyran-3-yl acetate'
'[O4]-ACETOXY-2,3-DIDEOXYFUCOSE' 'C8 H14 O4' 174.194
CDR 'D-saccharide, beta linking' . '(2R,5S,6R)-6-methyltetrahydro-2H-pyran-2,5-diol' 2,3-DIDEOXYFUCOSE 'C6 H12 O3' 132.158
CO non-polymer . 'COBALT (II) ION' ? 'Co 2' 58.933
CRH non-polymer .
'1,2-HYDRO-1-OXY-3,4-HYDRO-3-(1-METHOXY-2-OXY-3,4-DIHYDROXYPENTYL)-8,9-DIHYROXY-7-METHYLANTHRACENE' ? 'C21 H24 O7' 388.411
DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222
DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221
DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208
ERI 'L-saccharide, alpha linking' n 3-C-methyl-4-O-acetyl-alpha-L-Olivopyranose
;4-O-ACETYL-2,6-DIDEOXY-3-C-METHYL-BETA-L-ARABINO-HEXOPYRANOSE; 3-C-methyl-4-O-acetyl-alpha-L-Olivose; 3-C-methyl-4-O-acetyl-L-Olivose; 3-C-methyl-4-O-acetyl-Olivose
;
'C9 H16 O5' 204.220
HOH non-polymer . WATER ? 'H2 O' 18.015
#
_exptl.absorpt_coefficient_mu ?
_exptl.absorpt_correction_T_max ?
_exptl.absorpt_correction_T_min ?
_exptl.absorpt_correction_type ?
_exptl.absorpt_process_details ?
_exptl.entry_id 6J0I
_exptl.crystals_number 1
_exptl.details ?
_exptl.method 'X-RAY DIFFRACTION'
_exptl.method_details ?
#
_exptl_crystal.colour ?
_exptl_crystal.density_diffrn ?
_exptl_crystal.density_Matthews 3.76
_exptl_crystal.density_method ?
_exptl_crystal.density_percent_sol 67.27
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.id 1
_exptl_crystal.preparation ?
_exptl_crystal.size_max ?
_exptl_crystal.size_mid ?
_exptl_crystal.size_min ?
_exptl_crystal.size_rad ?
_exptl_crystal.colour_lustre ?
_exptl_crystal.colour_modifier ?
_exptl_crystal.colour_primary ?
_exptl_crystal.density_meas ?
_exptl_crystal.density_meas_esd ?
_exptl_crystal.density_meas_gt ?
_exptl_crystal.density_meas_lt ?
_exptl_crystal.density_meas_temp ?
_exptl_crystal.density_meas_temp_esd ?
_exptl_crystal.density_meas_temp_gt ?
_exptl_crystal.density_meas_temp_lt ?
_exptl_crystal.pdbx_crystal_image_url ?
_exptl_crystal.pdbx_crystal_image_format ?
_exptl_crystal.pdbx_mosaicity ?
_exptl_crystal.pdbx_mosaicity_esd ?
#
_exptl_crystal_grow.apparatus ?
_exptl_crystal_grow.atmosphere ?
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.details ?
_exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP'
_exptl_crystal_grow.method_ref ?
_exptl_crystal_grow.pH 7.3
_exptl_crystal_grow.pressure ?
_exptl_crystal_grow.pressure_esd ?
_exptl_crystal_grow.seeding ?
_exptl_crystal_grow.seeding_ref ?
_exptl_crystal_grow.temp 277.15
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.temp_esd ?
_exptl_crystal_grow.time ?
_exptl_crystal_grow.pdbx_details '5mM Sodium Cacodylate (pH 7.3), 7mM MgCl2, 12mM Spermine, 4% PEG 400, 4% 1-propanol'
_exptl_crystal_grow.pdbx_pH_range ?
#
_diffrn.ambient_environment ?
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.ambient_temp_esd ?
_diffrn.crystal_id 1
_diffrn.crystal_support ?
_diffrn.crystal_treatment ?
_diffrn.details ?
_diffrn.id 1
_diffrn.ambient_pressure ?
_diffrn.ambient_pressure_esd ?
_diffrn.ambient_pressure_gt ?
_diffrn.ambient_pressure_lt ?
_diffrn.ambient_temp_gt ?
_diffrn.ambient_temp_lt ?
_diffrn.pdbx_serial_crystal_experiment N
#
_diffrn_detector.details ?
_diffrn_detector.detector CCD
_diffrn_detector.diffrn_id 1
_diffrn_detector.type 'Bruker DIP-6040'
_diffrn_detector.area_resol_mean ?
_diffrn_detector.dtime ?
_diffrn_detector.pdbx_frames_total ?
_diffrn_detector.pdbx_collection_time_total ?
_diffrn_detector.pdbx_collection_date 2014-11-12
_diffrn_detector.pdbx_frequency ?
#
_diffrn_radiation.collimation ?
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.filter_edge ?
_diffrn_radiation.inhomogeneity ?
_diffrn_radiation.monochromator ?
_diffrn_radiation.polarisn_norm ?
_diffrn_radiation.polarisn_ratio ?
_diffrn_radiation.probe ?
_diffrn_radiation.type ?
_diffrn_radiation.xray_symbol ?
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.pdbx_wavelength_list ?
_diffrn_radiation.pdbx_wavelength ?
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_analyzer ?
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 0.90000
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.current ?
_diffrn_source.details ?
_diffrn_source.diffrn_id 1
_diffrn_source.power ?
_diffrn_source.size ?
_diffrn_source.source SYNCHROTRON
_diffrn_source.target ?
_diffrn_source.type 'SPRING-8 BEAMLINE BL44XU'
_diffrn_source.voltage ?
_diffrn_source.take-off_angle ?
_diffrn_source.pdbx_wavelength_list 0.90000
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_synchrotron_beamline BL44XU
_diffrn_source.pdbx_synchrotron_site SPring-8
#
_reflns.B_iso_Wilson_estimate 39.790
_reflns.entry_id 6J0I
_reflns.data_reduction_details ?
_reflns.data_reduction_method ?
_reflns.d_resolution_high 2.500
_reflns.d_resolution_low 20.000
_reflns.details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.number_all ?
_reflns.number_obs 12624
_reflns.observed_criterion ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.observed_criterion_I_max ?
_reflns.observed_criterion_I_min ?
_reflns.observed_criterion_sigma_F ?
_reflns.observed_criterion_sigma_I ?
_reflns.percent_possible_obs 95.500
_reflns.R_free_details ?
_reflns.Rmerge_F_all ?
_reflns.Rmerge_F_obs ?
_reflns.Friedel_coverage ?
_reflns.number_gt ?
_reflns.threshold_expression ?
_reflns.pdbx_redundancy 6.800
_reflns.pdbx_Rmerge_I_obs 0.043
_reflns.pdbx_Rmerge_I_all ?
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_av_sigmaI ?
_reflns.pdbx_netI_over_sigmaI 21.700
_reflns.pdbx_res_netI_over_av_sigmaI_2 ?
_reflns.pdbx_res_netI_over_sigmaI_2 ?
_reflns.pdbx_chi_squared 0.914
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_d_res_high_opt ?
_reflns.pdbx_d_res_low_opt ?
_reflns.pdbx_d_res_opt_method ?
_reflns.phase_calculation_details ?
_reflns.pdbx_Rrim_I_all 0.047
_reflns.pdbx_Rpim_I_all 0.019
_reflns.pdbx_d_opt ?
_reflns.pdbx_number_measured_all 53369
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
_reflns.pdbx_CC_half ?
_reflns.pdbx_R_split ?
#
_reflns_shell.d_res_high 2.500
_reflns_shell.d_res_low 2.590
_reflns_shell.meanI_over_sigI_all ?
_reflns_shell.meanI_over_sigI_obs ?
_reflns_shell.number_measured_all ?
_reflns_shell.number_measured_obs ?
_reflns_shell.number_possible ?
_reflns_shell.number_unique_all ?
_reflns_shell.number_unique_obs 549
_reflns_shell.percent_possible_all 100.000
_reflns_shell.percent_possible_obs ?
_reflns_shell.Rmerge_F_all ?
_reflns_shell.Rmerge_F_obs ?
_reflns_shell.Rmerge_I_all ?
_reflns_shell.Rmerge_I_obs 0.512
_reflns_shell.meanI_over_sigI_gt ?
_reflns_shell.meanI_over_uI_all ?
_reflns_shell.meanI_over_uI_gt ?
_reflns_shell.number_measured_gt ?
_reflns_shell.number_unique_gt ?
_reflns_shell.percent_possible_gt ?
_reflns_shell.Rmerge_F_gt ?
_reflns_shell.Rmerge_I_gt ?
_reflns_shell.pdbx_redundancy 7.200
_reflns_shell.pdbx_Rsym_value ?
_reflns_shell.pdbx_chi_squared 0.786
_reflns_shell.pdbx_netI_over_sigmaI_all ?
_reflns_shell.pdbx_netI_over_sigmaI_obs ?
_reflns_shell.pdbx_Rrim_I_all 0.037
_reflns_shell.pdbx_Rpim_I_all 0.017
_reflns_shell.pdbx_rejects ?
_reflns_shell.pdbx_ordinal 1
_reflns_shell.pdbx_diffrn_id 1
_reflns_shell.pdbx_CC_half 0.996
_reflns_shell.pdbx_R_split ?
#
_refine.aniso_B[1][1] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[2][3] ?
_refine.aniso_B[3][3] ?
_refine.B_iso_max 62.000
_refine.B_iso_mean 39.4200
_refine.B_iso_min 14.330
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.details ?
_refine.diff_density_max ?
_refine.diff_density_max_esd ?
_refine.diff_density_min ?
_refine.diff_density_min_esd ?
_refine.diff_density_rms ?
_refine.diff_density_rms_esd ?
_refine.entry_id 6J0I
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.ls_abs_structure_details ?
_refine.ls_abs_structure_Flack ?
_refine.ls_abs_structure_Flack_esd ?
_refine.ls_abs_structure_Rogers ?
_refine.ls_abs_structure_Rogers_esd ?
_refine.ls_d_res_high 2.5000
_refine.ls_d_res_low 16.1200
_refine.ls_extinction_coef ?
_refine.ls_extinction_coef_esd ?
_refine.ls_extinction_expression ?
_refine.ls_extinction_method ?
_refine.ls_goodness_of_fit_all ?
_refine.ls_goodness_of_fit_all_esd ?
_refine.ls_goodness_of_fit_obs ?
_refine.ls_goodness_of_fit_obs_esd ?
_refine.ls_hydrogen_treatment ?
_refine.ls_matrix_type ?
_refine.ls_number_constraints ?
_refine.ls_number_parameters ?
_refine.ls_number_reflns_all ?
_refine.ls_number_reflns_obs 12624
_refine.ls_number_reflns_R_free 621
_refine.ls_number_reflns_R_work ?
_refine.ls_number_restraints ?
_refine.ls_percent_reflns_obs 84.4000
_refine.ls_percent_reflns_R_free 4.9200
_refine.ls_R_factor_all ?
_refine.ls_R_factor_obs 0.2590
_refine.ls_R_factor_R_free 0.2900
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_R_factor_R_work 0.2570
_refine.ls_R_Fsqd_factor_obs ?
_refine.ls_R_I_factor_obs ?
_refine.ls_redundancy_reflns_all ?
_refine.ls_redundancy_reflns_obs ?
_refine.ls_restrained_S_all ?
_refine.ls_restrained_S_obs ?
_refine.ls_shift_over_esd_max ?
_refine.ls_shift_over_esd_mean ?
_refine.ls_structure_factor_coef ?
_refine.ls_weighting_details ?
_refine.ls_weighting_scheme ?
_refine.ls_wR_factor_all ?
_refine.ls_wR_factor_obs ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.occupancy_max ?
_refine.occupancy_min ?
_refine.solvent_model_details ?
_refine.solvent_model_param_bsol ?
_refine.solvent_model_param_ksol ?
_refine.ls_R_factor_gt ?
_refine.ls_goodness_of_fit_gt ?
_refine.ls_goodness_of_fit_ref ?
_refine.ls_shift_over_su_max ?
_refine.ls_shift_over_su_max_lt ?
_refine.ls_shift_over_su_mean ?
_refine.ls_shift_over_su_mean_lt ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 1.350
_refine.pdbx_ls_sigma_Fsqd ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_starting_model 1VAQ
_refine.pdbx_stereochemistry_target_values ?
_refine.pdbx_R_Free_selection_details ?
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.pdbx_solvent_vdw_probe_radii 1.1100
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii 0.9000
_refine.pdbx_real_space_R ?
_refine.pdbx_density_correlation ?
_refine.pdbx_pd_number_of_powder_patterns ?
_refine.pdbx_pd_number_of_points ?
_refine.pdbx_pd_meas_number_of_points ?
_refine.pdbx_pd_proc_ls_prof_R_factor ?
_refine.pdbx_pd_proc_ls_prof_wR_factor ?
_refine.pdbx_pd_Marquardt_correlation_coeff ?
_refine.pdbx_pd_Fsqrd_R_factor ?
_refine.pdbx_pd_ls_matrix_band_width ?
_refine.pdbx_overall_phase_error 31.7900
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_diffrn_id 1
_refine.overall_SU_B ?
_refine.overall_SU_ML 0.4600
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_average_fsc_overall ?
_refine.pdbx_average_fsc_work ?
_refine.pdbx_average_fsc_free ?
#
_refine_hist.cycle_id final
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.d_res_high 2.5000
_refine_hist.d_res_low 16.1200
_refine_hist.pdbx_number_atoms_ligand 505
_refine_hist.number_atoms_solvent 384
_refine_hist.number_atoms_total 1873
_refine_hist.pdbx_number_residues_total 48
_refine_hist.pdbx_B_iso_mean_ligand 43.02
_refine_hist.pdbx_B_iso_mean_solvent 34.69
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 984
#
loop_
_refine_ls_shell.pdbx_refine_id
_refine_ls_shell.d_res_high
_refine_ls_shell.d_res_low
_refine_ls_shell.number_reflns_all
_refine_ls_shell.number_reflns_obs
_refine_ls_shell.number_reflns_R_free
_refine_ls_shell.number_reflns_R_work
_refine_ls_shell.percent_reflns_obs
_refine_ls_shell.percent_reflns_R_free
_refine_ls_shell.R_factor_all
_refine_ls_shell.R_factor_obs
_refine_ls_shell.R_factor_R_free
_refine_ls_shell.R_factor_R_free_error
_refine_ls_shell.R_factor_R_work
_refine_ls_shell.redundancy_reflns_all
_refine_ls_shell.redundancy_reflns_obs
_refine_ls_shell.wR_factor_all
_refine_ls_shell.wR_factor_obs
_refine_ls_shell.wR_factor_R_free
_refine_ls_shell.wR_factor_R_work
_refine_ls_shell.pdbx_total_number_of_bins_used
_refine_ls_shell.pdbx_phase_error
_refine_ls_shell.pdbx_fsc_work
_refine_ls_shell.pdbx_fsc_free
'X-RAY DIFFRACTION' 2.4960 2.7460 2187 . 107 2080 59.0000 . . . 0.4849 0.0000 0.3829 . . . . . . 4 . . .
'X-RAY DIFFRACTION' 2.7460 3.1408 3609 . 187 3422 96.0000 . . . 0.3566 0.0000 0.3140 . . . . . . 4 . . .
