data_6J4F # _entry.id 6J4F # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.320 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6J4F WWPDB D_1300010430 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6J4F _pdbx_database_status.recvd_initial_deposition_date 2019-01-08 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Xu, Y.P.' 1 ? 'Xu, H.' 2 ? 'Wang, B.' 3 ? 'Su, X.D.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Crystal structure of the AtWRKY2 domain' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Xu, Y.P.' 1 ? primary 'Xu, H.' 2 ? primary 'Wang, B.' 3 ? primary 'Su, X.D.' 4 ? # _cell.angle_alpha 93.70 _cell.angle_alpha_esd ? _cell.angle_beta 87.30 _cell.angle_beta_esd ? _cell.angle_gamma 97.50 _cell.angle_gamma_esd ? _cell.entry_id 6J4F _cell.details ? _cell.formula_units_Z ? _cell.length_a 38.100 _cell.length_a_esd ? _cell.length_b 48.300 _cell.length_b_esd ? _cell.length_c 69.100 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6J4F _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Probable WRKY transcription factor 2' 9631.860 2 ? ? ? ? 2 polymer syn ;DNA (5'-D(*AP*GP*CP*CP*TP*TP*TP*GP*AP*CP*CP*AP*GP*CP*G)-3') ; 4569.973 2 ? ? ? ? 3 polymer syn ;DNA (5'-D(*TP*CP*GP*CP*TP*GP*GP*TP*CP*AP*AP*AP*GP*GP*C)-3') ; 4609.997 2 ? ? ? ? 4 non-polymer syn 'ZINC ION' 65.409 2 ? ? ? ? 5 water nat water 18.015 8 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'WRKY DNA-binding protein 2' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MEQRRGDSMAGGAPAEDGYNWRKYGQKLVKGSEYPRSYYKCTNPNCQVKKKVERSREGHITEIIYKGAHNHLKPLEHHHH HH ; ;MEQRRGDSMAGGAPAEDGYNWRKYGQKLVKGSEYPRSYYKCTNPNCQVKKKVERSREGHITEIIYKGAHNHLKPLEHHHH HH ; B,F ? 2 polydeoxyribonucleotide no no '(DA)(DG)(DC)(DC)(DT)(DT)(DT)(DG)(DA)(DC)(DC)(DA)(DG)(DC)(DG)' AGCCTTTGACCAGCG C,G ? 3 polydeoxyribonucleotide no no '(DT)(DC)(DG)(DC)(DT)(DG)(DG)(DT)(DC)(DA)(DA)(DA)(DG)(DG)(DC)' TCGCTGGTCAAAGGC D,H ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLU n 1 3 GLN n 1 4 ARG n 1 5 ARG n 1 6 GLY n 1 7 ASP n 1 8 SER n 1 9 MET n 1 10 ALA n 1 11 GLY n 1 12 GLY n 1 13 ALA n 1 14 PRO n 1 15 ALA n 1 16 GLU n 1 17 ASP n 1 18 GLY n 1 19 TYR n 1 20 ASN n 1 21 TRP n 1 22 ARG n 1 23 LYS n 1 24 TYR n 1 25 GLY n 1 26 GLN n 1 27 LYS n 1 28 LEU n 1 29 VAL n 1 30 LYS n 1 31 GLY n 1 32 SER n 1 33 GLU n 1 34 TYR n 1 35 PRO n 1 36 ARG n 1 37 SER n 1 38 TYR n 1 39 TYR n 1 40 LYS n 1 41 CYS n 1 42 THR n 1 43 ASN n 1 44 PRO n 1 45 ASN n 1 46 CYS n 1 47 GLN n 1 48 VAL n 1 49 LYS n 1 50 LYS n 1 51 LYS n 1 52 VAL n 1 53 GLU n 1 54 ARG n 1 55 SER n 1 56 ARG n 1 57 GLU n 1 58 GLY n 1 59 HIS n 1 60 ILE n 1 61 THR n 1 62 GLU n 1 63 ILE n 1 64 ILE n 1 65 TYR n 1 66 LYS n 1 67 GLY n 1 68 ALA n 1 69 HIS n 1 70 ASN n 1 71 HIS n 1 72 LEU n 1 73 LYS n 1 74 PRO n 1 75 LEU n 1 76 GLU n 1 77 HIS n 1 78 HIS n 1 79 HIS n 1 80 HIS n 1 81 HIS n 1 82 HIS n 2 1 DA n 2 2 DG n 2 3 DC n 2 4 DC n 2 5 DT n 2 6 DT n 2 7 DT n 2 8 DG n 2 9 DA n 2 10 DC n 2 11 DC n 2 12 DA n 2 13 DG n 2 14 DC n 2 15 DG n 3 1 DT n 3 2 DC n 3 3 DG n 3 4 DC n 3 5 DT n 3 6 DG n 3 7 DG n 3 8 DT n 3 9 DC n 3 10 DA n 3 11 DA n 3 12 DA n 3 13 DG n 3 14 DG n 3 15 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 82 _entity_src_gen.gene_src_common_name 'Mouse-ear cress' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'WRKY2, At5g56270, K24C1.9, MXK23.1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Arabidopsis thaliana' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 3702 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 15 'Arabidopsis thaliana' ? 3702 ? 3 1 sample 1 15 'Arabidopsis thaliana' ? 3702 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP WRKY2_ARATH Q9FG77 ? 1 EQRRGDSMAGGAPAEDGYNWRKYGQKLVKGSEYPRSYYKCTNPNCQVKKKVERSREGHITEIIYKGAHNHLKP 259 2 PDB 6J4F 6J4F ? 2 ? 1 3 PDB 6J4F 6J4F ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6J4F B 2 ? 74 ? Q9FG77 259 ? 331 ? 259 331 2 2 6J4F C 1 ? 15 ? 6J4F 1 ? 15 ? 1 15 3 3 6J4F D 1 ? 15 ? 6J4F 1 ? 15 ? 1 15 4 1 6J4F F 2 ? 74 ? Q9FG77 259 ? 331 ? 259 331 5 2 6J4F G 1 ? 15 ? 6J4F 1 ? 15 ? 1 15 6 3 6J4F H 1 ? 15 ? 6J4F 1 ? 15 ? 1 15 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6J4F MET B 1 ? UNP Q9FG77 ? ? 'initiating methionine' 258 1 1 6J4F LEU B 75 ? UNP Q9FG77 ? ? 'expression tag' 332 2 1 6J4F GLU B 76 ? UNP Q9FG77 ? ? 'expression tag' 333 3 1 6J4F HIS B 77 ? UNP Q9FG77 ? ? 'expression tag' 334 4 1 6J4F HIS B 78 ? UNP Q9FG77 ? ? 'expression tag' 335 5 1 6J4F HIS B 79 ? UNP Q9FG77 ? ? 'expression tag' 336 6 1 6J4F HIS B 80 ? UNP Q9FG77 ? ? 'expression tag' 337 7 1 6J4F HIS B 81 ? UNP Q9FG77 ? ? 'expression tag' 338 8 1 6J4F HIS B 82 ? UNP Q9FG77 ? ? 'expression tag' 339 9 4 6J4F MET F 1 ? UNP Q9FG77 ? ? 'initiating methionine' 258 10 4 6J4F LEU F 75 ? UNP Q9FG77 ? ? 'expression tag' 332 11 4 6J4F GLU F 76 ? UNP Q9FG77 ? ? 'expression tag' 333 12 4 6J4F HIS F 77 ? UNP Q9FG77 ? ? 'expression tag' 334 13 4 6J4F HIS F 78 ? UNP Q9FG77 ? ? 'expression tag' 335 14 4 6J4F HIS F 79 ? UNP Q9FG77 ? ? 'expression tag' 336 15 4 6J4F HIS F 80 ? UNP Q9FG77 ? ? 'expression tag' 337 16 4 6J4F HIS F 81 ? UNP Q9FG77 ? ? 'expression tag' 338 17 4 6J4F HIS F 82 ? UNP Q9FG77 ? ? 