HEADER APOPTOSIS 10-JAN-19 6J52 TITLE CRYSTAL STRUCTURE OF CARD-ONLY PROTEIN IN FROG VIRUS 3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CASPASE RECRUITMENT DOMAIN-ONLY PROTEIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: FROG VIRUS 3; SOURCE 3 ORGANISM_COMMON: FV-3; SOURCE 4 ORGANISM_TAXID: 10493; SOURCE 5 GENE: ORF64R, RUK13GORF64R, SSMEGORF64R; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS APOPTOSIS, DEATH DOMAIN SUPERFAMILY, CASPASE RECRUITMENT DOMAIN, KEYWDS 2 CARD-ONLY PROTEIN, DOMAIN SWAPPING EXPDTA X-RAY DIFFRACTION AUTHOR H.H.PARK,S.KWON REVDAT 3 22-NOV-23 6J52 1 REMARK REVDAT 2 06-MAR-19 6J52 1 JRNL REVDAT 1 20-FEB-19 6J52 0 JRNL AUTH C.M.KIM,H.J.HA,S.KWON,J.H.JEONG,S.H.LEE,Y.G.KIM,C.S.LEE, JRNL AUTH 2 J.H.LEE,H.H.PARK JRNL TITL STRUCTURAL TRANSFORMATION-MEDIATED DIMERIZATION OF CASPASE JRNL TITL 2 RECRUITMENT DOMAIN REVEALED BY THE CRYSTAL STRUCTURE OF JRNL TITL 3 CARD-ONLY PROTEIN IN FROG VIRUS 3. JRNL REF J. STRUCT. BIOL. V. 205 189 2019 JRNL REFN ESSN 1095-8657 JRNL PMID 30625366 JRNL DOI 10.1016/J.JSB.2018.12.006 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (DEV_3139: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.10 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 15157 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.980 REMARK 3 FREE R VALUE TEST SET COUNT : 1513 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.1031 - 5.5640 0.98 1271 147 0.1643 0.1954 REMARK 3 2 5.5640 - 4.4181 1.00 1271 135 0.1414 0.1878 REMARK 3 3 4.4181 - 3.8602 1.00 1260 129 0.1429 0.1791 REMARK 3 4 3.8602 - 3.5075 1.00 1246 139 0.1581 0.2411 REMARK 3 5 3.5075 - 3.2562 1.00 1266 137 0.1745 0.2810 REMARK 3 6 3.2562 - 3.0643 1.00 1227 136 0.1920 0.2566 REMARK 3 7 3.0643 - 2.9109 1.00 1243 141 0.1901 0.2933 REMARK 3 8 2.9109 - 2.7842 1.00 1241 144 0.1906 0.2775 REMARK 3 9 2.7842 - 2.6770 1.00 1230 138 0.1904 0.2747 REMARK 3 10 2.6770 - 2.5847 0.99 1249 136 0.1852 0.2841 REMARK 3 11 2.5847 - 2.5039 0.91 1140 131 0.1824 0.2725 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.280 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2863 REMARK 3 ANGLE : 0.849 3828 REMARK 3 CHIRALITY : 0.043 451 REMARK 3 PLANARITY : 0.004 502 REMARK 3 DIHEDRAL : 6.759 1794 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 49 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.9340 18.8235 30.8040 REMARK 3 T TENSOR REMARK 3 T11: 0.1599 T22: 0.1085 REMARK 3 T33: 0.1478 T12: 0.0212 REMARK 3 T13: 0.0323 T23: 0.0089 REMARK 3 L TENSOR REMARK 3 L11: 0.1250 L22: 