HEADER PROTEIN BINDING 27-DEC-18 6J0W TITLE CRYSTAL STRUCTURE OF YEAST RTT107 AND NSE6 COMPND MOL_ID: 1; COMPND 2 MOLECULE: REGULATOR OF TY1 TRANSPOSITION PROTEIN 107; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: NTD DOMAIN; COMPND 5 SYNONYM: ESTABLISHES SILENT CHROMATIN PROTEIN 4; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: PEPTIDE FROM DNA REPAIR PROTEIN KRE29; COMPND 9 CHAIN: C, D; COMPND 10 FRAGMENT: RTT107 INTERACTING MOTIF; COMPND 11 SYNONYM: KILLER TOXIN-RESISTANCE PROTEIN 29; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / SOURCE 3 S288C); SOURCE 4 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 5 ORGANISM_TAXID: 559292; SOURCE 6 STRAIN: ATCC 204508 / S288C; SOURCE 7 GENE: RTT107, ESC4, YHR154W; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 10 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: PGEX-6P1; SOURCE 13 MOL_ID: 2; SOURCE 14 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / SOURCE 15 S288C); SOURCE 16 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 17 ORGANISM_TAXID: 559292; SOURCE 18 STRAIN: ATCC 204508 / S288C; SOURCE 19 GENE: KRE29, YER038C; SOURCE 20 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 21 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 22 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 23 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 24 EXPRESSION_SYSTEM_PLASMID: PGEX-6P1 KEYWDS BRCT DOMAIN, MITOSIS, PROTEIN INTERACTION, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR B.WAN,J.WU,M.LEI REVDAT 3 22-NOV-23 6J0W 1 REMARK REVDAT 2 26-FEB-20 6J0W 1 JRNL REVDAT 1 14-AUG-19 6J0W 0 JRNL AUTH B.WAN,J.WU,X.MENG,M.LEI,X.ZHAO JRNL TITL MOLECULAR BASIS FOR CONTROL OF DIVERSE GENOME STABILITY JRNL TITL 2 FACTORS BY THE MULTI-BRCT SCAFFOLD RTT107. JRNL REF MOL.CELL V. 75 238 2019 JRNL REFN ISSN 1097-2765 JRNL PMID 31348879 JRNL DOI 10.1016/J.MOLCEL.2019.05.035 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.71 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.910 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 45851 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.221 REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.271 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2248 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.7150 - 6.0433 0.98 2746 143 0.1939 0.2313 REMARK 3 2 6.0433 - 4.7984 1.00 2749 135 0.1903 0.2112 REMARK 3 3 4.7984 - 4.1923 0.99 2725 161 0.1707 0.2029 REMARK 3 4 4.1923 - 3.8092 0.99 2705 146 0.2007 0.2575 REMARK 3 5 3.8092 - 3.5363 0.99 2718 151 