'X-RAY DIFFRACTION' 3.1408 3.9475 3744 . 177 3567 100.0000 . . . 0.2931 0.0000 0.2374 . . . . . . 4 . . .
'X-RAY DIFFRACTION' 3.9475 16.1212 3084 . 150 2934 82.0000 . . . 0.2206 0.0000 0.2250 . . . . . . 4 . . .
#
_struct.entry_id 6J0I
_struct.title 'Structure of [Co2+-(Chromomycin A3)2]-d(TTGGCGAA)2 complex'
_struct.pdbx_model_details ?
_struct.pdbx_formula_weight ?
_struct.pdbx_formula_weight_method ?
_struct.pdbx_model_type_details ?
_struct.pdbx_CASP_flag N
#
_struct_keywords.entry_id 6J0I
_struct_keywords.text 'Mismatch DNA, Chromomycin A3, Drug-DNA complex, G:G mismatch, DNA-ANTIBIOTIC complex'
_struct_keywords.pdbx_keywords DNA/ANTIBIOTIC
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 1 ?
C N N 1 ?
D N N 1 ?
E N N 1 ?
F N N 1 ?
G N N 2 ?
H N N 3 ?
I N N 3 ?
J N N 2 ?
K N N 2 ?
L N N 3 ?
M N N 3 ?
N N N 2 ?
O N N 2 ?
P N N 3 ?
Q N N 3 ?
R N N 2 ?
S N N 4 ?
T N N 5 ?
U N N 5 ?
V N N 4 ?
W N N 4 ?
X N N 5 ?
Y N N 5 ?
Z N N 4 ?
AA N N 5 ?
BA N N 4 ?
CA N N 5 ?
DA N N 4 ?
EA N N 5 ?
FA N N 6 ?
GA N N 6 ?
HA N N 6 ?
IA N N 6 ?
JA N N 6 ?
KA N N 6 ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
covale1 covale one ? S CRH . C6 ? ? ? 1_555 G ARI . O1 ? ? A CRH 103 G ARI 1 1_555 ? ? ? ? ? ? ? 1.231
? ?
covale2 covale one ? S CRH . C2 ? ? ? 1_555 H CDR . O1 ? ? A CRH 103 H CDR 1 1_555 ? ? ? ? ? ? ? 1.481
? ?
covale3 covale one ? V CRH . C2 ? ? ? 1_555 I CDR . O1 ? ? B CRH 103 I CDR 1 1_555 ? ? ? ? ? ? ? 1.423
? ?
covale4 covale one ? V CRH . C6 ? ? ? 1_555 J ARI . O1 ? ? B CRH 103 J ARI 1 1_555 ? ? ? ? ? ? ? 1.343
? ?
covale5 covale one ? W CRH . C6 ? ? ? 1_555 K ARI . O1 ? ? C CRH 103 K ARI 1 1_555 ? ? ? ? ? ? ? 1.339
? ?
covale6 covale one ? W CRH . C2 ? ? ? 1_555 L CDR . O1 ? ? C CRH 103 L CDR 1 1_555 ? ? ? ? ? ? ? 1.441
? ?
covale7 covale one ? Z CRH . C2 ? ? ? 1_555 M CDR . O1 ? ? D CRH 103 M CDR 1 1_555 ? ? ? ? ? ? ? 1.472
? ?
covale8 covale one ? Z CRH . C6 ? ? ? 1_555 N ARI . O1 ? ? D CRH 103 N ARI 1 1_555 ? ? ? ? ? ? ? 1.346
? ?
covale9 covale one ? BA CRH . C6 ? ? ? 1_555 O ARI . O1 ? ? E CRH 103 O ARI 1 1_555 ? ? ? ? ? ? ? 1.374
? ?
covale10 covale one ? BA CRH . C2 ? ? ? 1_555 P CDR . O1 ? ? E CRH 103 P CDR 1 1_555 ? ? ? ? ? ? ? 1.381
? ?
covale11 covale one ? DA CRH . C2 ? ? ? 1_555 Q CDR . O1 ? ? F CRH 103 Q CDR 1 1_555 ? ? ? ? ? ? ? 1.449
? ?
covale12 covale one ? DA CRH . C6 ? ? ? 1_555 R ARI . O1 ? ? F CRH 103 R ARI 1 1_555 ? ? ? ? ? ? ? 1.486
? ?
covale13 covale one ? G ARI . C3 ? ? ? 1_555 G 1GL . O1 ? ? G ARI 1 G 1GL 2 1_555 ? ? ? ? ? ? ? 1.506
? ?
covale14 covale one ? H CDR . C3 ? ? ? 1_555 H CDR . O1 ? ? H CDR 1 H CDR 2 1_555 ? ? ? ? ? ? ? 1.379
? ?
covale15 covale one ? H CDR . C3 ? ? ? 1_555 H ERI . O1 ? ? H CDR 2 H ERI 3 1_555 ? ? ? ? ? ? ? 1.446
? ?
covale16 covale one ? I CDR . C3 ? ? ? 1_555 I CDR . O1 ? ? I CDR 1 I CDR 2 1_555 ? ? ? ? ? ? ? 1.374
? ?
covale17 covale one ? I CDR . C3 ? ? ? 1_555 I ERI . O1 ? ? I CDR 2 I ERI 3 1_555 ? ? ? ? ? ? ? 1.337
? ?
covale18 covale one ? J ARI . C3 ? ? ? 1_555 J 1GL . O1 ? ? J ARI 1 J 1GL 2 1_555 ? ? ? ? ? ? ? 1.458
? ?
covale19 covale one ? K ARI . C3 ? ? ? 1_555 K 1GL . O1 ? ? K ARI 1 K 1GL 2 1_555 ? ? ? ? ? ? ? 1.495
? ?
covale20 covale one ? L CDR . C3 ? ? ? 1_555 L CDR . O1 ? ? L CDR 1 L CDR 2 1_555 ? ? ? ? ? ? ? 1.375
? ?
covale21 covale one ? L CDR . C3 ? ? ? 1_555 L ERI . O1 ? ? L CDR 2 L ERI 3 1_555 ? ? ? ? ? ? ? 1.393
? ?
covale22 covale one ? M CDR . C3 ? ? ? 1_555 M CDR . O1 ? ? M CDR 1 M CDR 2 1_555 ? ? ? ? ? ? ? 1.374
? ?
covale23 covale one ? M CDR . C3 ? ? ? 1_555 M ERI . O1 ? ? M CDR 2 M ERI 3 1_555 ? ? ? ? ? ? ? 1.528
? ?
covale24 covale one ? N ARI . C3 ? ? ? 1_555 N 1GL . O1 ? ? N ARI 1 N 1GL 2 1_555 ? ? ? ? ? ? ? 1.473
? ?
covale25 covale one ? O ARI . C3 ? ? ? 1_555 O 1GL . O1 ? ? O ARI 1 O 1GL 2 1_555 ? ? ? ? ? ? ? 1.530
? ?
covale26 covale one ? P CDR . C3 ? ? ? 1_555 P CDR . O1 ? ? P CDR 1 P CDR 2 1_555 ? ? ? ? ? ? ? 1.371
? ?
covale27 covale one ? P CDR . C3 ? ? ? 1_555 P ERI . O1 ? ? P CDR 2 P ERI 3 1_555 ? ? ? ? ? ? ? 1.272
? ?
covale28 covale one ? Q CDR . C3 ? ? ? 1_555 Q CDR . O1 ? ? Q CDR 1 Q CDR 2 1_555 ? ? ? ? ? ? ? 1.374
? ?
covale29 covale one ? Q CDR . C3 ? ? ? 1_555 Q ERI . O1 ? ? Q CDR 2 Q ERI 3 1_555 ? ? ? ? ? ? ? 1.378
? ?
covale30 covale one ? R ARI . C3 ? ? ? 1_555 R 1GL . O1 ? ? R ARI 1 R 1GL 2 1_555 ? ? ? ? ? ? ? 1.492
? ?
metalc1 metalc ? ? A DG 4 N7 ? ? ? 1_555 U CO . CO ? ? A DG 4 A CO 111 1_555 ? ? ? ? ? ? ? 2.393
? ?
metalc2 metalc ? ? S CRH . O1 ? ? ? 1_555 T CO . CO ? ? A CRH 103 A CO 110 1_555 ? ? ? ? ? ? ? 2.208
? ?
metalc3 metalc ? ? S CRH . O9 ? ? ? 1_555 T CO . CO ? ? A CRH 103 A CO 110 1_555 ? ? ? ? ? ? ? 2.059
? ?
metalc4 metalc ? ? T CO . CO ? ? ? 1_555 V CRH . O1 ? ? A CO 110 B CRH 103 1_555 ? ? ? ? ? ? ? 2.525
? ?
metalc5 metalc ? ? T CO . CO ? ? ? 1_555 V CRH . O9 ? ? A CO 110 B CRH 103 1_555 ? ? ? ? ? ? ? 1.895
? ?
metalc6 metalc ? ? U CO . CO ? ? ? 1_555 FA HOH . O ? ? A CO 111 A HOH 210 1_555 ? ? ? ? ? ? ? 2.527
? ?
metalc7 metalc ? ? C DG 3 N7 ? ? ? 1_555 Y CO . CO ? ? C DG 3 C CO 111 1_555 ? ? ? ? ? ? ? 2.796
? ?
metalc8 metalc ? ? W CRH . O1 ? ? ? 1_555 X CO . CO ? ? C CRH 103 C CO 110 1_555 ? ? ? ? ? ? ? 2.088
? ?
metalc9 metalc ? ? W CRH . O9 ? ? ? 1_555 X CO . CO ? ? C CRH 103 C CO 110 1_555 ? ? ? ? ? ? ? 2.290
? ?
metalc10 metalc ? ? X CO . CO ? ? ? 1_555 Z CRH . O1 ? ? C CO 110 D CRH 103 1_555 ? ? ? ? ? ? ? 2.310
? ?
metalc11 metalc ? ? X CO . CO ? ? ? 1_555 Z CRH . O9 ? ? C CO 110 D CRH 103 1_555 ? ? ? ? ? ? ? 1.942
? ?
metalc12 metalc ? ? Y CO . CO ? ? ? 1_555 HA HOH . O ? ? C CO 111 C HOH 205 1_555 ? ? ? ? ? ? ? 2.185
? ?
metalc13 metalc ? ? Y CO . CO ? ? ? 1_555 HA HOH . O ? ? C CO 111 C HOH 216 1_555 ? ? ? ? ? ? ? 2.190
? ?
metalc14 metalc ? ? Y CO . CO ? ? ? 1_555 IA HOH . O ? ? C CO 111 D HOH 210 4_545 ? ? ? ? ? ? ? 2.258
? ?
metalc15 metalc ? ? Y CO . CO ? ? ? 1_555 IA HOH . O ? ? C CO 111 D HOH 228 4_545 ? ? ? ? ? ? ? 2.253
? ?
metalc16 metalc ? ? D DG 4 N7 ? ? ? 1_555 AA CO . CO ? ? D DG 12 D CO 104 1_555 ? ? ? ? ? ? ? 2.289
? ?
metalc17 metalc ? ? BA CRH . O1 ? ? ? 1_555 CA CO . CO ? ? E CRH 103 E CO 110 1_555 ? ? ? ? ? ? ? 2.039
? ?
metalc18 metalc ? ? BA CRH . O9 ? ? ? 1_555 CA CO . CO ? ? E CRH 103 E CO 110 1_555 ? ? ? ? ? ? ? 2.048
? ?
metalc19 metalc ? ? CA CO . CO ? ? ? 1_555 DA CRH . O1 ? ? E CO 110 F CRH 103 1_555 ? ? ? ? ? ? ? 2.350
? ?
metalc20 metalc ? ? CA CO . CO ? ? ? 1_555 DA CRH . O9 ? ? E CO 110 F CRH 103 1_555 ? ? ? ? ? ? ? 2.104
? ?
metalc21 metalc ? ? F DG 4 N7 ? ? ? 1_555 EA CO . CO ? ? F DG 12 F CO 104 1_555 ? ? ? ? ? ? ? 2.475
? ?
metalc22 metalc ? ? EA CO . CO ? ? ? 1_555 KA HOH . O ? ? F CO 104 F HOH 214 1_555 ? ? ? ? ? ? ? 2.414
? ?
metalc23 metalc ? ? EA CO . CO ? ? ? 1_555 KA HOH . O ? ? F CO 104 F HOH 227 1_555 ? ? ? ? ? ? ? 2.766
? ?
metalc24 metalc ? ? EA CO . CO ? ? ? 1_555 KA HOH . O ? ? F CO 104 F HOH 247 1_555 ? ? ? ? ? ? ? 2.541
? ?
hydrog1 hydrog ? ? A DT 1 N3 ? ? ? 1_555 B DA 8 N1 ? ? A DT 1 B DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog2 hydrog ? ? A DT 1 O4 ? ? ? 1_555 B DA 8 N6 ? ? A DT 1 B DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog3 hydrog ? ? A DT 2 N3 ? ? ? 1_555 B DA 7 N1 ? ? A DT 2 B DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog4 hydrog ? ? A DT 2 O4 ? ? ? 1_555 B DA 7 N6 ? ? A DT 2 B DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog5 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 5 O2 ? ? A DG 4 B DC 13 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ?
? ?
hydrog6 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 5 N3 ? ? A DG 4 B DC 13 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ?
? ?
hydrog7 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DG 4 N1 ? ? A DC 5 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog8 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DG 4 O6 ? ? A DC 5 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog9 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DG 4 N2 ? ? A DC 5 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog10 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DG 3 O6 ? ? A DG 6 B DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ?
? ?
hydrog11 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DG 3 N7 ? ? A DG 6 B DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ?
? ?
hydrog12 hydrog ? ? A DA 7 N1 ? ? ? 1_555 B DT 2 N3 ? ? A DA 7 B DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog13 hydrog ? ? A DA 7 N6 ? ? ? 1_555 B DT 2 O4 ? ? A DA 7 B DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog14 hydrog ? ? A DA 8 N1 ? ? ? 1_555 B DT 1 N3 ? ? A DA 8 B DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog15 hydrog ? ? A DA 8 N6 ? ? ? 1_555 B DT 1 O4 ? ? A DA 8 B DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog16 hydrog ? ? C DT 1 N3 ? ? ? 1_555 D DA 8 N1 ? ? C DT 1 D DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog17 hydrog ? ? C DT 1 O4 ? ? ? 1_555 D DA 8 N6 ? ? C DT 1 D DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog18 hydrog ? ? C DT 2 N3 ? ? ? 1_555 D DA 7 N1 ? ? C DT 2 D DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog19 hydrog ? ? C DT 2 O4 ? ? ? 1_555 D DA 7 N6 ? ? C DT 2 D DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog20 hydrog ? ? C DG 3 N1 ? ? ? 1_555 D DG 6 O6 ? ? C DG 3 D DG 14 1_555 ? ? ? ? ? ? 'DG-DG MISPAIR' ?