'expression tag' 339 18 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6J4F _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.53 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 65.19 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;0.2M Lithium sulfate, 0.1M MES pH 6.0, 20% PEG 4000 ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2018-01-12 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.978 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL19U1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.978 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL19U1 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6J4F _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.4 _reflns.d_resolution_low 29.58 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 17894 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 93.47 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.4 _reflns.pdbx_Rmerge_I_obs 0.071 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 9.59 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.084 _reflns.pdbx_Rpim_I_all 0.044 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.995 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.4 _reflns_shell.d_res_low 2.486 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.13 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1813 _reflns_shell.percent_possible_all 96.37 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.47 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 3.6 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 0.55 _reflns_shell.pdbx_Rpim_I_all 0.29 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.926 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6J4F _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.400 _refine.ls_d_res_low 29.58 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 17785 _refine.ls_number_reflns_R_free 1787 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 93.48 _refine.ls_percent_reflns_R_free 10.05 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1919 _refine.ls_R_factor_R_free 0.2260 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1880 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.36 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 2ayd _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details 0.1 _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 30.88 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.34 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.400 _refine_hist.d_res_low 29.58 _refine_hist.number_atoms_solvent 8 _refine_hist.number_atoms_total 2265 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1037 _refine_hist.pdbx_number_atoms_nucleic_acid 1218 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.009 ? 2431 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.987 ? 3532 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 25.041 ? 1232 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.048 ? 374 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.007 ? 245 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.4001 2.4649 . . 142 1247 96.00 . . . 0.3495 . 0.2913 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.4649 2.5374 . . 131 1292 96.00 . . . 0.3006 . 0.2831 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.5374 2.6193 . . 154 1239 97.00 . . . 0.3584 . 0.2711 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.6193 2.7128 . . 131 1228 92.00 . . . 0.3455 . 0.2837 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.7128 2.8214 . . 136 1178 91.00 . . . 0.3274 . 0.2667 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.8214 2.9497 . . 139 1291 96.00 . . . 0.3011 . 0.2430 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.9497 3.1050 . . 136 1264 96.00 . . . 0.3012 . 0.2474 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.1050 3.2993 . . 139 1213 93.00 . . . 0.2809 . 0.2284 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.2993 3.5537 . . 127 1199 90.00 . . . 0.2411 . 0.1954 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.5537 3.9106 . . 134 1156 88.00 . . . 0.2524 . 0.1912 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.9106 4.4748 . . 141 1244 95.00 . . . 0.1810 . 0.1540 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.4748 5.6313 . . 142 1207 91.00 . . . 0.1557 . 0.1407 . . . . . . . . . . 'X-RAY DIFFRACTION' 5.6313 29.5871 . . 135 1234 93.00 . . . 0.1503 . 0.1343 . . . . . . . . . . # _struct.entry_id 6J4F _struct.title 'Crystal structure of the AtWRKY2 domain' _struct.pdbx_descriptor 'Probable WRKY transcription factor 2/DNA Complex' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6J4F _struct_keywords.text 'WRKY transcription factors N-terminal WRKY domain, DNA BINDING PROTEIN, DNA BINDING PROTEIN-DNA complex' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 1 ? E N N 2 ? F N N 3 ? G N N 4 ? H N N 4 ? I N N 5 ? J N N 5 ? K N N 5 ? L N N 5 ? M N N 5 ? N N N 5 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? A CYS 46 SG ? ? ? 1_555 G ZN . ZN ? ? B CYS 303 B ZN 401 1_555 ? ? ? ? ? ? ? 2.251 ? metalc2 metalc ? ? A HIS 69 ND1 ? ? ? 1_555 G ZN . ZN ? ? B HIS 326 B ZN 401 1_555 ? ? ? ? ? ? ? 1.973 ? metalc3 metalc ? ? A HIS 71 NE2 ? ? ? 1_555 G ZN . ZN ? ? B HIS 328 B ZN 401 1_555 ? ? ? ? ? ? ? 2.183 ? metalc4 metalc ? ? D CYS 41 SG ? ? ? 1_555 H ZN . ZN ? ? F CYS 298 F ZN 401 1_555 ? ? ? ? ? ? ? 2.245 ? metalc5 metalc ? ? D CYS 46 SG ? ? ? 