0.0488 REMARK 3 L33: 0.2217 L12: -0.0350 REMARK 3 L13: 0.0335 L23: 0.0852 REMARK 3 S TENSOR REMARK 3 S11: 0.1171 S12: 0.1600 S13: 0.0079 REMARK 3 S21: 0.0069 S22: 0.0266 S23: -0.0150 REMARK 3 S31: 0.0200 S32: 0.2054 S33: 0.0131 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 50 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.8576 13.6154 13.3829 REMARK 3 T TENSOR REMARK 3 T11: 0.0805 T22: 0.0203 REMARK 3 T33: 0.1111 T12: 0.0285 REMARK 3 T13: -0.0127 T23: -0.0067 REMARK 3 L TENSOR REMARK 3 L11: 0.1874 L22: 0.1908 REMARK 3 L33: 0.7245 L12: 0.0355 REMARK 3 L13: 0.0836 L23: -0.0169 REMARK 3 S TENSOR REMARK 3 S11: 0.0934 S12: 0.0061 S13: -0.0394 REMARK 3 S21: 0.0225 S22: 0.1896 S23: 0.0274 REMARK 3 S31: -0.0067 S32: -0.0968 S33: 0.1747 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 68 THROUGH 94 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.1853 25.4887 5.6125 REMARK 3 T TENSOR REMARK 3 T11: 0.1933 T22: 0.1540 REMARK 3 T33: 0.1991 T12: 0.0267 REMARK 3 T13: 0.0690 T23: 0.0424 REMARK 3 L TENSOR REMARK 3 L11: 0.0162 L22: 0.0076 REMARK 3 L33: 0.0249 L12: -0.0053 REMARK 3 L13: -0.0085 L23: 0.0020 REMARK 3 S TENSOR REMARK 3 S11: 0.1215 S12: 0.0654 S13: 0.2015 REMARK 3 S21: -0.1233 S22: -0.0958 S23: -0.1360 REMARK 3 S31: -0.0777 S32: -0.0158 S33: 0.0001 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 39 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.3168 20.9077 10.5186 REMARK 3 T TENSOR REMARK 3 T11: 0.1543 T22: 0.1342 REMARK 3 T33: 0.1683 T12: -0.0060 REMARK 3 T13: 0.0281 T23: 0.0053 REMARK 3 L TENSOR REMARK 3 L11: 0.1329 L22: 0.0721 REMARK 3 L33: 0.0663 L12: -0.0698 REMARK 3 L13: -0.0487 L23: 0.0006 REMARK 3 S TENSOR REMARK 3 S11: 0.1743 S12: 0.1519 S13: -0.0239 REMARK 3 S21: -0.0113 S22: -0.0537 S23: -0.0251 REMARK 3 S31: -0.1965 S32: -0.1266 S33: 0.0056 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 40 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.6304 14.6896 24.0295 REMARK 3 T TENSOR REMARK 3 T11: -0.0089 T22: 0.5758 REMARK 3 T33: 0.2405 T12: 0.0298 REMARK 3 T13: 0.0742 T23: 0.2156 REMARK 3 L TENSOR REMARK 3 L11: 0.0037 L22: 0.0237 REMARK 3 L33: 0.0153 L12: -0.0075 REMARK 3 L13: 0.0030 L23: 0.0134 REMARK 3 S TENSOR REMARK 3 S11: -0.0184 S12: -0.0469 S13: -0.0494 REMARK 3 S21: -0.0709 S22: 0.0203 S23: -0.0435 REMARK 3 S31: 0.0399 S32: -0.0312 S33: 0.0141 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 52 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.2134 13.5429 28.5802 REMARK 3 T TENSOR REMARK 3 T11: -0.0947 T22: 0.0192 REMARK 