? ?
hydrog21 hydrog ? ? C DG 4 N1 ? ? ? 1_555 D DC 5 N3 ? ? C DG 4 D DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog22 hydrog ? ? C DG 4 N2 ? ? ? 1_555 D DC 5 O2 ? ? C DG 4 D DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog23 hydrog ? ? C DG 4 O6 ? ? ? 1_555 D DC 5 N4 ? ? C DG 4 D DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog24 hydrog ? ? C DC 5 N3 ? ? ? 1_555 D DG 4 N1 ? ? C DC 5 D DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog25 hydrog ? ? C DC 5 N4 ? ? ? 1_555 D DG 4 O6 ? ? C DC 5 D DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog26 hydrog ? ? C DC 5 O2 ? ? ? 1_555 D DG 4 N2 ? ? C DC 5 D DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog27 hydrog ? ? C DG 6 N1 ? ? ? 1_555 D DG 3 O6 ? ? C DG 6 D DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ?
? ?
hydrog28 hydrog ? ? C DG 6 N2 ? ? ? 1_555 D DG 3 N7 ? ? C DG 6 D DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ?
? ?
hydrog29 hydrog ? ? C DA 7 N1 ? ? ? 1_555 D DT 2 N3 ? ? C DA 7 D DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog30 hydrog ? ? C DA 7 N6 ? ? ? 1_555 D DT 2 O4 ? ? C DA 7 D DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog31 hydrog ? ? C DA 8 N6 ? ? ? 1_555 D DT 1 O4 ? ? C DA 8 D DT 9 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ?
? ?
hydrog32 hydrog ? ? E DT 1 N3 ? ? ? 1_555 F DA 8 N1 ? ? E DT 1 F DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog33 hydrog ? ? E DT 1 O4 ? ? ? 1_555 F DA 8 N6 ? ? E DT 1 F DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog34 hydrog ? ? E DT 2 N3 ? ? ? 1_555 F DA 7 N1 ? ? E DT 2 F DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog35 hydrog ? ? E DT 2 O4 ? ? ? 1_555 F DA 7 N6 ? ? E DT 2 F DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog36 hydrog ? ? E DG 3 N1 ? ? ? 1_555 F DG 6 O6 ? ? E DG 3 F DG 14 1_555 ? ? ? ? ? ? 'DG-DG MISPAIR' ?
? ?
hydrog37 hydrog ? ? E DG 4 N1 ? ? ? 1_555 F DC 5 N3 ? ? E DG 4 F DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog38 hydrog ? ? E DG 4 N2 ? ? ? 1_555 F DC 5 O2 ? ? E DG 4 F DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog39 hydrog ? ? E DG 4 O6 ? ? ? 1_555 F DC 5 N4 ? ? E DG 4 F DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog40 hydrog ? ? E DC 5 N3 ? ? ? 1_555 F DG 4 N1 ? ? E DC 5 F DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog41 hydrog ? ? E DC 5 N4 ? ? ? 1_555 F DG 4 O6 ? ? E DC 5 F DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog42 hydrog ? ? E DC 5 O2 ? ? ? 1_555 F DG 4 N2 ? ? E DC 5 F DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog43 hydrog ? ? E DG 6 N1 ? ? ? 1_555 F DG 3 O6 ? ? E DG 6 F DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ?
? ?
hydrog44 hydrog ? ? E DG 6 N2 ? ? ? 1_555 F DG 3 N7 ? ? E DG 6 F DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ?
? ?
hydrog45 hydrog ? ? E DA 7 N1 ? ? ? 1_555 F DT 2 N3 ? ? E DA 7 F DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog46 hydrog ? ? E DA 7 N6 ? ? ? 1_555 F DT 2 O4 ? ? E DA 7 F DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog47 hydrog ? ? E DA 8 N1 ? ? ? 1_555 F DT 1 N3 ? ? E DA 8 F DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
hydrog48 hydrog ? ? E DA 8 N6 ? ? ? 1_555 F DT 1 O4 ? ? E DA 8 F DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ?
? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
covale ? ?
metalc ? ?
hydrog ? ?
#
_atom_sites.entry_id 6J0I
_atom_sites.fract_transf_matrix[1][1] 0.020909
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.020792
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.010339
_atom_sites.fract_transf_vector[1] 0.000000
_atom_sites.fract_transf_vector[2] 0.000000
_atom_sites.fract_transf_vector[3] 0.000000
#
loop_
_atom_type.symbol
C
CO
N
O
P
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 DT 1 1 1 DT DT A . n
A 1 2 DT 2 2 2 DT DT A . n
A 1 3 DG 3 3 3 DG DG A . n
A 1 4 DG 4 4 4 DG DG A . n
A 1 5 DC 5 5 5 DC DC A . n
A 1 6 DG 6 6 6 DG DG A . n
A 1 7 DA 7 7 7 DA DA A . n
A 1 8 DA 8 8 8 DA DA A . n
B 1 1 DT 1 9 9 DT DT B . n
B 1 2 DT 2 10 10 DT DT B . n
B 1 3 DG 3 11 11 DG DG B . n
B 1 4 DG 4 12 12 DG DG B . n
B 1 5 DC 5 13 13 DC DC B . n
B 1 6 DG 6 14 14 DG DG B . n
B 1 7 DA 7 15 15 DA DA B . n
B 1 8 DA 8 16 16 DA DA B . n
C 1 1 DT 1 1 1 DT DT C . n
C 1 2 DT 2 2 2 DT DT C . n
C 1 3 DG 3 3 3 DG DG C . n
C 1 4 DG 4 4 4 DG DG C . n
C 1 5 DC 5 5 5 DC DC C . n
C 1 6 DG 6 6 6 DG DG C . n
C 1 7 DA 7 7 7 DA DA C . n
C 1 8 DA 8 8 8 DA DA C . n
D 1 1 DT 1 9 9 DT DT D . n
D 1 2 DT 2 10 10 DT DT D . n
D 1 3 DG 3 11 11 DG DG D . n
D 1 4 DG 4 12 12 DG DG D . n
D 1 5 DC 5 13 13 DC DC D . n
D 1 6 DG 6 14 14 DG DG D . n
D 1 7 DA 7 15 15 DA DA D . n
D 1 8 DA 8 16 16 DA DA D . n
E 1 1 DT 1 1 1 DT DT E . n
E 1 2 DT 2 2 2 DT DT E . n
E 1 3 DG 3 3 3 DG DG E . n
E 1 4 DG 4 4 4 DG DG E . n
E 1 5 DC 5 5 5 DC DC E . n
E 1 6 DG 6 6 6 DG DG E . n
E 1 7 DA 7 7 7 DA DA E . n
E 1 8 DA 8 8 8 DA DA E . n
F 1 1 DT 1 9 9 DT DT F . n
F 1 2 DT 2 10 10 DT DT F . n
F 1 3 DG 3 11 11 DG DG F . n
F 1 4 DG 4 12 12 DG DG F . n
F 1 5 DC 5 13 13 DC DC F . n
F 1 6 DG 6 14 14 DG DG F . n
F 1 7 DA 7 15 15 DA DA F . n
F 1 8 DA 8 16 16 DA DA F . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
S 4 CRH 1 103 103 CRH CRH A .
T 5 CO 1 110 110 CO CO A .
U 5 CO 1 111 111 CO CO A .
V 4 CRH 1 103 103 CRH CRH B .
W 4 CRH 1 103 103 CRH CRH C .
X 5 CO 1 110 110 CO CO C .
Y 5 CO 1 111 111 CO CO C .
Z 4 CRH 1 103 103 CRH CRH D .
AA 5 CO 1 104 104 CO CO D .
BA 4 CRH 1 103 103 CRH CRH E .
CA 5 CO 1 110 110 CO CO E .
DA 4 CRH 1 103 103 CRH CRH F .
EA 5 CO 1 104 104 CO CO F .
FA 6 HOH 1 201 201 HOH HOH A .
FA 6 HOH 2 202 202 HOH HOH A .
FA 6 HOH 3 203 203 HOH HOH A .
FA 6 HOH 4 204 204 HOH HOH A .
FA 6 HOH 5 205 205 HOH HOH A .
FA 6 HOH 6 206 206 HOH HOH A .
FA 6 HOH 7 207 207 HOH HOH A .
FA 6 HOH 8 208 208 HOH HOH A .
FA 6 HOH 9 209 209 HOH HOH A .
FA 6 HOH 10 210 210 HOH HOH A .
FA 6 HOH 11 211 211 HOH HOH A .
FA 6 HOH 12 212 212 HOH HOH A .
FA 6 HOH 13 213 213 HOH HOH A .
FA 6 HOH 14 214 214 HOH HOH A .
FA 6 HOH 15 215 215 HOH HOH A .
FA 6 HOH 16 216 216 HOH HOH A .
FA 6 HOH 17 217 217 HOH HOH A .
FA 6 HOH 18 218 221 HOH HOH A .
FA 6 HOH 19 219 218 HOH HOH A .
FA 6 HOH 20 220 219 HOH HOH A .
FA 6 HOH 21 221 220 HOH HOH A .
FA 6 HOH 22 222 222 HOH HOH A .
FA 6 HOH 23 223 223 HOH HOH A .
FA 6 HOH 24 224 228 HOH HOH A .
FA 6 HOH 25 225 224 HOH HOH A .
FA 6 HOH 26 226 225 HOH HOH A .
FA 6 HOH 27 227 226 HOH HOH A .
FA 6 HOH 28 228 227 HOH HOH A .
FA 6 HOH 29 229 229 HOH HOH A .
FA 6 HOH 30 230 230 HOH HOH A .
FA 6 HOH 31 231 231 HOH HOH A .
FA 6 HOH 32 232 232 HOH HOH A .
FA 6 HOH 33 233 233 HOH HOH A .
FA 6 HOH 34 234 234 HOH HOH A .
FA 6 HOH 35 235 235 HOH HOH A .
FA 6 HOH 36 236 236 HOH HOH A .
FA 6 HOH 37 237 237 HOH HOH A .
FA 6 HOH 38 238 238 HOH HOH A .
FA 6 HOH 39 239 239 HOH HOH A .
FA 6 HOH 40 240 240 HOH HOH A .
FA 6 HOH 41 241 241 HOH HOH A .
FA 6 HOH 42 242 242 HOH HOH A .
FA 6 HOH 43 243 243 HOH HOH A .
FA 6 HOH 44 244 244 HOH HOH A .
FA 6 HOH 45 245 245 HOH HOH A .
FA 6 HOH 46 246 246 HOH HOH A .
FA 6 HOH 47 247 247 HOH HOH A .
FA 6 HOH 48 248 248 HOH HOH A .
FA 6 HOH 49 249 249 HOH HOH A .
FA 6 HOH 50 250 250 HOH HOH A .
FA 6 HOH 51 251 251 HOH HOH A .
FA 6 HOH 52 252 252 HOH HOH A .
FA 6 HOH 53 253 253 HOH HOH A .
FA 6 HOH 54 254 254 HOH HOH A .
FA 6 HOH 55 255 255 HOH HOH A .
FA 6 HOH 56 256 258 HOH HOH A .
FA 6 HOH 57 257 256 HOH HOH A .
FA 6 HOH 58 258 257 HOH HOH A .
FA 6 HOH 59 259 259 HOH HOH A .
FA 6 HOH 60 260 260 HOH HOH A .
FA 6 HOH 61 261 261 HOH HOH A .
FA 6 HOH 62 262 262 HOH HOH A .
FA 6 HOH 63 263 263 HOH HOH A .
FA 6 HOH 64 264 264 HOH HOH A .
FA 6 HOH 65 265 252 HOH HOH A .
GA 6 HOH 1 201 201 HOH HOH B .
GA 6 HOH 2 202 202 HOH HOH B .
GA 6 HOH 3 203 203 HOH HOH B .
GA 6 HOH 4 204 204 HOH HOH B .
GA 6 HOH 5 205 205 HOH HOH B .
GA 6 HOH 6 206 206 HOH HOH B .
GA 6 HOH 7 207 207 HOH HOH B .
GA 6 HOH 8 208 208 HOH HOH B .
GA 6 HOH 9 209 209 HOH HOH B .
GA 6 HOH 10 210 210 HOH HOH B .
GA 6 HOH 11 211 211 HOH HOH B .
GA 6 HOH 12 212 212 HOH HOH B .
GA 6 HOH 13 213 213 HOH HOH B .
GA 6 HOH 14 214 214 HOH HOH B .
GA 6 HOH 15 215 215 HOH HOH B .
GA 6 HOH 16 216 216 HOH HOH B .
GA 6 HOH 17 217 217 HOH HOH B .
GA 6 HOH 18 218 218 HOH HOH B .
GA 6 HOH 19 219 219 HOH HOH B .
GA 6 HOH 20 220 220 HOH HOH B .
GA 6 HOH 21 221 221 HOH HOH B .
GA 6 HOH 22 222 222 HOH HOH B .
GA 6 HOH 23 223 223 HOH HOH B .
GA 6 HOH 24 224 224 HOH HOH B .
GA 6 HOH 25 225 225 HOH HOH B .
GA 6 HOH 26 226 226 HOH HOH B .
GA 6 HOH 27 227 227 HOH HOH B .
GA 6 HOH 28 228 228 HOH HOH B .
GA 6 HOH 29 229 229 HOH HOH B .
GA 6 HOH 30 230 230 HOH HOH B .
GA 6 HOH 31 231 231 HOH HOH B .
GA 6 HOH 32 232 232 HOH HOH B .
GA 6 HOH 33 233 233 HOH HOH B .
GA 6 HOH 34 234 234 HOH HOH B .
GA 6 HOH 35 235 235 HOH HOH B .
GA 6 HOH 36 236 236 HOH HOH B .
GA 6 HOH 37 237 237 HOH HOH B .
GA 6 HOH 38 238 238 HOH HOH B .
GA 6 HOH 39 239 239 HOH HOH B .
GA 6 HOH 40 240 240 HOH HOH B .
GA 6 HOH 41 241 241 HOH HOH B .
GA 6 HOH 42 242 242 HOH HOH B .
GA 6 HOH 43 243 243 HOH HOH B .
GA 6 HOH 44 244 244 HOH HOH B .
GA 6 HOH 45 245 245 HOH HOH B .
GA 6 HOH 46 246 246 HOH HOH B .
HA 6 HOH 1 201 201 HOH HOH C .
HA 6 HOH 2 202 202 HOH HOH C .
HA 6 HOH 3 203 203 HOH HOH C .
HA 6 HOH 4 204 204 HOH HOH C .
HA 6 HOH 5 205 205 HOH HOH C .
HA 6 HOH 6 206 206 HOH HOH C .
HA 6 HOH 7 207 207 HOH HOH C .
HA 6 HOH 8 208 208 HOH HOH C .
HA 6 HOH 9 209 209 HOH HOH C .
HA 6 HOH 10 210 210 HOH HOH C .
HA 6 HOH 11 211 211 HOH HOH C .
HA 6 HOH 12 212 212 HOH HOH C .
HA 6 HOH 13 213 213 HOH HOH C .
HA 6 HOH 14 214 214 HOH HOH C .
HA 6 HOH 15 215 215 HOH HOH C .
HA 6 HOH 16 216 216 HOH HOH C .
HA 6 HOH 17 217 217 HOH HOH C .
HA 6 HOH 18 218 218 HOH HOH C .
HA 6 HOH 19 219 219 HOH HOH C .
HA 6 HOH 20 220 220 HOH HOH C .
HA 6 HOH 21 221 221 HOH HOH C .
HA 6 HOH 22 222 222 HOH HOH C .
HA 6 HOH 23 223 223 HOH HOH C .
HA 6 HOH 24 224 224 HOH HOH C .