1_555 H ZN . ZN ? ? F CYS 303 F ZN 401 1_555 ? ? ? ? ? ? ? 2.161 ? metalc6 metalc ? ? D HIS 69 ND1 ? ? ? 1_555 H ZN . ZN ? ? F HIS 326 F ZN 401 1_555 ? ? ? ? ? ? ? 2.042 ? metalc7 metalc ? ? D HIS 71 NE2 ? ? ? 1_555 H ZN . ZN ? ? F HIS 328 F ZN 401 1_555 ? ? ? ? ? ? ? 2.126 ? hydrog1 hydrog ? ? B DG 2 N1 ? ? ? 1_555 C DC 15 N3 ? ? C DG 2 D DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog2 hydrog ? ? B DG 2 N2 ? ? ? 1_555 C DC 15 O2 ? ? C DG 2 D DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog3 hydrog ? ? B DG 2 O6 ? ? ? 1_555 C DC 15 N4 ? ? C DG 2 D DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog4 hydrog ? ? B DC 3 N3 ? ? ? 1_555 C DG 14 N1 ? ? C DC 3 D DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog5 hydrog ? ? B DC 3 N4 ? ? ? 1_555 C DG 14 O6 ? ? C DC 3 D DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog6 hydrog ? ? B DC 3 O2 ? ? ? 1_555 C DG 14 N2 ? ? C DC 3 D DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog7 hydrog ? ? B DC 4 N3 ? ? ? 1_555 C DG 13 N1 ? ? C DC 4 D DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog8 hydrog ? ? B DC 4 N4 ? ? ? 1_555 C DG 13 O6 ? ? C DC 4 D DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog9 hydrog ? ? B DC 4 O2 ? ? ? 1_555 C DG 13 N2 ? ? C DC 4 D DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog10 hydrog ? ? B DT 5 N3 ? ? ? 1_555 C DA 12 N1 ? ? C DT 5 D DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog11 hydrog ? ? B DT 5 O4 ? ? ? 1_555 C DA 12 N6 ? ? C DT 5 D DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog12 hydrog ? ? B DT 6 N3 ? ? ? 1_555 C DA 11 N1 ? ? C DT 6 D DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog13 hydrog ? ? B DT 6 O4 ? ? ? 1_555 C DA 11 N6 ? ? C DT 6 D DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog14 hydrog ? ? B DT 7 N3 ? ? ? 1_555 C DA 10 N1 ? ? C DT 7 D DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog15 hydrog ? ? B DT 7 O4 ? ? ? 1_555 C DA 10 N6 ? ? C DT 7 D DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog16 hydrog ? ? B DG 8 N1 ? ? ? 1_555 C DC 9 N3 ? ? C DG 8 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog17 hydrog ? ? B DG 8 N2 ? ? ? 1_555 C DC 9 O2 ? ? C DG 8 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog18 hydrog ? ? B DG 8 O6 ? ? ? 1_555 C DC 9 N4 ? ? C DG 8 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog19 hydrog ? ? B DA 9 N1 ? ? ? 1_555 C DT 8 N3 ? ? C DA 9 D DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog20 hydrog ? ? B DA 9 N6 ? ? ? 1_555 C DT 8 O4 ? ? C DA 9 D DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog21 hydrog ? ? B DC 10 N3 ? ? ? 1_555 C DG 7 N1 ? ? C DC 10 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog22 hydrog ? ? B DC 10 N4 ? ? ? 1_555 C DG 7 O6 ? ? C DC 10 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog23 hydrog ? ? B DC 10 O2 ? ? ? 1_555 C DG 7 N2 ? ? C DC 10 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog24 hydrog ? ? B DC 11 N3 ? ? ? 1_555 C DG 6 N1 ? ? C DC 11 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog25 hydrog ? ? B DC 11 N4 ? ? ? 1_555 C DG 6 O6 ? ? C DC 11 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog26 hydrog ? ? B DC 11 O2 ? ? ? 1_555 C DG 6 N2 ? ? C DC 11 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog27 hydrog ? ? B DA 12 N1 ? ? ? 1_555 C DT 5 N3 ? ? C DA 12 D DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog28 hydrog ? ? B DA 12 N6 ? ? ? 1_555 C DT 5 O4 ? ? C DA 12 D DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog29 hydrog ? ? B DG 13 N1 ? ? ? 1_555 C DC 4 N3 ? ? C DG 13 D DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog30 hydrog ? ? B DG 13 N2 ? ? ? 1_555 C DC 4 O2 ? ? C DG 13 D DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog31 hydrog ? ? B DG 13 O6 ? ? ? 1_555 C DC 4 N4 ? ? C DG 13 D DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog32 hydrog ? ? B DC 14 N3 ? ? ? 1_555 C DG 3 N1 ? ? C DC 14 D DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog33 hydrog ? ? B DC 14 N4 ? ? ? 1_555 C DG 3 O6 ? ? C DC 14 D DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog34 hydrog ? ? B DC 14 O2 ? ? ? 1_555 C DG 3 N2 ? ? C DC 14 D DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog35 hydrog ? ? B DG 15 N1 ? ? ? 1_555 C DC 2 N3 ? ? C DG 15 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog36 hydrog ? ? B DG 15 N2 ? ? ? 1_555 C DC 2 O2 ? ? C DG 15 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog37 hydrog ? ? B DG 15 O6 ? ? ? 1_555 C DC 2 N4 ? ? C DG 15 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog38 hydrog ? ? E DG 2 N1 ? ? ? 1_555 F DC 15 N3 ? ? G DG 2 H DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog39 hydrog ? ? E DG 2 N2 ? ? ? 1_555 F DC 15 O2 ? ? G DG 2 H DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog40 hydrog ? ? E DG 2 O6 ? ? ? 1_555 F DC 15 N4 ? ? G DG 2 H DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog41 hydrog ? ? E DC 3 N3 ? ? ? 1_555 F DG 14 N1 ? ? G DC 3 H DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog42 hydrog ? ? E DC 3 N4 ? ? ? 1_555 F DG 14 O6 ? ? G DC 3 H DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog43 hydrog ? ? E DC 3 O2 ? ? ? 1_555 F DG 14 N2 ? ? G DC 3 H DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog44 hydrog ? ? E DC 4 N3 ? ? ? 