0.2207 0.2715 REMARK 3 6 3.5363 - 3.3279 1.00 2709 133 0.2251 0.2900 REMARK 3 7 3.3279 - 3.1612 1.00 2730 154 0.2299 0.3071 REMARK 3 8 3.1612 - 3.0237 1.00 2719 133 0.2300 0.2610 REMARK 3 9 3.0237 - 2.9073 1.00 2731 129 0.2481 0.3412 REMARK 3 10 2.9073 - 2.8070 1.00 2767 128 0.2527 0.3610 REMARK 3 11 2.8070 - 2.7192 1.00 2712 130 0.2556 0.3238 REMARK 3 12 2.7192 - 2.6415 1.00 2711 143 0.2615 0.3753 REMARK 3 13 2.6415 - 2.5720 1.00 2721 142 0.2692 0.3433 REMARK 3 14 2.5720 - 2.5092 1.00 2734 144 0.2767 0.3378 REMARK 3 15 2.5092 - 2.4522 1.00 2714 131 0.2761 0.3412 REMARK 3 16 2.4522 - 2.4000 1.00 2712 145 0.3020 0.3721 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.390 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.350 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 41.97 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 2:484 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.445 79.798 112.105 REMARK 3 T TENSOR REMARK 3 T11: 0.0383 T22: 0.0942 REMARK 3 T33: 0.1017 T12: 0.0361 REMARK 3 T13: 0.0163 T23: 0.0059 REMARK 3 L TENSOR REMARK 3 L11: 0.0196 L22: 1.2376 REMARK 3 L33: 1.0988 L12: -0.0883 REMARK 3 L13: 0.0070 L23: 0.8667 REMARK 3 S TENSOR REMARK 3 S11: -0.1033 S12: 0.0495 S13: 0.0017 REMARK 3 S21: -0.0466 S22: 0.1744 S23: 0.0035 REMARK 3 S31: -0.0928 S32: 0.0264 S33: -0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN B AND RESID 2:484 ) REMARK 3 ORIGIN FOR THE GROUP (A): 61.817 80.496 149.093 REMARK 3 T TENSOR REMARK 3 T11: 0.1874 T22: 0.2241 REMARK 3 T33: 0.2129 T12: -0.0325 REMARK 3 T13: 0.0126 T23: 0.0864 REMARK 3 L TENSOR REMARK 3 L11: 0.5636 L22: 0.8200 REMARK 3 L33: 0.6724 L12: 0.2084 REMARK 3 L13: 0.5967 L23: 0.2779 REMARK 3 S TENSOR REMARK 3 S11: 0.0562 S12: -0.0348 S13: -0.0362 REMARK 3 S21: 0.0609 S22: 0.1419 S23: 0.1692 REMARK 3 S31: 0.0754 S32: -0.1057 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN C AND RESID 13:39 ) REMARK 3 ORIGIN FOR THE GROUP (A): 54.340 86.737 99.944 REMARK 3 T TENSOR REMARK 3 T11: 0.6700 T22: 0.5171 REMARK 3 T33: 0.4886 T12: -0.1182 REMARK 3 T13: 0.0486 T23: 0.0169 REMARK 3 L TENSOR REMARK 3 L11: -0.0100 L22: 0.0077 REMARK 3 L33: 0.0013 L12: -0.0091 REMARK 3 L13: 0.0183 L23: -0.0135 REMARK 3 S TENSOR REMARK 3 S11: -0.1156 S12: 0.1500 S13: 0.0150 REMARK 3 S21: 0.0108 S22: -0.0855 S23: -0.1001 REMARK 3 S31: -0.2398 S32: 0.0633 S33: -0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN D AND RESID 13:41 ) REMARK 3 ORIGIN FOR THE GROUP (A): 77.701 73.233 145.463 REMARK 3 T TENSOR REMARK 3 T11: 0.6738 T22: 0.5606 REMARK 3 T33: 