HA 6 HOH 25 225 225 HOH HOH C .
HA 6 HOH 26 226 226 HOH HOH C .
HA 6 HOH 27 227 227 HOH HOH C .
HA 6 HOH 28 228 228 HOH HOH C .
HA 6 HOH 29 229 229 HOH HOH C .
HA 6 HOH 30 230 230 HOH HOH C .
HA 6 HOH 31 231 231 HOH HOH C .
HA 6 HOH 32 232 232 HOH HOH C .
HA 6 HOH 33 233 233 HOH HOH C .
HA 6 HOH 34 234 234 HOH HOH C .
HA 6 HOH 35 235 235 HOH HOH C .
HA 6 HOH 36 236 236 HOH HOH C .
HA 6 HOH 37 237 237 HOH HOH C .
HA 6 HOH 38 238 238 HOH HOH C .
HA 6 HOH 39 239 239 HOH HOH C .
HA 6 HOH 40 240 240 HOH HOH C .
HA 6 HOH 41 241 241 HOH HOH C .
HA 6 HOH 42 242 242 HOH HOH C .
HA 6 HOH 43 243 243 HOH HOH C .
HA 6 HOH 44 244 244 HOH HOH C .
HA 6 HOH 45 245 245 HOH HOH C .
HA 6 HOH 46 246 246 HOH HOH C .
HA 6 HOH 47 247 247 HOH HOH C .
HA 6 HOH 48 248 248 HOH HOH C .
HA 6 HOH 49 249 249 HOH HOH C .
HA 6 HOH 50 250 250 HOH HOH C .
HA 6 HOH 51 251 251 HOH HOH C .
HA 6 HOH 52 252 252 HOH HOH C .
HA 6 HOH 53 253 253 HOH HOH C .
HA 6 HOH 54 254 254 HOH HOH C .
HA 6 HOH 55 255 255 HOH HOH C .
HA 6 HOH 56 256 256 HOH HOH C .
HA 6 HOH 57 257 257 HOH HOH C .
HA 6 HOH 58 258 258 HOH HOH C .
HA 6 HOH 59 259 259 HOH HOH C .
HA 6 HOH 60 260 260 HOH HOH C .
HA 6 HOH 61 261 261 HOH HOH C .
HA 6 HOH 62 262 262 HOH HOH C .
HA 6 HOH 63 263 263 HOH HOH C .
HA 6 HOH 64 264 264 HOH HOH C .
HA 6 HOH 65 265 265 HOH HOH C .
HA 6 HOH 66 266 266 HOH HOH C .
HA 6 HOH 67 267 267 HOH HOH C .
HA 6 HOH 68 268 268 HOH HOH C .
HA 6 HOH 69 269 269 HOH HOH C .
HA 6 HOH 70 270 270 HOH HOH C .
HA 6 HOH 71 271 271 HOH HOH C .
HA 6 HOH 72 272 272 HOH HOH C .
HA 6 HOH 73 273 273 HOH HOH C .
HA 6 HOH 74 274 274 HOH HOH C .
IA 6 HOH 1 201 201 HOH HOH D .
IA 6 HOH 2 202 202 HOH HOH D .
IA 6 HOH 3 203 203 HOH HOH D .
IA 6 HOH 4 204 204 HOH HOH D .
IA 6 HOH 5 205 205 HOH HOH D .
IA 6 HOH 6 206 206 HOH HOH D .
IA 6 HOH 7 207 207 HOH HOH D .
IA 6 HOH 8 208 208 HOH HOH D .
IA 6 HOH 9 209 209 HOH HOH D .
IA 6 HOH 10 210 210 HOH HOH D .
IA 6 HOH 11 211 211 HOH HOH D .
IA 6 HOH 12 212 212 HOH HOH D .
IA 6 HOH 13 213 213 HOH HOH D .
IA 6 HOH 14 214 214 HOH HOH D .
IA 6 HOH 15 215 215 HOH HOH D .
IA 6 HOH 16 216 216 HOH HOH D .
IA 6 HOH 17 217 217 HOH HOH D .
IA 6 HOH 18 218 218 HOH HOH D .
IA 6 HOH 19 219 219 HOH HOH D .
IA 6 HOH 20 220 220 HOH HOH D .
IA 6 HOH 21 221 221 HOH HOH D .
IA 6 HOH 22 222 222 HOH HOH D .
IA 6 HOH 23 223 223 HOH HOH D .
IA 6 HOH 24 224 224 HOH HOH D .
IA 6 HOH 25 225 225 HOH HOH D .
IA 6 HOH 26 226 226 HOH HOH D .
IA 6 HOH 27 227 228 HOH HOH D .
IA 6 HOH 28 228 229 HOH HOH D .
IA 6 HOH 29 229 227 HOH HOH D .
IA 6 HOH 30 230 230 HOH HOH D .
IA 6 HOH 31 231 231 HOH HOH D .
IA 6 HOH 32 232 232 HOH HOH D .
IA 6 HOH 33 233 233 HOH HOH D .
IA 6 HOH 34 234 234 HOH HOH D .
IA 6 HOH 35 235 235 HOH HOH D .
IA 6 HOH 36 236 236 HOH HOH D .
IA 6 HOH 37 237 237 HOH HOH D .
IA 6 HOH 38 238 238 HOH HOH D .
IA 6 HOH 39 239 239 HOH HOH D .
IA 6 HOH 40 240 240 HOH HOH D .
IA 6 HOH 41 241 241 HOH HOH D .
IA 6 HOH 42 242 242 HOH HOH D .
IA 6 HOH 43 243 243 HOH HOH D .
IA 6 HOH 44 244 244 HOH HOH D .
IA 6 HOH 45 245 245 HOH HOH D .
IA 6 HOH 46 246 246 HOH HOH D .
IA 6 HOH 47 247 247 HOH HOH D .
IA 6 HOH 48 248 248 HOH HOH D .
IA 6 HOH 49 249 249 HOH HOH D .
IA 6 HOH 50 250 250 HOH HOH D .
IA 6 HOH 51 251 251 HOH HOH D .
JA 6 HOH 1 201 201 HOH HOH E .
JA 6 HOH 2 202 202 HOH HOH E .
JA 6 HOH 3 203 203 HOH HOH E .
JA 6 HOH 4 204 204 HOH HOH E .
JA 6 HOH 5 205 205 HOH HOH E .
JA 6 HOH 6 206 206 HOH HOH E .
JA 6 HOH 7 207 207 HOH HOH E .
JA 6 HOH 8 208 208 HOH HOH E .
JA 6 HOH 9 209 209 HOH HOH E .
JA 6 HOH 10 210 210 HOH HOH E .
JA 6 HOH 11 211 211 HOH HOH E .
JA 6 HOH 12 212 212 HOH HOH E .
JA 6 HOH 13 213 213 HOH HOH E .
JA 6 HOH 14 214 214 HOH HOH E .
JA 6 HOH 15 215 215 HOH HOH E .
JA 6 HOH 16 216 216 HOH HOH E .
JA 6 HOH 17 217 217 HOH HOH E .
JA 6 HOH 18 218 218 HOH HOH E .
JA 6 HOH 19 219 219 HOH HOH E .
JA 6 HOH 20 220 220 HOH HOH E .
JA 6 HOH 21 221 221 HOH HOH E .
JA 6 HOH 22 222 222 HOH HOH E .
JA 6 HOH 23 223 223 HOH HOH E .
JA 6 HOH 24 224 224 HOH HOH E .
JA 6 HOH 25 225 225 HOH HOH E .
JA 6 HOH 26 226 226 HOH HOH E .
JA 6 HOH 27 227 227 HOH HOH E .
JA 6 HOH 28 228 228 HOH HOH E .
JA 6 HOH 29 229 229 HOH HOH E .
JA 6 HOH 30 230 230 HOH HOH E .
JA 6 HOH 31 231 231 HOH HOH E .
JA 6 HOH 32 232 232 HOH HOH E .
JA 6 HOH 33 233 233 HOH HOH E .
JA 6 HOH 34 234 234 HOH HOH E .
JA 6 HOH 35 235 235 HOH HOH E .
JA 6 HOH 36 236 236 HOH HOH E .
JA 6 HOH 37 237 237 HOH HOH E .
JA 6 HOH 38 238 238 HOH HOH E .
JA 6 HOH 39 239 239 HOH HOH E .
JA 6 HOH 40 240 240 HOH HOH E .
JA 6 HOH 41 241 241 HOH HOH E .
JA 6 HOH 42 242 242 HOH HOH E .
JA 6 HOH 43 243 243 HOH HOH E .
JA 6 HOH 44 244 244 HOH HOH E .
JA 6 HOH 45 245 245 HOH HOH E .
JA 6 HOH 46 246 246 HOH HOH E .
JA 6 HOH 47 247 247 HOH HOH E .
JA 6 HOH 48 248 248 HOH HOH E .
JA 6 HOH 49 249 249 HOH HOH E .
JA 6 HOH 50 250 250 HOH HOH E .
JA 6 HOH 51 251 251 HOH HOH E .
JA 6 HOH 52 252 252 HOH HOH E .
JA 6 HOH 53 253 253 HOH HOH E .
JA 6 HOH 54 254 254 HOH HOH E .
JA 6 HOH 55 255 255 HOH HOH E .
JA 6 HOH 56 256 256 HOH HOH E .
JA 6 HOH 57 257 257 HOH HOH E .
JA 6 HOH 58 258 258 HOH HOH E .
JA 6 HOH 59 259 259 HOH HOH E .
JA 6 HOH 60 260 260 HOH HOH E .
JA 6 HOH 61 261 261 HOH HOH E .
JA 6 HOH 62 262 262 HOH HOH E .
JA 6 HOH 63 263 263 HOH HOH E .
JA 6 HOH 64 264 264 HOH HOH E .
JA 6 HOH 65 265 265 HOH HOH E .
JA 6 HOH 66 266 266 HOH HOH E .
JA 6 HOH 67 267 267 HOH HOH E .
JA 6 HOH 68 268 268 HOH HOH E .
JA 6 HOH 69 269 269 HOH HOH E .
JA 6 HOH 70 270 270 HOH HOH E .
JA 6 HOH 71 271 271 HOH HOH E .
JA 6 HOH 72 272 272 HOH HOH E .
JA 6 HOH 73 273 273 HOH HOH E .
JA 6 HOH 74 274 274 HOH HOH E .
JA 6 HOH 75 275 275 HOH HOH E .
JA 6 HOH 76 276 276 HOH HOH E .
JA 6 HOH 77 277 277 HOH HOH E .
JA 6 HOH 78 278 278 HOH HOH E .
KA 6 HOH 1 201 201 HOH HOH F .
KA 6 HOH 2 202 202 HOH HOH F .
KA 6 HOH 3 203 203 HOH HOH F .
KA 6 HOH 4 204 204 HOH HOH F .
KA 6 HOH 5 205 205 HOH HOH F .
KA 6 HOH 6 206 206 HOH HOH F .
KA 6 HOH 7 207 207 HOH HOH F .
KA 6 HOH 8 208 208 HOH HOH F .
KA 6 HOH 9 209 209 HOH HOH F .
KA 6 HOH 10 210 210 HOH HOH F .
KA 6 HOH 11 211 211 HOH HOH F .
KA 6 HOH 12 212 212 HOH HOH F .
KA 6 HOH 13 213 213 HOH HOH F .
KA 6 HOH 14 214 214 HOH HOH F .
KA 6 HOH 15 215 215 HOH HOH F .
KA 6 HOH 16 216 216 HOH HOH F .
KA 6 HOH 17 217 217 HOH HOH F .
KA 6 HOH 18 218 218 HOH HOH F .
KA 6 HOH 19 219 219 HOH HOH F .
KA 6 HOH 20 220 220 HOH HOH F .
KA 6 HOH 21 221 221 HOH HOH F .
KA 6 HOH 22 222 222 HOH HOH F .
KA 6 HOH 23 223 223 HOH HOH F .
KA 6 HOH 24 224 224 HOH HOH F .
KA 6 HOH 25 225 225 HOH HOH F .
KA 6 HOH 26 226 226 HOH HOH F .
KA 6 HOH 27 227 227 HOH HOH F .
KA 6 HOH 28 228 228 HOH HOH F .
KA 6 HOH 29 229 229 HOH HOH F .
KA 6 HOH 30 230 230 HOH HOH F .
KA 6 HOH 31 231 231 HOH HOH F .
KA 6 HOH 32 232 232 HOH HOH F .
KA 6 HOH 33 233 233 HOH HOH F .
KA 6 HOH 34 234 234 HOH HOH F .
KA 6 HOH 35 235 235 HOH HOH F .
KA 6 HOH 36 236 236 HOH HOH F .
KA 6 HOH 37 237 237 HOH HOH F .
KA 6 HOH 38 238 238 HOH HOH F .
KA 6 HOH 39 239 239 HOH HOH F .
KA 6 HOH 40 240 240 HOH HOH F .
KA 6 HOH 41 241 241 HOH HOH F .
KA 6 HOH 42 242 242 HOH HOH F .
KA 6 HOH 43 243 243 HOH HOH F .
KA 6 HOH 44 244 244 HOH HOH F .
KA 6 HOH 45 245 245 HOH HOH F .
KA 6 HOH 46 246 246 HOH HOH F .
KA 6 HOH 47 247 247 HOH HOH F .
KA 6 HOH 48 248 248 HOH HOH F .
KA 6 HOH 49 249 249 HOH HOH F .
KA 6 HOH 50 250 250 HOH HOH F .
KA 6 HOH 51 251 251 HOH HOH F .
KA 6 HOH 52 252 252 HOH HOH F .
KA 6 HOH 53 253 253 HOH HOH F .
KA 6 HOH 54 254 254 HOH HOH F .
KA 6 HOH 55 255 255 HOH HOH F .
KA 6 HOH 56 256 256 HOH HOH F .
KA 6 HOH 57 257 257 HOH HOH F .
KA 6 HOH 58 258 258 HOH HOH F .
KA 6 HOH 59 259 259 HOH HOH F .
KA 6 HOH 60 260 260 HOH HOH F .
KA 6 HOH 61 261 261 HOH HOH F .
KA 6 HOH 62 262 262 HOH HOH F .
KA 6 HOH 63 263 263 HOH HOH F .
KA 6 HOH 64 264 264 HOH HOH F .
KA 6 HOH 65 265 265 HOH HOH F .
KA 6 HOH 66 266 266 HOH HOH F .
KA 6 HOH 67 267 267 HOH HOH F .
#
loop_
_pdbx_struct_assembly.id
_pdbx_struct_assembly.details
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
1 author_and_software_defined_assembly PISA dimeric 2
2 author_and_software_defined_assembly PISA dimeric 2
3 author_and_software_defined_assembly PISA dimeric 2
#
loop_
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
_pdbx_struct_assembly_gen.asym_id_list
1 1 A,B,G,H,I,J,S,T,U,V,FA,GA
2 1 C,D,K,L,M,N,W,X,Y,Z,AA,HA,IA
3 1 E,F,O,P,Q,R,BA,CA,DA,EA,JA,KA
#
loop_
_pdbx_struct_assembly_prop.biol_id
_pdbx_struct_assembly_prop.type
_pdbx_struct_assembly_prop.value
_pdbx_struct_assembly_prop.details
1 'ABSA (A^2)' 750 ?