1_555 F DG 13 N1 ? ? G DC 4 H DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog45 hydrog ? ? E DC 4 N4 ? ? ? 1_555 F DG 13 O6 ? ? G DC 4 H DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog46 hydrog ? ? E DC 4 O2 ? ? ? 1_555 F DG 13 N2 ? ? G DC 4 H DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog47 hydrog ? ? E DT 5 N3 ? ? ? 1_555 F DA 12 N1 ? ? G DT 5 H DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog48 hydrog ? ? E DT 5 O4 ? ? ? 1_555 F DA 12 N6 ? ? G DT 5 H DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog49 hydrog ? ? E DT 6 N3 ? ? ? 1_555 F DA 11 N1 ? ? G DT 6 H DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog50 hydrog ? ? E DT 6 O4 ? ? ? 1_555 F DA 11 N6 ? ? G DT 6 H DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog51 hydrog ? ? E DT 7 N3 ? ? ? 1_555 F DA 10 N1 ? ? G DT 7 H DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog52 hydrog ? ? E DT 7 O4 ? ? ? 1_555 F DA 10 N6 ? ? G DT 7 H DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog53 hydrog ? ? E DG 8 N1 ? ? ? 1_555 F DC 9 N3 ? ? G DG 8 H DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog54 hydrog ? ? E DG 8 N2 ? ? ? 1_555 F DC 9 O2 ? ? G DG 8 H DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog55 hydrog ? ? E DG 8 O6 ? ? ? 1_555 F DC 9 N4 ? ? G DG 8 H DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog56 hydrog ? ? E DA 9 N1 ? ? ? 1_555 F DT 8 N3 ? ? G DA 9 H DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog57 hydrog ? ? E DA 9 N6 ? ? ? 1_555 F DT 8 O4 ? ? G DA 9 H DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog58 hydrog ? ? E DC 10 N3 ? ? ? 1_555 F DG 7 N1 ? ? G DC 10 H DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog59 hydrog ? ? E DC 10 N4 ? ? ? 1_555 F DG 7 O6 ? ? G DC 10 H DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog60 hydrog ? ? E DC 10 O2 ? ? ? 1_555 F DG 7 N2 ? ? G DC 10 H DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog61 hydrog ? ? E DC 11 N3 ? ? ? 1_555 F DG 6 N1 ? ? G DC 11 H DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog62 hydrog ? ? E DC 11 N4 ? ? ? 1_555 F DG 6 O6 ? ? G DC 11 H DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog63 hydrog ? ? E DC 11 O2 ? ? ? 1_555 F DG 6 N2 ? ? G DC 11 H DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog64 hydrog ? ? E DA 12 N1 ? ? ? 1_555 F DT 5 N3 ? ? G DA 12 H DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog65 hydrog ? ? E DA 12 N6 ? ? ? 1_555 F DT 5 O4 ? ? G DA 12 H DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog66 hydrog ? ? E DG 13 N1 ? ? ? 1_555 F DC 4 N3 ? ? G DG 13 H DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog67 hydrog ? ? E DG 13 N2 ? ? ? 1_555 F DC 4 O2 ? ? G DG 13 H DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog68 hydrog ? ? E DG 13 O6 ? ? ? 1_555 F DC 4 N4 ? ? G DG 13 H DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog69 hydrog ? ? E DC 14 N3 ? ? ? 1_555 F DG 3 N1 ? ? G DC 14 H DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog70 hydrog ? ? E DC 14 N4 ? ? ? 1_555 F DG 3 O6 ? ? G DC 14 H DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog71 hydrog ? ? E DC 14 O2 ? ? ? 1_555 F DG 3 N2 ? ? G DC 14 H DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog72 hydrog ? ? E DG 15 N1 ? ? ? 1_555 F DC 2 N3 ? ? G DG 15 H DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog73 hydrog ? ? E DG 15 N2 ? ? ? 1_555 F DC 2 O2 ? ? G DG 15 H DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog74 hydrog ? ? E DG 15 O6 ? ? ? 1_555 F DC 2 N4 ? ? G DG 15 H DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 8 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA1 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLY A 25 ? VAL A 29 ? GLY B 282 VAL B 286 AA1 2 TYR A 34 ? LYS A 40 ? TYR B 291 LYS B 297 AA1 3 LYS A 49 ? ARG A 54 ? LYS B 306 ARG B 311 AA1 4 ILE A 60 ? LYS A 66 ? ILE B 317 LYS B 323 AA1 5 ILE D 60 ? LYS D 66 ? ILE F 317 LYS F 323 AA1 6 LYS D 49 ? SER D 55 ? LYS F 306 SER F 312 AA1 7 ARG D 36 ? CYS D 41 ? ARG F 293 CYS F 298 AA1 8 TRP D 21 ? LYS D 27 ? TRP F 278 LYS F 284 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LYS A 27 ? N LYS B 284 O ARG A 36 ? O ARG B 293 AA1 2 3 N SER A 37 ? N SER B 294 O VAL A 52 ? O VAL B 309 AA1 3 4 N GLU A 53 ? N GLU B 310 O THR A 61 ? O THR B 318 AA1 4 5 N ILE A 63 ? N ILE B 320 O ILE D 63 ? O ILE F 320 AA1 5 6 O LYS D 66 ? O LYS F 323 N LYS D 49 ? N LYS F 306 AA1 6 7 O VAL D 52 ? O VAL F 309 N SER D 37 ? N SER F 294 AA1 7 8 O TYR D 38 ? O TYR F 295 N TYR D 24 ? N TYR F 281 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B ZN 401 ? 4 'binding site for residue ZN B 401' AC2 Software F ZN 401 ? 4 'binding site for residue ZN F 401' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 41 ? CYS B 298 . ? 1_555 ? 2 AC1 4 CYS A 46 ? CYS B 303 . ? 1_555 ? 3 AC1 4 HIS A 69 ? HIS B 326 . ? 1_555 ? 4 AC1 4 HIS A 71 ? HIS B 328 . ? 1_555 ? 5 AC2 4 CYS D 41 ? CYS F 298 . ? 1_555 ? 6 AC2 4 CYS D 46 ? CYS F 303 . ? 1_555 ? 7 AC2 4 HIS D 69 ? HIS F 326 . ? 1_555 ? 8 AC2 4 HIS D 71 ? HIS F 328 . ? 