3 T33: 0.0786 T12: -0.1110 REMARK 3 T13: -0.1139 T23: -0.0551 REMARK 3 L TENSOR REMARK 3 L11: 0.0126 L22: 0.1483 REMARK 3 L33: 0.0104 L12: -0.0115 REMARK 3 L13: -0.0081 L23: -0.0106 REMARK 3 S TENSOR REMARK 3 S11: 0.0316 S12: 0.1017 S13: -0.1009 REMARK 3 S21: -0.0193 S22: 0.0997 S23: -0.1305 REMARK 3 S31: 0.0304 S32: 0.0174 S33: 0.1705 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 68 THROUGH 94 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.3266 21.9063 39.4267 REMARK 3 T TENSOR REMARK 3 T11: 0.1603 T22: 0.1484 REMARK 3 T33: 0.1650 T12: 0.0079 REMARK 3 T13: 0.0504 T23: -0.0320 REMARK 3 L TENSOR REMARK 3 L11: 0.0014 L22: 0.0469 REMARK 3 L33: 0.0953 L12: -0.0079 REMARK 3 L13: -0.0121 L23: 0.0728 REMARK 3 S TENSOR REMARK 3 S11: -0.0645 S12: 0.0161 S13: 0.0635 REMARK 3 S21: 0.1448 S22: 0.1638 S23: 0.0813 REMARK 3 S31: -0.1304 S32: 0.0431 S33: 0.0429 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 34 ) REMARK 3 ORIGIN FOR THE GROUP (A): 59.7704 -3.5494 4.6105 REMARK 3 T TENSOR REMARK 3 T11: 0.1854 T22: 0.1075 REMARK 3 T33: 0.1555 T12: -0.0027 REMARK 3 T13: 0.0060 T23: -0.0567 REMARK 3 L TENSOR REMARK 3 L11: 0.0661 L22: 0.0038 REMARK 3 L33: 0.0946 L12: -0.0021 REMARK 3 L13: 0.0561 L23: 0.0237 REMARK 3 S TENSOR REMARK 3 S11: -0.0152 S12: -0.0942 S13: 0.0384 REMARK 3 S21: -0.0816 S22: 0.0846 S23: -0.1957 REMARK 3 S31: 0.0118 S32: -0.0422 S33: 0.0049 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 35 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): 63.1284 -4.1412 18.2689 REMARK 3 T TENSOR REMARK 3 T11: 0.0880 T22: 0.3809 REMARK 3 T33: 0.1179 T12: 0.0144 REMARK 3 T13: -0.1012 T23: -0.1405 REMARK 3 L TENSOR REMARK 3 L11: 0.0640 L22: 0.0426 REMARK 3 L33: 0.0805 L12: -0.0284 REMARK 3 L13: 0.0320 L23: -0.0109 REMARK 3 S TENSOR REMARK 3 S11: -0.0322 S12: 0.0106 S13: -0.0152 REMARK 3 S21: -0.1712 S22: 0.0422 S23: -0.0038 REMARK 3 S31: -0.1143 S32: -0.0184 S33: 0.0046 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 52 THROUGH 89 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.1017 -6.0098 29.7521 REMARK 3 T TENSOR REMARK 3 T11: 0.1259 T22: 0.1305 REMARK 3 T33: 0.1398 T12: 0.0411 REMARK 3 T13: -0.0081 T23: 0.0354 REMARK 3 L TENSOR REMARK 3 L11: 0.0340 L22: 0.0267 REMARK 3 L33: 0.0217 L12: 0.0166 REMARK 3 L13: -0.0062 L23: 0.0257 REMARK 3 S TENSOR REMARK 3 S11: 0.0280 S12: -0.0721 S13: -0.1068 REMARK 3 S21: -0.0366 S22: 0.0826 S23: 0.0192 REMARK 3 S31: -0.0261 S32: -0.0858 S33: 0.0030 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 90 THROUGH 94 