HEADER PROTEIN BINDING 27-DEC-18 6J0V TITLE CRYSTAL STRUCTURE OF YEAST RTT107 COMPND MOL_ID: 1; COMPND 2 MOLECULE: REGULATOR OF TY1 TRANSPOSITION PROTEIN 107; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: NTD DOMAIN; COMPND 5 SYNONYM: ESTABLISHES SILENT CHROMATIN PROTEIN 4; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / SOURCE 3 S288C); SOURCE 4 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 5 ORGANISM_TAXID: 559292; SOURCE 6 STRAIN: ATCC 204508 / S288C; SOURCE 7 GENE: RTT107, ESC4, YHR154W; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 10 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: PGEX-6P1 KEYWDS BRCT DOMAIN, MITOSIS, PROTEIN INTERACTION, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR B.WAN,J.WU,M.LEI REVDAT 3 27-MAR-24 6J0V 1 REMARK REVDAT 2 26-FEB-20 6J0V 1 JRNL REVDAT 1 14-AUG-19 6J0V 0 JRNL AUTH B.WAN,J.WU,X.MENG,M.LEI,X.ZHAO JRNL TITL MOLECULAR BASIS FOR CONTROL OF DIVERSE GENOME STABILITY JRNL TITL 2 FACTORS BY THE MULTI-BRCT SCAFFOLD RTT107. JRNL REF MOL.CELL V. 75 238 2019 JRNL REFN ISSN 1097-2765 JRNL PMID 31348879 JRNL DOI 10.1016/J.MOLCEL.2019.05.035 REMARK 2 REMARK 2 RESOLUTION. 2.31 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.31 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.45 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 49669 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2482 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.4638 - 6.0600 0.95 2599 156 0.1997 0.2237 REMARK 3 2 6.0600 - 4.8113 0.98 2645 153 0.1870 0.2358 REMARK 3 3 4.8113 - 4.2035 0.98 2637 144 0.1684 0.2289 REMARK 3 4 4.2035 - 3.8193 0.98 2644 140 0.1915 0.2100 REMARK 3 5 3.8193 - 3.5456 0.99 2688 126 0.2073 0.2742 REMARK 3 6 3.5456 - 3.3366 0.98 2649 126 0.2229 0.2646 REMARK 3 7 3.3366 - 3.1696 0.99 2682 121 0.2276 0.3335 REMARK 3 8 3.1696 - 3.0316 0.99 2637 145 0.2403 0.3161 REMARK 3 9 3.0316 - 2.9149 0.99 2621 146 0.2365 0.2763 REMARK 3 10 2.9149 - 2.8144 0.99 2686 140 0.2299 0.3034 REMARK 3 11 2.8144 - 2.7264 0.98 2619 142 0.2397 0.2875 REMARK 3 12 2.7264 - 2.6484 0.99 2651 139 0.2456 0.3104 REMARK 3 13 2.6484 - 2.5787 0.98 2614 152 0.2791 0.4345 REMARK 3 14 2.5787 - 2.5158 0.98 2641 135 0.2951 0.3912 REMARK 3 15 2.5158 - 2.4586 0.98 2654 122 0.2935 0.3375 REMARK 3 16 2.4586 - 2.4063 0.98 2600 125 0.3023 0.4029 REMARK 3 17 2.4063 - 2.3582 0.98 2645 129 0.3135 0.3535 REMARK 3 18 2.3582 - 2.3137 0.86 2275 141 0.3145 0.3524 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.380 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.060 