0.5490 T12: -0.0639 REMARK 3 T13: -0.0488 T23: -0.1548 REMARK 3 L TENSOR REMARK 3 L11: 0.0211 L22: 0.0429 REMARK 3 L33: 0.0155 L12: -0.0705 REMARK 3 L13: -0.0068 L23: -0.0636 REMARK 3 S TENSOR REMARK 3 S11: -0.0538 S12: -0.0069 S13: -0.1602 REMARK 3 S21: -0.1747 S22: 0.1126 S23: -0.0052 REMARK 3 S31: 0.2478 S32: -0.1984 S33: 0.0000 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN A AND RESID 601:626 ) OR ( CHAIN C AND RESID REMARK 3 101:102 ) OR ( CHAIN B AND RESID 601:618 ) OR ( REMARK 3 CHAIN D AND RESID 101:104 ) REMARK 3 ORIGIN FOR THE GROUP (A): 52.862 78.630 131.376 REMARK 3 T TENSOR REMARK 3 T11: -0.1469 T22: 0.1795 REMARK 3 T33: 0.1367 T12: -0.0720 REMARK 3 T13: 0.0590 T23: 0.0139 REMARK 3 L TENSOR REMARK 3 L11: -0.0249 L22: 0.0221 REMARK 3 L33: 0.0109 L12: -0.0835 REMARK 3 L13: 0.0512 L23: -0.0014 REMARK 3 S TENSOR REMARK 3 S11: -0.1410 S12: 0.0012 S13: 0.0636 REMARK 3 S21: 0.2229 S22: 0.0839 S23: 0.0227 REMARK 3 S31: -0.0954 S32: -0.0753 S33: -0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6J0W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-JAN-19. REMARK 100 THE DEPOSITION ID IS D_1300010280. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-DEC-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97855 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.3.11 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46118 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 82.050 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.08600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.77 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.48400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 6J0V REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22% PEG 3350, 0.1M BIS-TRIS PH 6.0, REMARK 280 0.2M AMMONIUM ACETATE, EVAPORATION, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 50.70900 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2470 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 179 REMARK 465 LEU A 180 REMARK 465 THR A 181 REMARK 465 PHE A 182 REMARK 465 GLY A 183 REMARK 465 SER A 184 REMARK 465 PHE A 185 REMARK 465 SER A 186 REMARK 465 SER A 187 REMARK 465 SER A 188 REMARK 465 SER A 189 REMARK 465 THR A 190 REMARK 465 ASN A 191 REMARK 465 LYS A 192 REMARK 465 HIS A 193 REMARK 465 THR A 194 REMARK 465 GLU A 195 REMARK 465 LYS A 196 REMARK 465 PRO A 197 REMARK 465 LEU A 198 REMARK 465 ARG A 199 REMARK 465 LYS A 250 REMARK 465 GLN A 251 REMARK 465 ASP A 485 REMARK 465 HIS A 486 REMARK 465 SER A 487 REMARK 465 SER A 488 REMARK 465 LEU