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.3359 -10.0067 39.7068 REMARK 3 T TENSOR REMARK 3 T11: 0.1245 T22: 0.1279 REMARK 3 T33: 0.1003 T12: 0.0154 REMARK 3 T13: -0.0261 T23: -0.0011 REMARK 3 L TENSOR REMARK 3 L11: 0.0040 L22: 0.0238 REMARK 3 L33: 0.0356 L12: 0.0081 REMARK 3 L13: -0.0108 L23: -0.0263 REMARK 3 S TENSOR REMARK 3 S11: 0.0210 S12: -0.0011 S13: -0.0059 REMARK 3 S21: -0.0102 S22: -0.0136 S23: -0.0093 REMARK 3 S31: 0.0484 S32: 0.0306 S33: -0.0138 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 1 THROUGH 21 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.9217 -3.2249 34.7261 REMARK 3 T TENSOR REMARK 3 T11: 0.1400 T22: 0.0953 REMARK 3 T33: 0.1187 T12: -0.0106 REMARK 3 T13: 0.0115 T23: 0.0317 REMARK 3 L TENSOR REMARK 3 L11: 0.0218 L22: 0.1077 REMARK 3 L33: 0.0822 L12: -0.0289 REMARK 3 L13: 0.0294 L23: -0.0865 REMARK 3 S TENSOR REMARK 3 S11: -0.1128 S12: -0.0613 S13: 0.0942 REMARK 3 S21: 0.4326 S22: -0.0609 S23: 0.0390 REMARK 3 S31: -0.0534 S32: -0.0232 S33: -0.0235 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 22 THROUGH 49 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.3442 -8.9421 19.9458 REMARK 3 T TENSOR REMARK 3 T11: 0.1194 T22: 0.2469 REMARK 3 T33: 0.1334 T12: 0.0273 REMARK 3 T13: -0.0360 T23: 0.0210 REMARK 3 L TENSOR REMARK 3 L11: 0.0291 L22: 0.0348 REMARK 3 L33: 0.0164 L12: -0.0029 REMARK 3 L13: -0.0054 L23: 0.0185 REMARK 3 S TENSOR REMARK 3 S11: 0.1149 S12: 0.2525 S13: 0.0333 REMARK 3 S21: -0.0890 S22: 0.1297 S23: 0.0472 REMARK 3 S31: 0.0695 S32: -0.0182 S33: 0.0051 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 50 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): 57.6980 2.0296 10.5880 REMARK 3 T TENSOR REMARK 3 T11: 0.1483 T22: 0.0911 REMARK 3 T33: 0.0853 T12: 0.0393 REMARK 3 T13: -0.0111 T23: -0.0143 REMARK 3 L TENSOR REMARK 3 L11: 0.0080 L22: 0.0019 REMARK 3 L33: 0.0075 L12: 0.0005 REMARK 3 L13: 0.0035 L23: 0.0042 REMARK 3 S TENSOR REMARK 3 S11: 0.0005 S12: -0.0369 S13: 0.0463 REMARK 3 S21: 0.0353 S22: 0.0374 S23: -0.0051 REMARK 3 S31: -0.1669 S32: -0.0337 S33: -0.0001 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 68 THROUGH 93 ) REMARK 3 ORIGIN FOR THE GROUP (A): 61.4358 -6.7723 0.1517 REMARK 3 T TENSOR REMARK 3 T11: 0.1660 T22: 0.1744 REMARK 3 T33: 0.1855 T12: -0.0956 REMARK 3 T13: -0.0220 T23: -0.0521 REMARK 3 L TENSOR REMARK 3 L11: 0.0560 L22: 0.0111 REMARK 3 L33: 0.0394 L12: -0.0218 REMARK 3 L13: -0.0425 L23: 0.0246 REMARK 3 S TENSOR REMARK 3 S11: 0.0396 S12: 0.0912 S13: 0.0419 REMARK 3 S21: -0.1516 S22: 0.0256 S23: -0.0868 REMARK 3 S31: 0.0888 S32: 0.0582 S33: 0.0633 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6J52 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-JAN-19. REMARK 100 THE DEPOSITION ID IS D_1300010477. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-NOV-15 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 5C (4A) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9796 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15193 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.10800 REMARK 200 FOR THE DATA SET : 38.0200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.54 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.21600 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1DGN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.5M NACL, 0.1M IMIDAZOLE PH 8.0, REMARK 280 10%(W/V) PEG 3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 30.25000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6450 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10250 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -62.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6580 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -60.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 VAL A 95 REMARK 465 LEU A 96 REMARK 465 GLU A 97 REMARK 465 HIS A 98 REMARK 465 HIS A 99 REMARK 465 HIS A 100 REMARK 465 HIS A 101 REMARK 465 HIS A 102 REMARK 465 HIS A 103 REMARK 465 MET B 0 REMARK 465 VAL B 95 REMARK 465 LEU B 96 REMARK 465 GLU B 97 REMARK 465 HIS B 98 REMARK 465 HIS B 99 REMARK 465 HIS B 100 REMARK 465 HIS B 101 REMARK 465 HIS B 102 REMARK 465 HIS B 103 REMARK 465 MET C 0 REMARK 465 VAL C 95 REMARK 465 LEU C 96 REMARK 465 GLU C 97 REMARK 465 HIS C 98 REMARK 465 HIS C 99 REMARK 465 HIS C 100 REMARK 465 HIS C 101 REMARK 465 HIS C 102 REMARK 465 HIS C 103 REMARK 465 MET D 0 REMARK 465 GLN D 94 REMARK 465 VAL D 95 REMARK 465 LEU D 96 REMARK 465 GLU D 97 REMARK 465 HIS D 98 REMARK 465 HIS D 99 REMARK 465 HIS D 100 REMARK 465 HIS D 101 REMARK 465 HIS D 102 REMARK 465 HIS D 103 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 4 105.93 -161.16 REMARK 500 SER A 49 50.28 -147.19 REMARK 500 PHE C 4 96.47 -171.99 REMARK 500 SER D 49 59.71 -146.59 REMARK 500 REMARK 500 REMARK: NULL DBREF 6J52 A 1 95 UNP W8SPG9 W8SPG9_FRG3V 1 95 DBREF 6J52 B 1 95 UNP W8SPG9 W8SPG9_FRG3V 1 95 DBREF 6J52 C 1 95 UNP W8SPG9 W8SPG9_FRG3V 1 95 DBREF 6J52 D 1 95 UNP W8SPG9 W8SPG9_FRG3V 1 95 SEQADV 6J52 MET A 0 UNP W8SPG9 INITIATING METHIONINE SEQADV 6J52 LEU A 96 UNP