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 52.55 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 71.79 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 2:485 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.924 79.063 112.986 REMARK 3 T TENSOR REMARK 3 T11: 0.1897 T22: 0.2971 REMARK 3 T33: 0.2681 T12: 0.0835 REMARK 3 T13: 0.0358 T23: -0.0001 REMARK 3 L TENSOR REMARK 3 L11: 0.3888 L22: 2.2272 REMARK 3 L33: 1.6454 L12: -0.1653 REMARK 3 L13: -0.0459 L23: 1.1170 REMARK 3 S TENSOR REMARK 3 S11: -0.1159 S12: -0.0186 S13: 0.0725 REMARK 3 S21: -0.0792 S22: 0.2929 S23: -0.1162 REMARK 3 S31: -0.1017 S32: -0.0208 S33: 0.0158 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN B AND RESID 2:484 ) REMARK 3 ORIGIN FOR THE GROUP (A): 60.346 80.075 151.681 REMARK 3 T TENSOR REMARK 3 T11: 0.4274 T22: 0.4135 REMARK 3 T33: 0.3893 T12: -0.1380 REMARK 3 T13: -0.0919 T23: 0.1714 REMARK 3 L TENSOR REMARK 3 L11: 1.7684 L22: 1.8961 REMARK 3 L33: 0.7286 L12: 1.0620 REMARK 3 L13: -0.2316 L23: 0.2141 REMARK 3 S TENSOR REMARK 3 S11: -0.2160 S12: 0.2085 S13: 0.0701 REMARK 3 S21: -0.1381 S22: 0.5254 S23: 0.4083 REMARK 3 S31: 0.2417 S32: -0.3205 S33: 0.0243 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 601:670 ) OR ( CHAIN B AND RESID REMARK 3 601:652 ) REMARK 3 ORIGIN FOR THE GROUP (A): 47.581 76.507 126.898 REMARK 3 T TENSOR REMARK 3 T11: 0.3666 T22: 0.3749 REMARK 3 T33: 0.3549 T12: 0.0573 REMARK 3 T13: 0.0179 T23: -0.0183 REMARK 3 L TENSOR REMARK 3 L11: -0.0302 L22: 0.3387 REMARK 3 L33: 0.2318 L12: 0.2044 REMARK 3 L13: -0.0229 L23: -0.0887 REMARK 3 S TENSOR REMARK 3 S11: -0.0077 S12: 0.0067 S13: -0.0833 REMARK 3 S21: -0.0116 S22: 0.0347 S23: 0.0675 REMARK 3 S31: -0.1439 S32: 0.0065 S33: -0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6J0V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-JAN-19. REMARK 100 THE DEPOSITION ID IS D_1300010265. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-DEC-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97855 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.21 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49735 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.310 REMARK 200 RESOLUTION RANGE LOW (A) : 98.