A 489 REMARK 465 PRO A 490 REMARK 465 THR A 491 REMARK 465 PRO A 492 REMARK 465 LYS A 493 REMARK 465 ASN A 494 REMARK 465 LEU A 495 REMARK 465 SER A 496 REMARK 465 MET A 497 REMARK 465 VAL A 498 REMARK 465 THR A 499 REMARK 465 TYR A 500 REMARK 465 ASP A 501 REMARK 465 THR A 502 REMARK 465 GLN A 503 REMARK 465 SER A 504 REMARK 465 ILE A 505 REMARK 465 SER A 506 REMARK 465 GLU A 507 REMARK 465 LYS A 508 REMARK 465 PRO A 509 REMARK 465 PRO A 510 REMARK 465 PRO A 511 REMARK 465 THR A 512 REMARK 465 ASN A 513 REMARK 465 MET B 1 REMARK 465 LYS B 179 REMARK 465 LEU B 180 REMARK 465 THR B 181 REMARK 465 PHE B 182 REMARK 465 GLY B 183 REMARK 465 SER B 184 REMARK 465 PHE B 185 REMARK 465 SER B 186 REMARK 465 SER B 187 REMARK 465 SER B 188 REMARK 465 SER B 189 REMARK 465 THR B 190 REMARK 465 ASN B 191 REMARK 465 LYS B 192 REMARK 465 HIS B 193 REMARK 465 THR B 194 REMARK 465 GLU B 195 REMARK 465 LYS B 196 REMARK 465 PRO B 197 REMARK 465 LEU B 198 REMARK 465 ARG B 199 REMARK 465 GLU B 200 REMARK 465 LYS B 250 REMARK 465 GLN B 251 REMARK 465 THR B 252 REMARK 465 SER B 253 REMARK 465 ASP B 485 REMARK 465 HIS B 486 REMARK 465 SER B 487 REMARK 465 SER B 488 REMARK 465 LEU B 489 REMARK 465 PRO B 490 REMARK 465 THR B 491 REMARK 465 PRO B 492 REMARK 465 LYS B 493 REMARK 465 ASN B 494 REMARK 465 LEU B 495 REMARK 465 SER B 496 REMARK 465 MET B 497 REMARK 465 VAL B 498 REMARK 465 THR B 499 REMARK 465 TYR B 500 REMARK 465 ASP B 501 REMARK 465 THR B 502 REMARK 465 GLN B 503 REMARK 465 SER B 504 REMARK 465 ILE B 505 REMARK 465 SER B 506 REMARK 465 GLU B 507 REMARK 465 LYS B 508 REMARK 465 PRO B 509 REMARK 465 PRO B 510 REMARK 465 PRO B 511 REMARK 465 THR B 512 REMARK 465 ASN B 513 REMARK 465 ILE C 20 REMARK 465 SER C 21 REMARK 465 GLY C 22 REMARK 465 PHE C 23 REMARK 465 ASP C 24 REMARK 465 ASP C 40 REMARK 465 ASP C 41 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP B 144 OG SER B 346 2.05 REMARK 500 O HOH A 618 O HOH A 622 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 88 -67.05 -90.54 REMARK 500 VAL A 177 -75.60 -77.22 REMARK 500 PHE A 280 126.54 -36.74 REMARK 500 CYS A 363 -149.49 -100.96 REMARK 500 LEU A 380 85.78 -154.08 REMARK 500 ASN A 439 -72.27 -52.78 REMARK 500 SER B 36 64.78 71.08 REMARK 500 ASP B 52 -51.67 -142.44 REMARK 500 ASP B 56 -164.52 -106.72 REMARK 500 ARG B 107 143.69 -170.54 REMARK 500 LYS B 220 -52.49 -135.05 REMARK 500 ASP B 233 78.53 -64.96 REMARK 500 ASN B 262 93.94 -62.29 REMARK 500 PHE B 280 125.58 -34.06 REMARK 500 LEU B 294 33.22 -99.56 REMARK 500 SER B 304 39.18 -89.76 REMARK 500 CYS B 363 -166.66 -103.42 REMARK 500 GLN B 438 -52.26 -137.34 REMARK 500 ASN B 439 -70.89 -43.78 REMARK 500 LYS B 470 50.03 -117.62 REMARK 500 ASN B 474 118.09 -163.38 REMARK 500 ILE B 482 98.40 -64.36 REMARK 500 SER C 18 17.81 85.16 REMARK 500 VAL C 32 -71.41 -66.35 REMARK 500 GLN D 19 -93.32 -77.83 REMARK 500 VAL D 32 -70.48 -76.14 REMARK 500 ASP D 40 -25.51 70.