W8SPG9 EXPRESSION TAG SEQADV 6J52 GLU A 97 UNP W8SPG9 EXPRESSION TAG SEQADV 6J52 HIS A 98 UNP W8SPG9 EXPRESSION TAG SEQADV 6J52 HIS A 99 UNP W8SPG9 EXPRESSION TAG SEQADV 6J52 HIS A 100 UNP W8SPG9 EXPRESSION TAG SEQADV 6J52 HIS A 101 UNP W8SPG9 EXPRESSION TAG SEQADV 6J52 HIS A 102 UNP W8SPG9 EXPRESSION TAG SEQADV 6J52 HIS A 103 UNP W8SPG9 EXPRESSION TAG SEQADV 6J52 MET B 0 UNP W8SPG9 INITIATING METHIONINE SEQADV 6J52 LEU B 96 UNP W8SPG9 EXPRESSION TAG SEQADV 6J52 GLU B 97 UNP W8SPG9 EXPRESSION TAG SEQADV 6J52 HIS B 98 UNP W8SPG9 EXPRESSION TAG SEQADV 6J52 HIS B 99 UNP W8SPG9 EXPRESSION TAG SEQADV 6J52 HIS B 100 UNP W8SPG9 EXPRESSION TAG SEQADV 6J52 HIS B 101 UNP W8SPG9 EXPRESSION TAG SEQADV 6J52 HIS B 102 UNP W8SPG9 EXPRESSION TAG SEQADV 6J52 HIS B 103 UNP W8SPG9 EXPRESSION TAG SEQADV 6J52 MET C 0 UNP W8SPG9 INITIATING METHIONINE SEQADV 6J52 LEU C 96 UNP W8SPG9 EXPRESSION TAG SEQADV 6J52 GLU C 97 UNP W8SPG9 EXPRESSION TAG SEQADV 6J52 HIS C 98 UNP W8SPG9 EXPRESSION TAG SEQADV 6J52 HIS C 99 UNP W8SPG9 EXPRESSION TAG SEQADV 6J52 HIS C 100 UNP W8SPG9 EXPRESSION TAG SEQADV 6J52 HIS C 101 UNP W8SPG9 EXPRESSION TAG SEQADV 6J52 HIS C 102 UNP W8SPG9 EXPRESSION TAG SEQADV 6J52 HIS C 103 UNP W8SPG9 EXPRESSION TAG SEQADV 6J52 MET D 0 UNP W8SPG9 INITIATING METHIONINE SEQADV 6J52 LEU D 96 UNP W8SPG9 EXPRESSION TAG SEQADV 6J52 GLU D 97 UNP W8SPG9 EXPRESSION TAG SEQADV 6J52 HIS D 98 UNP W8SPG9 EXPRESSION TAG SEQADV 6J52 HIS D 99 UNP W8SPG9 EXPRESSION TAG SEQADV 6J52 HIS D 100 UNP W8SPG9 EXPRESSION TAG SEQADV 6J52 HIS D 101 UNP W8SPG9 EXPRESSION TAG SEQADV 6J52 HIS D 102 UNP W8SPG9 EXPRESSION TAG SEQADV 6J52 HIS D 103 UNP W8SPG9 EXPRESSION TAG SEQRES 1 A 104 MET MET GLN ASN PHE GLY ALA GLN GLU MET ARG LYS GLY SEQRES 2 A 104 ARG LEU ALA PHE VAL ARG LEU SER LYS LEU GLU THR LEU SEQRES 3 A 104 GLN ASN LEU ILE ASP LYS MET LEU ALA GLU ARG VAL PHE SEQRES 4 A 104 ASN LYS GLY GLU ALA ALA ASP ILE LEU GLU SER ASN ASP SEQRES 5 A 104 ILE ARG ALA ASP ILE ALA ARG ALA LEU ILE ASP SER VAL SEQRES 6 A 104 THR LYS LYS GLY ASP VAL ALA CYS SER LEU PHE ALA GLY SEQRES 7 A 104 ALA ILE ALA ARG GLN ASP VAL VAL LEU ALA ASP ALA MET SEQRES 8 A 104 GLY ILE SER GLN VAL LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 104 MET MET GLN ASN PHE GLY ALA GLN GLU MET ARG LYS GLY SEQRES 2 B 104 ARG LEU ALA PHE VAL ARG LEU SER LYS LEU GLU THR LEU SEQRES 3 B 104 GLN ASN LEU ILE ASP LYS MET LEU ALA GLU ARG VAL PHE SEQRES 4 B 104 ASN LYS GLY GLU ALA ALA ASP ILE LEU GLU SER ASN ASP SEQRES 5 B 104 ILE ARG ALA ASP ILE ALA ARG ALA LEU ILE ASP SER