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.31 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.39 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 1.13000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.69 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.8M AMMONIUM SULFATE, 50MM SODIUM REMARK 280 CACODYLATE PH 5.8, 5 MM MAGNESIUM ACETATE, 0.5MM SPERMINE, REMARK 280 EVAPORATION, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 49.45250 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 179 REMARK 465 LEU A 180 REMARK 465 THR A 181 REMARK 465 PHE A 182 REMARK 465 GLY A 183 REMARK 465 SER A 184 REMARK 465 PHE A 185 REMARK 465 SER A 186 REMARK 465 SER A 187 REMARK 465 SER A 188 REMARK 465 SER A 189 REMARK 465 THR A 190 REMARK 465 ASN A 191 REMARK 465 LYS A 192 REMARK 465 HIS A 193 REMARK 465 THR A 194 REMARK 465 GLU A 195 REMARK 465 LYS A 196 REMARK 465 PRO A 197 REMARK 465 LEU A 198 REMARK 465 ARG A 199 REMARK 465 LYS A 250 REMARK 465 GLN A 251 REMARK 465 THR A 252 REMARK 465 HIS A 486 REMARK 465 SER A 487 REMARK 465 SER A 488 REMARK 465 LEU A 489 REMARK 465 PRO A 490 REMARK 465 THR A 491 REMARK 465 PRO A 492 REMARK 465 LYS A 493 REMARK 465 ASN A 494 REMARK 465 LEU A 495 REMARK 465 SER A 496 REMARK 465 MET A 497 REMARK 465 VAL A 498 REMARK 465 THR A 499 REMARK 465 TYR A 500 REMARK 465 ASP A 501 REMARK 465 THR A 502 REMARK 465 GLN A 503 REMARK 465 SER A 504 REMARK 465 ILE A 505 REMARK 465 SER A 506 REMARK 465 GLU A 507 REMARK 465 LYS A 508 REMARK 465 PRO A 509 REMARK 465 PRO A 510 REMARK 465 PRO A 511 REMARK 465 THR A 512 REMARK 465 ASN A 513 REMARK 465 MET B 1 REMARK 465 LYS B 179 REMARK 465 LEU B 180 REMARK 465 THR B 181 REMARK 465 PHE B 182 REMARK 465 GLY B 183 REMARK 465 SER B 184 REMARK 465 PHE B 185 REMARK 465 SER B 186 REMARK 465 SER B 187 REMARK 465 SER B 188 REMARK 465 SER B 189 REMARK 465 THR B 190 REMARK 465 ASN B 191 REMARK 465 LYS B 192 REMARK 465 HIS B 193 REMARK 465 THR B 194 REMARK 465 GLU B 195 REMARK 465 LYS B 196 REMARK 465 PRO B 197 REMARK 465 LEU B 198 REMARK 465 ARG B 199 REMARK 465 LYS B 250 REMARK 465 GLN B 251 REMARK 465 THR B 252 REMARK 465 SER B 253 REMARK 465 SER B 254 REMARK 465 SER B 255 REMARK 465 GLN B 256 REMARK 465 LEU B 257 REMARK 465 ASP B 485 REMARK 465 HIS B 486 REMARK 465 SER B 487 REMARK 465 SER B 488 REMARK 465 LEU B 489 REMARK 465 PRO B 490 REMARK 465 THR B 491 REMARK 465 PRO B 492 REMARK 465 LYS B 493 REMARK 465 ASN B 494 REMARK 465 LEU B 495 REMARK 465 SER B 496 REMARK 465 MET B 497 REMARK 465 VAL B 498 REMARK 465 THR B 499 REMARK 465 TYR B 500 REMARK 465 ASP B 501 REMARK 465 THR B 502 REMARK 465 GLN B 503 REMARK 465 SER B 504 REMARK 465 ILE B 505 REMARK 465 SER B 506 REMARK 465 GLU B 507 REMARK 465 LYS B 508 REMARK 465 PRO B 509 REMARK 465 PRO B 510 REMARK 465 PRO B 511 REMARK 465 THR B 512 REMARK 465 ASN B 513 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP B 101 O HOH B 601 1.98 REMARK 500 SG CYS A 37 SG CYS A 40 2.