1_555 ? # _atom_sites.entry_id 6J4F _atom_sites.fract_transf_matrix[1][1] 0.026247 _atom_sites.fract_transf_matrix[1][2] 0.003455 _atom_sites.fract_transf_matrix[1][3] -0.001036 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020883 _atom_sites.fract_transf_matrix[2][3] 0.001233 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014513 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 258 ? ? ? B . n A 1 2 GLU 2 259 ? ? ? B . n A 1 3 GLN 3 260 ? ? ? B . n A 1 4 ARG 4 261 ? ? ? B . n A 1 5 ARG 5 262 ? ? ? B . n A 1 6 GLY 6 263 ? ? ? B . n A 1 7 ASP 7 264 ? ? ? B . n A 1 8 SER 8 265 ? ? ? B . n A 1 9 MET 9 266 ? ? ? B . n A 1 10 ALA 10 267 ? ? ? B . n A 1 11 GLY 11 268 ? ? ? B . n A 1 12 GLY 12 269 ? ? ? B . n A 1 13 ALA 13 270 270 ALA ALA B . n A 1 14 PRO 14 271 271 PRO PRO B . n A 1 15 ALA 15 272 272 ALA ALA B . n A 1 16 GLU 16 273 273 GLU GLU B . n A 1 17 ASP 17 274 274 ASP ASP B . n A 1 18 GLY 18 275 275 GLY GLY B . n A 1 19 TYR 19 276 276 TYR TYR B . n A 1 20 ASN 20 277 277 ASN ASN B . n A 1 21 TRP 21 278 278 TRP TRP B . n A 1 22 ARG 22 279 279 ARG ARG B . n A 1 23 LYS 23 280 280 LYS LYS B . n A 1 24 TYR 24 281 281 TYR TYR B . n A 1 25 GLY 25 282 282 GLY GLY B . n A 1 26 GLN 26 283 283 GLN GLN B . n A 1 27 LYS 27 284 284 LYS LYS B . n A 1 28 LEU 28 285 285 LEU LEU B . n A 1 29 VAL 29 286 286 VAL VAL B . n A 1 30 LYS 30 287 287 LYS LYS B . n A 1 31 GLY 31 288 288 GLY GLY B . n A 1 32 SER 32 289 289 SER SER B . n A 1 33 GLU 33 290 290 GLU GLU B . n A 1 34 TYR 34 291 291 TYR TYR B . n A 1 35 PRO 35 292 292 PRO PRO B . n A 1 36 ARG 36 293 293 ARG ARG B . n A 1 37 SER 37 294 294 SER SER B . n A 1 38 TYR 38 295 295 TYR TYR B . n A 1 39 TYR 39 296 296 TYR TYR B . n A 1 40 LYS 40 297 297 LYS LYS B . n A 1 41 CYS 41 298 298 CYS CYS B . n A 1 42 THR 42 299 299 THR THR B . n A 1 43 ASN 43 300 300 ASN ASN B . n A 1 44 PRO 44 301 301 PRO PRO B . n A 1 45 ASN 45 302 302 ASN ASN B . n A 1 46 CYS 46 303 303 CYS CYS B . n A 1 47 GLN 47 304 304 GLN GLN B . n A 1 48 VAL 48 305 305 VAL VAL B . n A 1 49 LYS 49 306 306 LYS LYS B . n A 1 50 LYS 50 307 307 LYS LYS B . n A 1 51 LYS 51 308 308 LYS LYS B . n A 1 52 VAL 52 309 309 VAL VAL B . n A 1 53 GLU 53 310 310 GLU GLU B . n A 1 54 ARG 54 311 311 ARG ARG B . n A 1 55 SER 55 312 312 SER SER B . n A 1 56 ARG 56 313 313 ARG ARG B . n A 1 57 GLU 57 314 314 GLU GLU B . n A 1 58 GLY 58 315 315 GLY GLY B . n A 1 59 HIS 59 316 316 HIS HIS B . n A 1 60 ILE 60 317 317 ILE ILE B . n A 1 61 THR 61 318 318 THR THR B . n A 1 62 GLU 62 319 319 GLU GLU B . n A 1 63 ILE 63 320 320 ILE ILE B . n A 1 64 ILE 64 321 321 ILE ILE B . n A 1 65 TYR 65 322 322 TYR TYR B . n A 1 66 LYS 66 323 323 LYS LYS B . n A 1 67 GLY 67 324 324 GLY GLY B . n A 1 68 ALA 68 325 325 ALA ALA B . n A 1 69 HIS 69 326 326 HIS HIS B . n A 1 70 ASN 70 327 327 ASN ASN B . n A 1 71 HIS 71 328 328 HIS HIS B . n A 1 72 LEU 72 329 329 LEU LEU B . n A 1 73 LYS 73 330 330 LYS LYS B . n A 1 74 PRO 74 331 331 PRO PRO B . n A 1 75 LEU 75 332 332 LEU LEU B . n A 1 76 GLU 76 333 ? ? ? B . n A 1 77 HIS 77 334 ? ? ? B . n A 1 78 HIS 78 335 ? ? ? B . n A 1 79 HIS 79 336 ? ? ? B . n A 1 80 HIS 80 337 ? ? ? B . n A 1 81 HIS 81 338 ? ? ? B . n A 1 82 HIS 82 339 ? ? ? B . n B 2 1 DA 1 1 1 DA DA C . n B 2 2 DG 2 2 2 DG DG C . n B 2 3 DC 3 3 3 DC DC C . n B 2 4 DC 4 4 4 DC DC C . n B 2 5 DT 5 5 5 DT DT C . n B 2 6 DT 6 6 6 DT DT C . n B 2 7 DT 7 7 7 DT DT C . n B 2 8 DG 8 8 8 DG DG C . n B 2 9 DA 9 9 9 DA DA C . n B 2 10 DC 10 10 10 DC DC C . n B 2 11 DC 11 11 11 DC DC C . n B 2 12 DA 12 12 12 DA DA C . n B 2 13 DG 13 13 13 DG DG C . n B 2 14 DC 14 14 14 DC DC C . n B 2 15 DG 15 15 15 DG DG C . n C 3 1 DT 1 1 1 DT DT D . n C 3 2 DC 2 2 2 DC DC D . n C 3 3 DG 3 3 3 DG DG D . n C 3 4 DC 4 4 4 DC DC D . n C 3 5 DT 5 5 5 DT DT D . n C 3 6 DG 6 6 6 DG DG D . n C 3 7 DG 7 7 7 DG DG D . n C 3 8 DT 8 8 8 DT DT D . n C 3 9 DC 9 9 9 DC DC D . n C 3 10 DA 10 10 10 DA DA D . n C 3 11 DA 11 11 11 DA DA D . n C 3 12 DA 12 12 12 DA DA D . n C 3 13 DG 13 13 13 DG DG D . n C 3 14 DG 14 14 14 DG DG D . n C 3 15 DC 15 15 15 DC DC D . n D 1 1 MET 1 258 ? ? ? F . n D 1 2 GLU 2 259 ? ? ? F . n D 1 3 GLN 3 260 ? ? ? F . n D 1 4 ARG 4 261 ? ? ? F . n D 1 5 ARG 5 262 ? ? ? F . n D 1 6 GLY 6 263 ? ? ? F . n D 1 7 ASP 7 264 ? ? ? F . n D 1 8 SER 8 265 ? ? ? F . n D 1 9 MET 9 266 ? ? ? F . n D 1 10 ALA 10 267 ? ? ? F . n D 1 11 GLY 11 268 ? ? ? F . n D 1 12 GLY 12 269 ? ? ? F . n D 1 13 ALA 13 270 270 ALA ALA F . n D 1 14 PRO 14 271 271 PRO PRO F . n D 1 15 ALA 15 272 272 ALA ALA F . n D 1 16 GLU 16 273 273 GLU GLU F . n D 1 17 ASP 17 274 274 ASP ASP F . n D 1 18 GLY 18 275 275 GLY GLY F . n D 1 19 TYR 19 276 276 TYR TYR F . n D 1 20 ASN 20 277 277 ASN ASN F . n D 1 21 TRP 21 278 278 TRP TRP F . n D 1 22 ARG 22 279 279 ARG ARG F . n D 1 23 LYS 23 280 280 LYS LYS F . n D 1 24 TYR 24 281 281 TYR TYR F . n D 1 25 GLY 25 282 282 GLY GLY F . n D 1 26 GLN 26 283 283 GLN GLN F . n D 1 27 LYS 27 284 284 LYS LYS F . n D 1 28 LEU 28 285 285 LEU LEU F . n D 1 29 VAL 29 286 286 VAL VAL F . n D 1 30 LYS 30 287 287 LYS LYS F . n D 1 31 GLY 31 288 288 GLY GLY F . n D 1 32 SER 32 289 289 SER SER F . n D 1 33 GLU 33 290 290 GLU GLU F . n D 1 34 TYR 34 291 291 TYR TYR F . n D 1 35 PRO 35 292 292 PRO PRO F . n D 1 36 ARG 36 293 293 ARG ARG F . n D 1 37 SER 37 294 294 SER SER F . n D 1 38 TYR 38 295 295 TYR TYR F . n D 1 39 TYR 39 296 296 TYR TYR F . n D 1 40 LYS 40 297 297 LYS LYS F . n D 1 41 CYS 41 298 298 CYS CYS F . n D 1 42 THR 42 299 299 THR THR F . n D 1 43 ASN 43 300 