VAL SEQRES 6 B 104 THR LYS LYS GLY ASP VAL ALA CYS SER LEU PHE ALA GLY SEQRES 7 B 104 ALA ILE ALA ARG GLN ASP VAL VAL LEU ALA ASP ALA MET SEQRES 8 B 104 GLY ILE SER GLN VAL LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 C 104 MET MET GLN ASN PHE GLY ALA GLN GLU MET ARG LYS GLY SEQRES 2 C 104 ARG LEU ALA PHE VAL ARG LEU SER LYS LEU GLU THR LEU SEQRES 3 C 104 GLN ASN LEU ILE ASP LYS MET LEU ALA GLU ARG VAL PHE SEQRES 4 C 104 ASN LYS GLY GLU ALA ALA ASP ILE LEU GLU SER ASN ASP SEQRES 5 C 104 ILE ARG ALA ASP ILE ALA ARG ALA LEU ILE ASP SER VAL SEQRES 6 C 104 THR LYS LYS GLY ASP VAL ALA CYS SER LEU PHE ALA GLY SEQRES 7 C 104 ALA ILE ALA ARG GLN ASP VAL VAL LEU ALA ASP ALA MET SEQRES 8 C 104 GLY ILE SER GLN VAL LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 D 104 MET MET GLN ASN PHE GLY ALA GLN GLU MET ARG LYS GLY SEQRES 2 D 104 ARG LEU ALA PHE VAL ARG LEU SER LYS LEU GLU THR LEU SEQRES 3 D 104 GLN ASN LEU ILE ASP LYS MET LEU ALA GLU ARG VAL PHE SEQRES 4 D 104 ASN LYS GLY GLU ALA ALA ASP ILE LEU GLU SER ASN ASP SEQRES 5 D 104 ILE ARG ALA ASP ILE ALA ARG ALA LEU ILE ASP SER VAL SEQRES 6 D 104 THR LYS LYS GLY ASP VAL ALA CYS SER LEU PHE ALA GLY SEQRES 7 D 104 ALA ILE ALA ARG GLN ASP VAL VAL LEU ALA ASP ALA MET SEQRES 8 D 104 GLY ILE SER GLN VAL LEU GLU HIS HIS HIS HIS HIS HIS FORMUL 5 HOH *13(H2 O) HELIX 1 AA1 GLY A 5 GLY A 12 1 8 HELIX 2 AA2 GLY A 12 SER A 20 1 9 HELIX 3 AA3 LYS A 21 GLU A 35 1 15 HELIX 4 AA4 ASN A 39 GLU A 48 1 10 HELIX 5 AA5 SER A 49 LYS A 67 1 19 HELIX 6 AA6 GLY A 68 ASP A 83 1 16 HELIX 7 AA7 ASP A 83 GLY A 91 1 9 HELIX 8 AA8 GLY B 5 GLY B 12 1 8 HELIX 9 AA9 GLY B 12 SER B 20 1 9 HELIX 10 AB1 LYS B 21 GLU B 35 1 15 HELIX 11 AB2 ASN B 39 SER B 49 1 11 HELIX 12 AB3 ASP B 51 LYS B 67 1 17 HELIX 13 AB4 GLY B 68 ASP B 83 1 16 HELIX 14 AB5 ASP B 83 MET B 90 1 8 HELIX 15 AB6 GLY C 5 GLY C 12 1 8 HELIX 16 AB7 GLY C 12 SER C 20 1 9 HELIX 17 AB8 LYS C 21 GLU C 35 1 15 HELIX 18 AB9 ASN C 39 SER C 49 1 11 HELIX 19 AC1 ASP C 51 LYS C 67 1 17 HELIX 20 AC2 GLY C 68 ASP C 83 1 16 HELIX 21 AC3 ASP C 83 MET C 90 1 8 HELIX 22 AC4 GLY D 5 GLY D 12 1 8 HELIX 23 AC5 GLY D 12 SER D 20 1 9 HELIX 24 AC6 LYS D 21 GLU D 35 1 15 HELIX 25 AC7 ASN D 39 GLU D 48 1 10 HELIX 26 AC8 SER D 49 LYS D 67 1 19 HELIX 27 AC9 GLY D 68 ASP D 83 1 16 HELIX 28 AD1 ASP D 83 GLY D 91 1 9 CRYST1 46.657 60.500 78.836 90.00 89.82 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021433 0.000000 -0.000066 0.00000 SCALE2 0.000000 0.016529 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012685 0.00000