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 4 -179.84 -172.14 REMARK 500 SER A 36 32.31 77.83 REMARK 500 ASN A 38 -79.23 -76.44 REMARK 500 ASN A 49 88.80 -69.30 REMARK 500 ASP A 56 -167.37 -104.21 REMARK 500 ASP A 88 -70.65 -86.01 REMARK 500 SER A 235 -158.49 -104.23 REMARK 500 HIS A 260 78.25 -114.96 REMARK 500 PHE A 280 120.47 -35.19 REMARK 500 CYS A 363 -155.92 -94.85 REMARK 500 THR A 411 -165.71 -117.54 REMARK 500 PHE B 7 33.22 -88.00 REMARK 500 SER B 36 26.19 83.96 REMARK 500 ASP B 88 -74.61 -79.69 REMARK 500 VAL B 177 -80.82 -70.64 REMARK 500 ALA B 216 69.05 34.01 REMARK 500 LYS B 217 144.46 -175.70 REMARK 500 PHE B 280 126.27 -39.85 REMARK 500 CYS B 363 -159.02 -106.81 REMARK 500 THR B 422 46.81 -108.56 REMARK 500 ASP B 463 151.49 -49.28 REMARK 500 ASN B 468 107.23 -54.16 REMARK 500 ASN B 478 139.52 -36.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PHE A 279 PHE A 280 149.47 REMARK 500 REMARK 500 REMARK: NULL DBREF 6J0V A 1 513 UNP P38850 RT107_YEAST 1 513 DBREF 6J0V B 1 513 UNP P38850 RT107_YEAST 1 513 SEQRES 1 A 513 MET SER THR SER LEU LEU PHE GLU GLN LEU ASN PHE LEU SEQRES 2 A 513 ILE LEU VAL ALA ALA GLU ALA GLU LEU PRO ILE ALA HIS SEQRES 3 A 513 SER THR ARG LYS LEU LEU MET ASP ASN SER CYS ASN ASN SEQRES 4 A 513 CYS GLN ILE TYR GLU LEU TYR ASN GLU ASN LEU LYS ASP SEQRES 5 A 513 VAL LYS THR ASP LYS ASP TRP PHE MET ASN LYS PHE GLY SEQRES 6 A 513 PRO GLN THR VAL HIS PHE VAL ILE SER ASN THR ILE ASN SEQRES 7 A 513 PHE PRO PHE TYR LYS ILE VAL TYR PHE ASP LEU LEU ILE SEQRES 8 A 513 PRO VAL VAL SER HIS THR TRP VAL GLN ASP SER VAL LYS SEQRES 9 A 513 THR LYS ARG HIS LEU ARG THR ASN MET TYR SER PRO ASN SEQRES 10 A 513 PRO PHE HIS LEU LEU ARG ASP CYS GLN VAL TYR ILE SER SEQRES 11 A 513 LYS SER SER PHE ASN LYS CYS GLU TYR ILE LEU TYR SER SEQRES 12 A 513 ASP LEU LEU HIS LEU LEU GLY GLY THR LEU VAL ASN TYR SEQRES 13 A 513 ILE SER ASN ARG THR THR HIS VAL ILE VAL GLN SER PRO SEQRES 14 A 513 GLN ASP PRO ILE ILE ALA THR VAL SER LYS LEU THR PHE SEQRES 15 A 513 GLY SER PHE SER SER SER SER THR ASN LYS HIS THR GLU SEQRES 16 A 513 LYS PRO LEU ARG GLU TRP LYS PHE VAL TYR PRO ILE TRP SEQRES 17 A 513 ILE LEU TYR HIS PHE LYS MET ALA LYS PRO LEU LYS GLY SEQRES 18 A 513 GLU LEU ALA THR LEU CYS GLU LEU ASP MET GLN ASP THR SEQRES 19 A 513 SER GLU GLU GLN LEU PHE ALA LYS TRP GLU GLU VAL ILE SEQRES 20 A 513 GLY ASP LYS GLN THR SER SER SER GLN LEU THR LEU HIS SEQRES 21 A 513 PRO ASN LYS THR LEU PHE LYS ASN HIS HIS PHE ALA ILE SEQRES 22 A 513 SER PRO ASP LEU ASN PHE PHE THR PRO LEU TYR TRP PHE SEQRES 23 A 513 LEU LYS GLY PHE ILE GLU ASP LEU ASP GLY LYS VAL THR SEQRES 24 A 513 PRO LEU SER PHE SER ASP ASP LEU LYS SER VAL TYR GLN SEQRES 25 A 513 ALA PHE PRO ASP ILE ASP CYS TYR ILE GLY HIS SER ALA SEQRES 26 A 513 ASN SER PRO ILE LEU GLU LYS THR LYS SER ILE LYS PRO SEQRES 27 A 513 GLU ILE HIS VAL GLY ASN VAL SER TRP LEU PHE TYR MET SEQRES 28 A 513 PHE ALA LEU GLN LYS PHE THR PRO VAL SER GLN CYS LYS SEQRES 29 A 513 LEU ILE HIS GLN PRO PHE HIS ALA LYS LEU PHE THR SER SEQRES 30 A 513 LYS GLU LEU THR VAL ALA TYR THR ASN TYR PHE GLY SER SEQRES 31 A 513 GLN ARG PHE TYR ILE GLN ARG LEU VAL GLU ILE LEU GLY SEQRES 32 A 513 GLY LEU SER THR PRO GLU LEU THR ARG LYS ASN THR HIS SEQRES 33 A 513 LEU ILE THR LYS SER THR ILE GLY LYS LYS PHE LYS VAL SEQRES 34 A 513 ALA LYS LYS TRP SER LEU ASP PRO GLN ASN ALA ILE ILE SEQRES 35 A 513 VAL THR ASN HIS MET TRP LEU GLU GLN CYS TYR MET ASN SEQRES 36 A 513 ASN SER LYS LEU ASN PRO LYS ASP SER ARG PHE GLN ASN SEQRES 37 A 513 PHE LYS LEU ASP ASP ASN MET GLY TRP ASN ILE GLY GLN SEQRES 38 A 513 ILE GLY MET ASP HIS SER SER LEU PRO THR PRO LYS ASN SEQRES 39 A 513 LEU SER MET VAL THR TYR ASP THR GLN SER ILE SER GLU SEQRES 40 A 513 LYS PRO PRO PRO THR ASN SEQRES 1 B 513 MET SER THR SER LEU LEU PHE GLU GLN LEU ASN PHE LEU SEQRES 2 B 513 ILE LEU VAL ALA ALA GLU ALA GLU LEU PRO ILE ALA HIS SEQRES 3 B 513 SER THR ARG LYS LEU LEU MET ASP ASN SER CYS ASN ASN SEQRES 4 B 513 CYS GLN ILE TYR GLU LEU TYR ASN GLU ASN LEU LYS ASP SEQRES 5 B 513 VAL LYS THR ASP LYS ASP TRP PHE MET ASN LYS PHE GLY SEQRES 6 B 513 PRO GLN THR VAL HIS PHE VAL ILE SER ASN THR ILE ASN SEQRES 7 B 513 PHE PRO PHE TYR LYS ILE VAL TYR PHE ASP LEU LEU ILE SEQRES 8 B 513 PRO VAL VAL SER HIS THR TRP VAL GLN ASP SER VAL LYS SEQRES 9 B 513 THR LYS ARG HIS LEU ARG THR ASN MET TYR SER PRO ASN SEQRES 10 B 513 PRO PHE HIS LEU LEU ARG ASP CYS GLN VAL TYR ILE SER SEQRES 11 B 513 LYS SER SER PHE ASN LYS CYS GLU TYR ILE LEU TYR SER SEQRES 12 B 513 ASP LEU LEU HIS LEU LEU GLY GLY THR LEU VAL ASN TYR SEQRES 13 B 513 ILE SER ASN ARG THR THR HIS VAL ILE VAL GLN SER PRO SEQRES 14 B 513 GLN ASP PRO ILE ILE ALA THR VAL SER LYS LEU THR PHE SEQRES 15 B 513 GLY SER PHE SER SER SER SER THR ASN LYS HIS THR GLU SEQRES 16 B 513 LYS PRO LEU ARG GLU TRP LYS PHE VAL TYR PRO ILE TRP SEQRES 17 B 513 ILE LEU TYR HIS PHE LYS MET ALA LYS PRO LEU LYS GLY SEQRES 18 B 513 GLU LEU ALA THR LEU CYS GLU LEU ASP MET GLN ASP THR SEQRES 19 B 513 SER GLU GLU GLN LEU PHE ALA LYS TRP