1 MORE -4 ?
1 'SSA (A^2)' 3210 ?
2 'ABSA (A^2)' 740 ?
2 MORE -3 ?
2 'SSA (A^2)' 3240 ?
3 'ABSA (A^2)' 750 ?
3 MORE -5 ?
3 'SSA (A^2)' 3190 ?
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
loop_
_pdbx_struct_special_symmetry.id
_pdbx_struct_special_symmetry.PDB_model_num
_pdbx_struct_special_symmetry.auth_asym_id
_pdbx_struct_special_symmetry.auth_comp_id
_pdbx_struct_special_symmetry.auth_seq_id
_pdbx_struct_special_symmetry.PDB_ins_code
_pdbx_struct_special_symmetry.label_asym_id
_pdbx_struct_special_symmetry.label_comp_id
_pdbx_struct_special_symmetry.label_seq_id
1 1 A HOH 258 ? FA HOH .
2 1 C HOH 261 ? HA HOH .
3 1 E HOH 220 ? JA HOH .
4 1 F HOH 242 ? KA HOH .
#
loop_
_pdbx_struct_conn_angle.id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_alt_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr1_auth_atom_id
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_alt_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr2_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_atom_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code
_pdbx_struct_conn_angle.ptnr2_symmetry
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_alt_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_atom_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_pdbx_struct_conn_angle.value_esd
1 N7 ? A DG 4 ? A DG 4 ? 1_555 CO ? U CO . ? A CO 111 ? 1_555 O ? FA HOH . ? A HOH 210 ? 1_555 94.7 ?
2 O1 ? S CRH . ? A CRH 103 ? 1_555 CO ? T CO . ? A CO 110 ? 1_555 O9 ? S CRH . ? A CRH 103 ? 1_555 66.0 ?
3 O1 ? S CRH . ? A CRH 103 ? 1_555 CO ? T CO . ? A CO 110 ? 1_555 O1 ? V CRH . ? B CRH 103 ? 1_555 61.5 ?
4 O9 ? S CRH . ? A CRH 103 ? 1_555 CO ? T CO . ? A CO 110 ? 1_555 O1 ? V CRH . ? B CRH 103 ? 1_555 90.0 ?
5 O1 ? S CRH . ? A CRH 103 ? 1_555 CO ? T CO . ? A CO 110 ? 1_555 O9 ? V CRH . ? B CRH 103 ? 1_555 85.5 ?
6 O9 ? S CRH . ? A CRH 103 ? 1_555 CO ? T CO . ? A CO 110 ? 1_555 O9 ? V CRH . ? B CRH 103 ? 1_555 149.1 ?
7 O1 ? V CRH . ? B CRH 103 ? 1_555 CO ? T CO . ? A CO 110 ? 1_555 O9 ? V CRH . ? B CRH 103 ? 1_555 64.9 ?
8 N7 ? C DG 3 ? C DG 3 ? 1_555 CO ? Y CO . ? C CO 111 ? 1_555 O ? HA HOH . ? C HOH 205 ? 1_555 114.9 ?
9 N7 ? C DG 3 ? C DG 3 ? 1_555 CO ? Y CO . ? C CO 111 ? 1_555 O ? HA HOH . ? C HOH 216 ? 1_555 77.2 ?
10 O ? HA HOH . ? C HOH 205 ? 1_555 CO ? Y CO . ? C CO 111 ? 1_555 O ? HA HOH . ? C HOH 216 ? 1_555 90.4 ?
11 N7 ? C DG 3 ? C DG 3 ? 1_555 CO ? Y CO . ? C CO 111 ? 1_555 O ? IA HOH . ? D HOH 210 ? 4_545 117.9 ?
12 O ? HA HOH . ? C HOH 205 ? 1_555 CO ? Y CO . ? C CO 111 ? 1_555 O ? IA HOH . ? D HOH 210 ? 4_545 117.8 ?
13 O ? HA HOH . ? C HOH 216 ? 1_555 CO ? Y CO . ? C CO 111 ? 1_555 O ? IA HOH . ? D HOH 210 ? 4_545 72.1 ?
14 N7 ? C DG 3 ? C DG 3 ? 1_555 CO ? Y CO . ? C CO 111 ? 1_555 O ? IA HOH . ? D HOH 228 ? 4_545 144.9 ?
15 O ? HA HOH . ? C HOH 205 ? 1_555 CO ? Y CO . ? C CO 111 ? 1_555 O ? IA HOH . ? D HOH 228 ? 4_545 74.3 ?
16 O ? HA HOH . ? C HOH 216 ? 1_555 CO ? Y CO . ? C CO 111 ? 1_555 O ? IA HOH . ? D HOH 228 ? 4_545 137.9 ?
17 O ? IA HOH . ? D HOH 210 ? 4_545 CO ? Y CO . ? C CO 111 ? 1_555 O ? IA HOH . ? D HOH 228 ? 4_545 80.8 ?
18 O1 ? W CRH . ? C CRH 103 ? 1_555 CO ? X CO . ? C CO 110 ? 1_555 O9 ? W CRH . ? C CRH 103 ? 1_555 67.3 ?
19 O1 ? W CRH . ? C CRH 103 ? 1_555 CO ? X CO . ? C CO 110 ? 1_555 O1 ? Z CRH . ? D CRH 103 ? 1_555 74.1 ?
20 O9 ? W CRH . ? C CRH 103 ? 1_555 CO ? X CO . ? C CO 110 ? 1_555 O1 ? Z CRH . ? D CRH 103 ? 1_555 93.7 ?
21 O1 ? W CRH . ? C CRH 103 ? 1_555 CO ? X CO . ? C CO 110 ? 1_555 O9 ? Z CRH . ? D CRH 103 ? 1_555 111.8 ?
22 O9 ? W CRH . ? C CRH 103 ? 1_555 CO ? X CO . ? C CO 110 ? 1_555 O9 ? Z CRH . ? D CRH 103 ? 1_555 155.2 ?
23 O1 ? Z CRH . ? D CRH 103 ? 1_555 CO ? X CO . ? C CO 110 ? 1_555 O9 ? Z CRH . ? D CRH 103 ? 1_555 63.5 ?
24 O1 ? BA CRH . ? E CRH 103 ? 1_555 CO ? CA CO . ? E CO 110 ? 1_555 O9 ? BA CRH . ? E CRH 103 ? 1_555 70.6 ?
25 O1 ? BA CRH . ? E CRH 103 ? 1_555 CO ? CA CO . ? E CO 110 ? 1_555 O1 ? DA CRH . ? F CRH 103 ? 1_555 80.4 ?
26 O9 ? BA CRH . ? E CRH 103 ? 1_555 CO ? CA CO . ? E CO 110 ? 1_555 O1 ? DA CRH . ? F CRH 103 ? 1_555 107.8 ?
27 O1 ? BA CRH . ? E CRH 103 ? 1_555 CO ? CA CO . ? E CO 110 ? 1_555 O9 ? DA CRH . ? F CRH 103 ? 1_555 104.9 ?
28 O9 ? BA CRH . ? E CRH 103 ? 1_555 CO ? CA CO . ? E CO 110 ? 1_555 O9 ? DA CRH . ? F CRH 103 ? 1_555 171.3 ?
29 O1 ? DA CRH . ? F CRH 103 ? 1_555 CO ? CA CO . ? E CO 110 ? 1_555 O9 ? DA CRH . ? F CRH 103 ? 1_555 63.7 ?
30 N7 ? F DG 4 ? F DG 12 ? 1_555 CO ? EA CO . ? F CO 104 ? 1_555 O ? KA HOH . ? F HOH 214 ? 1_555 97.3 ?
31 N7 ? F DG 4 ? F DG 12 ? 1_555 CO ? EA CO . ? F CO 104 ? 1_555 O ? KA HOH . ? F HOH 227 ? 1_555 143.6 ?
32 O ? KA HOH . ? F HOH 214 ? 1_555 CO ? EA CO . ? F CO 104 ? 1_555 O ? KA HOH . ? F HOH 227 ? 1_555 117.2 ?
33 N7 ? F DG 4 ? F DG 12 ? 1_555 CO ? EA CO . ? F CO 104 ? 1_555 O ? KA HOH . ? F HOH 247 ? 1_555 151.0 ?
34 O ? KA HOH . ? F HOH 214 ? 1_555 CO ? EA CO . ? F CO 104 ? 1_555 O ? KA HOH . ? F HOH 247 ? 1_555 60.7 ?
35 O ? KA HOH . ? F HOH 227 ? 1_555 CO ? EA CO . ? F CO 104 ? 1_555 O ? KA HOH . ? F HOH 247 ? 1_555 57.0 ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2019-07-24
2 'Structure model' 1 1 2019-08-21
3 'Structure model' 1 2 2019-10-30
4 'Structure model' 2 0 2020-07-29
5 'Structure model' 2 1 2023-11-22
#
loop_
_pdbx_audit_revision_details.ordinal
_pdbx_audit_revision_details.revision_ordinal
_pdbx_audit_revision_details.data_content_type
_pdbx_audit_revision_details.provider
_pdbx_audit_revision_details.type
_pdbx_audit_revision_details.description
_pdbx_audit_revision_details.details
1 1 'Structure model' repository 'Initial release' ? ?
2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Data collection'
2 2 'Structure model' 'Database references'
3 3 'Structure model' 'Data collection'
4 3 'Structure model' 'Database references'
5 4 'Structure model' Advisory
6 4 'Structure model' 'Atomic model'
7 4 'Structure model' 'Data collection'
8 4 'Structure model' 'Derived calculations'
9 4 'Structure model' 'Structure summary'
10 5 'Structure model' 'Data collection'
11 5 'Structure model' 'Database references'
12 5 'Structure model' 'Derived calculations'
13 5 'Structure model' 'Refinement description'
14 5 'Structure model' 'Structure summary'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 2 'Structure model' citation
2 2 'Structure model' citation_author
3 3 'Structure model' citation
4 4 'Structure model' atom_site
5 4 'Structure model' chem_comp
6 4 'Structure model' entity
7 4 'Structure model' pdbx_branch_scheme
8 4 'Structure model' pdbx_chem_comp_identifier
9 4 'Structure model' pdbx_entity_branch
10 4 'Structure model' pdbx_entity_branch_descriptor
11 4 'Structure model' pdbx_entity_branch_link
12 4 'Structure model' pdbx_entity_branch_list
13 4 'Structure model' pdbx_entity_nonpoly
14 4 'Structure model' pdbx_nonpoly_scheme
15 4 'Structure model' pdbx_struct_assembly_gen
16 4 'Structure model' pdbx_struct_conn_angle
17 4 'Structure model' pdbx_struct_special_symmetry
18 4 'Structure model' pdbx_validate_close_contact
19 4 'Structure model' struct_asym
20 4 'Structure model' struct_conn
21 4 'Structure model' struct_conn_type
22 4 'Structure model' struct_site
23 4 'Structure model' struct_site_gen
24 5 'Structure model' chem_comp
25 5 'Structure model' chem_comp_atom
26 5 'Structure model' chem_comp_bond
27 5 'Structure model' database_2
28 5 'Structure model' pdbx_initial_refinement_model
29 5 'Structure model' struct_conn
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 2 'Structure model' '_citation.country'
2 2 'Structure model' '_citation.journal_abbrev'
3 2 'Structure model' '_citation.journal_id_ASTM'
4 2 'Structure model' '_citation.journal_id_CSD'
5 2 'Structure model' '_citation.journal_id_ISSN'
6 2 'Structure model' '_citation.pdbx_database_id_DOI'
7 2 'Structure model' '_citation.pdbx_database_id_PubMed'
8 2 'Structure model' '_citation.title'
9 2 'Structure model' '_citation.year'
10 3 'Structure model' '_citation.journal_volume'
11 3 'Structure model' '_citation.page_first'
12 3 'Structure model' '_citation.page_last'
13 4 'Structure model' '_atom_site.B_iso_or_equiv'
14 4 'Structure model' '_atom_site.Cartn_x'
15 4 'Structure model' '_atom_site.Cartn_y'
16 4 'Structure model' '_atom_site.Cartn_z'
17 4 'Structure model' '_atom_site.auth_asym_id'
18 4 'Structure model' '_atom_site.auth_atom_id'
19 4 'Structure model' '_atom_site.auth_comp_id'
20 4 'Structure model' '_atom_site.auth_seq_id'
21 4 'Structure model' '_atom_site.label_asym_id'
22 4 'Structure model' '_atom_site.label_atom_id'
23 4 'Structure model' '_atom_site.label_comp_id'
24 4 'Structure model' '_atom_site.label_entity_id'
25 4 'Structure model' '_atom_site.occupancy'
26 4 'Structure model' '_atom_site.type_symbol'
27 4 'Structure model' '_chem_comp.mon_nstd_flag'
28 4 'Structure model' '_chem_comp.name'
29 4 'Structure model' '_chem_comp.type'
30 4 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list'
31 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id'
32 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id'
33 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id'
34 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id'
35 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id'
36 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id'
37 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id'
38 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry'
39 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id'
40 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id'
41 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id'
42 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id'
43 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id'
44 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id'
45 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id'
46 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id'
47 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id'
48 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry'
49 4 'Structure model' '_pdbx_struct_conn_angle.value'
50 4 'Structure model' '_pdbx_struct_special_symmetry.label_asym_id'
51 4 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_1'
52 4 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_2'
53 4 'Structure model' '_pdbx_validate_close_contact.auth_atom_id_1'
54 4 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_1'
55 4 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_2'
56 4 'Structure model' '_struct_conn.conn_type_id'
57 4 'Structure model' '_struct_conn.id'
58 4 'Structure model' '_struct_conn.pdbx_dist_value'
59 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
60 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id'
61 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id'
62 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id'
63 4 'Structure model' '_struct_conn.ptnr1_label_asym_id'
64 4 'Structure model' '_struct_conn.ptnr1_label_atom_id'
65 4 'Structure model' '_struct_conn.ptnr1_label_comp_id'
66 4 'Structure model' '_struct_conn.ptnr1_label_seq_id'
67 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id'
68 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id'
69 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id'
70 4 'Structure model' '_struct_conn.ptnr2_label_asym_id'
71 4 'Structure model' '_struct_conn.ptnr2_label_atom_id'
72 4 'Structure model' '_struct_conn.ptnr2_label_comp_id'
73 4 'Structure model' '_struct_conn.ptnr2_symmetry'
74 4 'Structure model' '_struct_conn_type.id'
75 5 'Structure model' '_chem_comp.pdbx_synonyms'
76 5 'Structure model' '_database_2.pdbx_DOI'
77 5 'Structure model' '_database_2.pdbx_database_accession'
78 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
#
loop_
_software.citation_id
_software.classification
_software.compiler_name
_software.compiler_version
_software.contact_author
_software.contact_author_email
_software.date
_software.description
_software.dependencies
_software.hardware
_software.language
_software.location
_software.mods
_software.name
_software.os
_software.os_version
_software.type
_software.version
_software.pdbx_ordinal
? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.9_1692 1
? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2
? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.24 3
? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 4
? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.9_1692 5
#
loop_
_pdbx_validate_close_contact.id
_pdbx_validate_close_contact.PDB_model_num
_pdbx_validate_close_contact.auth_atom_id_1
_pdbx_validate_close_contact.auth_asym_id_1
_pdbx_validate_close_contact.auth_comp_id_1
_pdbx_validate_close_contact.auth_seq_id_1
_pdbx_validate_close_contact.PDB_ins_code_1
_pdbx_validate_close_contact.label_alt_id_1
_pdbx_validate_close_contact.auth_atom_id_2
_pdbx_validate_close_contact.auth_asym_id_2
_pdbx_validate_close_contact.auth_comp_id_2
_pdbx_validate_close_contact.auth_seq_id_2
_pdbx_validate_close_contact.PDB_ins_code_2
_pdbx_validate_close_contact.label_alt_id_2
_pdbx_validate_close_contact.dist
1 1 O E HOH 226 ? ? O E HOH 243 ? ? 1.83
2 1 O3 L ERI 3 ? ? O C HOH 201 ? ? 1.91
3 1 O E HOH 204 ? ? O E HOH 242 ? ? 1.95
4 1 N2 A DG 4 ? ? O2 B DC 13 ? ? 2.05
5 1 OP2 A DA 7 ? ? O A HOH 201 ? ? 2.06
6 1 "O5'" A DT 1 ? ? O A HOH 202 ? ? 2.10
7 1 OP2 A DG 4 ? ? O A HOH 203 ? ? 2.11
8 1 "O2'" A CRH 103 ? ? O A HOH 204 ? ? 2.11
9 1 O1 O ARI 1 ? ? C5 E CRH 103 ? ? 2.11
10 1 O1 G ARI 1 ? ? C7 A CRH 103 ? ? 2.12
11 1 O5 K 1GL 2 ? ? O C HOH 202 ? ? 2.14
12 1 O1 Q CDR 1 ? ? C1 F CRH 103 ? ? 2.14
13 1 O D HOH 203 ? ? O D HOH 214 ? ? 2.16
14 1 OC4 I ERI 3 ? ? O A HOH 205 ? ? 2.16
15 1 C4 P CDR 2 ? ? O1 P ERI 3 ? ? 2.19
#
_pdbx_validate_symm_contact.id 1
_pdbx_validate_symm_contact.PDB_model_num 1
_pdbx_validate_symm_contact.auth_atom_id_1 O
_pdbx_validate_symm_contact.auth_asym_id_1 D
_pdbx_validate_symm_contact.auth_comp_id_1 HOH
_pdbx_validate_symm_contact.auth_seq_id_1 230
_pdbx_validate_symm_contact.PDB_ins_code_1 ?