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6J0V RELATED DB: PDB DBREF 6J0W A 1 513 UNP P38850 RT107_YEAST 1 513 DBREF 6J0W B 1 513 UNP P38850 RT107_YEAST 1 513 DBREF 6J0W C 13 41 UNP P40026 KRE29_YEAST 13 41 DBREF 6J0W D 13 41 UNP P40026 KRE29_YEAST 13 41 SEQRES 1 A 513 MET SER THR SER LEU LEU PHE GLU GLN LEU ASN PHE LEU SEQRES 2 A 513 ILE LEU VAL ALA ALA GLU ALA GLU LEU PRO ILE ALA HIS SEQRES 3 A 513 SER THR ARG LYS LEU LEU MET ASP ASN SER CYS ASN ASN SEQRES 4 A 513 CYS GLN ILE TYR GLU LEU TYR ASN GLU ASN LEU LYS ASP SEQRES 5 A 513 VAL LYS THR ASP LYS ASP TRP PHE MET ASN LYS PHE GLY SEQRES 6 A 513 PRO GLN THR VAL HIS PHE VAL ILE SER ASN THR ILE ASN SEQRES 7 A 513 PHE PRO PHE TYR LYS ILE VAL TYR PHE ASP LEU LEU ILE SEQRES 8 A 513 PRO VAL VAL SER HIS THR TRP VAL GLN ASP SER VAL LYS SEQRES 9 A 513 THR LYS ARG HIS LEU ARG THR ASN MET TYR SER PRO ASN SEQRES 10 A 513 PRO PHE HIS LEU LEU ARG ASP CYS GLN VAL TYR ILE SER SEQRES 11 A 513 LYS SER SER PHE ASN LYS CYS GLU TYR ILE LEU TYR SER SEQRES 12 A 513 ASP LEU LEU HIS LEU LEU GLY GLY THR LEU VAL ASN TYR SEQRES 13 A 513 ILE SER ASN ARG THR THR HIS VAL ILE VAL GLN SER PRO SEQRES 14 A 513 GLN ASP PRO ILE ILE ALA THR VAL SER LYS LEU THR PHE SEQRES 15 A 513 GLY SER PHE SER SER SER SER THR ASN LYS HIS THR GLU SEQRES 16 A 513 LYS PRO LEU ARG GLU TRP LYS PHE VAL TYR PRO ILE TRP SEQRES 17 A 513 ILE LEU TYR HIS PHE LYS MET ALA LYS PRO LEU LYS GLY SEQRES 18 A 513 GLU LEU ALA THR LEU CYS GLU LEU ASP MET GLN ASP THR SEQRES 19 A 513 SER GLU GLU GLN LEU PHE ALA LYS TRP GLU GLU VAL ILE SEQRES 20 A 513 GLY ASP LYS GLN THR SER SER SER GLN LEU THR LEU HIS SEQRES 21 A 513 PRO ASN LYS THR LEU PHE LYS ASN HIS HIS PHE ALA ILE SEQRES 22 A 513 SER PRO ASP LEU ASN PHE PHE THR PRO LEU TYR TRP PHE SEQRES 23 A 513 LEU LYS GLY PHE ILE GLU ASP LEU ASP GLY LYS VAL THR SEQRES 24 A 513 PRO LEU SER PHE SER ASP ASP LEU LYS SER VAL TYR GLN SEQRES 25 A 513 ALA PHE PRO ASP ILE ASP CYS TYR ILE GLY HIS SER ALA SEQRES 26 A 513 ASN SER PRO ILE LEU GLU LYS THR LYS SER ILE LYS PRO SEQRES 27 A 513 GLU ILE HIS VAL GLY ASN VAL SER TRP LEU PHE TYR MET SEQRES 28 A 513 PHE ALA LEU GLN LYS PHE THR PRO VAL SER GLN CYS LYS SEQRES 29 A 513 LEU ILE