GLU GLU VAL ILE SEQRES 20 B 513 GLY ASP LYS GLN THR SER SER SER GLN LEU THR LEU HIS SEQRES 21 B 513 PRO ASN LYS THR LEU PHE LYS ASN HIS HIS PHE ALA ILE SEQRES 22 B 513 SER PRO ASP LEU ASN PHE PHE THR PRO LEU TYR TRP PHE SEQRES 23 B 513 LEU LYS GLY PHE ILE GLU ASP LEU ASP GLY LYS VAL THR SEQRES 24 B 513 PRO LEU SER PHE SER ASP ASP LEU LYS SER VAL TYR GLN SEQRES 25 B 513 ALA PHE PRO ASP ILE ASP CYS TYR ILE GLY HIS SER ALA SEQRES 26 B 513 ASN SER PRO ILE LEU GLU LYS THR LYS SER ILE LYS PRO SEQRES 27 B 513 GLU ILE HIS VAL GLY ASN VAL SER TRP LEU PHE TYR MET SEQRES 28 B 513 PHE ALA LEU GLN LYS PHE THR PRO VAL SER GLN CYS LYS SEQRES 29 B 513 LEU ILE HIS GLN PRO PHE HIS ALA LYS LEU PHE THR SER SEQRES 30 B 513 LYS GLU LEU THR VAL ALA TYR THR ASN TYR PHE GLY SER SEQRES 31 B 513 GLN ARG PHE TYR ILE GLN ARG LEU VAL GLU ILE LEU GLY SEQRES 32 B 513 GLY LEU SER THR PRO GLU LEU THR ARG LYS ASN THR HIS SEQRES 33 B 513 LEU ILE THR LYS SER THR ILE GLY LYS LYS PHE LYS VAL SEQRES 34 B 513 ALA LYS LYS TRP SER LEU ASP PRO GLN ASN ALA ILE ILE SEQRES 35 B 513 VAL THR ASN HIS MET TRP LEU GLU GLN CYS TYR MET ASN SEQRES 36 B 513 ASN SER LYS LEU ASN PRO LYS ASP SER ARG PHE GLN ASN SEQRES 37 B 513 PHE LYS LEU ASP ASP ASN MET GLY TRP ASN ILE GLY GLN SEQRES 38 B 513 ILE GLY MET ASP HIS SER SER LEU PRO THR PRO LYS ASN SEQRES 39 B 513 LEU SER MET VAL THR TYR ASP THR GLN SER ILE SER GLU SEQRES 40 B 513 LYS PRO PRO PRO THR ASN FORMUL 3 HOH *122(H2 O) HELIX 1 AA1 ALA A 18 ALA A 20 5 3 HELIX 2 AA2 GLU A 21 ASN A 35 1 15 HELIX 3 AA3 ASP A 56 GLY A 65 1 10 HELIX 4 AA4 PHE A 81 PHE A 87 1 7 HELIX 5 AA5 SER A 95 LYS A 106 1 12 HELIX 6 AA6 THR A 111 SER A 115 5 5 HELIX 7 AA7 ASN A 135 LEU A 149 1 15 HELIX 8 AA8 ASP A 171 SER A 178 1 8 HELIX 9 AA9 PRO A 206 ALA A 216 1 11 HELIX 10 AB1 GLY A 221 CYS A 227 1 7 HELIX 11 AB2 GLU A 236 GLY A 248 1 13 HELIX 12 AB3 GLN A 256 HIS A 260 5 5 HELIX 13 AB4 PHE A 280 LEU A 294 1 15 HELIX 14 AB5 ASP A 306 PHE A 314 1 9 HELIX 15 AB6 SER A 327 LYS A 337 1 11 HELIX 16 AB7 ASN A 344 GLN A 355 1 12 HELIX 17 AB8 PRO A 359 CYS A 363 5 5 HELIX 18 AB9 LYS A 364 GLN A 368 5 5 HELIX 19 AC1 GLY A 389 GLY A 403 1 15 HELIX 20 AC2 GLY A 424 LEU A 435 1 12 HELIX 21 AC3 ASN A 445 ASN A 456 1 12 HELIX 22 AC4 ASP A 463 GLN A 467 5 5 HELIX 23 AC5 LYS A 470 ASN A 478 5 9 HELIX 24 AC6 ALA B 18 ALA B 20 5 3 HELIX 25 AC7 GLU B 21 ASN B 35 1 15 HELIX 26 AC8 ASP B 56 GLY B 65 1 10 HELIX 27 AC9 PHE B 81 PHE B 87 1 7 HELIX 28 AD1 HIS B 96 LYS B 106 1 11 HELIX 29 AD2 THR B 111 SER B 115 5 5 HELIX 30 AD3 LYS B 131 PHE B 134 5 4 HELIX 