300 ASN ASN F . n D 1 44 PRO 44 301 301 PRO PRO F . n D 1 45 ASN 45 302 302 ASN ASN F . n D 1 46 CYS 46 303 303 CYS CYS F . n D 1 47 GLN 47 304 304 GLN GLN F . n D 1 48 VAL 48 305 305 VAL VAL F . n D 1 49 LYS 49 306 306 LYS LYS F . n D 1 50 LYS 50 307 307 LYS LYS F . n D 1 51 LYS 51 308 308 LYS LYS F . n D 1 52 VAL 52 309 309 VAL VAL F . n D 1 53 GLU 53 310 310 GLU GLU F . n D 1 54 ARG 54 311 311 ARG ARG F . n D 1 55 SER 55 312 312 SER SER F . n D 1 56 ARG 56 313 313 ARG ARG F . n D 1 57 GLU 57 314 314 GLU GLU F . n D 1 58 GLY 58 315 315 GLY GLY F . n D 1 59 HIS 59 316 316 HIS HIS F . n D 1 60 ILE 60 317 317 ILE ILE F . n D 1 61 THR 61 318 318 THR THR F . n D 1 62 GLU 62 319 319 GLU GLU F . n D 1 63 ILE 63 320 320 ILE ILE F . n D 1 64 ILE 64 321 321 ILE ILE F . n D 1 65 TYR 65 322 322 TYR TYR F . n D 1 66 LYS 66 323 323 LYS LYS F . n D 1 67 GLY 67 324 324 GLY GLY F . n D 1 68 ALA 68 325 325 ALA ALA F . n D 1 69 HIS 69 326 326 HIS HIS F . n D 1 70 ASN 70 327 327 ASN ASN F . n D 1 71 HIS 71 328 328 HIS HIS F . n D 1 72 LEU 72 329 329 LEU LEU F . n D 1 73 LYS 73 330 330 LYS LYS F . n D 1 74 PRO 74 331 331 PRO PRO F . n D 1 75 LEU 75 332 332 LEU LEU F . n D 1 76 GLU 76 333 ? ? ? F . n D 1 77 HIS 77 334 ? ? ? F . n D 1 78 HIS 78 335 ? ? ? F . n D 1 79 HIS 79 336 ? ? ? F . n D 1 80 HIS 80 337 ? ? ? F . n D 1 81 HIS 81 338 ? ? ? F . n D 1 82 HIS 82 339 ? ? ? F . n E 2 1 DA 1 1 1 DA DA G . n E 2 2 DG 2 2 2 DG DG G . n E 2 3 DC 3 3 3 DC DC G . n E 2 4 DC 4 4 4 DC DC G . n E 2 5 DT 5 5 5 DT DT G . n E 2 6 DT 6 6 6 DT DT G . n E 2 7 DT 7 7 7 DT DT G . n E 2 8 DG 8 8 8 DG DG G . n E 2 9 DA 9 9 9 DA DA G . n E 2 10 DC 10 10 10 DC DC G . n E 2 11 DC 11 11 11 DC DC G . n E 2 12 DA 12 12 12 DA DA G . n E 2 13 DG 13 13 13 DG DG G . n E 2 14 DC 14 14 14 DC DC G . n E 2 15 DG 15 15 15 DG DG G . n F 3 1 DT 1 1 1 DT DT H . n F 3 2 DC 2 2 2 DC DC H . n F 3 3 DG 3 3 3 DG DG H . n F 3 4 DC 4 4 4 DC DC H . n F 3 5 DT 5 5 5 DT DT H . n F 3 6 DG 6 6 6 DG DG H . n F 3 7 DG 7 7 7 DG DG H . n F 3 8 DT 8 8 8 DT DT H . n F 3 9 DC 9 9 9 DC DC H . n F 3 10 DA 10 10 10 DA DA H . n F 3 11 DA 11 11 11 DA DA H . n F 3 12 DA 12 12 12 DA DA H . n F 3 13 DG 13 13 13 DG DG H . n F 3 14 DG 14 14 14 DG DG H . n F 3 15 DC 15 15 15 DC DC H . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 ZN 1 401 1 ZN ZN B . H 4 ZN 1 401 2 ZN ZN F . I 5 HOH 1 501 14 HOH HOH B . I 5 HOH 2 502 9 HOH HOH B . J 5 HOH 1 101 2 HOH HOH C . K 5 HOH 1 101 32 HOH HOH D . L 5 HOH 1 501 28 HOH HOH F . M 5 HOH 1 101 24 HOH HOH G . N 5 HOH 1 101 26 HOH HOH H . N 5 HOH 2 102 12 HOH HOH H . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA trimeric 3 2 author_and_software_defined_assembly PISA trimeric 3 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 D,E,F,H,L,M,N 2 1 A,B,C,G,I,J,K # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2560 ? 1 MORE -21 ? 1 'SSA (A^2)' 8780 ? 2 'ABSA (A^2)' 2600 ? 2 MORE -22 ? 2 'SSA (A^2)' 8930 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 46 ? B CYS 303 ? 1_555 ZN ? G ZN . ? B ZN 401 ? 1_555 ND1 ? A HIS 69 ? B HIS 326 ? 1_555 100.6 ? 2 SG ? A CYS 46 ? B CYS 303 ? 1_555 ZN ? G ZN . ? B ZN 401 ? 1_555 NE2 ? A HIS 71 ? B HIS 328 ? 1_555 105.8 ? 3 ND1 ? A HIS 69 ? B HIS 326 ? 1_555 ZN ? G ZN . ? B ZN 401 ? 1_555 NE2 ? A HIS 71 ? B HIS 328 ? 1_555 99.4 ? 4 SG ? D CYS 41 ? F CYS 298 ? 1_555 ZN ? H ZN . ? F ZN 401 ? 1_555 SG ? D CYS 46 ? F CYS 303 ? 1_555 117.5 ? 5 SG ? D CYS 41 ? F CYS 298 ? 1_555 ZN ? H ZN . ? F ZN 401 ? 1_555 ND1 ? D HIS 69 ? F HIS 326 ? 1_555 110.3 ? 6 SG ? D CYS 46 ? F CYS 303 ? 1_555 ZN ? H ZN . ? F ZN 401 ? 1_555 ND1 ? D HIS 69 ? F HIS 326 ? 1_555 115.9 ? 7 SG ? D CYS 41 ? F CYS 298 ? 1_555 ZN ? H ZN . ? F ZN 401 ? 1_555 NE2 ? D HIS 71 ? F HIS 328 ? 1_555 102.6 ? 8 SG ? D CYS 46 ? F CYS 303 ? 1_555 ZN ? H ZN . ? F ZN 401 ? 1_555 NE2 ? D HIS 71 ? F HIS 328 ? 1_555 97.6 ? 9 ND1 ? D HIS 69 ? F HIS 326 ? 1_555 ZN ? H ZN . ? F ZN 401 ? 1_555 NE2 ? D HIS 71 ? F HIS 328 ? 1_555 111.0 ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2020-01-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_refine_tls.id 1 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 54.5719 _pdbx_refine_tls.origin_y 1.9362 _pdbx_refine_tls.origin_z -27.3918 _pdbx_refine_tls.T[1][1] 0.3588 _pdbx_refine_tls.T[1][1]_esd ? _pdbx_refine_tls.T[1][2] -0.0451 _pdbx_refine_tls.T[1][2]_esd ? _pdbx_refine_tls.T[1][3] -0.0639 _pdbx_refine_tls.T[1][3]_esd ? _pdbx_refine_tls.T[2][2] 0.3928 _pdbx_refine_tls.T[2][2]_esd ? _pdbx_refine_tls.T[2][3] 0.1007 _pdbx_refine_tls.T[2][3]_esd ? _pdbx_refine_tls.T[3][3] 0.4087 _pdbx_refine_tls.T[3][3]_esd ? _pdbx_refine_tls.L[1][1] 2.5759 _pdbx_refine_tls.L[1][1]_esd ? _pdbx_refine_tls.L[1][2] -1.3593 _pdbx_refine_tls.L[1][2]_esd ? _pdbx_refine_tls.L[1][3] -0.6698 _pdbx_refine_tls.L[1][3]_esd ? _pdbx_refine_tls.L[2][2] 2.0192 _pdbx_refine_tls.L[2][2]_esd ? _pdbx_refine_tls.L[2][3] 0.8730 _pdbx_refine_tls.L[2][3]_esd ? _pdbx_refine_tls.L[3][3] 2.3544 _pdbx_refine_tls.L[3][3]_esd ? _pdbx_refine_tls.S[1][1] 0.2768 _pdbx_refine_tls.S[1][1]_esd ? _pdbx_refine_tls.S[1][2] 0.2667 _pdbx_refine_tls.S[1][2]_esd ? _pdbx_refine_tls.S[1][3] -0.0502 _pdbx_refine_tls.S[1][3]_esd ? _pdbx_refine_tls.S[2][1] -0.3098 _pdbx_refine_tls.S[2][1]_esd ? _pdbx_refine_tls.S[2][2] -0.2174 _pdbx_refine_tls.S[2][2]_esd ? _pdbx_refine_tls.S[2][3] 0.0644 _pdbx_refine_tls.S[2][3]_esd ? _pdbx_refine_tls.S[3][1] -0.0291 _pdbx_refine_tls.S[3][1]_esd ? _pdbx_refine_tls.S[3][2] -0.0102 _pdbx_refine_tls.S[3][2]_esd ? _pdbx_refine_tls.S[3][3] -0.0475 _pdbx_refine_tls.S[3][3]_esd ? # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details all # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 5 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 "O3'" _pdbx_validate_rmsd_bond.auth_asym_id_1 C _pdbx_validate_rmsd_bond.auth_comp_id_1 DA _pdbx_validate_rmsd_bond.auth_seq_id_1 12 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 "C3'" _pdbx_validate_rmsd_bond.auth_asym_id_2 C _pdbx_validate_rmsd_bond.auth_comp_id_2 DA _pdbx_validate_rmsd_bond.auth_seq_id_2 12 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.383 _pdbx_validate_rmsd_bond.bond_target_value 1.419 _pdbx_validate_rmsd_bond.bond_deviation -0.036 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.006 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN B 327 ? ? -98.02 40.71 2 1 HIS B 328 ? ? 175.09 158.94 3 1 ASP F 274 ? ? -140.07 12.80 4 1 ASN F 302 ? ? 84.36 -0.10 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B LEU 332 ? CG ? A LEU 75 CG 2 1 Y 1 B LEU 332 ? CD1 ? A LEU 75 CD1 3 1 Y 1 B LEU 332 ? CD2 ? A LEU 75 CD2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B MET 258 ? A MET 1 2 1 Y 1 B GLU 259 ? A GLU 2 3 1 Y 1 B GLN 260 ? A GLN 3 4 1 Y 1 B ARG 261 ? A ARG 4 5 1 Y 1 B ARG 262 ? A ARG 5 6 1 Y 1 B GLY 263 ? A GLY 6 7 1 Y 1 B ASP 264 ? A ASP 7 8 1 Y 1 B SER 265 ? A SER 8 9 1 Y 1 B MET 266 ? A MET 9 10 1 Y 1 B ALA 267 ? A ALA 10 11 1 Y 1 B GLY 268 ? A GLY 11 12 1 Y 1 B GLY 269 ? A GLY 12 13 1 Y 1 B GLU 333 ? A GLU 76 14 1 Y 1 B HIS 334 ? A HIS 77 15 1 Y 1 B HIS 335 ? A HIS 78 16 1 Y 1 B HIS 336 ? A HIS 79 17 1 Y 1 B HIS 337 ? A HIS 80 18 1 Y 1 B HIS 338 ? A HIS 81 19 1 Y 1 B HIS 339 ? A HIS 82 20 1 Y 1 F MET 258 ? D MET 1 21 1 Y 1 F GLU 259 ? D GLU 2 22 1 Y 1 F GLN 260 ? D GLN 3 23 1 Y 1 F ARG 261 ? D ARG 4 24 1 Y 1 F ARG 262 ? D ARG 5 25 1 Y 1 F GLY 263 ? D GLY 6 26 1 Y 1 F ASP 264 ? D ASP 7 27 1 Y 1 F SER 265 ? D SER 8 28 1 Y 1 F MET 266 ? D MET 9 29 1 Y 1 F ALA 267 ? D ALA 10 30 1 Y 1 F GLY 268 ? D GLY 11 31 1 Y 1 F GLY 269 ? D GLY 12 32 1 Y 1 F GLU 333 ? D GLU 76 33 1 Y 1 F HIS 334 ? D HIS 77 34 1 Y 1 F HIS 335 ? D HIS 78 35 1 Y 1 F HIS 336 ? D HIS 79 36 1 Y 1 F HIS 337 ? D HIS 80 37 1 Y 1 F HIS 338 ? D HIS 81 38 1 Y 1 F HIS 339 ? D HIS 82 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 6J4F 'double helix' 6J4F 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 2 1_555 C DC 15 1_555 -0.152 -0.025 -0.002 6.634 -6.302 -1.484 1 C_DG2:DC15_D C 2 ? D 15 ? 19 1 1 B DC 3 1_555 C DG 14 1_555 0.323 0.030 0.105 5.994 -7.813 2.354 2 C_DC3:DG14_D C 3 ? D 14 ? 19 1 1 B DC 4 1_555 C DG 13 1_555 0.310 -0.101 0.214 -4.032 -17.667 6.729 3 C_DC4:DG13_D C 4 ? D 13 ? 19 1 1 B DT 5 1_555 C DA 12 1_555 -0.031 -0.269 0.240 -1.973 -9.252 0.081 4 C_DT5:DA12_D C 5 ? D 12 ? 20 1 1 B DT 6 1_555 C DA 11 1_555 -0.007 -0.243 0.186 0.389 -9.930 0.294 5 C_DT6:DA11_D C 6 ? D 11 ? 20 1 1 B DT 7 1_555 C DA 10 1_555 -0.245 -0.016 0.008 -4.524 -5.958 5.852 6 C_DT7:DA10_D C 7 ? D 10 ? 20 1 1 B DG 8 1_555 C DC 9 1_555 -0.314 -0.052 0.158 13.206 -7.112 -3.531 7 C_DG8:DC9_D C 8 ? D 9 ? 19 1 1 B DA 9 1_555 C DT 8 1_555 -0.052 -0.019 0.597 14.502 -15.544 0.479 8 C_DA9:DT8_D C 9 ? D 8 ? 20 1 1 B DC 10 1_555 C DG 7 1_555 0.308 -0.280 0.176 3.339 -12.968 -1.189 9 C_DC10:DG7_D C 10 ? D 7 ? 19 1 1 B DC 11 1_555 C DG 6 1_555 -0.133 -0.175 0.101 -6.904 -5.127 1.665 10 C_DC11:DG6_D C 11 ? D 6 ? 19 1 1 B DA 12 1_555 C DT 5 1_555 -0.413 -0.165 -0.007 3.731 -8.426 2.353 11 C_DA12:DT5_D C 12 ? D 5 ? 20 1 1 B DG 13 1_555 C DC 4 1_555 -0.207 -0.070 0.047 3.579 -7.255 -1.405 12 C_DG13:DC4_D C 13 ? D 4 ? 19 1 1 B DC 14 1_555 C DG 3 1_555 -0.015 -0.092 -0.286 1.741 -12.647 1.672 13 C_DC14:DG3_D C 14 ? D 3 ? 19 1 1 B DG 15 1_555 C DC 2 1_555 0.053 -0.323 -0.072 2.569 -4.154 4.267 14 C_DG15:DC2_D C 15 ? D 2 ? 19 1 1 E DG 2 1_555 F DC 15 1_555 -0.245 -0.207 0.401 1.063 -5.251 -4.707 15 G_DG2:DC15_H G 2 ? H 15 ? 19 1 1 E DC 3 1_555 F DG 14 1_555 0.440 0.146 -0.360 9.418 -6.358 2.019 16 G_DC3:DG14_H G 3 ? H 14 ? 19 1 1 E DC 4 1_555 F DG 13 1_555 -0.204 0.007 0.632 -10.384 -13.490 5.097 17 G_DC4:DG13_H G 4 ? H 13 ? 19 1 1 E DT 5 1_555 F DA 12 1_555 -0.555 0.106 0.330 -2.269 -7.002 0.086 18 G_DT5:DA12_H G 5 ? H 12 ? 20 1 1 E DT 6 1_555 F DA 11 1_555 0.149 -0.212 -0.039 0.752 -22.083 -2.806 19 G_DT6:DA11_H G 6 ? H 11 ? 20 1 1 E DT 7 1_555 F DA 10 1_555 -0.140 -0.238 0.123 0.817 -7.638 9.809 20 G_DT7:DA10_H G 7 ? H 10 ? 20 1 1 E DG 8 1_555 F DC 9 1_555 -0.075 -0.108 0.464 19.510 -5.908 -1.063 21 G_DG8:DC9_H G 8 ? H 9 ? 19 1 1 E DA 9 1_555 F DT 8 1_555 0.224 -0.086 0.140 7.741 -9.841 3.461 22 G_DA9:DT8_H G 9 ? H 8 ? 20 1 1 E DC 10 1_555 F DG 7 1_555 0.122 -0.249 0.004 4.448 -14.738 -2.632 23 G_DC10:DG7_H G 10 ? H 7 ? 19 1 1 E DC 11 1_555 F DG 6 1_555 -0.098 -0.172 0.456 -11.909 -7.265 1.682 24 G_DC11:DG6_H G 11 ? H 6 ? 19 1 1 E DA 12 1_555 F DT 5 1_555 -0.064 0.036 0.210 3.088 0.499 3.231 25 G_DA12:DT5_H G 12 ? H 5 ? 20 1 1 E DG 13 1_555 F DC 4 1_555 0.572 0.190 0.233 11.042 -9.354 8.117 26 G_DG13:DC4_H G 13 ? H 4 ? 