_pdbx_validate_symm_contact.label_alt_id_1 ?
_pdbx_validate_symm_contact.site_symmetry_1 1_555
_pdbx_validate_symm_contact.auth_atom_id_2 O
_pdbx_validate_symm_contact.auth_asym_id_2 D
_pdbx_validate_symm_contact.auth_comp_id_2 HOH
_pdbx_validate_symm_contact.auth_seq_id_2 235
_pdbx_validate_symm_contact.PDB_ins_code_2 ?
_pdbx_validate_symm_contact.label_alt_id_2 ?
_pdbx_validate_symm_contact.site_symmetry_2 4_545
_pdbx_validate_symm_contact.dist 1.81
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.86 108.30 2.56 0.30 N
2 1 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? N9 B DG 14 ? ? 111.43 108.30 3.13 0.30 N
3 1 "O4'" C DG 3 ? ? "C1'" C DG 3 ? ? N9 C DG 3 ? ? 110.79 108.30 2.49 0.30 N
4 1 "O4'" D DG 14 ? ? "C1'" D DG 14 ? ? N9 D DG 14 ? ? 110.55 108.30 2.25 0.30 N
5 1 "C3'" E DG 3 ? ? "C2'" E DG 3 ? ? "C1'" E DG 3 ? ? 96.04 102.40 -6.36 0.80 N
6 1 "O4'" E DG 3 ? ? "C1'" E DG 3 ? ? N9 E DG 3 ? ? 112.98 108.30 4.68 0.30 N
7 1 "O4'" E DA 7 ? ? "C1'" E DA 7 ? ? N9 E DA 7 ? ? 110.38 108.30 2.08 0.30 N
8 1 "O4'" F DG 11 ? ? "C4'" F DG 11 ? ? "C3'" F DG 11 ? ? 101.99 104.50 -2.51 0.40 N
9 1 "O4'" F DG 11 ? ? "C1'" F DG 11 ? ? N9 F DG 11 ? ? 112.12 108.30 3.82 0.30 N
#
loop_
_pdbx_distant_solvent_atoms.id
_pdbx_distant_solvent_atoms.PDB_model_num
_pdbx_distant_solvent_atoms.auth_atom_id
_pdbx_distant_solvent_atoms.label_alt_id
_pdbx_distant_solvent_atoms.auth_asym_id
_pdbx_distant_solvent_atoms.auth_comp_id
_pdbx_distant_solvent_atoms.auth_seq_id
_pdbx_distant_solvent_atoms.PDB_ins_code
_pdbx_distant_solvent_atoms.neighbor_macromolecule_distance
_pdbx_distant_solvent_atoms.neighbor_ligand_distance
1 1 O ? A HOH 263 ? . 6.74
2 1 O ? A HOH 264 ? . 6.99
3 1 O ? A HOH 265 ? . 7.64
4 1 O ? B HOH 240 ? 5.83 .
5 1 O ? B HOH 241 ? 5.91 .
6 1 O ? B HOH 242 ? 5.91 .
7 1 O ? B HOH 243 ? 6.03 .
8 1 O ? B HOH 244 ? 6.23 .
9 1 O ? B HOH 245 ? . 6.41
10 1 O ? B HOH 246 ? 7.15 .
11 1 O ? C HOH 270 ? 6.03 .
12 1 O ? C HOH 271 ? . 6.29
13 1 O ? C HOH 272 ? 7.38 .
14 1 O ? C HOH 273 ? . 8.18
15 1 O ? C HOH 274 ? . 9.09
16 1 O ? D HOH 248 ? 6.00 .
17 1 O ? D HOH 249 ? . 6.70
18 1 O ? D HOH 250 ? . 7.20
19 1 O ? D HOH 251 ? . 7.23
20 1 O ? E HOH 272 ? . 6.21
21 1 O ? E HOH 273 ? 6.43 .
22 1 O ? E HOH 274 ? 6.62 .
23 1 O ? E HOH 275 ? 7.27 .
24 1 O ? E HOH 276 ? 7.48 .
25 1 O ? E HOH 277 ? . 7.59
26 1 O ? E HOH 278 ? . 7.81
27 1 O ? F HOH 260 ? 6.04 .
28 1 O ? F HOH 261 ? 6.10 .
29 1 O ? F HOH 262 ? 6.33 .
30 1 O ? F HOH 263 ? 6.58 .
31 1 O ? F HOH 264 ? 6.70 .
32 1 O ? F HOH 265 ? 6.75 .
33 1 O ? F HOH 266 ? 6.95 .
34 1 O ? F HOH 267 ? . 7.18
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
1GL O1 O N N 1
1GL C1 C N S 2
1GL C2 C N N 3
1GL C3 C N R 4
1GL O3 O N N 5
1GL C4 C N R 6
1GL O4 O N N 7
1GL CME C N N 8
1GL C5 C N R 9
1GL O5 O N N 10
1GL C6 C N N 11
1GL HO1 H N N 12
1GL H1 H N N 13
1GL H2 H N N 14
1GL H22 H N N 15
1GL H3 H N N 16
1GL HO3 H N N 17
1GL H4 H N N 18
1GL HM41 H N N 19
1GL HM42 H N N 20
1GL HM43 H N N 21
1GL H5 H N N 22
1GL H61 H N N 23
1GL H62 H N N 24
1GL H63 H N N 25
ARI O1 O N N 26
ARI C1 C N R 27
ARI C2 C N N 28
ARI C3 C N N 29
ARI C4 C N R 30
ARI O4 O N N 31
ARI CME C N N 32
ARI CO4 C N N 33
ARI OC4 O N N 34
ARI C5 C N R 35
ARI O5 O N N 36
ARI C6 C N N 37
ARI HO1 H N N 38
ARI H1 H N N 39
ARI H2 H N N 40
ARI H22 H N N 41
ARI H3 H N N 42
ARI H32 H N N 43
ARI H4 H N N 44
ARI H41 H N N 45
ARI H42 H N N 46
ARI H43 H N N 47
ARI H5 H N N 48
ARI H61 H N N 49
ARI H62 H N N 50
ARI H63 H N N 51
CDR O1 O N N 52
CDR C1 C N R 53
CDR C2 C N N 54
CDR C3 C N N 55
CDR C4 C N S 56
CDR O4 O N N 57
CDR C5 C N R 58
CDR O5 O N N 59
CDR C6 C N N 60
CDR HO1 H N N 61
CDR H1 H N N 62
CDR H2 H N N 63
CDR H22 H N N 64
CDR H3 H N N 65
CDR H32 H N N 66
CDR H4 H N N 67
CDR HO4 H N N 68
CDR H5 H N N 69
CDR H61 H N N 70
CDR H62 H N N 71
CDR H63 H N N 72
CO CO CO N N 73
CRH C1 C N N 74
CRH C2 C N N 75
CRH C3 C N R 76
CRH C4 C N N 77
CRH C5 C Y N 78
CRH C6 C Y N 79
CRH C7 C Y N 80
CRH C8 C Y N 81
CRH C9 C Y N 82
CRH C10 C Y N 83
CRH C11 C Y N 84
CRH C12 C Y N 85
CRH C13 C Y N 86
CRH C14 C Y N 87
CRH C15 C N N 88
CRH O1 O N N 89
CRH O8 O N N 90
CRH O9 O N N 91
CRH "C1'" C N S 92
CRH "C2'" C N N 93
CRH "C3'" C N S 94
CRH "C4'" C N R 95
CRH C1M C N N 96
CRH C4M C N N 97
CRH "O1'" O N N 98
CRH "O2'" O N N 99
CRH "O3'" O N N 100
CRH "O4'" O N N 101
CRH H21 H N N 102
CRH H22 H N N 103
CRH H3 H N N 104
CRH H41 H N N 105
CRH H42 H N N 106
CRH H5 H N N 107
CRH H6 H N N 108
CRH H10 H N N 109
CRH H151 H N N 110
CRH H152 H N N 111
CRH H153 H N N 112
CRH HO8 H N N 113
CRH HO9 H N N 114
CRH "H1'" H N N 115
CRH "H3'" H N N 116
CRH "H4'" H N N 117
CRH "H1'1" H N N 118
CRH "H1'2" H N N 119
CRH "H1'3" H N N 120
CRH "H4'1" H N N 121
CRH "H4'2" H N N 122
CRH "H4'3" H N N 123
CRH HO3 H N N 124
CRH HO4 H N N 125
DA OP3 O N N 126
DA P P N N 127
DA OP1 O N N 128
DA OP2 O N N 129
DA "O5'" O N N 130
DA "C5'" C N N 131
DA "C4'" C N R 132
DA "O4'" O N N 133
DA "C3'" C N S 134
DA "O3'" O N N 135
DA "C2'" C N N 136
DA "C1'" C N R 137
DA N9 N Y N 138
DA C8 C Y N 139
DA N7 N Y N 140
DA C5 C Y N 141
DA C6 C Y N 142
DA N6 N N N 143
DA N1 N Y N 144
DA C2 C Y N 145
DA N3 N Y N 146
DA C4 C Y N 147
DA HOP3 H N N 148
DA HOP2 H N N 149
DA "H5'" H N N 150
DA "H5''" H N N 151
DA "H4'" H N N 152
DA "H3'" H N N 153
DA "HO3'" H N N 154
DA "H2'" H N N 155
DA "H2''" H N N 156
DA "H1'" H N N 157
DA H8 H N N 158
DA H61 H N N 159
DA H62 H N N 160
DA H2 H N N 161
DC OP3 O N N 162
DC P P N N 163
DC OP1 O N N 164
DC OP2 O N N 165
DC "O5'" O N N 166
DC "C5'" C N N 167
DC "C4'" C N R 168
DC "O4'" O N N 169
DC "C3'" C N S 170
DC "O3'" O N N 171
DC "C2'" C N N 172
DC "C1'" C N R 173
DC N1 N N N 174
DC C2 C N N 175
DC O2 O N N 176
DC N3 N N N 177
DC C4 C N N 178
DC N4 N N N 179
DC C5 C N N 180
DC C6 C N N 181
DC HOP3 H N N 182
DC HOP2 H N N 183
DC "H5'" H N N 184
DC "H5''" H N N 185
DC "H4'" H N N 186
DC "H3'" H N N 187
DC "HO3'" H N N 188
DC "H2'" H N N 189
DC "H2''" H N N 190
DC "H1'" H N N 191
DC H41 H N N 192
DC H42 H N N 193
DC H5 H N N 194
DC H6 H N N 195
DG OP3 O N N 196
DG P P N N 197
DG OP1 O N N 198
DG OP2 O N N 199
DG "O5'" O N N 200
DG "C5'" C N N 201
DG "C4'" C N R 202
DG "O4'" O N N 203
DG "C3'" C N S 204
DG "O3'" O N N 205
DG "C2'" C N N 206
DG "C1'" C N R 207
DG N9 N Y N 208
DG C8 C Y N 209
DG N7 N Y N 210
DG C5 C Y N 211
DG C6 C N N 212
DG O6 O N N 213
DG N1 N N N 214
DG C2 C N N 215
DG N2 N N N 216
DG N3 N N N 217
DG C4 C Y N 218
DG HOP3 H N N 219
DG HOP2 H N N 220
DG "H5'" H N N 221
DG "H5''" H N N 222
DG "H4'" H N N 223
DG "H3'" H N N 224
DG "HO3'" H N N 225
DG "H2'" H N N 226
DG "H2''" H N N 227
DG "H1'" H N N 228
DG H8 H N N 229
DG H1 H N N 230
DG H21 H N N 231
DG H22 H N N 232
DT OP3 O N N 233
DT P P N N 234
DT OP1 O N N 235
DT OP2 O N N 236
DT "O5'" O N N 237
DT "C5'" C N N 238
DT "C4'" C N R 239
DT "O4'" O N N 240
DT "C3'" C N S 241
DT "O3'" O N N 242
DT "C2'" C N N 243
DT "C1'" C N R 244
DT N1 N N N 245
DT C2 C N N 246
DT O2 O N N 247
DT N3 N N N 248
DT C4 C N N 249
DT O4 O N N 250
DT C5 C N N 251
DT C7 C N N 252
DT C6 C N N 253
DT HOP3 H N N 254
DT HOP2 H N N 255
DT "H5'" H N N 256
DT "H5''" H N N 257
DT "H4'" H N N 258
DT "H3'" H N N 259
DT "HO3'" H N N 260
DT "H2'" H N N 261
DT "H2''" H N N 262
DT "H1'" H N N 263
DT H3 H N N 264
DT H71 H N N 265
DT H72 H N N 266
DT H73 H N N 267
DT H6 H N N 268
ERI O1 O N N 269
ERI C1 C N R 270
ERI C2 C N N 271
ERI C3 C N S 272
ERI O3 O N N 273
ERI CC3 C N N 274
ERI C4 C N S 275
ERI O4 O N N 276
ERI CME C N N 277
ERI CO4 C N N 278
ERI OC4 O N N 279
ERI C5 C N S 280
ERI O5 O N N 281
ERI C6 C N N 282
ERI HO1 H N N 283
ERI H1 H N N 284
ERI H21 H N N 285
ERI H22 H N N 286
ERI HO3 H N N 287
ERI H31 H N N 288
ERI H32 H N N 289
ERI H33 H N N 290
ERI H4 H N N 291
ERI H41 H N N 292
ERI H42 H N N 293
ERI H43 H N N 294
ERI H5 H N N 295
ERI H61 H N N 296
ERI H62 H N N 297
ERI H63 H N N 298
HOH O O N N 299
HOH H1 H N N 300
HOH H2 H N N 301
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
1GL O1 C1 sing N N 1
1GL O1 HO1 sing N N 2
1GL C1 C2 sing N N 3
1GL C1 O5 sing N N 4
1GL C1 H1 sing N N 5
1GL C2 C3 sing N N 6
1GL C2 H2 sing N N 7
1GL C2 H22 sing N N 8
1GL C3 O3 sing N N 9
1GL C3 C4 sing N N 10
1GL C3 H3 sing N N 11
1GL O3 HO3 sing N N 12
1GL C4 O4 sing N N 13
1GL C4 C5 sing N N 14
1GL C4 H4 sing N N 15
1GL O4 CME sing N N 16
1GL CME HM41 sing N N 17
1GL CME HM42 sing N N 18
1GL CME HM43 sing N N 19
1GL C5 O5 sing N N 20
1GL C5 C6 sing N N 21
1GL C5 H5 sing N N 22
1GL C6 H61 sing N N 23
1GL C6 H62 sing N N 24
1GL C6 H63 sing N N 25
ARI O1 C1 sing N N 26
ARI O1 HO1 sing N N 27
ARI C1 C2 sing N N 28
ARI C1 O5 sing N N 29
ARI C1 H1 sing N N 30
ARI C2 C3 sing N N 31
ARI C2 H2 sing N N 32
ARI C2 H22 sing N N 33
ARI C3 C4 sing N N 34
ARI C3 H3 sing N N 35
ARI C3 H32 sing N N 36
ARI C4 O4 sing N N 37
ARI C4 C5 sing N N 38
ARI C4 H4 sing N N 39
ARI O4 CO4 sing N N 40
ARI CME CO4 sing N N 41
ARI CME H41 sing N N 42
ARI CME H42 sing N N 43
ARI CME H43 sing N N 44
ARI CO4 OC4 doub N N 45
ARI C5 O5 sing N N 46
ARI C5 C6 sing N N 47
ARI C5 H5 sing N N 48
ARI C6 H61 sing N N 49
ARI C6 H62 sing N N 50
ARI C6 H63 sing N N 51
CDR O1 C1 sing N N 52
CDR O1 HO1 sing N N 53
CDR C1 C2 sing N N 54
CDR C1 O5 sing N N 55
CDR C1 H1 sing N N 56
CDR C2 C3 sing N N 57
CDR C2 H2 sing N N 58
CDR C2 H22 sing N N 59
CDR C3 C4 sing N N 60
CDR C3 H3 sing N N 61
CDR C3 H32 sing N N 62
CDR C4 O4 sing N N 63
CDR C4 C5 sing N N 64
CDR C4 H4 sing N N 65
CDR O4 HO4 sing N N 66
CDR C5 O5 sing N N 67
CDR C5 C6 sing N N 68
CDR C5 H5 sing N N 69
CDR C6 H61 sing N N 70
CDR C6 H62 sing N N 71
CDR C6 H63 sing N N 72
CRH C1 C2 sing N N 73
CRH C1 C13 sing N N 74
CRH C1 O1 doub N N 75
CRH C2 C3 sing N N 76
CRH C2 H21 sing N N 77
CRH C2 H22 sing N N 78
CRH C3 C4 sing N N 79
CRH C3 "C1'" sing N N 80
CRH C3 H3 sing N N 81
CRH C4 C14 sing N N 82
CRH C4 H41 sing N N 83
CRH C4 H42 sing N N 84
CRH C5 C6 doub Y N 85
CRH C5 C11 sing Y N 86
CRH C5 H5 sing N N 87
CRH C6 C7 sing Y N 88
CRH C6 H6 sing N N 89
CRH C7 C8 doub Y N 90
CRH C7 C15 sing N N 91
CRH C8 C12 sing Y N 92
CRH C8 O8 sing N N 93
CRH C9 C12 doub Y N 94
CRH C9 C13 sing Y N 95
CRH C9 O9 sing N N 96
CRH C10 C11 doub Y N 97
CRH C10 C14 sing Y N 98
CRH C10 H10 sing N N 99
CRH C11 C12 sing Y N 100
CRH C13 C14 doub Y N 101
CRH C15 H151 sing N N 102
CRH C15 H152 sing N N 103
CRH C15 H153 sing N N 104
CRH O8 HO8 sing N N 105
CRH O9 HO9 sing N N 106
CRH "C1'" "C2'" sing N N 107
CRH "C1'" "O1'" sing N N 108
CRH "C1'" "H1'" sing N N 109
CRH "C2'" "C3'" sing N N 110
CRH "C2'" "O2'" doub N N 111
CRH "C3'" "C4'" sing N N 112
CRH "C3'" "O3'" sing N N 113
CRH "C3'" "H3'" sing N N 114
CRH "C4'" C4M sing N N 115
CRH "C4'" "O4'" sing N N 116
CRH "C4'" "H4'" sing N N 117
CRH C1M "O1'" sing N N 118
CRH C1M "H1'1" sing N N 119
CRH C1M "H1'2" sing N N 120
CRH C1M "H1'3" sing N N 121
CRH C4M "H4'1" sing N N 122
CRH C4M "H4'2" sing N N 123
CRH C4M "H4'3" sing N N 124
CRH "O3'" HO3 sing N N 125
CRH "O4'" HO4 sing N N 126
DA OP3 P sing N N 127
DA OP3 HOP3 sing N N 128
DA P OP1 doub N N 129
DA P OP2 sing N N 130
DA P "O5'" sing N N 131
DA OP2 HOP2 sing N N 132
DA "O5'" "C5'" sing N N 133
DA "C5'" "C4'" sing N N 134
DA "C5'" "H5'" sing N N 135
DA "C5'" "H5''" sing N N 136
DA "C4'" "O4'" sing N N 137
DA "C4'" "C3'" sing N N 138
DA "C4'" "H4'" sing N N 139
DA "O4'" "C1'" sing N N 140
DA "C3'" "O3'" sing N N 141
DA "C3'" "C2'" sing N N 142
DA "C3'" "H3'" sing N N 143
DA "O3'" "HO3'" sing N N 144
DA "C2'" "C1'" sing N N 145
DA "C2'" "H2'" sing N N 146
DA "C2'" "H2''" sing N N 147
DA "C1'" N9 sing N N 148
DA "C1'" "H1'" sing N N 149
DA N9 C8 sing Y N 150
DA N9 C4 sing Y N 151
DA C8 N7 doub Y N 152
DA C8 H8 sing N N 153
DA N7 C5 sing Y N 154
DA C5 C6 sing Y N 155
DA C5 C4 doub Y N 156
DA C6 N6 sing N N 157
DA C6 N1 doub Y N 158
DA N6 H61 sing N N 159
DA N6 H62 sing N N 160
DA N1 C2 sing Y N 161
DA C2 N3 doub Y N 162
DA C2 H2 sing N N 163
DA N3 C4 sing Y N 164
DC OP3 P sing N N 165
DC OP3 HOP3 sing N N 166
DC P OP1 doub N N 167
DC P OP2 sing N N 168
DC P "O5'" sing N N 169
DC OP2 HOP2 sing N N 170
DC "O5'" "C5'" sing N N 171
DC "C5'" "C4'" sing N N 172
DC "C5'" "H5'" sing N N 173
DC "C5'" "H5''" sing N N 174
DC "C4'" "O4'" sing N N 175
DC "C4'" "C3'" sing N N 176
DC "C4'" "H4'" sing N N 177
DC "O4'" "C1'" sing N N 178
DC "C3'" "O3'" sing N N 179
DC "C3'" "C2'" sing N N 180
DC "C3'" "H3'" sing N N 181
DC "O3'" "HO3'" sing N N 182
DC "C2'" "C1'" sing N N 183
DC "C2'" "H2'" sing N N 184
DC "C2'" "H2''" sing N N 185
DC "C1'" N1 sing N N 186
DC "C1'" "H1'" sing N N 187
DC N1 C2 sing N N 188
DC N1 C6 sing N N 189
DC C2 O2 doub N N 190
DC C2 N3 sing N N 191
DC N3 C4 doub N N 192
DC C4 N4 sing N N 193
DC C4 C5 sing N N 194
DC N4 H41 sing N N 195
DC N4 H42 sing N N 196
DC C5 C6 doub N N 197
DC C5 H5 sing N N 198
DC C6 H6 sing N N 199
DG OP3 P sing N N 200
DG OP3 HOP3 sing N N 201
DG P OP1 doub N N 202
DG P OP2 sing N N 203
DG P "O5'" sing N N 204
DG OP2 HOP2 sing N N 205
DG "O5'" "C5'" sing N N 206
DG "C5'" "C4'" sing N N 207
DG "C5'" "H5'" sing N N 208
DG "C5'" "H5''" sing N N 209
DG "C4'" "O4'" sing N N 210
DG "C4'" "C3'" sing N N 211
DG "C4'" "H4'" sing N N 212
DG "O4'" "C1'" sing N N 213
DG "C3'" "O3'" sing N N 214
DG "C3'" "C2'" sing N N 215
DG "C3'" "H3'" sing N N 216
DG "O3'" "HO3'" sing N N 217
DG "C2'" "C1'" sing N N 218
DG "C2'" "H2'" sing N N 219
DG "C2'" "H2''" sing N N 220
DG "C1'" N9 sing N N 221
DG "C1'" "H1'" sing N N 222
DG N9 C8 sing Y N 223
DG N9 C4 sing Y N 224
DG C8 N7 doub Y N 225
DG C8 H8 sing N N 226
DG N7 C5 sing Y N 227
DG C5 C6 sing N N 228
DG C5 C4 doub Y N 229
DG C6 O6 doub N N 230
DG C6 N1 sing N N 231
DG N1 C2 sing N N 232
DG N1 H1 sing N N 233
DG C2 N2 sing N N 234
DG C2 N3 doub N N 235
DG N2 H21 sing N N 236
DG N2 H22 sing N N 237
DG N3 C4 sing N N 238
DT OP3 P sing N N 239
DT OP3 HOP3 sing N N 240
DT P OP1 doub N N 241
DT P OP2 sing N N 242
DT P "O5'" sing N N 243
DT OP2 HOP2 sing N N 244
DT "O5'" "C5'" sing N N 245
DT "C5'" "C4'" sing N N 246
DT "C5'" "H5'" sing N N 247
DT "C5'" "H5''" sing N N 248
DT "C4'" "O4'" sing N N 249
DT "C4'" "C3'" sing N N 250
DT "C4'" "H4'" sing N N 251
DT "O4'" "C1'" sing N N 252
DT "C3'" "O3'" sing N N 253
DT "C3'" "C2'" sing N N 254
DT "C3'" "H3'" sing N N 255
DT "O3'" "HO3'" sing N N 256
DT "C2'" "C1'" sing N N 257
DT "C2'" "H2'" sing N N 258
DT "C2'" "H2''" sing N N 259
DT "C1'" N1 sing N N 260
DT "C1'" "H1'" sing N N 261
DT N1 C2 sing N N 262
DT N1 C6 sing N N 263
DT C2 O2 doub N N 264
DT C2 N3 sing N N 265
DT N3 C4 sing N N 266
DT N3 H3 sing N N 267
DT C4 O4 doub N N 268
DT C4 C5 sing N N 269
DT C5 C7 sing N N 270
DT C5 C6 doub N N 271
DT C7 H71 sing N N 272
DT C7 H72 sing N N 273
DT C7 H73 sing N N 274
DT C6 H6 sing N N 275
ERI O1 C1 sing N N 276
ERI O1 HO1 sing N N 277
ERI C1 C2 sing N N 278
ERI C1 O5 sing N N 279
ERI C1 H1 sing N N 280
ERI C2 C3 sing N N 281
ERI C2 H21 sing N N 282
ERI C2 H22 sing N N 283
ERI C3 O3 sing N N 284
ERI C3 CC3 sing N N 285
ERI C3 C4 sing N N 286
ERI O3 HO3 sing N N 287
ERI CC3 H31 sing N N 288
ERI CC3 H32 sing N N 289
ERI CC3 H33 sing N N 290
ERI C4 O4 sing N N 291
ERI C4 C5 sing N N 292
ERI C4 H4 sing N N 293
ERI O4 CO4 sing N N 294
ERI CME CO4 sing N N 295
ERI CME H41 sing N N 296
ERI CME H42 sing N N 297
ERI CME H43 sing N N 298
ERI CO4 OC4 doub N N 299
ERI C5 O5 sing N N 300
ERI C5 C6 sing N N 301
ERI C5 H5 sing N N 302
ERI C6 H61 sing N N 303
ERI C6 H62 sing N N 304
ERI C6 H63 sing N N 305
HOH O H1 sing N N 306
HOH O H2 sing N N 307
#
loop_
_ndb_struct_conf_na.entry_id
_ndb_struct_conf_na.feature
6J0I 'double helix'
6J0I 'a-form double helix'
6J0I 'b-form double helix'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A DT 1 1_555 B DA 8 1_555 -0.387 0.749 -0.258 1.961 -8.979 -9.838 1 A_DT1:DA16_B A 1 ? B 16 ? 20 1