HIS GLN PRO PHE HIS ALA LYS LEU PHE THR SER SEQRES 30 A 513 LYS GLU LEU THR VAL ALA TYR THR ASN TYR PHE GLY SER SEQRES 31 A 513 GLN ARG PHE TYR ILE GLN ARG LEU VAL GLU ILE LEU GLY SEQRES 32 A 513 GLY LEU SER THR PRO GLU LEU THR ARG LYS ASN THR HIS SEQRES 33 A 513 LEU ILE THR LYS SER THR ILE GLY LYS LYS PHE LYS VAL SEQRES 34 A 513 ALA LYS LYS TRP SER LEU ASP PRO GLN ASN ALA ILE ILE SEQRES 35 A 513 VAL THR ASN HIS MET TRP LEU GLU GLN CYS TYR MET ASN SEQRES 36 A 513 ASN SER LYS LEU ASN PRO LYS ASP SER ARG PHE GLN ASN SEQRES 37 A 513 PHE LYS LEU ASP ASP ASN MET GLY TRP ASN ILE GLY GLN SEQRES 38 A 513 ILE GLY MET ASP HIS SER SER LEU PRO THR PRO LYS ASN SEQRES 39 A 513 LEU SER MET VAL THR TYR ASP THR GLN SER ILE SER GLU SEQRES 40 A 513 LYS PRO PRO PRO THR ASN SEQRES 1 B 513 MET SER THR SER LEU LEU PHE GLU GLN LEU ASN PHE LEU SEQRES 2 B 513 ILE LEU VAL ALA ALA GLU ALA GLU LEU PRO ILE ALA HIS SEQRES 3 B 513 SER THR ARG LYS LEU LEU MET ASP ASN SER CYS ASN ASN SEQRES 4 B 513 CYS GLN ILE TYR GLU LEU TYR ASN GLU ASN LEU LYS ASP SEQRES 5 B 513 VAL LYS THR ASP LYS ASP TRP PHE MET ASN LYS PHE GLY SEQRES 6 B 513 PRO GLN THR VAL HIS PHE VAL ILE SER ASN THR ILE ASN SEQRES 7 B 513 PHE PRO PHE TYR LYS ILE VAL TYR PHE ASP LEU LEU ILE SEQRES 8 B 513 PRO VAL VAL SER HIS THR TRP VAL GLN ASP SER VAL LYS SEQRES 9 B 513 THR LYS ARG HIS LEU ARG THR ASN MET TYR SER PRO ASN SEQRES 10 B 513 PRO PHE HIS LEU LEU ARG ASP CYS GLN VAL TYR ILE SER SEQRES 11 B 513 LYS SER SER PHE ASN LYS CYS GLU TYR ILE LEU TYR SER SEQRES 12 B 513 ASP LEU LEU HIS LEU LEU GLY GLY THR LEU VAL ASN TYR SEQRES 13 B 513 ILE SER ASN ARG THR THR HIS VAL ILE VAL GLN SER PRO SEQRES 14 B 513 GLN ASP PRO ILE ILE ALA THR VAL SER LYS LEU THR PHE SEQRES 15 B 513 GLY SER PHE SER SER SER SER THR ASN LYS HIS THR GLU SEQRES 16 B 513 LYS PRO LEU ARG GLU TRP LYS PHE VAL TYR PRO ILE TRP SEQRES 17 B 513 ILE LEU TYR HIS PHE LYS MET ALA LYS PRO LEU LYS GLY SEQRES 18 B 513 GLU LEU ALA THR LEU CYS GLU LEU ASP MET GLN ASP THR SEQRES 19 B 513 SER GLU GLU GLN LEU PHE ALA LYS TRP GLU GLU VAL ILE SEQRES 20 B 513 GLY ASP LYS GLN THR SER SER SER GLN LEU THR LEU HIS SEQRES 21 B 513 PRO ASN LYS THR LEU PHE LYS ASN HIS HIS PHE ALA ILE SEQRES 22 B 513 SER PRO ASP LEU ASN PHE PHE THR PRO LEU TYR TRP PHE SEQRES 23 B 513 LEU LYS GLY PHE ILE GLU ASP LEU ASP GLY LYS VAL THR SEQRES 24 B 513 PRO LEU SER PHE SER ASP ASP LEU LYS SER VAL TYR GLN SEQRES 25 B 513 ALA PHE PRO ASP ILE ASP CYS TYR ILE GLY HIS SER ALA SEQRES 26 B 513 ASN SER PRO ILE LEU GLU LYS THR LYS SER ILE LYS PRO SEQRES 27 B 513 GLU ILE