19 1 1 E DC 14 1_555 F DG 3 1_555 1.115 0.098 -0.093 14.353 -20.152 10.903 27 G_DC14:DG3_H G 14 ? H 3 ? 19 1 1 E DG 15 1_555 F DC 2 1_555 -0.338 -0.197 0.302 6.637 -11.499 5.705 28 G_DG15:DC2_H G 15 ? H 2 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 2 1_555 C DC 15 1_555 B DC 3 1_555 C DG 14 1_555 0.153 -0.073 3.381 -0.896 -2.422 35.699 0.242 -0.382 3.374 -3.944 1.459 35.789 1 CC_DG2DC3:DG14DC15_DD C 2 ? D 15 ? C 3 ? D 14 ? 1 B DC 3 1_555 C DG 14 1_555 B DC 4 1_555 C DG 13 1_555 0.451 -0.243 3.414 0.687 1.412 38.490 -0.551 -0.596 3.411 2.141 -1.042 38.520 2 CC_DC3DC4:DG13DG14_DD C 3 ? D 14 ? C 4 ? D 13 ? 1 B DC 4 1_555 C DG 13 1_555 B DT 5 1_555 C DA 12 1_555 -0.580 -0.187 3.311 1.129 9.822 31.554 -1.997 1.212 3.093 17.531 -2.016 33.029 3 CC_DC4DT5:DA12DG13_DD C 4 ? D 13 ? C 5 ? D 12 ? 1 B DT 5 1_555 C DA 12 1_555 B DT 6 1_555 C DA 11 1_555 0.110 -0.322 3.265 1.836 -3.521 33.501 0.019 0.110 3.282 -6.081 -3.171 33.729 4 CC_DT5DT6:DA11DA12_DD C 5 ? D 12 ? C 6 ? D 11 ? 1 B DT 6 1_555 C DA 11 1_555 B DT 7 1_555 C DA 10 1_555 1.308 0.336 3.329 7.521 6.477 34.020 -0.468 -0.965 3.532 10.789 -12.527 35.397 5 CC_DT6DT7:DA10DA11_DD C 6 ? D 11 ? C 7 ? D 10 ? 1 B DT 7 1_555 C DA 10 1_555 B DG 8 1_555 C DC 9 1_555 -0.720 1.138 3.007 -0.476 9.923 28.683 0.215 1.283 3.224 19.312 0.926 30.320 6 CC_DT7DG8:DC9DA10_DD C 7 ? D 10 ? C 8 ? D 9 ? 1 B DG 8 1_555 C DC 9 1_555 B DA 9 1_555 C DT 8 1_555 0.381 -0.280 3.205 -4.247 -5.735 42.314 0.176 -0.936 3.164 -7.877 5.833 42.884 7 CC_DG8DA9:DT8DC9_DD C 8 ? D 9 ? C 9 ? D 8 ? 1 B DA 9 1_555 C DT 8 1_555 B DC 10 1_555 C DG 7 1_555 0.008 -0.727 3.546 0.164 -1.449 35.186 -0.967 0.013 3.572 -2.395 -0.270 35.215 8 CC_DA9DC10:DG7DT8_DD C 9 ? D 8 ? C 10 ? D 7 ? 1 B DC 10 1_555 C DG 7 1_555 B DC 11 1_555 C DG 6 1_555 0.221 -0.745 3.460 3.452 6.721 32.130 -2.498 0.220 3.248 11.938 -6.131 32.983 9 CC_DC10DC11:DG6DG7_DD C 10 ? D 7 ? C 11 ? D 6 ? 1 B DC 11 1_555 C DG 6 1_555 B DA 12 1_555 C DT 5 1_555 0.261 0.970 3.167 0.054 10.131 30.143 -0.119 -0.467 3.312 18.824 -0.100 31.763 10 CC_DC11DA12:DT5DG6_DD C 11 ? D 6 ? C 12 ? D 5 ? 1 B DA 12 1_555 C DT 5 1_555 B DG 13 1_555 C DC 4 1_555 -0.503 -0.086 3.215 -3.357 5.031 35.354 -0.853 0.342 3.205 8.210 5.478 35.852 11 CC_DA12DG13:DC4DT5_DD C 12 ? D 5 ? C 13 ? D 4 ? 1 B DG 13 1_555 C DC 4 1_555 B DC 14 1_555 C DG 3 1_555 -0.058 -0.288 3.380 3.534 0.004 36.941 -0.453 0.579 3.361 0.006 -5.561 37.104 12 CC_DG13DC14:DG3DC4_DD C 13 ? D 4 ? C 14 ? D 3 ? 1 B DC 14 1_555 C DG 3 1_555 B DG 15 1_555 C DC 2 1_555 0.432 1.422 3.297 0.315 6.466 39.851 1.301 -0.589 3.480 9.411 -0.459 40.352 13 CC_DC14DG15:DC2DG3_DD C 14 ? D 3 ? C 15 ? D 2 ? 1 E DG 2 1_555 F DC 15 1_555 E DC 3 1_555 F DG 14 1_555 0.466 0.096 3.238 5.740 -1.985 35.170 0.445 0.071 3.261 -3.255 -9.412 35.674 14 GG_DG2DC3:DG14DC15_HH G 2 ? H 15 ? G 3 ? H 14 ? 1 E DC 3 1_555 F DG 14 1_555 E DC 4 1_555 F DG 13 1_555 0.317 -0.466 3.703 -5.764 6.580 34.738 -1.812 -1.439 3.465 10.809 9.469 35.789 15 GG_DC3DC4:DG13DG14_HH G 3 ? H 14 ? G 4 ? H 13 ? 1 E DC 4 1_555 F DG 13 1_555 E DT 5 1_555 F DA 12 1_555 -0.604 -0.335 3.178 1.919 5.061 30.460 -1.568 1.488 3.041 9.538 -3.617 30.925 16 GG_DC4DT5:DA12DG13_HH G 4 ? H 13 ? G 5 ? H 12 ? 1 E DT 5 1_555 F DA 12 1_555 E DT 6 1_555 F DA 11 1_555 -0.241 -0.316 3.151 3.666 -0.473 37.731 -0.429 0.821 3.118 -0.730 -5.653 37.905 17 GG_DT5DT6:DA11DA12_HH G 5 ? H 12 ? G 6 ? H 11 ? 1 E DT 6 1_555 F DA 11 1_555 E DT 7 1_555 F DA 10 1_555 1.593 0.561 3.315 5.001 2.825 33.835 0.484 -1.873 3.541 4.810 -8.517 34.305 18 GG_DT6DT7:DA10DA11_HH G 6 ? H 11 ? G 7 ? H 10 ? 1 E DT 7 1_555 F DA 10 1_555 E DG 8 1_555 F DC 9 1_555 -0.739 1.008 3.005 -3.147 6.703 31.293 0.666 0.793 3.204 12.213 5.734 32.136 19 GG_DT7DG8:DC9DA10_HH G 7 ? H 10 ? G 8 ? H 9 ? 1 E DG 8 1_555 F DC 9 1_555 E DA 9 1_555 F DT 8 1_555 0.464 -0.259 3.472 1.732 -2.051 40.964 -0.132 -0.460 3.496 -2.926 -2.472 41.048 20 GG_DG8DA9:DT8DC9_HH G 8 ? H 9 ? G 9 ? H 8 ? 1 E DA 9 1_555 F DT 8 1_555 E DC 10 1_555 F DG 7 1_555 -0.169 -0.723 3.359 -1.194 -1.789 34.415 -0.933 0.093 3.395 -3.020 2.015 34.481 21 GG_DA9DC10:DG7DT8_HH G 9 ? H 8 ? G 10 ? H 7 ? 1 E DC 10 1_555 F DG 7 1_555 E DC 11 1_555 F DG 6 1_555 0.266 -0.931 3.654 -0.938 7.478 32.111 -3.021 -0.642 3.349 13.292 1.666 32.961 22 GG_DC10DC11:DG6DG7_HH G 10 ? H 7 ? G 11 ? H 6 ? 1 E DC 11 1_555 F DG 6 1_555 E DA 12 1_555 F DT 5 1_555 0.406 1.500 3.074 1.662 0.934 39.612 2.107 -0.415 3.121 1.378 -2.451 39.656 23 GG_DC11DA12:DT5DG6_HH G 11 ? H 6 ? G 12 ? H 5 ? 1 E DA 12 1_555 F DT 5 1_555 E DG 13 1_555 F DC 4 1_555 -0.683 0.413 3.140 -0.517 8.798 36.556 -0.479 0.995 3.161 13.781 0.810 37.568 24 GG_DA12DG13:DC4DT5_HH G 12 ? H 5 ? G 13 ? H 4 ? 1 E DG 13 1_555 F DC 4 1_555 E DC 14 1_555 F DG 3 1_555 0.573 0.312 3.244 3.264 2.465 32.649 0.128 -0.452 3.298 4.364 -5.778 32.897 25 GG_DG13DC14:DG3DC4_HH G 13 ? H 4 ? G 14 ? H 3 ? 1 E DC 14 1_555 F DG 3 1_555 E DG 15 1_555 F DC 2 1_555 -0.283 1.628 3.516 -1.602 0.674 36.894 2.472 0.213 3.553 1.064 2.529 36.934 26 GG_DC14DG15:DC2DG3_HH G 14 ? H 3 ? G 15 ? H 2 ? # _pdbx_audit_support.funding_organization 'National Natural Science Foundation of China' _pdbx_audit_support.country China _pdbx_audit_support.grant_number 31670740 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'ZINC ION' ZN 5 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #