HEADER TRANSLATION 03-JAN-19 6J2Y TITLE SOLUTION STRUCTURE OF TRANSLATIONALLY CONTROLLED TUMOR PROTEIN FROM TITLE 2 PHOTOSYNTHETIC MICROALGA NANNOCHLOROPSIS OCEANICA COMPND MOL_ID: 1; COMPND 2 MOLECULE: NOTCTP; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NANNOCHLOROPSIS OCEANICA; SOURCE 3 ORGANISM_TAXID: 145522; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS TRANSLATION, TCTP, EEF1B-BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR X.YAO,Y.FENG REVDAT 2 14-JUN-23 6J2Y 1 REMARK REVDAT 1 13-MAR-19 6J2Y 0 JRNL AUTH X.YAO,Y.J.LIU,Q.CUI,Y.FENG JRNL TITL SOLUTION STRUCTURE OF A UNICELLULAR MICROALGAE-DERIVED JRNL TITL 2 TRANSLATIONALLY CONTROLLED TUMOR PROTEIN REVEALED BOTH JRNL TITL 3 CONSERVED FEATURES AND STRUCTURAL DIVERSITY. JRNL REF ARCH. BIOCHEM. BIOPHYS. V. 665 23 2019 JRNL REFN ESSN 1096-0384 JRNL PMID 30797749 JRNL DOI 10.1016/J.ABB.2019.02.012 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6J2Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-JAN-19. REMARK 100 THE DEPOSITION ID IS D_1300010379. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 308 REMARK 210 PH : 7.8 REMARK 210 IONIC STRENGTH : 250 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1 MM [U-13C; U-15N] NOTCTP, 50 REMARK 210 MM SODIUM PHOSPHATE, 200 MM REMARK 210 POTASSIUM CHLORIDE, 5 MM DTT, 5 REMARK 210 MM EDTA, 0.02 % W/V SODIUM AZIDE, REMARK 210 0.01 % W/V DSS, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D 1H-15N NOESY; 3D 1H-13C NOESY REMARK 210 ALIPHATIC; 3D 1H-13C NOESY REMARK 210 AROMATIC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CNS, NMRVIEW REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 54 84.94 64.24 REMARK 500 1 ASP A 62 -66.11 -109.78 REMARK 500 1 SER A 80 -74.05 -122.67 REMARK 500 1 ALA A 82 98.22 62.18 REMARK 500 1 LEU A 181 -61.74 -170.36 REMARK 500 2 CYS A 52 -36.65 179.34 REMARK 500 2 ALA A 59 140.55 -170.35 REMARK 500 2 ALA A 68 74.79 58.51 REMARK 500 2 SER A 80 -75.76 -120.93 REMARK 500 2 ALA A 82 95.37 59.85 REMARK 500 2 SER A 90 -38.46 67.70 REMARK 500 2 LEU A 181 -83.23 75.86 REMARK 500 2 GLU A 182 162.52 179.35 REMARK 500 2 HIS A 185 171.06 83.36 REMARK 500 3 CYS A 52 -46.16 76.27 REMARK 500 3 ALA A 55 -56.31 -153.01 REMARK 500 3 PHE A 56 -55.54 69.79 REMARK 500 3 ALA A 68 102.32 -55.68 REMARK 500 3 SER A 80 -74.32 -98.63 REMARK 500 3 ALA A 82 88.41 66.02 REMARK 500 3 LEU A 181 161.22 73.59 REMARK 500 3 HIS A 186 166.73 56.86 REMARK 500 4 VAL A 43 -89.28 -98.75 REMARK 500 4 ASP A 47 98.72 58.63 REMARK 500 4 ASP A 49 61.80 -105.37 REMARK 500 4 ILE A 50 109.22 69.42 REMARK 500 4 ALA A 59 -58.05 71.76 REMARK 500 4 ALA A 68 23.03 -79.36 REMARK 500 4 SER A 80 -79.05 -107.40 REMARK 