31 AD4 ASN B 135 LEU B 149 1 15 HELIX 32 AD5 PRO B 172 SER B 178 1 7 HELIX 33 AD6 PRO B 206 ALA B 216 1 11 HELIX 34 AD7 SER B 235 GLY B 248 1 14 HELIX 35 AD8 PHE B 280 LEU B 294 1 15 HELIX 36 AD9 ASP B 306 PHE B 314 1 9 HELIX 37 AE1 SER B 327 LYS B 337 1 11 HELIX 38 AE2 ASN B 344 GLN B 355 1 12 HELIX 39 AE3 PRO B 359 CYS B 363 5 5 HELIX 40 AE4 LYS B 364 GLN B 368 5 5 HELIX 41 AE5 GLY B 389 GLY B 403 1 15 HELIX 42 AE6 ILE B 423 ASP B 436 1 14 HELIX 43 AE7 ASN B 445 ASN B 455 1 11 HELIX 44 AE8 ASP B 463 GLN B 467 5 5 HELIX 45 AE9 LYS B 470 ASN B 478 5 9 SHEET 1 AA1 4 CYS A 40 GLU A 44 0 SHEET 2 AA1 4 PHE A 12 VAL A 16 1 N ILE A 14 O GLN A 41 SHEET 3 AA1 4 PHE A 71 ILE A 73 1 O ILE A 73 N LEU A 13 SHEET 4 AA1 4 VAL A 93 VAL A 94 1 O VAL A 94 N VAL A 72 SHEET 1 AA2 4 THR A 152 VAL A 154 0 SHEET 2 AA2 4 GLN A 126 ILE A 129 1 N VAL A 127 O THR A 152 SHEET 3 AA2 4 HIS A 163 ILE A 165 1 O HIS A 163 N TYR A 128 SHEET 4 AA2 4 LYS A 202 VAL A 204 1 O LYS A 202 N VAL A 164 SHEET 1 AA3 4 LYS A 297 PRO A 300 0 SHEET 2 AA3 4 HIS A 270 ILE A 273 1 N PHE A 271 O LYS A 297 SHEET 3 AA3 4 CYS A 319 ILE A 321 1 O ILE A 321 N ALA A 272 SHEET 4 AA3 4 HIS A 341 GLY A 343 1 O HIS A 341 N TYR A 320 SHEET 1 AA4 4 LEU A 405 THR A 407 0 SHEET 2 AA4 4 THR A 381 THR A 385 1 N VAL A 382 O LEU A 405 SHEET 3 AA4 4 HIS A 416 THR A 419 1 O ILE A 418 N ALA A 383 SHEET 4 AA4 4 ILE A 442 THR A 444 1 O ILE A 442 N LEU A 417 SHEET 1 AA5 4 ASN B 39 GLU B 44 0 SHEET 2 AA5 4 ASN B 11 VAL B 16 1 N ILE B 14 O GLN B 41 SHEET 3 AA5 4 PHE B 71 ILE B 73 1 O ILE B 73 N LEU B 13 SHEET 4 AA5 4 VAL B 93 VAL B 94 1 O VAL B 94 N VAL B 72 SHEET 1 AA6 4 THR B 152 VAL B 154 0 SHEET 2 AA6 4 GLN B 126 ILE B 129 1 N VAL B 127 O THR B 152 SHEET 3 AA6 4 HIS B 163 ILE B 165 1 O HIS B 163 N TYR B 128 SHEET 4 AA6 4 LYS B 202 VAL B 204 1 O VAL B 204 N VAL B 164 SHEET 1 AA7 4 LYS B 297 PRO B 300 0 SHEET 2 AA7 4 HIS B 270 ILE B 273 1 N PHE B 271 O LYS B 297 SHEET 3 AA7 4 ILE B 317 ILE B 321 1 O CYS B 319 N ALA B 272 SHEET 4 AA7 4 HIS B 341 GLY B 343 1 O HIS B 341 N ASP B 318 SHEET 1 AA8 4 LEU B 405 SER B 406 0 SHEET 2 AA8 4 THR B 381 TYR B 384 1 N VAL B 382 O LEU B 405 SHEET 3 AA8 4 HIS B 416 ILE B 418 1 O ILE B 418 N ALA B 383 SHEET 4 AA8 4 ILE B 442 THR B 444 1 O THR B 444 N LEU B 417 CISPEP 1 GLY A 65 PRO A 66 0 4.17 CISPEP 2 GLY B 65 PRO B 66 0 2.83 CRYST1 72.404 98.905 87.464 90.00 108.97 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013811 0.000000 0.004747 0.00000 SCALE2 0.000000 0.010111 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012090 0.00000