HIS VAL GLY ASN VAL SER TRP LEU PHE TYR MET SEQRES 28 B 513 PHE ALA LEU GLN LYS PHE THR PRO VAL SER GLN CYS LYS SEQRES 29 B 513 LEU ILE HIS GLN PRO PHE HIS ALA LYS LEU PHE THR SER SEQRES 30 B 513 LYS GLU LEU THR VAL ALA TYR THR ASN TYR PHE GLY SER SEQRES 31 B 513 GLN ARG PHE TYR ILE GLN ARG LEU VAL GLU ILE LEU GLY SEQRES 32 B 513 GLY LEU SER THR PRO GLU LEU THR ARG LYS ASN THR HIS SEQRES 33 B 513 LEU ILE THR LYS SER THR ILE GLY LYS LYS PHE LYS VAL SEQRES 34 B 513 ALA LYS LYS TRP SER LEU ASP PRO GLN ASN ALA ILE ILE SEQRES 35 B 513 VAL THR ASN HIS MET TRP LEU GLU GLN CYS TYR MET ASN SEQRES 36 B 513 ASN SER LYS LEU ASN PRO LYS ASP SER ARG PHE GLN ASN SEQRES 37 B 513 PHE LYS LEU ASP ASP ASN MET GLY TRP ASN ILE GLY GLN SEQRES 38 B 513 ILE GLY MET ASP HIS SER SER LEU PRO THR PRO LYS ASN SEQRES 39 B 513 LEU SER MET VAL THR TYR ASP THR GLN SER ILE SER GLU SEQRES 40 B 513 LYS PRO PRO PRO THR ASN SEQRES 1 C 29 GLU THR VAL PRO ASP SER GLN ILE SER GLY PHE ASP SER SEQRES 2 C 29 PRO LEU ILE PRO THR SER VAL GLY SER TYR PHE ARG ASP SEQRES 3 C 29 ASP ASP ASP SEQRES 1 D 29 GLU THR VAL PRO ASP SER GLN ILE SER GLY PHE ASP SER SEQRES 2 D 29 PRO LEU ILE PRO THR SER VAL GLY SER TYR PHE ARG ASP SEQRES 3 D 29 ASP ASP ASP FORMUL 5 HOH *50(H2 O) HELIX 1 AA1 ALA A 18 ALA A 20 5 3 HELIX 2 AA2 GLU A 21 ASN A 35 1 15 HELIX 3 AA3 ASP A 56 GLY A 65 1 10 HELIX 4 AA4 PHE A 81 ASP A 88 1 8 HELIX 5 AA5 SER A 95 LYS A 106 1 12 HELIX 6 AA6 THR A 111 SER A 115 5 5 HELIX 7 AA7 LYS A 131 PHE A 134 5 4 HELIX 8 AA8 ASN A 135 LEU A 149 1 15 HELIX 9 AA9 ASP A 171 SER A 178 1 8 HELIX 10 AB1 PRO A 206 ALA A 216 1 11 HELIX 11 AB2 GLU A 222 CYS A 227 1 6 HELIX 12 AB3 SER A 235 GLY A 248 1 14 HELIX 13 AB4 PHE A 280 LEU A 294 1 15 HELIX 14 AB5 ASP A 306 PHE A 314 1 9 HELIX 15 AB6 SER A 327 LYS A 337 1 11 HELIX 16 AB7 ASN A 344 GLN A 355 1 12 HELIX 17 AB8 PRO A 359 CYS A 363 5 5 HELIX 18 AB9 LYS A 364 GLN A 368 5 5 HELIX 19 AC1 GLY A 389 GLY A 403 1 15 HELIX 20 AC2 GLY A 424 SER A 434 1 11 HELIX 21 AC3 ASN A 445 ASN A 456 1 12 HELIX 22 AC4 SER A 464 ASN A 468 5 5 HELIX 23 AC5 LYS A 470 ASN A 478 5 9 HELIX 24 AC6 ALA B 18 ALA B 20 5 3 HELIX 25 AC7 GLU B 21 ASN B 35 1 15 HELIX 26 AC8 TYR B 46 GLU B 48 5 3 HELIX 27 AC9 ASP B 56 GLY B 65 1 10 HELIX 28 AD1 PHE B 81 PHE B 87 1 7 HELIX 29 AD2 SER B 95 LYS B 106 1 12 HELIX 30 AD3 THR B 111 SER B 115 5 5 HELIX 31 AD4 LYS B 131 PHE B 134 5 4 HELIX 32 AD5 ASN B 135 LEU B 149 1 15 HELIX 33 AD6 PRO B 172 SER B 178 1 7 HELIX 34 AD7 PRO B 206 ALA B 216 1 11 HELIX 35 AD8 GLY B 221 GLU B 228 1 8 HELIX 36 AD9 SER B 235 