500 4 ALA A 82 102.62 62.39 REMARK 500 4 HIS A 183 103.52 70.34 REMARK 500 5 ASP A 47 104.81 -45.89 REMARK 500 5 ILE A 48 -51.76 67.45 REMARK 500 5 GLU A 63 144.50 73.71 REMARK 500 5 THR A 69 48.15 -78.43 REMARK 500 5 SER A 80 -67.12 -128.18 REMARK 500 5 ALA A 82 87.56 53.56 REMARK 500 5 HIS A 185 177.06 75.77 REMARK 500 5 HIS A 186 101.79 -165.78 REMARK 500 6 ASP A 47 161.75 70.96 REMARK 500 6 ASP A 49 -59.70 -155.79 REMARK 500 6 ALA A 59 -87.94 57.93 REMARK 500 6 SER A 80 -78.52 -109.58 REMARK 500 6 ALA A 82 90.11 64.54 REMARK 500 6 SER A 89 -73.09 -81.37 REMARK 500 6 SER A 90 17.28 59.51 REMARK 500 7 ASP A 49 117.36 67.06 REMARK 500 7 ILE A 50 -38.66 72.00 REMARK 500 7 PHE A 56 -62.25 -101.89 REMARK 500 7 ASP A 61 -65.34 -160.78 REMARK 500 REMARK 500 THIS ENTRY HAS 165 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 10 ARG A 106 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 25391 RELATED DB: BMRB DBREF 6J2Y A 1 188 PDB 6J2Y 6J2Y 1 188 SEQRES 1 A 188 MET ILE VAL TYR LYS ASP VAL ILE SER GLY ASP GLU VAL SEQRES 2 A 188 VAL SER ASP ALA LEU LYS ILE THR PRO VAL MET GLU GLY SEQRES 3 A 188 GLY GLU GLU VAL PRO GLY LEU PHE GLU VAL ASP SER ALA SEQRES 4 A 188 MET VAL ALA VAL GLY GLY GLY ASP ILE ASP ILE GLY CYS SEQRES 5 A 188 GLY ASN ALA PHE GLY GLY ALA GLY ASP ASP GLU GLY ALA SEQRES 6 A 188 ASP ASP ALA THR GLN LYS GLU ASN ASN VAL SER GLY PRO SEQRES 7 A 188 SER SER PHE ALA TYR THR ALA MET PRO PHE SER SER LYS SEQRES 8 A 188 GLY GLU PHE LYS SER TRP VAL LYS ASP TYR VAL ARG ASN SEQRES 9 A 188 VAL ARG GLN ALA LEU LYS GLY SER GLY VAL ALA VAL GLU SEQRES 10 A 188 ASP ILE LYS LYS PHE MET GLU GLU ALA PRO THR PHE VAL SEQRES 11 A 188 LYS TRP LEU VAL ASP LYS TYR ASP ASP LEU GLU PHE PHE SEQRES 12 A 188 MET SER LYS SER MET ASN PRO ASP ALA GLY LEU ILE PHE SEQRES 13 A 188 SER TYR TYR LYS GLU GLY ALA HIS CYS PRO THR PHE VAL SEQRES 14 A 188 TYR VAL LYS SER GLY TYR LYS VAL VAL LYS PHE LEU GLU SEQRES 15 A 188 HIS HIS HIS HIS HIS HIS HELIX 1 AA1 LYS A 91 SER A 112 1 22 HELIX 2 AA2 ALA A 115 TYR A 137 1 23 HELIX 3 AA3 ASP A 138 LEU A 140 5 3 SHEET 1 AA1 3 GLU A 12 SER A 15 0 SHEET 2 AA1 3 ILE A 2 LYS A 5 -1 N TYR A 4 O VAL A 13 SHEET 3 AA1 3 LYS A 176 LYS A 179 -1 O VAL A 178 N VAL A 3 SHEET 1 AA2 6 THR A 21 GLU A 25 0 SHEET 2 AA2 6 GLU A 28 VAL A 36 -1 O VAL A 30 N VAL A 23 SHEET 3 AA2 6 THR A 167 TYR A 170 -1 O TYR A 170 N PHE A 34 SHEET 4 AA2 6 ILE A 155 TYR A 158 -1 N TYR A 158 O THR A 167 SHEET 5 AA2 6 GLU A 141 SER A 145 -1 N PHE A 143 O ILE A 155 SHEET 6 AA2 6 TYR A 83 MET A 86 -1 N MET A 86 O PHE A 142 SHEET 1 AA3 2 MET A 40 VAL A 43 0 SHEET 2 AA3 2 GLN A 70 ASN A 73 -1 O GLN A 70 N VAL A 43 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1