1 A DT 2 1_555 B DA 7 1_555 -0.423 -0.695 -0.939 8.454 -5.830 -7.972 2 A_DT2:DA15_B A 2 ? B 15 ? 20 1
1 A DG 4 1_555 B DC 5 1_555 -0.339 -0.801 0.872 3.241 -8.035 2.609 3 A_DG4:DC13_B A 4 ? B 13 ? 22 1
1 A DC 5 1_555 B DG 4 1_555 0.210 0.431 -0.314 -5.887 0.991 11.196 4 A_DC5:DG12_B A 5 ? B 12 ? 19 1
1 A DG 6 1_555 B DG 3 1_555 0.537 4.192 0.113 6.319 5.998 -80.329 5 A_DG6:DG11_B A 6 ? B 11 ? 6 3
1 A DA 7 1_555 B DT 2 1_555 0.106 -0.456 -0.461 12.012 -11.629 -2.969 6 A_DA7:DT10_B A 7 ? B 10 ? 20 1
1 A DA 8 1_555 B DT 1 1_555 0.494 -0.121 -0.545 0.161 -18.811 -5.843 7 A_DA8:DT9_B A 8 ? B 9 ? 20 1
1 C DT 1 1_555 D DA 8 1_555 -0.266 0.323 -0.714 -7.973 -22.191 -3.721 8 C_DT1:DA16_D C 1 ? D 16 ? 20 1
1 C DT 2 1_555 D DA 7 1_555 0.479 -0.151 -0.366 -1.161 -11.051 6.037 9 C_DT2:DA15_D C 2 ? D 15 ? 20 1
1 C DG 3 1_555 D DG 6 1_555 0.737 3.888 -0.874 4.495 -6.399 -113.359 10 C_DG3:DG14_D C 3 ? D 14 ? ? ?
1 C DG 4 1_555 D DC 5 1_555 -0.386 -0.134 -0.152 -4.870 -3.022 -1.431 11 C_DG4:DC13_D C 4 ? D 13 ? 19 1
1 C DC 5 1_555 D DG 4 1_555 -0.820 0.027 0.332 -5.012 -1.035 10.387 12 C_DC5:DG12_D C 5 ? D 12 ? 19 1
1 C DG 6 1_555 D DG 3 1_555 0.703 3.919 -0.200 12.218 -5.321 -82.062 13 C_DG6:DG11_D C 6 ? D 11 ? 6 3
1 C DA 7 1_555 D DT 2 1_555 0.413 -0.408 -0.380 6.597 -7.791 -11.372 14 C_DA7:DT10_D C 7 ? D 10 ? 20 1
1 C DA 8 1_555 D DT 1 1_555 -0.510 0.773 0.489 0.252 -11.282 -13.409 15 C_DA8:DT9_D C 8 ? D 9 ? ? ?
1 E DT 1 1_555 F DA 8 1_555 0.475 -0.010 0.295 1.531 -13.500 -3.388 16 E_DT1:DA16_F E 1 ? F 16 ? 20 1
1 E DT 2 1_555 F DA 7 1_555 0.084 -0.553 0.278 1.612 -10.671 -5.878 17 E_DT2:DA15_F E 2 ? F 15 ? 20 1
1 E DG 3 1_555 F DG 6 1_555 3.434 2.361 1.142 -14.078 -11.202 -132.833 18 E_DG3:DG14_F E 3 ? F 14 ? ? ?
1 E DG 4 1_555 F DC 5 1_555 0.369 0.253 0.141 -2.418 -7.215 4.928 19 E_DG4:DC13_F E 4 ? F 13 ? 19 1
1 E DC 5 1_555 F DG 4 1_555 0.574 -0.126 0.107 -5.493 -10.156 -6.353 20 E_DC5:DG12_F E 5 ? F 12 ? 19 1
1 E DG 6 1_555 F DG 3 1_555 0.662 4.186 -0.181 -11.741 -1.059 -79.432 21 E_DG6:DG11_F E 6 ? F 11 ? 6 3
1 E DA 7 1_555 F DT 2 1_555 0.473 -0.205 -0.415 -4.354 -9.206 -4.027 22 E_DA7:DT10_F E 7 ? F 10 ? 20 1
1 E DA 8 1_555 F DT 1 1_555 0.348 -0.201 0.471 0.697 -3.089 -0.354 23 E_DA8:DT9_F E 8 ? F 9 ? 20 1
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A DT 1 1_555 B DA 8 1_555 A DT 2 1_555 B DA 7 1_555 0.574 -1.382 3.188 8.709 18.789 35.685 -3.812 0.036 2.290 27.952
-12.957 41.089 1 AA_DT1DT2:DA15DA16_BB A 1 ? B 16 ? A 2 ? B 15 ?
1 A DG 4 1_555 B DC 5 1_555 A DC 5 1_555 B DG 4 1_555 -0.060 -2.333 3.807 8.243 -11.070 32.142 -1.741 1.700 4.220 -18.940
-14.104 34.908 2 AA_DG4DC5:DG12DC13_BB A 4 ? B 13 ? A 5 ? B 12 ?
1 A DC 5 1_555 B DG 4 1_555 A DG 6 1_555 B DG 3 1_555 -0.419 -2.697 3.193 -2.038 3.385 66.235 -2.595 0.305 3.078 3.095
1.863 66.339 3 AA_DC5DG6:DG11DG12_BB A 5 ? B 12 ? A 6 ? B 11 ?
1 A DG 6 1_555 B DG 3 1_555 A DA 7 1_555 B DT 2 1_555 -1.915 1.259 2.837 6.108 16.309 -11.947 -8.849 -3.204 1.195 -52.258
19.573 -21.093 4 AA_DG6DA7:DT10DG11_BB A 6 ? B 11 ? A 7 ? B 10 ?
1 A DA 7 1_555 B DT 2 1_555 A DA 8 1_555 B DT 1 1_555 -0.435 -1.215 3.563 -4.257 12.601 41.042 -2.956 0.153 3.105 17.430
5.888 43.054 5 AA_DA7DA8:DT9DT10_BB A 7 ? B 10 ? A 8 ? B 9 ?
1 A DA 8 1_555 B DT 1 1_555 C DT 1 1_555 D DA 8 1_555 -0.191 -0.846 3.281 2.104 -3.697 24.901 -0.837 1.063 3.342 -8.496
-4.835 25.256 6 AC_DA8DT1:DA16DT9_DB A 8 ? B 9 ? C 1 ? D 16 ?
1 C DT 1 1_555 D DA 8 1_555 C DT 2 1_555 D DA 7 1_555 0.582 -0.224 3.307 -0.645 11.189 42.428 -1.369 -0.842 3.144 15.145
0.873 43.817 7 CC_DT1DT2:DA15DA16_DD C 1 ? D 16 ? C 2 ? D 15 ?
1 C DT 2 1_555 D DA 7 1_555 C DG 3 1_555 D DG 6 1_555 0.798 -1.665 3.169 13.025 5.111 69.743 -1.606 -0.248 3.145 4.425
-11.277 70.958 8 CC_DT2DG3:DG14DA15_DD C 2 ? D 15 ? C 3 ? D 14 ?
1 C DG 3 1_555 D DG 6 1_555 C DG 4 1_555 D DC 5 1_555 0.242 -0.828 3.616 -3.779 7.888 -21.672 -1.071 -0.896 3.674 -19.964
-9.565 -23.351 9 CC_DG3DG4:DC13DG14_DD C 3 ? D 14 ? C 4 ? D 13 ?
1 C DG 4 1_555 D DC 5 1_555 C DC 5 1_555 D DG 4 1_555 0.315 -2.080 3.363 -1.675 -3.290 31.550 -3.162 -0.900 3.535 -6.024
3.067 31.760 10 CC_DG4DC5:DG12DC13_DD C 4 ? D 13 ? C 5 ? D 12 ?
1 C DC 5 1_555 D DG 4 1_555 C DG 6 1_555 D DG 3 1_555 -1.287 -2.211 3.186 -0.667 3.447 70.366 -2.033 1.093 3.099 2.990
0.579 70.442 11 CC_DC5DG6:DG11DG12_DD C 5 ? D 12 ? C 6 ? D 11 ?
1 C DG 6 1_555 D DG 3 1_555 C DA 7 1_555 D DT 2 1_555 -1.935 0.483 3.023 3.525 16.869 -12.363 -7.752 -3.920 1.708 -53.449
11.167 -21.182 12 CC_DG6DA7:DT10DG11_DD C 6 ? D 11 ? C 7 ? D 10 ?
1 C DA 7 1_555 D DT 2 1_555 C DA 8 1_555 D DT 1 1_555 -0.925 -1.239 3.304 -10.875 2.742 32.809 -2.521 -0.191 3.323 4.687
18.589 34.623 13 CC_DA7DA8:DT9DT10_DD C 7 ? D 10 ? C 8 ? D 9 ?
1 C DA 8 1_555 D DT 1 1_555 E DT 1 1_555 F DA 8 1_555 0.483 -1.307 3.200 2.795 -3.450 26.457 -1.917 -0.311 3.372 -7.470
-6.052 26.821 14 CE_DA8DT1:DA16DT9_FD C 8 ? D 9 ? E 1 ? F 16 ?
1 E DT 1 1_555 F DA 8 1_555 E DT 2 1_555 F DA 7 1_555 0.595 -0.968 3.104 3.851 2.828 35.847 -1.937 -0.445 3.067 4.570
-6.222 36.153 15 EE_DT1DT2:DA15DA16_FF E 1 ? F 16 ? E 2 ? F 15 ?
1 E DT 2 1_555 F DA 7 1_555 E DG 3 1_555 F DG 6 1_555 2.963 1.414 -2.559 7.159 -156.158 -98.538 -1.393 1.464 -1.134 80.889
3.708 -164.613 16 EE_DT2DG3:DG14DA15_FF E 2 ? F 15 ? E 3 ? F 14 ?
1 E DG 3 1_555 F DG 6 1_555 E DG 4 1_555 F DC 5 1_555 -3.637 0.853 0.400 -63.288 -149.179 -112.513 -0.375 -1.848 -0.016 75.964
-32.227 -170.057 17 EE_DG3DG4:DC13DG14_FF E 3 ? F 14 ? E 4 ? F 13 ?
1 E DG 4 1_555 F DC 5 1_555 E DC 5 1_555 F DG 4 1_555 -0.573 -2.349 3.475 -0.340 -5.768 33.617 -2.978 0.917 3.819 -9.882
0.582 34.096 18 EE_DG4DC5:DG12DC13_FF E 4 ? F 13 ? E 5 ? F 12 ?
1 E DC 5 1_555 F DG 4 1_555 E DG 6 1_555 F DG 3 1_555 -0.763 -2.836 3.205 4.272 5.117 67.881 -2.712 0.833 2.963 4.571
-3.816 68.168 19 EE_DC5DG6:DG11DG12_FF E 5 ? F 12 ? E 6 ? F 11 ?
1 E DG 6 1_555 F DG 3 1_555 E DA 7 1_555 F DT 2 1_555 -1.396 1.615 3.375 -0.038 10.263 -16.567 -9.291 -4.144 2.028 -31.936
-0.117 -19.469 20 EE_DG6DA7:DT10DG11_FF E 6 ? F 11 ? E 7 ? F 10 ?
1 E DA 7 1_555 F DT 2 1_555 E DA 8 1_555 F DT 1 1_555 -0.519 -1.158 2.938 -8.143 6.139 36.502 -2.486 -0.129 2.763 9.574
12.698 37.853 21 EE_DA7DA8:DT9DT10_FF E 7 ? F 10 ? E 8 ? F 9 ?
#
loop_
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_mon_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.hetero
G 2 ARI 1 G ARI 1 A ARI 102 n
G 2 1GL 2 G 1GL 2 A 1GL 101 n
H 3 CDR 1 H CDR 1 A CDR 104 n
H 3 CDR 2 H CDR 2 A CDR 105 n
H 3 ERI 3 H ERI 3 A ERI 106 n
I 3 CDR 1 I CDR 1 A CDR 107 n
I 3 CDR 2 I CDR 2 A CDR 108 n
I 3 ERI 3 I ERI 3 A ERI 109 n
J 2 ARI 1 J ARI 1 B ARI 102 n
J 2 1GL 2 J 1GL 2 B 1GL 101 n
K 2 ARI 1 K ARI 1 C ARI 102 n
K 2 1GL 2 K 1GL 2 C 1GL 101 n
L 3 CDR 1 L CDR 1 C CDR 104 n
L 3 CDR 2 L CDR 2 C CDR 105 n
L 3 ERI 3 L ERI 3 C ERI 106 n
M 3 CDR 1 M CDR 1 C CDR 107 n
M 3 CDR 2 M CDR 2 C CDR 108 n
M 3 ERI 3 M ERI 3 C ERI 109 n
N 2 ARI 1 N ARI 1 D ARI 102 n
N 2 1GL 2 N 1GL 2 D 1GL 101 n
O 2 ARI 1 O ARI 1 E ARI 102 n
O 2 1GL 2 O 1GL 2 E 1GL 101 n
P 3 CDR 1 P CDR 1 E CDR 104 n
P 3 CDR 2 P CDR 2 E CDR 105 n
P 3 ERI 3 P ERI 3 E ERI 106 n
Q 3 CDR 1 Q CDR 1 E CDR 107 n
Q 3 CDR 2 Q CDR 2 E CDR 108 n
Q 3 ERI 3 Q ERI 3 E ERI 109 n
R 2 ARI 1 R ARI 1 F ARI 102 n
R 2 1GL 2 R 1GL 2 F 1GL 101 n
#
_pdbx_chem_comp_identifier.comp_id 1GL
_pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL'
_pdbx_chem_comp_identifier.program PDB-CARE
_pdbx_chem_comp_identifier.program_version 1.0
_pdbx_chem_comp_identifier.identifier a-D-2-deoxy-Fucp4OMe
#
loop_
_pdbx_entity_branch.entity_id
_pdbx_entity_branch.type
2 oligosaccharide
3 oligosaccharide
#
loop_
_pdbx_entity_branch_descriptor.ordinal
_pdbx_entity_branch_descriptor.entity_id
_pdbx_entity_branch_descriptor.descriptor
_pdbx_entity_branch_descriptor.type
_pdbx_entity_branch_descriptor.program
_pdbx_entity_branch_descriptor.program_version
1 2 'WURCS=2.0/2,2,1/[ad212m-1b_1-5_4*OCC/3=O][ad112m-1a_1-5_4*OC]/1-2/a3-b1' WURCS PDB2Glycan 1.1.0
2 2 '[][b-D-2-deoxy-Fucp4Ac]{[(3+1)][a-D-2-deoxy-Fucp4Me]{}}' LINUCS PDB-CARE ?
3 3 'WURCS=2.0/2,3,2/[ad222m-1b_1-5][ad611m-1a_1-5_3*C_4*OCC/3=O]/1-1-2/a3-b1_b3-c1' WURCS PDB2Glycan 1.1.0
4 3 '[][b-D-2,6-deoxy-Glcp]{[(3+1)][b-D-2,6-deoxy-Glcp]{[(3+1)][a-L-2,6-deoxy-Glcp4Ac]{}}}' LINUCS PDB-CARE ?
#
loop_
_pdbx_entity_branch_link.link_id
_pdbx_entity_branch_link.entity_id
_pdbx_entity_branch_link.entity_branch_list_num_1
_pdbx_entity_branch_link.comp_id_1
_pdbx_entity_branch_link.atom_id_1
_pdbx_entity_branch_link.leaving_atom_id_1
_pdbx_entity_branch_link.entity_branch_list_num_2
_pdbx_entity_branch_link.comp_id_2
_pdbx_entity_branch_link.atom_id_2
_pdbx_entity_branch_link.leaving_atom_id_2
_pdbx_entity_branch_link.value_order
_pdbx_entity_branch_link.details
1 2 1 ARI C3 H3 2 1GL O1 HO1 sing ?
2 3 1 CDR C3 H3 2 CDR O1 HO1 sing ?
3 3 2 CDR C3 H3 3 ERI O1 HO1 sing ?
#
loop_
_pdbx_entity_branch_list.entity_id
_pdbx_entity_branch_list.comp_id
_pdbx_entity_branch_list.num
_pdbx_entity_branch_list.hetero
2 ARI 1 n
2 1GL 2 n
3 CDR 1 n
3 CDR 2 n
3 ERI 3 n
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
4 '1,2-HYDRO-1-OXY-3,4-HYDRO-3-(1-METHOXY-2-OXY-3,4-DIHYDROXYPENTYL)-8,9-DIHYROXY-7-METHYLANTHRACENE' CRH
5 'COBALT (II) ION' CO
6 water HOH
#
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'experimental model'
_pdbx_initial_refinement_model.source_name PDB
_pdbx_initial_refinement_model.accession_code 1VAQ
_pdbx_initial_refinement_model.details ?
#
_pdbx_struct_assembly_auth_evidence.id 1
_pdbx_struct_assembly_auth_evidence.assembly_id 1
_pdbx_struct_assembly_auth_evidence.experimental_support none
_pdbx_struct_assembly_auth_evidence.details ?
#