ILE B 247 1 13 HELIX 37 AE1 PHE B 280 LEU B 294 1 15 HELIX 38 AE2 ASP B 306 PHE B 314 1 9 HELIX 39 AE3 SER B 327 LYS B 337 1 11 HELIX 40 AE4 ASN B 344 GLN B 355 1 12 HELIX 41 AE5 PRO B 359 CYS B 363 5 5 HELIX 42 AE6 LYS B 364 GLN B 368 5 5 HELIX 43 AE7 THR B 376 GLU B 379 5 4 HELIX 44 AE8 GLY B 389 GLY B 403 1 15 HELIX 45 AE9 GLY B 424 LEU B 435 1 12 HELIX 46 AF1 HIS B 446 ASN B 456 1 11 HELIX 47 AF2 ASP B 463 GLN B 467 5 5 HELIX 48 AF3 LYS B 470 ASN B 478 5 9 SHEET 1 AA1 4 ASN A 39 GLU A 44 0 SHEET 2 AA1 4 ASN A 11 VAL A 16 1 N PHE A 12 O ASN A 39 SHEET 3 AA1 4 PHE A 71 ILE A 73 1 O ILE A 73 N LEU A 13 SHEET 4 AA1 4 VAL A 93 VAL A 94 1 O VAL A 94 N VAL A 72 SHEET 1 AA2 4 THR A 152 VAL A 154 0 SHEET 2 AA2 4 GLN A 126 ILE A 129 1 N VAL A 127 O THR A 152 SHEET 3 AA2 4 HIS A 163 ILE A 165 1 O HIS A 163 N TYR A 128 SHEET 4 AA2 4 LYS A 202 VAL A 204 1 O VAL A 204 N VAL A 164 SHEET 1 AA3 2 ILE A 157 SER A 158 0 SHEET 2 AA3 2 PRO C 26 ILE C 28 -1 O LEU C 27 N ILE A 157 SHEET 1 AA4 4 LYS A 297 PRO A 300 0 SHEET 2 AA4 4 HIS A 270 ILE A 273 1 N PHE A 271 O LYS A 297 SHEET 3 AA4 4 CYS A 319 ILE A 321 1 O CYS A 319 N ALA A 272 SHEET 4 AA4 4 HIS A 341 GLY A 343 1 O HIS A 341 N TYR A 320 SHEET 1 AA5 4 LEU A 405 THR A 407 0 SHEET 2 AA5 4 THR A 381 TYR A 384 1 N VAL A 382 O THR A 407 SHEET 3 AA5 4 HIS A 416 ILE A 418 1 O ILE A 418 N ALA A 383 SHEET 4 AA5 4 ILE A 442 THR A 444 1 O ILE A 442 N LEU A 417 SHEET 1 AA6 4 ASN B 39 GLU B 44 0 SHEET 2 AA6 4 ASN B 11 VAL B 16 1 N VAL B 16 O TYR B 43 SHEET 3 AA6 4 VAL B 72 ILE B 73 1 O ILE B 73 N LEU B 15 SHEET 4 AA6 4 VAL B 93 VAL B 94 1 O VAL B 94 N VAL B 72 SHEET 1 AA7 4 THR B 152 VAL B 154 0 SHEET 2 AA7 4 GLN B 126 ILE B 129 1 N VAL B 127 O THR B 152 SHEET 3 AA7 4 HIS B 163 ILE B 165 1 O HIS B 163 N TYR B 128 SHEET 4 AA7 4 LYS B 202 VAL B 204 1 O VAL B 204 N VAL B 164 SHEET 1 AA8 4 LYS B 297 PRO B 300 0 SHEET 2 AA8 4 HIS B 270 ILE B 273 1 N PHE B 271 O LYS B 297 SHEET 3 AA8 4 CYS B 319 ILE B 321 1 O CYS B 319 N ALA B 272 SHEET 4 AA8 4 HIS B 341 GLY B 343 1 O HIS B 341 N TYR B 320 SHEET 1 AA9 4 LEU B 405 SER B 406 0 SHEET 2 AA9 4 THR B 381 TYR B 384 1 N VAL B 382 O LEU B 405 SHEET 3 AA9 4 HIS B 416 THR B 419 1 O ILE B 418 N ALA B 383 SHEET 4 AA9 4 ILE B 442 ASN B 445 1 O THR B 444 N THR B 419 CISPEP 1 GLY A 65 PRO A 66 0 1.63 CISPEP 2 GLY B 65 PRO B 66 0 -1.75 CRYST1 71.777 101.418 86.559 90.00 108.57 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013932 0.000000 0.004682 0.00000 SCALE2 0.000000 0.009860 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012188 0.00000